TCONS_00049793 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049793
Unique NameTCONS_00049793
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1861

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049793 ID=TCONS_00049793|Name=TCONS_00049793|organism=Clytia hemisphaerica|type=transcript|length=1861bp
aaaaaaagaaacaaacaacaaaaacatgGGTACTGGATGAGGTGTAATGT
GAATatttaaaataaacaaatcaCAAACTCCAAAAATGTCATCTTTTTGG
AGTAAGCTGTTTAAGCCAGCTGCAAAGAATAAGGTTTATAAGTACCTTAC
AAAAGGGGTCGATCCGAATGAAATATGGGAAATCTGTGGTGAACTCGGAG
ATGGAACTTTTGGCAAAGTATACAAGGCCAAGCGGAAGAGCGATGGGGCA
CTGACAGCTGCAAAGATTGTGGACATAAAGAATGAACAGGATCTTGATGA
CTTTATGGTGGAGATTGACATCTTAGCAGAATGCAAACATAAATATGTTG
TCAATCTATTTGAAACGTATTACTTTGAGGACAAGCTATGGATGATGTTA
GAATTCTGTCCAGGAGGTGCAATGGATGATATTATTTTAGatcTTGAAAG
AGGTTTGGATGAAACTACAATTAAAAGTCTTTGTCGACAAATGGTTGAGG
GTTTGGCGTTTCTTCATTCATGTGGAGTCATTCACCGTGATTTGAAAGCT
GGCAATGTCCTTTTAACTGAAACTGGTGATATCAAACTTGCTGATTTTGG
AGTATCTGCCAAATGTAAGACTGCTCAAGGAAGAAGAAACACCTTTATTG
GAACACCTTACTGGATGGCACCTGAAGTTGTTGTCACAGAAACGATGCAT
GATGAAACGTATGATAATAAGGCTGATGTATGGAGTTTAGGGATCACGCT
GATTGAATTTGCAGAGATGCAACCACCGAGCCATGAAATGCATCCCATGA
GAGTACTAATGAGAATCACAAAATCGGATCCACCTACACTTCAACACCGC
AAAAAATGGTCAGCGGATTTCCACAATTTTCTTGCGGTTTGTGTGAATAA
AGATCCGAACCAAAGACCAAGTATGGAAGAACTTCTTGAACATCCCTTCA
TACGAGACGTCAAAGACACACAGCCAGTGATCGATTTGTATCGCGAAGCT
AAAGCTGAGGTTGTTGAAACGCTGGATGACTTGCCAGAAGATTCTGATGG
CAGCTTCGTTGAAATTTCGACTCCCAAATTGGAAAAATCTACTTCAAGCC
ACACACTTGACAGCTGTAGTATAATATCTGAAGAAAGCGATTCAAGTCCC
AAAGATTCTTCGACATCTACGGGTAGTGCTATTCCGCCTATGCCCATCAG
AAAGATGAAAGATCTCACTGGAGACACTAACTTAAACGAAGATAAAGACA
AATTCCCTAAAAGTGAAGTCAAGAAAGACATTCCCAAACAACCGCAGAGT
CCTGAATTAACAGGCTTCAAAGAAACAGGAGACAAGGCACCGCAGAGTCC
TTCAGAGCAAACTCTCACAAAAGAAGAACTCAAAAATCGTGAATTGGAGA
AAGTTCAAAAGGAATACGCTGAGAAACAGAAACATGAAAAAGAGAAGGGT
GGAACGCCTTCCGAAACGCCCCACCCGCCAGCCACGCCCACGGAAACAGA
CTCAGCTTCGATCGCAAGTAGTGCATCATCAAGGAAATCCTTAGGTGAAG
AAAAGAAGCCTTCTGATAAGCTAGCTGGACTAGCCTCGTTGACAGCTGAC
TTGAAAGCAGTTGAAGGAGAGGCTAAAGCACAAATGAAGGTTCCGGTTGA
GGGCGACAAAGGTAACAAACAGTATAAAACGTTGACTCGCGTTCGACAGT
ACGAAAAAGACGGTAAAATGGTTACCGAAACTGTCCAACGTATTGTGGAT
GTGTCGAGTGAAGATTTCCGCGCGGCCGCTAAGAAGGAACAACAATTAAG
AAAATTGGCATTACAAGAGATGAAAGCTTTACGTCGCGAAGAGCAGAAAC
AAGGAGCTGAA
Run BLAST on NCBI

transcript from alignment at scaffold_166:531433..539512+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049793 ID=TCONS_00049793|Name=TCONS_00049793|organism=Clytia hemisphaerica|type=transcript|length=8080bp|location=Sequence derived from alignment at scaffold_166:531433..539512+ (Clytia hemisphaerica)
