TCONS_00049654 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049654
Unique NameTCONS_00049654
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1168

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049654 ID=TCONS_00049654|Name=TCONS_00049654|organism=Clytia hemisphaerica|type=transcript|length=1168bp
CGATGGCATCAAATAAATGGTCTTCTTTATCTGACTCATCAAAGTTTTCC
ACAATGGAACAATCCTTGAAATAATCACAATCTTCCAGTCTGTTCTTGTA
AATTTCATCCCTGTGTCTATATATCGTACCTTTTCCTTGGCTCGCCATCT
TAATGATGGCAGTGCAAGTAATAAATAATTATGACAAACAGAAACACAAC
AACAATTTCCTCACCTGGGTGGAGAACAGAACAATCTTTATATGTACACA
AATGACCGCTATCCGTTCTCCTTCCAATTTGTTAGCTTGTTTACGCAATG
GAACGACTTCAGCGTTCGAATTATCAAATCGAacgtttttgttcgaaaat
taTTTCGTCCACAAACGCCCCAAgagattttattttcgaaaaaagcgaGT
TTGAAGGTgcatcttctataagaataactGGTCAGGATTTTTTCTTGCTA
CTGTGCTTACAAAACAAAATGGAACGCCCATCGAAAGACAGAAAACCTTC
ATCTAAATTTGCACAAGGAGATCAAATTGGCGCTGATAACGGTCCCCTAC
TGACCATACTATTTACAGTGGAAGAGGCAAATGGAAACTGTTTAACTATG
GTGTTACCTTATGGCACGTTATGCCCAAAAGACATCGTGACAGGGGAACT
ATTGGAGTCATCAAAACTCAAGAAGAACATGAAACTACTATGTCTATACC
CACATGATAAACTTTACTATCCTGCAGTGTTGACGAAAATTGGTGGGAGG
AAAAGAAAGTCAGAAACAACagAGAAGGAAGACGATCAAGATGAACATAA
CACGGAAAGAGACATGGAAGAAAAAGAACCGTCATCAACAGAAAAGAAAA
GTGGGAAAagcaaaattgttaaaaaaaAATCGGAAAAATCTAATAAAcca
gaagaaaaaaaggcaaaaatagaGGCAAGCAACATAGCTGGTCGAGAGCT
AATGGAAAAGGTTGACGaaaatgcaaataatgATTTGTCTGAAGAACTCT
TGGacaattttcttcaaaagacACAAGACAAGACCCAACATCACGAAAGG
CATATTTTCACCTTTGAAATCAAGTGAAGGGAGTCAAAGCAAAAACAATG
GAAATTCTGATCACAACGCAACACAACCTTGTTTCTCGCCTGATGAAAGT
ccaaaaataacaaacaaa
Run BLAST on NCBI

protein sequence of TCONS_00049654-protein

>TCONS_00049654-protein ID=TCONS_00049654-protein|Name=TCONS_00049654-protein|organism=Clytia hemisphaerica|type=polypeptide|length=259bp
MERLQRSNYQIERFCSKIISSTNAPRDFIFEKSEFEGASSIRITGQDFFL
LLCLQNKMERPSKDRKPSSKFAQGDQIGADNGPLLTILFTVEEANGNCLT
MVLPYGTLCPKDIVTGELLESSKLKKNMKLLCLYPHDKLYYPAVLTKIGG
RKRKSETTEKEDDQDEHNTERDMEEKEPSSTEKKSGKSKIVKKKSEKSNK
PEEKKAKIEASNIAGRELMEKVDENANNDLSEELLDNFLQKTQDKTQHHE
RHIFTFEIK
Run BLAST on NCBI

transcript from alignment at scaffold_164:107288..111791-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049654 ID=TCONS_00049654|Name=TCONS_00049654|organism=Clytia hemisphaerica|type=transcript|length=4504bp|location=Sequence derived from alignment at scaffold_164:107288..111791- (Clytia hemisphaerica)
CGATGGCATCAAATAAATGGTCTTCTTTATCTGACTCATCAAAGTTTTCC
ACAATGGAACAATCCTTGAAATAATCACAATCTTCCAGTCTGTTCTTGTA
