TCONS_00049607 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049607
Unique NameTCONS_00049607
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2053

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049607 ID=TCONS_00049607|Name=TCONS_00049607|organism=Clytia hemisphaerica|type=transcript|length=2053bp
ctagaAAGCAATTGCAATGACAGAAAGTAAAATAGCTATTAGTGTTGGTG
GTTATAGAGCAGACTTTGTTGACAGTCTACCAGAAGATTTAAAATGCATG
GTTTGCCATCTAGCTTACCGTGAACCAGTTCAATTGACCGCTTGTGGACA
TCGTTTGTGTCAAGTCTGTTTCAAAACCATGGAAAAGCATTACCACATGA
GTGATACACCTTTATTGTGTCCATTCGATAAATCGTTCATCGACAGCTCT
CAGGTGTTTCTTGACAGAGCTATTGGAAGACAAGTGTTGAGCTTGTTCGT
GAAATGTTCCAATCAATTAACTGGTTGTTCATGGACTGGAGAACTGAACC
AGCTACAGGACCATTTGTTAGATTGTGCACTGGAAGAGATCACTGACGAG
AAGCCAAAGTTAGCAGAATTGCAAGATGGGAAGATGGGCAGTAAAACATC
ACTTTATGATTTACCAACGCAGcaaatcaaccaatcagaaaagaGTCTTT
TACAAAAGCTTTTAGACAGAATAGAACGAAACGAAAATGCTACAAGAACG
ttaacaaaagaatttgaaCACTACAAAGAATACCAGAGTAAAGCTCTGGA
AACTTTGAATCAAGGTCTTGACGTGTTGACGTCATCACTGAAAATCATGG
AAGTTGAAACAGTACCTGATGTTGGATCTCGTTGCTCCACGCTGGAACAA
ATAGTGCACTCAATCGCTAATCTTCTCAAAGAAGTTTCTCTCAAAATGGA
TACAAAACTTGGCCAAAAAACTTACAATGAAGATTTAACGACAACCAGAC
AGGAGTTTGatacaaagtttgaaaatttgttcaaaaagatgaaaaaactg
GAGCTTGATTTGGTCGAATATGTAGACGGAGTTAACATGAATACTACACT
GGAAACGAAGGGAAATAGCCCAGCCTCCCCCATTGAATTGATGGATGGAG
AATTCCCTGAAGCCCGGATATCCGATTTGGAAAAGAAGATTGGAAGATTG
GAATTGATGAACCCAGTTTCGGGTTTCTTCGCGTGGACTTTAcgcgaatt
tgattattttcaaagcATGTTGCCATCTAGAAAGCGTGGGAAATTGAAGA
CGTCATGTTTCGGATTTGAATGCCGTATTGTTTTGTATTGGACCAACTTG
AAACGACGTAAACAACTCGGGCTAGGATTTGAAATTGTCGGACGGACGCC
TATGACCGTTGGCTACTTACCATtcttttgtgacgtcatcatatCGCTGT
TAGATCGTAACGGGGAAATTATGACTCGCAAAATCTCAAATTCGGATTTC
GTCCCTGGTAATCCAGTTGAAGATCAAGAGGTTATGTTGCGTGCGACTAT
CCCCGACTTTCTATGTTTTCCACAacataaaagttttgtttttgaagaca
cGTTAAGATTATTCGGATATTTCAAACCTTTTGATCCGTCCGTTTAATAA
GCTTTGGTAATAAAATCGAGTATTGTTATGTATCAGAACAGATGAATTTG
AGTcaacaaacattttttatcatatcTTAGTAATGAAATGACACGACTTT
GTCAATACAAAAATATGAATGAGGGATATCTGGTGTCTTGGCATAAACTT
GAATGATAACAAAGGCGAATTACGACGAAATTGGTCTTTTTTATTATCCT
TCTAACTTCGTTTCTTGGTGTTTGATATTTTTAAGGCGACCTGCCAAAAC
TCTATAAATAGANTTCGTTTCTTGGTGTTTGATATTTTTAAGGCGACCTG