aaaaaaagaaacaaacaacaaaaacatgGGTACTGGATGAGGTGTAATGT GAATatttaaaataaacaaatcaCAAACTCCAAAAATGTCATCTTTTTGG AGTAAGCTGTTTAAGCCAGCTGCAAAGAATAAGGTTTATAAGTACCTTAC AAAAGGGGTCGATCCGAATGAAATATGGGAAATCTGTGGTGAACTCGGAG ATGGAACTTTTGGCAAAGTATACAAGgtaaaaatattcttgaatttcttt tgttttaatttttaaaactagTGTATATGAGAAGTTACTATTACAGGTTT CTATCATTATATCGAGTGTTTTAACTGTTTTTGTGAGctcttaaattgaa aaaaaaaacatctaaagACCTATCGTAAAGCTTATATCATCGCATGAGAA ATAAAGAGACTTGTctcctatttttcgaaaaatgagaCAATGATTGATCC ATATTCTTCAGAAAAAATTCTTGGAGTTAAACGGACCTAAATCCATGAGG TTTGACTTTTTGGCCTTAAATTTGGATATTATCTCTATTTTTTAATGGAT TGCAGAtttgaacaaattatataaaagaCAGCCCTAAATACAAAGTAAAA AGActtaaatccattttttataTGTAAAGTAATAGGTaacaaaattaaca attttGAGAAGTAAAAAGATTTATATCCATTTTCTGGAGATAAAGtcttt ttatttctaaatttttaaatgCTAATTATctcaaaacaaggaaaatggAG ACAAGTCTCTTTATTTCTCATGCAACGATATACACAAAAAGTAATTGTAT TTATTTGGAGGCTTTAACTGATTATGATCATTTTTATaatgtttaaaaaa gttagagaatgataaagaagtaatgtTAACAAGAATTAATACTTTAAACA GATGATCACAAATTTTACCTTCTTCTAGGCCAAGCGGAAGAGCGATGGGG CACTGACAGCTGCAAAGATTGTGGACATAAAGAATGAACAGGATCTTGAT GACTTTATGGTGGAGATTGACATCTTAGCAGAATGCAAACATAAATATGT TGTCAATCTATTTGAAACGTATTACTTTGAGGACAAGCTATGGGTGggtg tttatattttttaagtctTTGTATGGAAATTTTGTTACATAAGATATGTA Agatgttttttatcaaattagtttttagtattgatttgatattgaaaaaa atatctatGAATTTACCCTTTTTATGTTccaatgtccctttaaaattaAT GACACCATTTCAATAAGTATTTTTGATCTTCCTCAGATGATGTTAGAATT CTGTCCAGGAGGTGCAATGGATGATATTATTTTAGGTGAGTTCAATAGAA TGTCCTGATTTTTTAATGTTTGGTGAGAAAATCTTGTAGTGAAAATCTAG TCATCTGAGTCACTCTGACTCGAtcccattttcatttttttcttcttctt tgtccTCTTTGTCATTTCTTTTTACCTTTTAAAACTCTTATTTTTGTACC TGGTGCATTTTAcgtttcaattttgaaaatgggaatgaataaatatttat tttagatcTTGAAAGAGGTTTGGATGAAACTACAATTAAAAGTCTTTGTC GACAAATGGTTGAGGTAAGTGCTATGTTCACATTCTTTGGGAATTGTTAT TAAGGGTTATTGTTATGCTGCTTGatcctaaatttcttttttattatgat TAGTGTCACACTTTTGAAAAGCACTTTGTaagttaaatattttcagaaaG CTAACCCTAAGTTCCCCAAAACCAAAGCcaaatctttttctttgttcagT CCACACCTTATGTATCATGGGGGgagtactaaaatctcagacatcatgat GTTAAGTGGTGTGCTGGTTTGCCATTGGGtactaaaatacaaaaatatat agGTATACAGGGAAATTCTTTTAGTACATTGATACATTGATAATAATATG TGACCATCCAAGCGATTCAAAGGACATGAAATTCTTGCGATACTTACTGT AATTGATGGATTGCCAGACTCAACAAGAGTGTTAGCAGCAAGATGCCGAT AGTTTTGCCGGTATCAAGCTGGAAGATTTTTAtgtacttaaaatcgcttg cAGATTCgcatattatattttttttcgctttgaggtatgtaaaaaaaaaa agtctttttttagtACTGACTCCTATGTTTGTACATTGAAGATAAATTCT GTCTACTGTCTAGTATACAGTATATAATGATACTTTCTGTTAACTCTAGG GTTTGGCGTTTCTTCATTCATGTGGAGTCATTCACCGTGATTTGAAAGCT GGCAATGTCCTTTTAACTGAAACTGGTGATATCAAACTTGGTAAGGTGTA GAATCAACTTCTAAAGAGTTTTGTAACAAAATAGGTAAAAGGTAGCCATT CAGTAATTTCAGTTATCTTTTTAGTTAATTTTTTCAAGACAGTATTCCCT TCTGTATTTGACAAATTAATTCTGTTTATAAACATTCCAATTAGCTAGAA