TCONS_00049697 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049697
Unique NameTCONS_00049697
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1500

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049697 ID=TCONS_00049697|Name=TCONS_00049697|organism=Clytia hemisphaerica|type=transcript|length=1500bp
NNttacttaaTTTCCTAGATCTGGAACCAAGTAAGGCGGCATTTTACGCA
AACAGATCGGCTGCATTAATGATGGTGGAAGAGTTCAACAAAGCACTTGA
AGATGCTCGAAAAGCCTTCAATTTGGATAACAAGTTTATCAAAGCATACT
TAAGAGCAGCCAAGTGTTATATTGCCACTGGACAGACTAATAATGCAATG
ATGACACTACAAAAGGCCAAAACGCTTGAACCAACCAATAAATCAGTATT
GAGTGAGctgaaaaatgttcaaataaTGGCGGATTACGAAAACCAAAGTG
CGAATGCTTTTGAAATCAAGGATTACCGTAAAATCGAGTTTTGCATGCGT
AAGCTTTTGGAATATGCACCAAGTTGTTTGGGCTACAAAGGATTACAGGC
AGAGTGTATGGCCATGACTGGAAAGTATAGTGATGCTCAAATCCTTGCTA
ATGACATTTTGCGCAAAGATCAGCACCATTCCGAGGCTCTATATGTTCGT
GGCTTATGCTTGTATTATCAGGATCAAACAGAGAGAGCTTACAAATTGTT
TCAACAACTGCTTAGAACTGCTCCGGACTTCAAAAAAGCTAGAGAAGCTT
ACAAGAAAGCAAAGAATTTGGAAGCAACGAAAGAGGAAGGAAACAAAGCT
TTCCGAGGTGGAGACTACCAGGAAGCATTGAGGCTGTACACAAAAGCTTT
AGAGATCGACCCTATTAACAAATCTACAAACTCCAAATTATATTGCAACA
GAGCCACAGTtaatttcaaactaaaaaaaatggaAGATTCTGTAAAGGAT
TGTACAAGTGCCATAGAATTGGATCCTTCCTATCTAAAAGCTTACTTAAG
GCGTGCCAAAAGTTACATGGACCAGGAATTATACGAAGAAGCAGTGCGTG
ATTatgaaaaaattaccaaaatggATCACAACCATGAGTATAGGCGTCTA
TTAAAAGAAGCGAAACTGGAGTTGAAAAAGAGTAAACGAAAAGACTATTA
CAAAATTCTTGGCGTTTCAAAAACAGCTTCTGAACAAGAAATGAAAAAGG
CGTATCGAAAAGAAGCCCTCAAACATCACCCAGATCGACATTCCGATGCA
GatgaagagaaaaagaaatctGAAGAACAACTCTTCAAAGATGTAAGTGA
GGCATATAACATATTATCGGACCAACAAAAAAGGGCACGTTACGATAGCG
GACAGGACCTCGACGATCACGGAATGGATTTTGACTTTGACCCGAACATT
ATTTTCCAATCGTTCTTCGGCGGTGGCGGTGGCGGTGGTTTCGGCGGAGG
CGGCTTTCCTTCGCATGGAAGACAACGAGGTGGAGGAGGTGGTGGCTACC
CTGGCGGATTCACTTTTTCGTTTGGCTAAAATCACCATGGCAATGATCGA
GCTTTGGATCAACTCAACGACTTGTGTGAGACTTTGTACTTTAGAAAGTA
AAAAGACCGTAATATTTTAAGAATATATTTTGACTAAAAAGTGATATTCA
Run BLAST on NCBI

transcript from alignment at scaffold_165:39008..46766-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049697 ID=TCONS_00049697|Name=TCONS_00049697|organism=Clytia hemisphaerica|type=transcript|length=7759bp|location=Sequence derived from alignment at scaffold_165:39008..46766- (Clytia hemisphaerica)
NNTTACTTAATTTCCTAGATCTGGAACCAAGTAAGGCGGCATTTTACGCA
AACAGATCGGCTGCATTAATGATGGTGGAAGAGTTCAACAAAGCACTTGA
AGATGCTCGAAAAGCCTTCAATTTGGATAACAAGTTTATCAAAGCATACT