AATTTCATCCCTGTGTCTATATATCGTACCTTTTCCTTGGCTCGCCATCT
TAATGATGGCAGTGCAAGTAATAAATAATTATGACAAACAGAAACACAAC
AACAATTTCCTCACCTGGGTGGAGAACAGAACAATCTTTATATGTACACA
AATGACCGCTATCCGTTCTCCTTCCAATTTGTTAGCTTGTTTACGCAATG
GAACGACTTCAGCGTTCGAATTATCAAATCGAACGTTTTTGTTCGAAAAT
TATTTCGTCCACAAACGCCCCAAGAGATTTTATTTTCGAAAAAAGCGAGT
TTGAAGGTGCATCTTCTATAAGAATAACTGGTCAGGATTTTTTCTTGCTA
CTGTGCTTACAAAACAAAATGGAACGCCCATCGAAAGACAGAAAACCTTC
ATCTAAATTTGCACAAGGAGATCAAATTGGTAAGTAAAGTTTTACGTTTA
TATTCTGCAAATGTTTTCCTATACTGTATGCACAACACCTATGTCACAGA
CCCACTGGGACCATTAAACAATAAGATTTCTTTACACATCGGGATTTTTA
TCCCCATTGAAGAGAGAATTTTACCTGGGTGTGAGACAGGGGTGTTGTAC
AAAACAAGACTTGTCTTGTAACTTCTGGTTTTGATGATAAATTTTAGGAG
GGTGATAAGAATAGAAAGCCATAGTAAATACCACGGTCTGCAGTAAAGTC
CATAGAATGAATGTTTGTAATTGTATTTAAGTCAAAATTGCGACTTTTAC
TTTCTTAATTTTTTTCTGACTAAACGTTTTTTTTTTAAGAAACATGAGAC
TCAACTCAGAATGCCTAAAAATTAAAAAACATGCTGAGGCTGAGAAAATG
ACATTTTTAATTCGGTTTTTAAGAGTTTTCCAATCAAATGTTTTTTCTTT
ACATGAAAATAAAATTGTAAATAAACACTACTGTATGTCAAAAAATTCAG
AAACATAAAACTAGTTTCTCAAAAAAAAAAACGTGTAGTTTTCCTTCGTA
TTTAGGCGCTGATAACGGTCCCCTACTGACCATACTATTTACAGTGGAAG
AGGCAAATGGAAACTGTTTAACTATGGTGTTACCTTATGGCACGTTATGC
CCAAAAGACATCGTGACAGGGGAACTATTGGAGTCATCAAAACTCAAGAA
GAACATGAAACTACTATGTCTATACCCACATGATAAACTTTACTATCCTG
CAGTGTTGACGAAAATTGGTGGGAGGAAAAGAAAGTCAGAAACAACAGGT
TATTTTTTTTCTTTTATTTTGAAAGAATTCTCGAGTAAGTTCTAAGTCTG
TCTCAAAATAATTTGCAGCTGAATACAAAAATGGCTGTAACTTTTGATAG
AATTCGAATCAAGTTGCGATTAAGTGCTTGTTAAAAAGATATTCGTAAGT
GGAATATTATCAAGTAAGAAAATTGAGAAAAAGAGGAAAATGAAAAATGA
AGAAGAAAAAAATCAACTTCTTGTAGAAATGTGGTATAATTACCATTTTC
ACAGGAGCGATTCTTCAATCTTAGATCATCATCACTGTCAAAAAAATTTT
CAAAAATATTCATAATCAAATGATATCAAACAAAGTTTATTGCTGGGCGA
CTCTATAAAATAGTAAAAACTGGTAAAAAACGACAAAAAAAACAGCCTTT
TGTCGATCAACCAGCAATAAACTTAGTTTGATATCTTTTGATTGAATATT
TTTGAAAAATTTTTTCACATTGATGATGATCTAAGATTGAAGAGNATTGA
ATGAATATTTTTGAAAAATTTTTTCACATTGATGATGATCTAAGATTGAA
GAGTCACTCCTGTGAAAATGGTAATTATACCACATTTCTACAAAAAGTTT
ATTTTTTTCTTCTTCATTTTTCATTTTCATTTTCCTTTTTTTCTCAATNT
GAGAAAATGACATTTTTAATTCGGTTTTTAAGAGTTTTCCAATCAAATGT
TTTTTCTTTACATGAAAATAAAATTGTAAATAAACACTACTGTATGTCAA
AAAATTCAGAAACATAAAACTAGTTTCTCAAAAAAAAAAACGTGTAGTTT
TCCTTCGTATTTAGGCGCTGATAACGGTCCCCTACTGACCATACTATTTA
CAGTGGAAGAGGCAAATGGAAACTGTTTAACTATGGTGTTACCTTATGGC
ACGCTATGCCCAAAAGACATCGTGACAGGGGAACTATTGGAGTCATCAAA
ACTCAAGACGAGCATGAAAGTACTGTGTCTATACCCACATGATAAACTTT
ACTACCCTGCAGTGTTGACGAAAATTGGTGTGAGGAAAAGAAAGTCAGAA