AGTAAAGACAATTTTCTTCACATTTTTCAGCTGATTTTGGAGTATCTGCC AAATGTAAGACTGCTCAAGGAAGAAGAAACACCTTTATTGGAACACCTTA CTGGTAACTTATATTTGTTTAACATTGACTtcagattttattttttatga gatagtcAGGTTACGTATGCTTACAAAGCAGAATATTGATAAAGGCTTCC TCAAAATTTGTGATCGTTCGGCGCGGGGAGGACGTTCTTTcttcaaaaaa gtttaacgtgTACTGAATTTTTCTacaagaatttttaaatttttgattct AGCTTTTTAATAATAACCGTTTGGAAATTGCTAATCATTTTTAAGTGCAC CATTTCTTCGATTTATTTTGACTATTTTACTGTATTTTGCTGTGTAGGAT GGCACCTGAAGTTGTTGTCACAGAAACGATGCATGATGAAACGTATGATA ATAAGGTAATAATTGTTTTATGTCAAAGAACTGTTAGGTTATCACTGCAC AGTGAAGAAAGGCACGactttttttgtaagatttttttgTAAGATAGTAT TTGCATTGATGTAAAGATCTGAAAATCTgaaagattttgatgaaattgat gatgaaataataattttccTGAACTAAAATCATTTGCAGGAGTGAGAAGA AGGCATTACTGCCTTTTCACCTCTAACCTCtttgataatttataatataa CTTATGCAACTACTTTTACTGTTCAAATATGAATTGCTTTGGATTAAATC CCAGTATAATTTCTTTCCCACTTACCATCTATATAAGGGATGTTTTTTCC CATTCTTAATGAGTTTGTTCACTGCTTTATTTTTACTCTAagtttaattg aaattttttctacAGGCTGATGTATGGAGTTTAGGGATCACGCTGATTGA ATTTGCAGAGATGCAACCACCGAGCCATGAAATGCATCCCATGAGAGTAC TAATGAGAATCACAAAATCGGATCCACCTACACTTCAACACCGCAAAAAA TGGTAATCTATAATTACTGTATATGTCTGTCTCGGACAGATTTCCGCCTC AGCGAGATACGGAATTggctctctttaattcgatcttcaagaggccgaaa attttattcgaatcagataaagattcgaataacagagagtaatttaaacc acttcgaagctgaggggaccaataatTATAGTTCGGATTANttcttgagg tccctttctcctggaaaaaactatctgttctgtatcctgggctctcctgg attatatcatctgttctgggaaaaaatgggactcctggaaaatgtttatt tgttctctagaaatattatgctcctggaaaaatataacagctattctcta agaaaattaaaatgctcctagaaaatgagacctgtAAGAAGattatgaag ctccctggaaaaaaatctggcatctggttgcgtttttcacaatttagctc ctggattttttaaacagattgtccgctggaaaattttatgtgtttttcct taaaatgtgctcgaaaatgtgctcctggattttaagaacagatgtcttta aggcgacccctggattttacctggNgtttaattgaaattttttctacAGG CTGATGTATGGAGTTTAGGGATCACGCTGATTGAATTTGCAGAGATGCAA CCACCGAGCCATGAAATGCATCCCATGAGAGTACTAATGAGAATCACAAA ATCGGATCCACCTACACTTCAACACCGCAAAAAATGGTAATCTATAATTA CTGTATATGTCTGTCTCGGACAGATTTCCGCCTCAGCGAGATACGGAATT ggctctctttaattcgatcttcaagaggccgaaaattttattcgaatcag ataaagattcgaataacagagagtaatttaaaccacttcgaagctgaggg gaccaataatTATAGTTCggattacagaaagatttgaattagagagaatt GACTTTACAAAAGAGGTTTTCCGTTtccaaattcaataaaaatctgcaaa aatttaaaagatcttGTTTAACTGATTGTTTAAAGTCCATCTCCGTCTTC GACAAGAAACTTTGCTTTGGCTACTGAATTTGTAACCCTTCTATTTCTAC CTACTTTTTGTTCTACAAATTCATTTGACCGGTTCCTCTGACCCGGTTGA GAAACTTTCCATAGCTTTACACAGCTCTTTAAACCATGTTCTAACAACTC ATCAGTGATATCAAATCAGGATTTTCCATAGGTCCgattcaaaaaaagtt aaacaagtACTCCATCGTCTTATTTCATCATCTctgaatttcttcttctt ttttgttcGACAGGTCAGCGGATTTCCACAATTTTCTTGCGGTTTGTGTG AATAAAGATCCGAACCAAAGACCAAGTATGGAAGAACTTCTTGAAGTAAG TGTCTTACTGAATATTGCACATATCATATTCCTTACTGATTGAGAGGAAG TTTCTTCAGATGGAATTTAAGTCAGCGAATGgcttgaaaaattcaatttg