TAAGAGCAGCCAAGTGTTATATTGCCACTGGACAGACTAATAATGCAATG
ATGACACTACAAAAGGCCAAAACGCTTGAACCAACCAATAAATCAGTATT
GAGTGAGGTCAGTGAGTAAGATCATACTCTCGGGTACCTAATAGCCAGGG
GGTTTGGAATAAGCAAGGGGGTTGGAAAAAAATCTCAAAAATTAATTAGC
GGGATTAGCGGGCCCGACCCCGGCTATTAGTTAACCAAGAGTACCTGATC
AACTTTAAAGTTATACTTATTCTGGTGTCTTATTTCTGGTGTCTTGAATT
ATCTTAAACTAACTGCCTTCAGGACAATTGTTTTGGTTTTGATTTGCCAA
TTAAAATGAAATTCACTGCCCTGTTCTTTACTTATAGCTGAAAAATGTTC
AAATAATGGCGGATTACGAAAACCAAAGTGCGAATGCTTTTGAAATCAAG
GATTACCGTAAAGTAAACTTTGTGATCTCTTTAAAATCTTTTTTTCTCGG
AGTGTACTGAAGTGAGACCTACTCCCGCAATCGAAGCCTTCCAAAGGATC
ATGTTTTGATAGCTATGTACCATAAGGTTAGGCTCCCCCTACCCATTGGA
TCCTTCTCTTTTATTGTGTTCGTTTTTTATGCATTTCTTCTTATGTTGTT
TAGGATTTAGAAAATTTTTCACCGCCGTTCACATTATGTAAAACTCAACA
TTCCTCTACAAAACTACGAGTCAAATTATTATATGCCGTTTTTTTCATTT
TTATTCAGAAAATAAGGGCAAATAATGATAAAGACCTATGACGGGTCCCT
AAGTTTGGTTTTCTGGTCATGGAGGGGCTATGGCTGATGGGGGGATTTAA
ACTTTAGATGAGGGGATTTATTATTATTTCTTTTCAGATCGAGTTTTGCA
TGCGTAAGCTTTTGGAATATGCACCAAGTTGTTTGGGCTACAAAGGATTA
CAGGCAGAGTGTATGGCCATGACTGGAAAGTATAGTGATGCTCAAATCCT
TGCTAAGTAAGTATCTATCTAAGTATCATGACCAAAACAAAACATGGTGT
GGTGTTTATTCGTGTGTATTTTACATGTGTTGTTCAATCAATCGCCAAAA
GTGATCCCCAGTACTGAGTGTCGGAAGTATAGGTGTGTTAATATCCATTT
TTTTAGTCACCTTTTTGGTTTGATTGAAATCCAAACTTACAAACAATGGA
AGGATATGTATCATCATTGATTATCACATTAATATTTTAGTGACATTTTG
CGCAAAGATCAGCACCATTCCGAGGCTCTATATGTTCGTGGCTTATGCTT
GTATTATCAGGTAACACAGAAAACTTATAAGTAATTACTTTATTTTTGGC
TATTATGAGCTGTTAAGGAGTGGGGACACGAGAGATTCTTTTGAGCTCCA
TTCCAACAACTTCAGTTTTTCTTGCGTCGCCACATAGCAACATATGAAGC
TGCACGCATCCCTTCTGATATGTTTTGATATATAGGGGCTGGTAATTGTG
TATAAAATTCCTGTCTGAGAGTTACCCCAAATTTGGGTTAACCTGTTTCA
ACTTTTTTATAAAAAGGTTTACAGTAGTTTAGAAATTCAATGATTGTATG
AACCTCTAGTCATAAAAATTTTAAATTCAAATTTAATGAAACATTATCAT
AAAAATCTCGTCTCTGCACTGCTTTAGAATTTTTCATGATTAGCTAGTAC
TTGGCTTTGAGAAAAAGATAACACTTGTTATGATGGAATCGACGCTTTGG
ATAGCGCAATTCGATTCATGACTTTTTAAATTTGGTTCAATGAAAAAGAA
CTGTTCAAATAAATTCAAGTGATGTATTCTAAAACAATGACTTTAATTGG
AATCACTGATCGAAGTGAAATGAAGTTGATTACCGGGTAACCAACAAAAA
GTATTTGTACAATTATGGCTAAATACATGGGTAAATTTAGTATCCATAAC
TCATCATACTCATCATATTTCTGGTTACCCGGTAATTAACTTCATTTTTC
TCGCGCAGTTCTTTGTTTAGTAAATTTTCACTTTGGTTTTTCAGGATCAA
ACAGAGAGAGCTTACAAATTGTTTCAACAACTGCTTAGAACTGCTCCGGA
CTTCAAAAAAGCTAGAGAAGCTTACAAGGTACTGCTATTTAAGTTTTCCT
CTCACCCGTTCAATCATTTTATGAGAGCGATAATACGCTCTTCCTCAGTT
ACTTTCTTTGATTGCTGATTTATTGCTTCAACTTCTTTACAAACAGGGTA
AAACTTATATATTGCCAAAGTTCAATTCCCCTCAGGGGGGGGGGGTCAAG
CAGTTAATACACGACACCTATGACAATTAGTACCGTGGTGGGTCCTTTTC
