TCONS_00049679 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049679
Unique NameTCONS_00049679
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049679 ID=TCONS_00049679|Name=TCONS_00049679|organism=Clytia hemisphaerica|type=transcript|length=101bp
TTAAAATCAAACCACAGAGCATATAATACAATACAGTCTAAGAAATATTT
ATTTCCGCAAAGGTAATGTttactttttcaatttcttttcagtataataa
a
Run BLAST on NCBI

transcript from alignment at scaffold_164:244873..244973

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049679 ID=TCONS_00049679|Name=TCONS_00049679|organism=Clytia hemisphaerica|type=transcript|length=101bp|location=Sequence derived from alignment at scaffold_164:244873..244973 (Clytia hemisphaerica)
tttattatactgaaaagaaattgaaaaagtaaACATTACCTTTGCGGAAA
TAAATATTTCTTAGACTGTATTGTATTATATGCTCTGTGGTTTGATTTTA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031501XLOC_031501Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049679-exon-scaffold_164-1491911889:244873..244973TCONS_00049679-exon-scaffold_164-1491911889:244873..244973Clytia hemisphaericaexon
TCONS_00049679-exon-scaffold_164-1510915933:244873..244973TCONS_00049679-exon-scaffold_164-1510915933:244873..244973Clytia hemisphaericaexon
TCONS_00049679-exon-scaffold_164-1575043694:244873..244973TCONS_00049679-exon-scaffold_164-1575043694:244873..244973Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_164supercontigscaffold_164:244873..244973 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049679 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top