gcagatgcaggatatttttggccacaAAACGCTATTATGTATTAAATAAG AGAAAACttgttttaagccttaaatAGCACACATCTGGgaaatacaatac aatacaataatTTTTATTAAGGCGGATTTTGTCCAAATccgcaaaaaaac ttttccgtaaaaatttcttcccttaaggtactttttttgtttcttttgta tACTGATATTAATAaacaactgaaatattctttcttTCTTCGCATTCGAA CCCAAAATCCTCCACTTTACAAACCATCTCAGTTTTAACCTTAAAAGGGC TGACTGGTTATCCGGGTATCGGACCTTTGTCTTTCGGTATTCCGATGttc gaaagaaaaattactaccgggtgtcccagaaaaaagtccccttttttgaa gtgaattttctccaGTTCTATAAACTGTTAACGAATCAATCCATTTTGCA TTGGAAtgaggaaggataaacttaaattttgaggggtagtttgtcaaatt tggtcacCTATATCAAAAGTTGTAGTCTAAATGCCaaaacattacttttc aaaaaagtctaaaaaaggcGAAAAATTAGAGCCATCGCACCCTACCCACT TCATGAATAGACTCCTGGTTAGTTTTTAAGTGATTGTATTGAAATGACAG AGCCAATAATAACTTATTCTGGCTAAATTCGACATTCAAAGCCAGAGATG TATCATTTATAATGTCTATTATCCTTATAGCATCCCTTCATACGAGACGT CAAAGACACACAGCCAGTGATCGATTTGTATCGCGAAGCTAAAGCTGAGG TTGTTGAAACGCTGGATGACTTGCCAGAAGATTCTGATGGCAGCTTCGTA AGTCTTCATTGTTGTTTAGATTGTTTTTCTTTACTCCAAACCATGCTATC GATTTGATATTGAAATACAATTTTATGTACATTAGACAGTTTTTAGCAAA ATTCAGTGGTCTCATTTTTATTGTATACGCCGTTCAACCCTTTCTGGCGG TGCGACCAACTGGTCAGGAAACTGGTAACAAGAGtacatgaaaaattatt tttgataacgGTATTGAAAACATAAGCGTAGAAAAAGGCTCTTGTGATAG ATGTAAGATACCCTTGCTAGCATGCTCTTCATCGCTGAGAAGTGCATATC TTACATGGAATTTTCTTGGCTCGTTTGCGCTGAGAATAATTCTCCTTTAA GTTCATTACCAGTCCCCTAAAAACCGACCGCCGTCAAGGGTGGATACGAT TACCTCAATTCAATGGGGAGGGTCATTTAATTGAATAATCTTTATTTTTA CGTATTAGATGAATTTGGAAATGCTATGattcgaaagaaaaattaagtga GGGATTATTTTCATTATATTATAGGTTGAAATTTCGACTCCCAAATTGGA AAAATCTACTTCAAGCCACACACTTGACAGCTGTAGTATAATATCTGAAG AAAGCGATTCAAGTCCCAAAGATTCTTCGACATCTACGGGTAGTGCTATT CCGCCTATGCCCATCAGAAAGATGAAAGATCTCACTGGAGACACTAACTT AAACGAAGATAAAGACAAATTCCCTAAAAGTGAAGTCAAGAAAGACATTC CCAAACAACCGCAGAGTCCTGAATTAACAGGCTTCAAAGAAACAGGAGAC AAGGCACCGCAGAGTCCTTCAGAGCAAACTCTCACAAAAGAAGAACTCAA AAATCGTGAATTGGAGAAAGTTCAAAAGGAATACGCTGAGAAACAGAAAC ATGAAAAAGAGAAGGGTGGAACGCCTTCCGAAACGCCCCACCCGCCAGCC ACGCCCACGGAAACAGACTCAGCTTCGATCGCAAGTAGTGCATCATCAAG GAAATCCTTAGGTGAAGAAAAGAAGCCTTCTGATAAGCTAGCTGGACTAG CCTCGTTGACAGCTGACTTGAAAGCAGTTGAAGGAGAGGCTAAAGCACAA ATGAAGGTTCCGGTTGAGGTATGTAAATTATACTGTATTGCATCTTTAGA CTACCACAAGGAAAATGGAATTTTACAGACGGACATTTATAGAGGCAAAC TCGGTCATATAATTTCTGGTTTACTAGCATTAGAAGGCACCTGTCATTAA CATAAACTGTTATGTTGGTGGAACTCGATTTGCTTCTTACCTTAAACCGC ATTACTTTGGAAAACGAGTGTTTATTAAGAATTATTTGGTTTCTAGGATG GacgtttattcgaagggggGGCGTTTTTTCAAGGGTATGTTTATTCGAAA TAATACGTTATCCATTTTTCTTCAGGGCGACAAAGGTAACAAACAGTATA AAACGTTGACTCGCGTTCGACAGTACGAAAAAGACGGTAAAATGGTTACC GAAACTGTCCAACGTATTGTGGATGTGTCGAGTGAAGATTTCCGCGCGGC CGCTAAGAAGGAACAACAATTAAGGTATGTTTTGTACATATGGTTAAAAA ATGTATCGACATTGGAAAATATTACCTTAAAAATGACATGTTGCGTCAGG