TGAAATTTGCAAATTGCAGTTAATACACAAGTGTATTAACTGTCAAAAGG
GGTGGTGTTAAGACAATTTTAGAACTCAAAAAGTGTATTAACTGCCTACC
ATAGCTTGGCACTTTCTATAAATTTTGAAACTAAGCAACCATGCAACTGG
AAAACCTCAAAATCTTTTTCTGCTTACTCAAATTTTAACTGTTGCATTGC
TTAGGCAACTTTCTGGCAAGGGATTTGCACCCCGACTTACAAAAACTTAA
TTTAAATTTTCTAATGACATAAATCTGTGACATAAGTAGTCTCAAAACAG
TTAAAATCCCTTGTATTGCATCAAATTAACGGGAAAATAAGCGGTGGACC
TGCATGGGACGGTTTGTCGGCCGCTGCAAACTCACTTTGGGGGTGGTGTA
TATATTTAATGGGTCAAAAACAGTTAATACACAGTGTACTAAGTGTCAAG
GGGTGGCGGTCCTTTTGAAAAATTCATTTGGTAGAGTTGTGTATTAACTG
CTTGTCCCTCCTTACTCTCTATTTCCACTCAATCTGATGAAAGAGAAATT
AGTTGCAGTACTTTCAATTGATTCTTAAACTTTTAATTTCAGAAAGCAAA
GAATTTGGAAGCAACGAAAGAGGAAGGAAACAAAGCTTTCCGAGGTGGAG
ACTACCAGGAAGCATTGAGGCTGTACACAAAAGCTTTAGAGATCGACCCT
ATTAACAAATCTACAAACTCCAAATTATATTGCAACAGAGCCACAGTTAA
TTTCAAACTAAAAAAAATGGAAGATTCTGTAAAGGATTGTACAAGTGCCA
TAGAATTGGATCCTTCCTATCTAAAAGCTTACTTAAGGCGTGCCAAAAGG
TAAGCTTGATCACTTCTCTACTTCTTTCGATTGAAAAACTGATGTAATTT
AAAAGCACAGATCATTTAGCATCATTATTGCTTTCATCTTCTGTATCTGT
AGAGTTGAGGTATAGTTAGAGTCCGAAATTATATTCAATTTAGATTAACG
TGACAAAACCTATGGGTATGACTCGGATTTGCGCATAGGTGAAAATTGTT
GGTCTTTTGATCGTCAATTGTTCGACTTGAATATGCGATTTCTGGGTACA
TATTTTAACTATTATAAGGCCAAAACACTTTAAGTTGCTGGATCTAGGAA
ATGTAGAGCAGAGATTTTACTTCTAGTAAAAACAATATCAAAAAAGTGAC
GTCACGCGAAACTAAAGATCTAAAGTAAATTGATTTCGTCCTTCTTGACC
AATCAGATACGTGTAGTTATGTAAGTTTAACAATTGAAATAATAATTCTG
AAAAATTGATCTCGCGTACACAGTAAGATTTCTGAACAAAGCAGAGTCCT
ATCGGTTGATAAGATAGCTCTTGTCATTATTTTCAGTTACATGGACCAGG
AATTATACGAAGAAGCAGTGCGTGATTATGAAAAAATTACCAAAATGGAT
CACAACCATGGTATACAATTTATTTTCTCAGCTACTGACATTTTTTTCGT
GCTGTTTTTTCAAACGTTCAATTAGTTTGAACTCTTACTTCTCCTCAACC
AACAAATGGTTTATCATTGACTTTTCTAAAACGTTTTCTTTCAAATTGTT
ATGTTTTGCAGAGTATAGGCGTCTATTAAAAGAAGCGAAACTGGAGTTGA
AAAAGAGTAAACGAAAAGACTATTACAAAATTCTTGGCGTTTCAAAAACA
GCTTCTGAACAAGAAATGAAAAAGGCGTATCGAAAAGAAGCCCTCAAACA
TCACCCAGGTATCTAAATATATGTTCTTATTATGGAGAATTGATAGGCGG
CTCGCTGAAGGATCATTCAGGAGTTGCAATTAATGGTTGAAATTTAGTGA
AGATGCACATTGACACGATAATAATCACAACCTCGTCCTCATGCCTATTC
TCGTTTTTTGATTGACGAGGAGGAGATTACTCCTTGACTACTAAAATTTT
TTATCGTTTGTAGCATTCTTGCGATCAAGCAATGCTTAACATTTCGTACC
ATTACATTAGAGTAACAAATCTCGTTATTTTGATGTTCTTATAAGAGAAA
CAGAAAAGAATAGAAATATTTAACGATTGAATGATGTTTTTTTATTATAC
AAAAAATATATTTTCTTTTGTTTTGCTCTGTCAAAAGATATATTGTACAA
GTAAAACAGTTTTCAAGAGACTCAGTTCAGTTATGTTGTATCAATTGGGT
TTGTACAACCTTTCGAGATCATGTAACCTTTTTGAGGGAACGAGACCGGG
GCTAAAACTTACCAGATAGCATCCAAATATAAATGCCGTTTATGTTTGCT