CCAAAACTCTGtaaatagagaaaaaaagaaaaaaattcgtgtTTATCTAT
ATTTAGATTAggttttctattattttttctaGATTATATAGgtataaatt
ttgttgtttttatttaacaGAGCGATGTTAAGTACCAGCGACTTTACATG
AAAGCGTCAGTTGTACCGTGGGTTGGGGTCTGAAAGCGTCGGGACGCTTT
TTTCTTATATGGGCTTTGCCTAAAGACAAAAAGCGTAGTCGAATTTTTCA
GCATGCAGCTTGTACATGCACGAGGCCTCACCCAAGCGGTTCGCTATTTT
TTT
Run BLAST on NCBI

protein sequence of TCONS_00049607-protein

>TCONS_00049607-protein ID=TCONS_00049607-protein|Name=TCONS_00049607-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp
MTESKIAISVGGYRADFVDSLPEDLKCMVCHLAYREPVQLTACGHRLCQV
CFKTMEKHYHMSDTPLLCPFDKSFIDSSQVFLDRAIGRQVLSLFVKCSNQ
LTGCSWTGELNQLQDHLLDCALEEITDEKPKLAELQDGKMGSKTSLYDLP
TQQINQSEKSLLQKLLDRIERNENATRTLTKEFEHYKEYQSKALETLNQG
LDVLTSSLKIMEVETVPDVGSRCSTLEQIVHSIANLLKEVSLKMDTKLGQ
KTYNEDLTTTRQEFDTKFENLFKKMKKLELDLVEYVDGVNMNTTLETKGN
SPASPIELMDGEFPEARISDLEKKIGRLELMNPVSGFFAWTLREFDYFQS
MLPSRKRGKLKTSCFGFECRIVLYWTNLKRRKQLGLGFEIVGRTPMTVGY
LPFFCDVIISLLDRNGEIMTRKISNSDFVPGNPVEDQEVMLRATIPDFLC
FPQHKSFVFEDTLRLFGYFKPFDPSV
Run BLAST on NCBI

transcript from alignment at scaffold_161:197640..205325-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049607 ID=TCONS_00049607|Name=TCONS_00049607|organism=Clytia hemisphaerica|type=transcript|length=7686bp|location=Sequence derived from alignment at scaffold_161:197640..205325- (Clytia hemisphaerica)
CTAGAAAGCAATTGCAATGACAGAAAGTAAAATAGCTATTAGTGTTGGTG GTTATAGAGCAGACTTTGTTGACAGTCTACCAGAAGATTTAAAATGCATG GTTTGCCATCTAGCTTACCGTGAACCAGTTCAATTGACCGCTTGTGGACA TCGTTTGTGTCAAGTCTGTTTCAAAACCATGGAAAAGCATTACCACATGA GGTACAGTCTATTCATGATATTCATGACGTAATGTTTTCTACGGAAAGAC CCCGGTTTTTGCCAGTAGTGGCAAATTTTATACAACTTTTGTCCAGTTTA AATTTGCCACTACTTGCTAAAACCGGCTTATTTCCGTAGAAAACATTACG TCATGAATATCATGAATTCAAGAATTCGCTCAAAAGACTACTGTACTTGT ACACTTTGGGCAAATGCAATAGGGTACATATACAATTTTTTTATTCACGT TTTTTTTTATAAGAACATCCAAAATTTTTGAAGTCTTCGGATGTTATTAA CTTTTTGGGTTTTAAGCCTGAAAATGTTCTTAACATGTTCCTATTTTCAC CATTTTGTGAGAGTTTTGACCATTTTCCTAAGAAATCGGGTATTTTAGAG CCTACAAAGCCTTAAAATGTTCTTAACTTGTTCTTAACCCTATTTTTATC AGGGGGGGGGGTGTTTTCCACCCTCTTTTGCTAATAGCTCACTGAAAATT TTTTTTAACACTCTGAAAGTTTTTGACTTTTAATATAATTCTATTAGCAG CATGTATACCAAATTTTACAATTATACACTGACCAGATCAGGTTTTATGA