CTAAGCTCACAAagtatacaattttttttgttgaatcgTTTATTTTGTGT GAGTTCTGCTGTAGACCGTTTGGCCGGGAGACCGTTTGGCCGGGAGAAAC GTaaaggaaaaaaggaagaaacgaAGCAGTTTGATAAGATCAAAATAAAC CTATCGGTATTATTATACCTGCAAAGGAAGGTTTCatagttcggaccccc ccccctttcttaaggggggatgacaccttccaaaaaagtgaagaaggggg ggtcagaaattttcactaaaaaggggGGGGTAGCAAGGAGGGGAggtcgt ttaagaaggggggctatatattgtagattattttccagcactgttatgaa atttggtctgcatgacaggaagttctttattttcactaaaaattatattt gccagacttaatttttctttactttttcccttccctttttaccataaaaa atttagcccgaaacccttgggggatagCCATTTATACATACCTTTATATC TGTATCTTCCTTCTTCTAGAAAATTGGCATTACAAGAGATGAAAGCTTTA CGTCGCGAAGAGCAGAAACAAGGAGCTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031564XLOC_031564Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049793-exon-scaffold_166-1491911889:531433..531658TCONS_00049793-exon-scaffold_166-1491911889:531433..531658Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:531433..531658TCONS_00049793-exon-scaffold_166-1510915933:531433..531658Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:531433..531658TCONS_00049793-exon-scaffold_166-1575043694:531433..531658Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:532361..532525TCONS_00049793-exon-scaffold_166-1491911889:532361..532525Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:532361..532525TCONS_00049793-exon-scaffold_166-1510915933:532361..532525Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:532361..532525TCONS_00049793-exon-scaffold_166-1575043694:532361..532525Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:532719..532767TCONS_00049793-exon-scaffold_166-1491911889:532719..532767Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:532719..532767TCONS_00049793-exon-scaffold_166-1510915933:532719..532767Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:532719..532767TCONS_00049793-exon-scaffold_166-1575043694:532719..532767Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:532988..533046TCONS_00049793-exon-scaffold_166-1491911889:532988..533046Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:532988..533046TCONS_00049793-exon-scaffold_166-1510915933:532988..533046Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:532988..533046TCONS_00049793-exon-scaffold_166-1575043694:532988..533046Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:533682..533772TCONS_00049793-exon-scaffold_166-1491911889:533682..533772Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:533682..533772TCONS_00049793-exon-scaffold_166-1510915933:533682..533772Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:533682..533772