CTAGGATCGAGGGTGTAAAAATCATACTCATTGAAGTCGATCAGGGGTAA
CTCTTTTGTGGTATTCGAAACATATGTCTCTGAGGGAGTAAATGACGATA
TGGTGCCAATAAGCTAATTGTAAGGGAATCAAAGCTTTACTCGCCGCTTC
ACTAAGAACCTTCACTTCCTCTGTAGATCGACATTCCGATGCAGATGAAG
AGAAAAAGAAATCTGAAGAACAACTCTTCAAAGATGTAAGTATCGTGCCA
ACTTAAAATAGTTCCATAAGGACAGCTATCGCTTTAACCTTTCGAGCATC
TTTGCAAGGAAATTTCGGCATCATTGATGACATCATTGCCACCTGATGAC
GTCATCGTTCTTTGAAATTACCGAAAATAGAACCTCTAACATTTTTCACT
TTCTTATTTTTTCTCAAATTCCGTGCGGCCGCTCCACGTGGCGTTTATTA
TCATATTTCTTTTATTTTTGGAACACATGAGCATTTTTTACCAACTACTG
GTATTGTGTATTTGACAGACTGGGTANGAAAAGAATAGAAATATTTAACG
ATTGAATGATGTTTTTTTATTATACAAAAAATATATTTTCTTTTGTTTTG
CTCTGTCAAAAGATATATTGTACAAGTAAAACAGTTTTCAAGAGACTCAG
TTCAGTTATGTTGTATCAATCGGGTTTGTACAACCTTTCGAGATCATGTA
ACCTTTTTGAGGGAACGAGACCGGGGCTAAAACTTACCAGATAGCATCCA
AATATAAATGCCGTTTATGTTTGCTCTAGGATCGAGGGTGTAAAAATCAT
ACTCATTGAAGTCGATCAGGGGTAACTCTTTTGTGGTATTCGAAACATAT
GTCTCTGAGGGAGTAAATGACGATATGGTGCCAATAAGCTAATTGTAAGG
GAATCAAAGCTTTACTCGCCGCTTCACTAAGAACCTTCACTTCCTCTGTA
GATCGACATTCCGATGCAGATGAAGAGAAAAAGAAATCTGAAGAACAACT
CTTCAAAGATGTAAGTATCGTGCCAACTTAAAATAGTTCCATAAGGACAG
CTATCGCTTTAACCTTTCGAGCATCTTTGCAAGGAAATTTCGGCATCATT
GATGACATCATTGCCACCTGATGACGTCATCGTTCTTTGAAATTACCGAA
AATAGAACCTCTAACATTTTTCACTTTCTTATTTTTTCTCAAATTCCGTG
CGGCCGCTCCACGTGGCGTTTATTATCATATTTCTTTTATTTTTGGAACA
CATGAGCATTTTTTACCAACTACTGGTATTGTGTATTTGACAGACTGGGT
AAAAGTTGGTCCGGCCCTTTTTGCCTAAATCAGGCCTAGGTTTCTGTATC
TAGGGATTGGAAAATGCCATTGACTTTTTTGTCAGGTGTTGATAATGCAA
GCTTACAACCGAAATTTCCGATTTTGTAAAATTCCAAATTCCAGATGATT
TTAGCAAAATTCTCATTCTGGCATGTAAAATACCAATCAGACAGGTGGCC
GAACCAAATCATCTCCGATTATGCATAGATACTGAAATTTTCACCAGTCA
ACCAGTTCAAGATTATAGCACTATCAATCTTGAGTTTTAAGGTGGGAGCT
GCGAGCCCCCCTCCCCAAGGTTCCCCTACCCTAGTAAAAAATAGGAAGAT
GCTCGCGGGGTTAATAATTGGTTCGATACGTTAATCGGGTTTAATTGGGC
TGATAATCATGAAATAATTATTTCACCCAGGTAAGTGAGGCATATAACAT
ATTATCGGACCAACAAAAAAGGGCACGTTACGATAGCGGACAGGACCTCG
ACGATCACGGAATGGATTTTGGTAAGAGATTAATATTTTCACTGTAAATC
TTCTTTACTGTATTTCAACAATATCGCACGGGTATTTGGGAAAGTAGGGA
AGGCTATTTTTTAGAATTTTGAATTACCTCAACCTTAGTTGAATGGTATC
TTTTTCTTTCAAGAGAGCACGCTTACATTCCTGTTCCTCAATCTAGTACC
AAAAAGTAGGTATTAGCGAGACACATAATGAAATACTCCTACTTGGATAC
TGTAAATAATACAACTTAACCTTTTCACTTTATTTCTCACAGACTTTGAC
CCGAACATTATTTTCCAATCGTTCTTCGGCGGTGGCGGTGGCGGTGGTTT
CGGCGGAGGCGGCTTTCCTTCGCATGGAAGACAACGAGGTAAGATTAAAC
AACTATCTTGTATCCCGTTTGTAAACTAACCAGTTTCGTGACTGAAAGAT
TCTGAAAAGGAAACTTGGGTGCCCAATAATAGTTAAAAAAAATCAGTAAC