CTTTTTCGTGCAGGCATATCATAAAATCCAGCTAAAACCCTGTAAAATTC CAAAATTTTAAATTTAGCAGAACTCTTGATCTAGGCATCAAACTGACTTC AAACTTTGACAGGTTTTAGGTATCAATGATAAAATTTAAAAAACATTTTA AAAATTTTCAAAAACTGCTGACGTCATTAAAAATGACGTCATTGTTTTTT GAAAAAATTTACTCATTTTCTGCATGGATTTTAAACCTCGATTTTATTAA TATGTTAAAAACCGGCAAATATGTCAAAGATATTCTTTTTGGCTTTTAGA AATTCAAAACAGAATTGAAAAATCTCCATTCGTTCAATTTTAATTGCTAT TTTATTGAATAGTACTTTTTCATTGGTCAGCGATAATTGTGAAACTTTGT GATGACGTCATCACCTTAATGATGACGTCATCTACCCAATTTTTTTTCTA TGAACTCTTTTTATGGTAGAGAACATTTCTGCCAAGTTTCAAGTCCATAT CTCTTCTAAATCAAAAGTTATGCAAGGCTGGTGGAAAACACCCCCCCTTG AGAATACAAAACCCTGAAAAGCCTGATAATAATAGGGTTAATATTTTGAC CATCGAAGCCTCTTATGTTCTTATATAATTTGTTCTTATAAAAAAACGTG TAAGATGATGTGCTGTTGGTGATGCTCGAGGACTCAAATGAGCCTATTTT CTTTCACTACCTCCTAAAGCTTTTTAGATAATTCAACCATGGCAAATGAT AGCCCTTGACCCAATGAGCGAGCATATGGTATAATATCTGGGGTGGTCAA AGCAAATTTTTCAGAAAATGAGCTAGAATGCTAAGCAACCCCTGATCCGA GAATTGAGGTTGTTTATAAAAAAAATGTGTAGTCGAAGGCTGAGTAGAAT CTGCTTTGCAGGATTTTGATAAATTTGCAGTTTGAATAGTAAACTGGTAT GCACCGGGGTTGGCCTAAATAATCATAGTGTGAAAATAATCATAGTGTGA AAATAGCCCCGGCTAAATTCTAGAAACATAGCCCCCACCTTCACAAAGCA AAATATGAAAATAAGTTTGTATGCAAATTCTCGATAAATTTATTGCGCCG CAGGGAAAATTTTTTTTCAAGAGGGATAAAACATAGTTTAAAATATCTTC AACCTATCAGCTCTGCCCCCATTACACAACACTCAGCCCCCTAGCAAGCT AGCCCCCAGTATTTTTTGAAAAATACAGCCCCAATCAAGCAAAAATGGTT TAGCCCCCCTAAGCTCAGAGGGGGGTGCATTCTATGAATAATTTTAAAGA TTCGCCTCTTAAACTCGATAGTAAATTTTTTAAAGACATTAACTGGCCGA ATGAGGCCAAAAATCGCAACATAAAGTCGTGAACGTTTGTATTTGTGAAC GTTTTAGGCTGTGTGGATAGTTACAAGGGAAGCAAGCAAACCGGCGTGCT CGATAATTTTAAATTTTAGTTCGATCCTTTTTATTCAACCTTAGTCAACA AAATTAAAAAAAAATCTTATTCCTTATTTACAACAAAAAAGGCAGGAATG CTGGCAGTGTACGAAAGATTTTACGCCTGTCCTCCATGGTATTGTAGAAC CGTGTTTTTGGGTATGAGAACTTAAAAATGGAAGTATTAATAAGTTTTTG GTGTATACTCTCCCTTCTCACAGACCCTCTAAGACTCCTTCCCACTGGAA AAATTGGCCAAAATATCGTACCCGCTAGAAAATTATCTTCTAACTTTGTG TTCCCACTGAAAATAATCAAATAAACCAATCCTCACTGCAAAATGTTATA CTAGTTTTCCGATCCCTACTGAATTTAAATCCCCAGCCATAGAAAATATG GGAATGTCATCCCCATCGAGTTTCAGTCTTTTATTTTTACCCCCATTGGC TGAAAAAATCCTGGTCCGGGTCTGTGAGAAGGGGGTTTGTGTATTTCAAA TGTTTCTCTTATAGTGATACACCTTTATTGTGTCCATTCGATAAATCGTT CATCGACAGCTCTCAGGTAAATCGATGTTTTCTTCGAGTATAATCATTGT TGTATAAATCCGTTAATAGTTCACTTATTGCCTTTTTCTACGAGAAACTC