ACAACAGGTTGTTTTTTTTCTTTCATTTTGAAAGAATTCTCGAGTAAGTT
CTAACACAATAAGAATTCACTGTATTTGATCCAAAATCTCAGCCGTATGC
TGAATAACATGTTTGAACTGTTCGTCGGTACACCAGAGGCTCGTGTATAT
TATTCCAAAGATTTTTCACTGCGGTCAACTTCAGCAAATCCATCTACAGT
CCAAGTCAAAACAGAGATTTTATTAACGAAATGTCATCGTGTCGAATAAT
GCATATTGCGATTATTTCGCTGGAGGAAGGGTGCAGAATTTTGATAGTCT
GTACAAGCGAATCGATTTGGATAAGGGATAAGTCATGATTCCAGCCCTGC
CAACTGTTGAAATTTGAACTGCAAAGCGAGAAAAAAATGAAAAATAGATA
AAAAATATTACTTTATTTATAGAGAAGGAAGACGATCAAGATGAACATAA
CACGGAAAGTAAGCAGTTAAAGAGCTATTTTTTCTTAGAGTCTTCAGGGT
GTGATACCTCACCCTCTTTGATTTTGATAAAATTTGGTCCAAATGATATA
TCATACAAGAAAATAAGACCTTTTGTAGAGAATGAGAAAAAATCAAATAG
TCTCCAATAATTTTATGTAAACTTGACCCGATATTCAGTTAGTACTAACT
GTACTAAGTGCACCAAGGGTGGTGGTGGTGTTGTTACTAACTTCTTGCAA
AAAAGCAGTCAGTAGGCATGATGTCTTGTACTAACTGATTCACCCCCTGA
TTCTTTCAATTAAGTATATCATTAAATAAAAATAGTTGACTGTTGACACT
GTTAATTTTTCTACAGGAGACATGGAAGAAAAAGAACCGTCATCAACAGA
AAAGAAAAGTGGGAAAAGCAAAATTGTTAAAAAAAGTAATCTTAGTTTTA
TTTTTTCTTCATGCTATTTTTAATGCTTTCAATGTATCTTTTCTTTTAGT
TTTTTTGGGAAACAAGCTCTCAGTCATGCTTAGGGATATTTTAGACTCTA
ATTATGTTTTCTATTTAGTCTCTAATTTTTCATGAGGTTTTGGACAAACA
GTAACGTCACAAAAAGGGGGGGGGGTCGGTACTAAAATCTCAGATATCAT
GACCTTTAGTGATGTGCTGGTACTGCAAAAAAGCTCAAAAAGTGTTTTAG
TACCATGTGTACTAAAATACCAAAAAAGTCGGCCAATCAAAGAAATTGTG
TGAAAAATTTTAGTATGCTTAATAACGTTATGCTAATATAAAAAAGCATG
TAAGGACATTGAAAAGCAAGTCTTGTTTATTTTACATAATTGACTTTACA
GAATCGGAAAAATCTAATAAACCAGAAGAAAAAAAGGCAAAAATAGAGGC
AAGCAACATAGCTGGTCGAGAGCTAATGGAAAAGGTTGACGGTAAGTATT
GACATTAAGATTTTGTATTCAAATACAAATTTCTGACAAAGGTCAACAGT
AAAAATAACCATATTACTTTCAGGAGTTATGTTGATCATATACTATTATC
TTATACTTAAGCTTATTGGAATTTGTTCAAAATATGTTCATAATATACTG
TATACTATTATGTTATACTCGAGCTTATTGGACCTTTCTCAAAAAACAAA
AAAAAACTAAACTGAACGGAATTCTGTCTGCAGACAGAAAGTTGCATCAC
TGCATCATAACTGACTTTAACAGACATTTTTCATTTCCCATTTCAGAAAA
TGCAAATAATGATTTGTCTGAAGAACTCTTGGACAATTTTCTTCAAAAGA
CACAAGACAAGTATGGTAAGTGTTAGCTAATATCTTCAGACAATCTTCTC
CTGTATTGACATATATCAAAATGAATATTTTAGTAATAAAAAATTTATTC
TGTTCTTTATTGCAGGACCCAACATCACGAAAGGCATATTTTCACCTTTG
AAATCAAGTGAAGGGAGTCAAAGCAAAAACAATGGTAAGAAAACAAAATT
ATTGCTTTTAAGAGAAATTTGAAATTAAATCTTAAATATATTTTCAGAAT
GTTAATTAATTCCCTTTTGTACTTGATATTCTACAGGAAATTCTGATCAC
AACGCAACACAACCTTGTTTCTCGCCTGATGAAAGTCCAAAAATAACAAA
CAAA

Coding sequence (CDS) from alignment at scaffold_164:107288..111791-

>TCONS_00049654 ID=TCONS_00049654|Name=TCONS_00049654|organism=Clytia hemisphaerica|type=CDS|length=5460bp|location=Sequence derived from alignment at scaffold_164:107288..111791- (Clytia hemisphaerica)