GTTTATCAAAAAAATAATGAATTTATGACCTTCACCCGACCTAGGAAAAT
AATTACCATTTTGTACAAAGTGAAATTCAGTTCGGTGAGTGCTTTTGTTT
TGACTTTTTAGAAAATTTTAAATTGATGTGTCTACTCTTACCCTATTTTT
CTGTGAACTCCTTTTTCTAAAACTTAATTAAACTCAAGATATTCCTCTAT
TCCAAACTCTTCACTTTCTAATTAGATTTAAAAAAGTCAAATATGCCTAA
CAACGGACCCTTTGTTAGGTACGAGAGGGTACATTAGAAGGAAAGAAGTT
AAAAAGGCACTTATCAAAATCTTCGTCAAATATCTTTATTTTCGTTTTTT
TCTCTTCAAAACTCTGACTTTCGTAGCATCTTGTAACGAGTTCCAAATAT
AGAAATATAATTAAAGGGGTGTAGTAAGGCTTGCACGTGGGACAATAAAA
GAAGCGTAATTGAACGAGATTTTACTTATTGTCATTAGGTGGAGGAGGTG
GTGGCTACCCTGGCGGATTCACTTTTTCGTTTGGCTAAAATCACCATGGC
AATGATCGAGCTTTGGATCAACTCAACGACTTGTGTGAGACTTTGTACTT
TAGAAAGTAAAAAGACCGTAATATTTTAAGAATATATTTTGACTAAAAAG
TGATATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031513XLOC_031513Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049697-exon-scaffold_165-1575043694:46510..46766TCONS_00049697-exon-scaffold_165-1575043694:46510..46766Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:46155..46229TCONS_00049697-exon-scaffold_165-1575043694:46155..46229Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:45611..45729TCONS_00049697-exon-scaffold_165-1575043694:45611..45729Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:45307..45376TCONS_00049697-exon-scaffold_165-1575043694:45307..45376Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:44489..44572TCONS_00049697-exon-scaffold_165-1575043694:44489..44572Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:43418..43674TCONS_00049697-exon-scaffold_165-1575043694:43418..43674Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:42807..42880TCONS_00049697-exon-scaffold_165-1575043694:42807..42880Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:42509..42655TCONS_00049697-exon-scaffold_165-1575043694:42509..42655Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:41732..41790TCONS_00049697-exon-scaffold_165-1575043694:41732..41790Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:40146..40236TCONS_00049697-exon-scaffold_165-1575043694:40146..40236Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:39779..39874TCONS_00049697-exon-scaffold_165-1575043694:39779..39874Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1575043694:39008..39178TCONS_00049697-exon-scaffold_165-1575043694:39008..39178Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:46510..46766TCONS_00049697-exon