GCGAATTAGACCTAACTTCTTTATGAGATTAATAAGACTGACGTATTGTG CTTGTCAAAATAATTTTTGAAATTTTGAGTTCATCATTCGTTTCTAAAAA GAAGTCTCTCTTTTTGACACGCCGTGATTTGGGGTCCTGAATTGCATTTT CAAGATCTGTAAAGAAAGTTCGTTGTCCCTTCATACTTAACCAGTTAAAA TTCAACGTAGACCACCGATAGTAGAAATAAAGCAAAAAGTTAAATGGAAA CAAATTTTAAATTTTATACAAACTAAATTCCGTAACAATAATCGTATTAT CATATAACGCCTATACACTACTGTATTACACGCAATATAAACGACTCCAG TCTATAATAGCAGCGGAAAGAGCGTACAAATCAAGGCAAAAAAGTTGCGT CAAGTCAAACACATAGAGCACATATGTTTTTGTCGCAATTAAAATTCAAA GTCTTGTGCAACCAAGTCTTTGAAAAACGCTGTTTATAAGGAACTCATCG AGTACAATTTAATACGATTAAAAAGTTTTGTTAATAATTCTCAGTAGCGT AGACAAGACAAGAGGGGCGCAAAATTTGTGTAGGAGAGCAGATTTTTATG ACACAGTAATTATATTTTTATATATTTTTTGTCTTGTCAACGCTACTGAT TCTCATCGTTTTTCAGGTGTTTCTTGACAGAGCTATTGGAAGACAAGTGT TGAGCTTGTTCGTGAAATGTTCCAATCAATTAACTGGTTGTTCATGGACT GGAGAACTGAACCAGCTACAGGTTTTAATCAACTTTCTTTATTCCCCATC CTACTAAAGAAGGTCCTAACAATGTGTGCAGTTTCCTGGATTTCTACCCT TAAAGTAAAACCAGATGGGACCTCCCATCTTTTTTACATTCAGCTCATGA GGTCGAATTAGCTTAAGGTGGGACTTTGAACCATACACAAAGGTCTGTAT TCAGATTTAGGTTAGAACGGAGCCATAATTTCCATGGTTTCATGCTTTCA GGCACTCCCAACGAATTCGATTCCCTTGAAAATTTGTCTTGAGTTAGATT CACCATCGAGAAAAGACAAAGATTCGGATGATGAATATCTGAAACCTGTG TTTTGCACATGAATGCGCAACTTTATAAAAAGAAACAAAGAAATATAAGA AATCTAGTGAATTTTAATGGAATGAAGAATAGTCTGCAGTATTAAATCCG GAAAAAGCTCTTACTTTACAGCCTTCCTCTGTCAAACCAACTAGGCACCC AAACGAACAGGTAGCCTAAATAAATTGCTGAATTTTGGCACCCTACCGAT TGGAACTAGGTTTCCTTTAGAAATGGTGGGGGGAGGGGTTATATCATTTA CTTCTTGTAAAGGGTCATCCCAATAGATATTGTCAGCCACAATTGGAGTT TGAACCTGATTGAACCGCGCCTCTATGGGTGCTACCAGGTGGTGCAAGGT TCGCAGCGCTCCTTTGTCCCTACTGGAGGTGTACAGACAAAAATGAGCGA CACGTGTGACGTACCCCTTCCTCTGGAATAGCCTTAAAAAAATTGTCATA TTAGTGATTTATTTCAATTTTTTCATTTACAGGACCATTTGTTAGATTGT GCACTGGAAGAGATCACTGACGAGAAGGTTTGATTGGCTTGATTTTGACT TGAATTTATGTTTACAAAGTTTGATATGAAATTAAATTGTAAATTTGATA TTTTTTCAATTCCATTAGGTCCAGATATTTTTAAGTTTTTGGGAAATTAC TATTTTTGTCCTTTTTTGAGATCTGTCAAATTTGGATCATTCCATAAATC ACTTATGATACAATAATTGGGCTGTTCCATTTAAAATCCATACAGGGTTG GACGTACCTTTGCAAGCCACAAATAATTCTTGAAACTACATGGATACCCC GTGGAAAATAGCAAAATTTGCCTTGACTCCAAAACCCTTGGAAATATTCT TAAAGTGAGGGTGGTCGAACTAAAATTAATATTTTACCCCCTGGAAATTT TAGAATTCTATCTCCTGAAAAAATAAAGACTTTACTCAGAACCCTGGAGA