GACCCAACATCACGAAAGGCATATTTTCACCTTTGAAATCAAGTGAAAAA
TGCAAATAATGATTTGTCTGAAGAACTCTTGGACAATTTTCTTCAAAAGA
CACAAGACAAAATCGGAAAAATCTAATAAACCAGAAGAAAAAAAGGCAAA
AATAGAGGCAAGCAACATAGCTGGTCGAGAGCTAATGGAAAAGGTTGACG
GAGACATGGAAGAAAAAGAACCGTCATCAACAGAAAAGAAAAGTGGGAAA
AGCAAAATTGTTAAAAAAAAGAAGGAAGACGATCAAGATGAACATAACAC
GGAAAGCGCTGATAACGGTCCCCTACTGACCATACTATTTACAGTGGAAG
AGGCAAATGGAAACTGTTTAACTATGGTGTTACCTTATGGCACGTTATGC
CCAAAAGACATCGTGACAGGGGAACTATTGGAGTCATCAAAACTCAAGAA
GAACATGAAACTACTATGTCTATACCCACATGATAAACTTTACTATCCTG
CAGTGTTGACGAAAATTGGTGGGAGGAAAAGAAAGTCAGAAACAACAGAT
GGAACGACTTCAGCGTTCGAATTATCAAATCGAACGTTTTTGTTCGAAAA
TTATTTCGTCCACAAACGCCCCAAGAGATTTTATTTTCGAAAAAAGCGAG
TTTGAAGGTGCATCTTCTATAAGAATAACTGGTCAGGATTTTTTCTTGCT
ACTGTGCTTACAAAACAAAATGGAACGCCCATCGAAAGACAGAAAACCTT
CATCTAAATTTGCACAAGGAGATCAAATTGGACCCAACATCACGAAAGGC
ATATTTTCACCTTTGAAATCAAGTGAAAAATGCAAATAATGATTTGTCTG
AAGAACTCTTGGACAATTTTCTTCAAAAGACACAAGACAAAATCGGAAAA
ATCTAATAAACCAGAAGAAAAAAAGGCAAAAATAGAGGCAAGCAACATAG
CTGGTCGAGAGCTAATGGAAAAGGTTGACGGAGACATGGAAGAAAAAGAA
CCGTCATCAACAGAAAAGAAAAGTGGGAAAAGCAAAATTGTTAAAAAAAA
GAAGGAAGACGATCAAGATGAACATAACACGGAAAGCGCTGATAACGGTC
CCCTACTGACCATACTATTTACAGTGGAAGAGGCAAATGGAAACTGTTTA
ACTATGGTGTTACCTTATGGCACGTTATGCCCAAAAGACATCGTGACAGG
GGAACTATTGGAGTCATCAAAACTCAAGAAGAACATGAAACTACTATGTC
TATACCCACATGATAAACTTTACTATCCTGCAGTGTTGACGAAAATTGGT
GGGAGGAAAAGAAAGTCAGAAACAACAGATGGAACGACTTCAGCGTTCGA
ATTATCAAATCGAACGTTTTTGTTCGAAAATTATTTCGTCCACAAACGCC
CCAAGAGATTTTATTTTCGAAAAAAGCGAGTTTGAAGGTGCATCTTCTAT
AAGAATAACTGGTCAGGATTTTTTCTTGCTACTGTGCTTACAAAACAAAA
TGGAACGCCCATCGAAAGACAGAAAACCTTCATCTAAATTTGCACAAGGA
GATCAAATTGGACCCAACATCACGAAAGGCATATTTTCACCTTTGAAATC
AAGTGAAAAATGCAAATAATGATTTGTCTGAAGAACTCTTGGACAATTTT
CTTCAAAAGACACAAGACAAAATCGGAAAAATCTAATAAACCAGAAGAAA
AAAAGGCAAAAATAGAGGCAAGCAACATAGCTGGTCGAGAGCTAATGGAA
AAGGTTGACGGAGACATGGAAGAAAAAGAACCGTCATCAACAGAAAAGAA
AAGTGGGAAAAGCAAAATTGTTAAAAAAAAGAAGGAAGACGATCAAGATG
AACATAACACGGAAAGCGCTGATAACGGTCCCCTACTGACCATACTATTT
ACAGTGGAAGAGGCAAATGGAAACTGTTTAACTATGGTGTTACCTTATGG
CACGTTATGCCCAAAAGACATCGTGACAGGGGAACTATTGGAGTCATCAA
AACTCAAGAAGAACATGAAACTACTATGTCTATACCCACATGATAAACTT
TACTATCCTGCAGTGTTGACGAAAATTGGTGGGAGGAAAAGAAAGTCAGA
AACAACAGATGGAACGACTTCAGCGTTCGAATTATCAAATCGAACGTTTT
TGTTCGAAAATTATTTCGTCCACAAACGCCCCAAGAGATTTTATTTTCGA
AAAAAGCGAGTTTGAAGGTGCATCTTCTATAAGAATAACTGGTCAGGATT
TTTTCTTGCTACTGTGCTTACAAAACAAAATGGAACGCCCATCGAAAGAC
AGAAAACCTTCATCTAAATTTGCACAAGGAGATCAAATTGGACCCAACAT
CACGAAAGGCATATTTTCACCTTTGAAATCAAGTGAAAAATGCAAATAAT
GATTTGTCTGAAGAACTCTTGGACAATTTTCTTCAAAAGACACAAGACAA
AATCGGAAAAATCTAATAAACCAGAAGAAAAAAAGGCAAAAATAGAGGCA
AGCAACATAGCTGGTCGAGAGCTAATGGAAAAGGTTGACGGAGACATGGA
AGAAAAAGAACCGTCATCAACAGAAAAGAAAAGTGGGAAAAGCAAAATTG
TTAAAAAAAAGAAGGAAGACGATCAAGATGAACATAACACGGAAAGCGCT
GATAACGGTCCCCTACTGACCATACTATTTACAGTGGAAGAGGCAAATGG
AAACTGTTTAACTATGGTGTTACCTTATGGCACGTTATGCCCAAAAGACA
TCGTGACAGGGGAACTATTGGAGTCATCAAAACTCAAGAAGAACATGAAA
CTACTATGTCTATACCCACATGATAAACTTTACTATCCTGCAGTGTTGAC
GAAAATTGGTGGGAGGAAAAGAAAGTCAGAAACAACAGATGGAACGACTT
CAGCGTTCGAATTATCAAATCGAACGTTTTTGTTCGAAAATTATTTCGTC
CACAAACGCCCCAAGAGATTTTATTTTCGAAAAAAGCGAGTTTGAAGGTG
CATCTTCTATAAGAATAACTGGTCAGGATTTTTTCTTGCTACTGTGCTTA
CAAAACAAAATGGAACGCCCATCGAAAGACAGAAAACCTTCATCTAAATT
TGCACAAGGAGATCAAATTGGACCCAACATCACGAAAGGCATATTTTCAC
CTTTGAAATCAAGTGAAAAATGCAAATAATGATTTGTCTGAAGAACTCTT
GGACAATTTTCTTCAAAAGACACAAGACAAAATCGGAAAAATCTAATAAA
CCAGAAGAAAAAAAGGCAAAAATAGAGGCAAGCAACATAGCTGGTCGAGA
GCTAATGGAAAAGGTTGACGGAGACATGGAAGAAAAAGAACCGTCATCAA
CAGAAAAGAAAAGTGGGAAAAGCAAAATTGTTAAAAAAAAGAAGGAAGAC
GATCAAGATGAACATAACACGGAAAGCGCTGATAACGGTCCCCTACTGAC
CATACTATTTACAGTGGAAGAGGCAAATGGAAACTGTTTAACTATGGTGT
TACCTTATGGCACGTTATGCCCAAAAGACATCGTGACAGGGGAACTATTG
GAGTCATCAAAACTCAAGAAGAACATGAAACTACTATGTCTATACCCACA
TGATAAACTTTACTATCCTGCAGTGTTGACGAAAATTGGTGGGAGGAAAA
GAAAGTCAGAAACAACAGATGGAACGACTTCAGCGTTCGAATTATCAAAT
CGAACGTTTTTGTTCGAAAATTATTTCGTCCACAAACGCCCCAAGAGATT
TTATTTTCGAAAAAAGCGAGTTTGAAGGTGCATCTTCTATAAGAATAACT
GGTCAGGATTTTTTCTTGCTACTGTGCTTACAAAACAAAATGGAACGCCC
ATCGAAAGACAGAAAACCTTCATCTAAATTTGCACAAGGAGATCAAATTG
GACCCAACATCACGAAAGGCATATTTTCACCTTTGAAATCAAGTGAAAAA
TGCAAATAATGATTTGTCTGAAGAACTCTTGGACAATTTTCTTCAAAAGA
CACAAGACAAAATCGGAAAAATCTAATAAACCAGAAGAAAAAAAGGCAAA
AATAGAGGCAAGCAACATAGCTGGTCGAGAGCTAATGGAAAAGGTTGACG
GAGACATGGAAGAAAAAGAACCGTCATCAACAGAAAAGAAAAGTGGGAAA
AGCAAAATTGTTAAAAAAAAGAAGGAAGACGATCAAGATGAACATAACAC
GGAAAGCGCTGATAACGGTCCCCTACTGACCATACTATTTACAGTGGAAG
AGGCAAATGGAAACTGTTTAACTATGGTGTTACCTTATGGCACGTTATGC
CCAAAAGACATCGTGACAGGGGAACTATTGGAGTCATCAAAACTCAAGAA
GAACATGAAACTACTATGTCTATACCCACATGATAAACTTTACTATCCTG
CAGTGTTGACGAAAATTGGTGGGAGGAAAAGAAAGTCAGAAACAACAGAT
GGAACGACTTCAGCGTTCGAATTATCAAATCGAACGTTTTTGTTCGAAAA
TTATTTCGTCCACAAACGCCCCAAGAGATTTTATTTTCGAAAAAAGCGAG
TTTGAAGGTGCATCTTCTATAAGAATAACTGGTCAGGATTTTTTCTTGCT
ACTGTGCTTACAAAACAAAATGGAACGCCCATCGAAAGACAGAAAACCTT