-scaffold_165-1510915933:46510..46766Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:46155..46229TCONS_00049697-exon-scaffold_165-1510915933:46155..46229Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:45611..45729TCONS_00049697-exon-scaffold_165-1510915933:45611..45729Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:45307..45376TCONS_00049697-exon-scaffold_165-1510915933:45307..45376Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:44489..44572TCONS_00049697-exon-scaffold_165-1510915933:44489..44572Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:43418..43674TCONS_00049697-exon-scaffold_165-1510915933:43418..43674Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:42807..42880TCONS_00049697-exon-scaffold_165-1510915933:42807..42880Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:42509..42655TCONS_00049697-exon-scaffold_165-1510915933:42509..42655Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:41732..41790TCONS_00049697-exon-scaffold_165-1510915933:41732..41790Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:40146..40236TCONS_00049697-exon-scaffold_165-1510915933:40146..40236Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:39779..39874TCONS_00049697-exon-scaffold_165-1510915933:39779..39874Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1510915933:39008..39178TCONS_00049697-exon-scaffold_165-1510915933:39008..39178Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:46510..46766TCONS_00049697-exon-scaffold_165-1491911889:46510..46766Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:46155..46229TCONS_00049697-exon-scaffold_165-1491911889:46155..46229Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:45611..45729TCONS_00049697-exon-scaffold_165-1491911889:45611..45729Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:45307..45376TCONS_00049697-exon-scaffold_165-1491911889:45307..45376Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:44489..44572TCONS_00049697-exon-scaffold_165-1491911889:44489..44572Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:43418..43674TCONS_00049697-exon-scaffold_165-1491911889:43418..43674Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:42807..42880TCONS_00049697-exon-scaffold_165-1491911889:42807..42880Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:42509..42655TCONS_00049697-exon-scaffold_165-1491911889