TGTGCCTCCCCCTTGCAAGGACATAAAATGCGATGGCCCATTCATAATAA CGTCAATTCTTCTCCTTTTATTTTATTTCACAGCCAAAGTTAGCAGAATT GCAAGATGGGAAGATGGGCAGTAAAACATCACTTTATGATTTACCAGTAA ACTTTTCTCTACATACATAATTGTTTCTGTAGTTTAACTTGATTGCTGTA CTATAAATCAGAGAGGAAAACTAAAAAAAAAGAGTCAGTTTTACATCCGA ATTTTTTTGTCCTTATTTTTGTAAACCATCTTTTGTTTTAAAAGCCTGAC TTTTGTCATTGCAATTCCAACGATGAATGCTGTAGTCTACACAGCTCAAG AGTTTGAATAATTCTTTTTGAAGAGTAGGAGTTTAAGGGTCGAAGAGCCA AGGTAGATATGATATTACCCAGATTGTTCCATATTTTTTCCACTGTAAAC TTGAATTGATTGTTTTGCACTTCTAGTATGAATTAAACTGCAAACACCCC CTGATATGTTTTGATATAGGGATGCTAATCGTGTATGAAATTCCCGTCCG AGAATTGCCCAGAATTGCCCAGAATTTGGGGTAACCTGTTTGAATTTTCT TAAAAGGTTTAGAAATCAAAAGATTGTATTAACCTCTAGCCATTCAAATT TTTGATTCAAATTTAATAAAATTTAAAGATCTCTCATATAAAACTTACTA ATCAAGCAAATCAAGTTTCTAAAATTCAAAAAAACACAGGCGAGGATAAT TCTTGAACGGGAATTCTATGCACGTTGCGTATCCCCTATATCAGAGGGGA TACATGGAGTATAGGTATAAATTAATGTCAAATTCATCTTTTACAGACGC AGCAAATCAACCAATCAGAAAAGAGTCTTTTACAAAAGCTTTTAGACAGA ATAGAACGAAACGAAAATGCTACAAGAACGTTAACAAAAGAATTTGAACA CTACAAAGAATACCAGAGTAAAGCTCTGGAAACTTTGAATCAAGGTGATT TTCTATTATTCGACGGAATATTTCTGACTCTCAGTCCCTGTCATGGGGAA AACCATTCGTAAAATACTTTCTAAAATTCGAATTATTCTGTATTTTGAAC AAATTAGACTTCTAGTTTGACTTCGAATAAGCGAGAGTAAACAGTACCTT TTCCTTATAATAGCACAAAATAAGGCTAGAAATTCCTTTTAGGGACGGGT GTTTGTTTTATTTTGTTCTTAAGGTTTTCAGCCAAAGTTCAGCCTTGTGT TACTATATTTAATCCTTTTAAAGTGTCTTTTTCATTTTCTCTTTAAGGTC TTGACGTGTTGACGTCATCACTGAAAATCATGGAAGTTGAAACAGTACCT GATGTTGGATCTCGTTGCTCCACGCTGGAACAAATAGTGCACTCAATCGC TAATCTTCTCAAAGAAGTTTCTCTCAAAATGGATACAAAACTTGGCCAAA AAACTTACAATGAAGATTTAACGACAACCAGACAGGAGTTTGATACAAAG TTTGAAAATTTGTTCAAAAAGATGAAAAAACTGGAGCTTGATTTGGTCGA ATATGTAGACGGAGTTAACATGAATACTACACTGGAAACGAAGGGAAATA GCCCAGCCTCCCCCATTGAATTGATGGATGGAGAATTCCCTGAAGCCCGG ATATCCGATTTGGAAAAGAAGATTGGAAGATTGGAATTGATGAACCCAGT TTCGGGTTTCTTCGCGTGGACTTTACGCGAATTTGATTATTTTCAAAGCA TGTTGCCATCTAGAAAGCGTGGGAAATTGAAGACGTCATGTTTCGGATTT GAATGCCGTATTGTTTTGTATTGGACCAACTTGAAACGACGTAAACAACT CGGGCTAGGATTTGAAATTGTCGGACGGACGCCTATGACCGTTGGCTACT TACCATTCTTTTGTGACGTCATCATATCGCTGTTAGATCGTAACGGGGAA ATTATGACTCGCAAAATCTCAAATTCGGATTTCGTCCCTGGTAATCCAGT TGAAGATCAAGAGGTTATGTTGCGTGCGACTATCCCCGACTTTCTATGTT TTCCACAACATAAAAGTTTTGTTTTTGAAGACACGTTAAGATTATTCGGA