CATCTAAATTTGCACAAGGAGATCAAATTGGACCCAACATCACGAAAGGC
ATATTTTCACCTTTGAAATCAAGTGAAAAATGCAAATAATGATTTGTCTG
AAGAACTCTTGGACAATTTTCTTCAAAAGACACAAGACAAAATCGGAAAA
ATCTAATAAACCAGAAGAAAAAAAGGCAAAAATAGAGGCAAGCAACATAG
CTGGTCGAGAGCTAATGGAAAAGGTTGACGGAGACATGGAAGAAAAAGAA
CCGTCATCAACAGAAAAGAAAAGTGGGAAAAGCAAAATTGTTAAAAAAAA
GAAGGAAGACGATCAAGATGAACATAACACGGAAAGCGCTGATAACGGTC
CCCTACTGACCATACTATTTACAGTGGAAGAGGCAAATGGAAACTGTTTA
ACTATGGTGTTACCTTATGGCACGTTATGCCCAAAAGACATCGTGACAGG
GGAACTATTGGAGTCATCAAAACTCAAGAAGAACATGAAACTACTATGTC
TATACCCACATGATAAACTTTACTATCCTGCAGTGTTGACGAAAATTGGT
GGGAGGAAAAGAAAGTCAGAAACAACAGATGGAACGACTTCAGCGTTCGA
ATTATCAAATCGAACGTTTTTGTTCGAAAATTATTTCGTCCACAAACGCC
CCAAGAGATTTTATTTTCGAAAAAAGCGAGTTTGAAGGTGCATCTTCTAT
AAGAATAACTGGTCAGGATTTTTTCTTGCTACTGTGCTTACAAAACAAAA
TGGAACGCCCATCGAAAGACAGAAAACCTTCATCTAAATTTGCACAAGGA
GATCAAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031482XLOC_031482Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049654-proteinTCONS_00049654-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049654-exon-scaffold_164-1575043694:111263..111791TCONS_00049654-exon-scaffold_164-1575043694:111263..111791Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1575043694:110444..110686TCONS_00049654-exon-scaffold_164-1575043694:110444..110686Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1575043694:108934..108969TCONS_00049654-exon-scaffold_164-1575043694:108934..108969Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1575043694:108507..108575TCONS_00049654-exon-scaffold_164-1575043694:108507..108575Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1575043694:108001..108090TCONS_00049654-exon-scaffold_164-1575043694:108001..108090Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1575043694:107632..107695TCONS_00049654-exon-scaffold_164-1575043694:107632..107695Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1575043694:107458..107526TCONS_00049654-exon-scaffold_164-1575043694:107458..107526Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1575043694:107288..107355TCONS_00049654-exon-scaffold_164-1575043694:107288..107355Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1510915933:111263..111791TCONS_00049654-exon-scaffold_164-1510915933:111263..111791Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1510915933:110444..110686TCONS_00049654-exon-scaffold_164-1510915933:110444..110686Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