TCONS_00049793-exon-scaffold_166-1575043694:533682..533772Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:533963..534035TCONS_00049793-exon-scaffold_166-1491911889:533963..534035Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:533963..534035TCONS_00049793-exon-scaffold_166-1510915933:533963..534035Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:533963..534035TCONS_00049793-exon-scaffold_166-1575043694:533963..534035Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:534330..534387TCONS_00049793-exon-scaffold_166-1491911889:534330..534387Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:534330..534387TCONS_00049793-exon-scaffold_166-1510915933:534330..534387Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:534330..534387TCONS_00049793-exon-scaffold_166-1575043694:534330..534387Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:534798..534909TCONS_00049793-exon-scaffold_166-1491911889:534798..534909Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:534798..534909TCONS_00049793-exon-scaffold_166-1510915933:534798..534909Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:534798..534909TCONS_00049793-exon-scaffold_166-1575043694:534798..534909Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:535644..535668TCONS_00049793-exon-scaffold_166-1491911889:535644..535668Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:535644..535668TCONS_00049793-exon-scaffold_166-1510915933:535644..535668Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:535644..535668TCONS_00049793-exon-scaffold_166-1575043694:535644..535668Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:536246..536327TCONS_00049793-exon-scaffold_166-1491911889:536246..536327Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:536246..536327TCONS_00049793-exon-scaffold_166-1510915933:536246..536327Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:536246..536327TCONS_00049793-exon-scaffold_166-1575043694:536246..536327Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:537163..537279TCONS_00049793-exon-scaffold_166-1491911889:537163..537279Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:537163..537279TCONS_00049793-exon-scaffold_166-1510915933:537163..537279Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:537163..537279TCONS_00049793-exon-scaffold_166-1575043694:537163..537279Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:537807..538400TCONS_00049793-exon-scaffold_166-1491911889:537807..538400Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:537807..538400TCONS_00049793-exon-scaffold_166-1510915933:537807..538400Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:537807..538400TCONS_00049793-exon-scaffold_166-1575043694:537807..538400Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:538708..538856TCONS_00049793-exon-scaffold_166-1491911889:538708..538856Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:538708..538856TCONS_00049793-exon-scaffold_166-1510915933:538708..538856Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:538708..538856TCONS_00049793-exon-scaffold_166-1575043694:538708..538856Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1491911889:539452..539512TCONS_00049793-exon-scaffold_166-1491911889:539452..539512Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1510915933:539452..539512TCONS_00049793-exon-scaffold_166-1510915933:539452..539512Clytia hemisphaericaexon
TCONS_00049793-exon-scaffold_166-1575043694:539452..539512TCONS_00049793-exon-scaffold_166-1575043694:539452..539512Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_166supercontigscaffold_166:531433..539512 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.42066 1.32845 4.54769 0.637026 0.0987865 1.27356 1.57676e-08 1.34064 3.99638 6.59711 1.14471 4.06406 3.48694 7.48165 3.18507 4.16841 3.3219 5.63284 0.00153435 4.35361 8.34818 5.22533 1.16224 1.55899 1.74371 3.67654 3.74912 3.14574 2.35266 3.35977
Blast
BLAST of TCONS_00049793 vs. Swiss-Prot (Human)
Match: STK10 (Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 4.263e-127
Identity = 176/300 (58.67%), Postives = 234/300 (78.00%), Query Frame = 2
Query:  125 KNKVYKYLTKGVDPNEIWEICGELGDGTFGKVYKAKRKSDGALTAAKIVDIKNEQDLDDFMVEIDILAECKHKYVVNLFETYYFEDKLWMMLEFCPGGAMDDIILDLERGLDETTIKSLCRQMVEGLAFLHSCGVIHRDLKAGNVLLTETGDIKLADFGVSAKCKTAQGRRNTFIGTPYWMAPEVVVTETMHDETYDNKADVWSLGITLIEFAEMQPPSHEMHPMRVLMRITKSDPPTLQHRKKWSADFHNFLAVCVNKDPNQRPSMEELLEHPFIRDVKDTQPVIDLYREAKAEVVETL 1024
            K++ Y+++ + +DPNE+WEI GELGDG FGKVYKAK K  GAL AAK+++ K+E++L+D++VEI+ILA C H Y+V L   YY + KLW+M+EFCPGGA+D I+L+L+RGL E  I+ +CRQM+E L FLHS  +IHRDLKAGNVL+T  GDI+LADFGVSAK      +R++FIGTPYWMAPEVV+ ETM D  YD KAD+WSLGITLIE A+++PP HE++PMRVL++I KSDPPTL    KWS +F +FL + ++K+P  RPS  +LLEHPF+  +   + + +L  EAKAEV+E +
Sbjct:   19 KSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVMEEI 318          
The following BLAST results are available for this feature:
BLAST of TCONS_00049793 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STK104.263e-12758.67Serine/threonine-protein kinase 10 OS=Homo sapiens... [more]
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