TATTTCAAACCTTTTGATCCGTCCGTTTAATAAGCTTTGGTAATAAAATC GAGTATTGTTATGTATCAGAACAGATGAATTTGAGTCAACAAACATTTTT TATCATATCTTAGTAATGAAATGACACGACTTTGTCAATACAAAAATATG AATGAGGGATATCTGGTGTCTTGGCATAAACTTGAATGATAACAAAGGCG AATTACGACGAAATTGGTCTTTTTTATTATCCTTCTAACTTCGTTTCTTG GTGTTTGATATTTTTAAGGCGACCTGCCAAAACTCTATAAATAGANTTCG TTTCTTGGTGTTTGATATTTTTAAGGCGACCTGCCAAAACTCTGTAAATA GAGAAAAAAAGAAAAAAATTCGTGTTTATCTATATTTAGATTAGGTTTTC TATTATTTTTTCTAGATTATATAGGTATAAATTTTGTTGTTTTTATTTAA CAGAGCGATGTTAAGTACCAGCGACTTTACATGAAAGCGTCAGTTGTACC GTGGGTTGGGGTCTGAAAGCGTCGGGACGCTTTTTTCTTATATGGGCTTT GCCTAAAGACAAAAAGCGTAGTCGAATTTTTCAGCATGCAGCTTGTACAT GCACGAGGCCTCACCCAAGCGGTTCGCTATTTTTTT

Coding sequence (CDS) from alignment at scaffold_161:197640..205325-

>TCONS_00049607 ID=TCONS_00049607|Name=TCONS_00049607|organism=Clytia hemisphaerica|type=CDS|length=10017bp|location=Sequence derived from alignment at scaffold_161:197640..205325- (Clytia hemisphaerica)
GTCTTGACGTGTTGACGTCATCACTGAAAATCATGGAAGTTGAAACAGTA
CCTGATGTTGGATCTCGTTGCTCCACGCTGGAACAAATAGTGCACTCAAT
CGCTAATCTTCTCAAAGAAGTTTCTCTCAAAATGGATACAAAACTTGGCC
AAAAAACTTACAATGAAGATTTAACGACAACCAGACAGGAGTTTGATACA
AAGTTTGAAAATTTGTTCAAAAAGATGAAAAAACTGGAGCTTGATTTGGT
CGAATATGTAGACGGAGTTAACATGAATACTACACTGGAAACGAAGGGAA
ATAGCCCAGCCTCCCCCATTGAATTGATGGATGGAGAATTCCCTGAAGCC
CGGATATCCGATTTGGAAAAGAAGATTGGAAGATTGGAATTGATGAACCC
AGTTTCGGGTTTCTTCGCGTGGACTTTACGCGAATTTGATTATTTTCAAA
GCATGTTGCCATCTAGAAAGCGTGGGAAATTGAAGACGTCATGTTTCGGA
TTTGAATGCCGTATTGTTTTGTATTGGACCAACTTGAAACGACGTAAACA
ACTCGGGCTAGGATTTGAAATTGTCGGACGGACGCCTATGACCGTTGGCT
ACTTACCATTCTTTTGTGACGTCATCATATCGCTGTTAGATCGTAACGGG
GAAATTATGACTCGCAAAATCTCAAATTCGGATTTCGTCCCTGGTAATCC
AGTTGAAGATCAAGAGGTTATGTTGCGTGCGACTATCCCCGACTTTCTAT
GTTTTCCACAACATAAAAGTTTTGTTTTTGAAGACACGTTAAGATTATTC
GGATATTTCAAACCTTTTGATCCGTCCGTTTAAACGCAGCAAATCAACCA
ATCAGAAAAGAGTCTTTTACAAAAGCTTTTAGACAGAATAGAACGAAACG
AAAATGCTACAAGAACGTTAACAAAAGAATTTGAACACTACAAAGAATAC
CAGAGTAAAGCTCTGGAAACTTTGAATCAAGCCAAAGTTAGCAGAATTGC
AAGATGGGAAGATGGGCAGTAAAACATCACTTTATGATTTACCAGACCAT
TTGTTAGATTGTGCACTGGAAGAGATCACTGACGAGAAGGTGTTTCTTGA
CAGAGCTATTGGAAGACAAGTGTTGAGCTTGTTCGTGAAATGTTCCAATC