1510915933:108934..108969TCONS_00049654-exon-scaffold_164-1510915933:108934..108969Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1510915933:108507..108575TCONS_00049654-exon-scaffold_164-1510915933:108507..108575Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1510915933:108001..108090TCONS_00049654-exon-scaffold_164-1510915933:108001..108090Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1510915933:107632..107695TCONS_00049654-exon-scaffold_164-1510915933:107632..107695Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1510915933:107458..107526TCONS_00049654-exon-scaffold_164-1510915933:107458..107526Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1510915933:107288..107355TCONS_00049654-exon-scaffold_164-1510915933:107288..107355Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1491911889:111263..111791TCONS_00049654-exon-scaffold_164-1491911889:111263..111791Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1491911889:110444..110686TCONS_00049654-exon-scaffold_164-1491911889:110444..110686Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1491911889:108934..108969TCONS_00049654-exon-scaffold_164-1491911889:108934..108969Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1491911889:108507..108575TCONS_00049654-exon-scaffold_164-1491911889:108507..108575Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1491911889:108001..108090TCONS_00049654-exon-scaffold_164-1491911889:108001..108090Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1491911889:107632..107695TCONS_00049654-exon-scaffold_164-1491911889:107632..107695Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1491911889:107458..107526TCONS_00049654-exon-scaffold_164-1491911889:107458..107526Clytia hemisphaericaexon
TCONS_00049654-exon-scaffold_164-1491911889:107288..107355TCONS_00049654-exon-scaffold_164-1491911889:107288..107355Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_164supercontigscaffold_164:107288..111791 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.262699	1.99997	0.239704	1.81835	2.2833	0.00404449	5.88623e-08	0	0.354278	0	0.768646	5.67333e-10	1.27121	0.0721954	0.000549679	9.72066e-10	0	0.00100175	5.14799e-07	0	0.179052	0.973128	0.59227	0	0	0	0.33913
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049654 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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