:42509..42655Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:41732..41790TCONS_00049697-exon-scaffold_165-1491911889:41732..41790Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:40146..40236TCONS_00049697-exon-scaffold_165-1491911889:40146..40236Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:39779..39874TCONS_00049697-exon-scaffold_165-1491911889:39779..39874Clytia hemisphaericaexon
TCONS_00049697-exon-scaffold_165-1491911889:39008..39178TCONS_00049697-exon-scaffold_165-1491911889:39008..39178Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_165supercontigscaffold_165:39008..46766 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
61.4334	58.6879	56.6452	63.5159	34.5394	26.8103	33.5291	36.6817	42.1468	42.8401	66.5133	62.3003	94.8831	106.034	71.5779	61.8013	46.8914	57.0805	68.0364	66.5793	63.7415	63.9183	59.7725	63.2079	84.3989	94.494	88.9287	131.623	62.574	61.8418
Blast
[Close]
BLAST of TCONS_00049697 vs. Swiss-Prot (Human)
Match: DNJC7 (DnaJ homolog subfamily C member 7 OS=Homo sapiens GN=DNAJC7 PE=1 SV=2)

HSP 1 Score: 394.43 bits (1012), Expect = 2.340e-131
Identity = 216/397 (54.41%), Postives = 293/397 (73.80%), Query Frame = 3 
Query:   15 LDLEPSKAAFYANRSAALMMVEEFNKALEDARKAFNLDNKFIKAYLRAAKCYIATGQTNNAMMTLQKAKTLEPTNKSVLSELKNVQIMADYENQSANAFEIKDYRKIEFCMRKLLEYAPSCLGYKGLQAECMAMTGKYSDAQILANDILRKDQHHSEALYVRGLCLYYQDQTERAYKLFQQLLRTAPDFKKAREAYKKAKNLEATKEEGNKAFRGGDYQEALRLYTKALEIDPINKSTNSKLYCNRATVNFKLKKMEDSVKDCTSAIELDPSYLKAYLRRAKSYMDQELYEEAVRDYEKITKMDHNHXXXXXXXXXXXXXXXXXXXDYYKILGVSKTASEQEMKKAYRKEALKHHPDRHSDADXXXXXXXXQLFKDVSEAYNILSDQQKRARYDSGQ 1205
            +D+ P  A++Y NR+A LMM+  F +AL DA+++  LD+ F++ +LR  KC+++ G    A  + Q+A  L+  N     E KN   + +YE  +   FE +D+RK+ FCM + LE+AP+C  +K L+AEC+AM G+Y +AQ +A+DILR D  +++ALYVRGLCLYY+D  E+A + F Q LR APD +KA  A + AK L+A KE+GNKAF+ G+Y+ A  LYT+AL IDP N  TN+KLYCNR TVN KL+K++D+++DCT+A++LD +Y+KAYLRRA+ YMD E YEEAVRDYEK+ + +   E+++LLK A+LELKKSKRKDYYKILGV K ASE E+KKAYRK AL HHPDRHS A  E +K EE+ FK+V EA+ ILSD +K+ RYDSGQ
Sbjct:   55 IDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDSGQ 451
The following BLAST results are available for this feature:
BLAST of TCONS_00049697 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNJC72.340e-13154.41DnaJ homolog subfamily C member 7 OS=Homo sapiens ... [more]
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