AATTAACTGGTTGTTCATGGACTGGAGAACTGAACCAGCTACAGTGATAC
ACCTTTATTGTGTCCATTCGATAAATCGTTCATCGACAGCTCTCAGATGA
CAGAAAGTAAAATAGCTATTAGTGTTGGTGGTTATAGAGCAGACTTTGTT
GACAGTCTACCAGAAGATTTAAAATGCATGGTTTGCCATCTAGCTTACCG
TGAACCAGTTCAATTGACCGCTTGTGGACATCGTTTGTGTCAAGTCTGTT
TCAAAACCATGGAAAAGCATTACCACATGAGGTCTTGACGTGTTGACGTC
ATCACTGAAAATCATGGAAGTTGAAACAGTACCTGATGTTGGATCTCGTT
GCTCCACGCTGGAACAAATAGTGCACTCAATCGCTAATCTTCTCAAAGAA
GTTTCTCTCAAAATGGATACAAAACTTGGCCAAAAAACTTACAATGAAGA
TTTAACGACAACCAGACAGGAGTTTGATACAAAGTTTGAAAATTTGTTCA
AAAAGATGAAAAAACTGGAGCTTGATTTGGTCGAATATGTAGACGGAGTT
AACATGAATACTACACTGGAAACGAAGGGAAATAGCCCAGCCTCCCCCAT
TGAATTGATGGATGGAGAATTCCCTGAAGCCCGGATATCCGATTTGGAAA
AGAAGATTGGAAGATTGGAATTGATGAACCCAGTTTCGGGTTTCTTCGCG
TGGACTTTACGCGAATTTGATTATTTTCAAAGCATGTTGCCATCTAGAAA
GCGTGGGAAATTGAAGACGTCATGTTTCGGATTTGAATGCCGTATTGTTT
TGTATTGGACCAACTTGAAACGACGTAAACAACTCGGGCTAGGATTTGAA
ATTGTCGGACGGACGCCTATGACCGTTGGCTACTTACCATTCTTTTGTGA
CGTCATCATATCGCTGTTAGATCGTAACGGGGAAATTATGACTCGCAAAA
TCTCAAATTCGGATTTCGTCCCTGGTAATCCAGTTGAAGATCAAGAGGTT
ATGTTGCGTGCGACTATCCCCGACTTTCTATGTTTTCCACAACATAAAAG
TTTTGTTTTTGAAGACACGTTAAGATTATTCGGATATTTCAAACCTTTTG
ATCCGTCCGTTTAAACGCAGCAAATCAACCAATCAGAAAAGAGTCTTTTA
CAAAAGCTTTTAGACAGAATAGAACGAAACGAAAATGCTACAAGAACGTT
AACAAAAGAATTTGAACACTACAAAGAATACCAGAGTAAAGCTCTGGAAA
CTTTGAATCAAGCCAAAGTTAGCAGAATTGCAAGATGGGAAGATGGGCAG
TAAAACATCACTTTATGATTTACCAGACCATTTGTTAGATTGTGCACTGG
AAGAGATCACTGACGAGAAGGTGTTTCTTGACAGAGCTATTGGAAGACAA
GTGTTGAGCTTGTTCGTGAAATGTTCCAATCAATTAACTGGTTGTTCATG
GACTGGAGAACTGAACCAGCTACAGTGATACACCTTTATTGTGTCCATTC
GATAAATCGTTCATCGACAGCTCTCAGATGACAGAAAGTAAAATAGCTAT
TAGTGTTGGTGGTTATAGAGCAGACTTTGTTGACAGTCTACCAGAAGATT
TAAAATGCATGGTTTGCCATCTAGCTTACCGTGAACCAGTTCAATTGACC
GCTTGTGGACATCGTTTGTGTCAAGTCTGTTTCAAAACCATGGAAAAGCA
TTACCACATGAGGTCTTGACGTGTTGACGTCATCACTGAAAATCATGGAA
GTTGAAACAGTACCTGATGTTGGATCTCGTTGCTCCACGCTGGAACAAAT
AGTGCACTCAATCGCTAATCTTCTCAAAGAAGTTTCTCTCAAAATGGATA
CAAAACTTGGCCAAAAAACTTACAATGAAGATTTAACGACAACCAGACAG
GAGTTTGATACAAAGTTTGAAAATTTGTTCAAAAAGATGAAAAAACTGGA
GCTTGATTTGGTCGAATATGTAGACGGAGTTAACATGAATACTACACTGG
AAACGAAGGGAAATAGCCCAGCCTCCCCCATTGAATTGATGGATGGAGAA
TTCCCTGAAGCCCGGATATCCGATTTGGAAAAGAAGATTGGAAGATTGGA
ATTGATGAACCCAGTTTCGGGTTTCTTCGCGTGGACTTTACGCGAATTTG
ATTATTTTCAAAGCATGTTGCCATCTAGAAAGCGTGGGAAATTGAAGACG
TCATGTTTCGGATTTGAATGCCGTATTGTTTTGTATTGGACCAACTTGAA
ACGACGTAAACAACTCGGGCTAGGATTTGAAATTGTCGGACGGACGCCTA
TGACCGTTGGCTACTTACCATTCTTTTGTGACGTCATCATATCGCTGTTA
GATCGTAACGGGGAAATTATGACTCGCAAAATCTCAAATTCGGATTTCGT
CCCTGGTAATCCAGTTGAAGATCAAGAGGTTATGTTGCGTGCGACTATCC
CCGACTTTCTATGTTTTCCACAACATAAAAGTTTTGTTTTTGAAGACACG
TTAAGATTATTCGGATATTTCAAACCTTTTGATCCGTCCGTTTAAACGCA
GCAAATCAACCAATCAGAAAAGAGTCTTTTACAAAAGCTTTTAGACAGAA
TAGAACGAAACGAAAATGCTACAAGAACGTTAACAAAAGAATTTGAACAC
TACAAAGAATACCAGAGTAAAGCTCTGGAAACTTTGAATCAAGCCAAAGT
TAGCAGAATTGCAAGATGGGAAGATGGGCAGTAAAACATCACTTTATGAT
TTACCAGACCATTTGTTAGATTGTGCACTGGAAGAGATCACTGACGAGAA
GGTGTTTCTTGACAGAGCTATTGGAAGACAAGTGTTGAGCTTGTTCGTGA
AATGTTCCAATCAATTAACTGGTTGTTCATGGACTGGAGAACTGAACCAG
CTACAGTGATACACCTTTATTGTGTCCATTCGATAAATCGTTCATCGACA
GCTCTCAGATGACAGAAAGTAAAATAGCTATTAGTGTTGGTGGTTATAGA
GCAGACTTTGTTGACAGTCTACCAGAAGATTTAAAATGCATGGTTTGCCA
TCTAGCTTACCGTGAACCAGTTCAATTGACCGCTTGTGGACATCGTTTGT
GTCAAGTCTGTTTCAAAACCATGGAAAAGCATTACCACATGAGGTCTTGA
CGTGTTGACGTCATCACTGAAAATCATGGAAGTTGAAACAGTACCTGATG
TTGGATCTCGTTGCTCCACGCTGGAACAAATAGTGCACTCAATCGCTAAT
CTTCTCAAAGAAGTTTCTCTCAAAATGGATACAAAACTTGGCCAAAAAAC
TTACAATGAAGATTTAACGACAACCAGACAGGAGTTTGATACAAAGTTTG
AAAATTTGTTCAAAAAGATGAAAAAACTGGAGCTTGATTTGGTCGAATAT
GTAGACGGAGTTAACATGAATACTACACTGGAAACGAAGGGAAATAGCCC
AGCCTCCCCCATTGAATTGATGGATGGAGAATTCCCTGAAGCCCGGATAT
CCGATTTGGAAAAGAAGATTGGAAGATTGGAATTGATGAACCCAGTTTCG
GGTTTCTTCGCGTGGACTTTACGCGAATTTGATTATTTTCAAAGCATGTT
GCCATCTAGAAAGCGTGGGAAATTGAAGACGTCATGTTTCGGATTTGAAT
GCCGTATTGTTTTGTATTGGACCAACTTGAAACGACGTAAACAACTCGGG
CTAGGATTTGAAATTGTCGGACGGACGCCTATGACCGTTGGCTACTTACC
ATTCTTTTGTGACGTCATCATATCGCTGTTAGATCGTAACGGGGAAATTA
TGACTCGCAAAATCTCAAATTCGGATTTCGTCCCTGGTAATCCAGTTGAA
GATCAAGAGGTTATGTTGCGTGCGACTATCCCCGACTTTCTATGTTTTCC
ACAACATAAAAGTTTTGTTTTTGAAGACACGTTAAGATTATTCGGATATT
TCAAACCTTTTGATCCGTCCGTTTAAACGCAGCAAATCAACCAATCAGAA
AAGAGTCTTTTACAAAAGCTTTTAGACAGAATAGAACGAAACGAAAATGC
TACAAGAACGTTAACAAAAGAATTTGAACACTACAAAGAATACCAGAGTA
AAGCTCTGGAAACTTTGAATCAAGCCAAAGTTAGCAGAATTGCAAGATGG
GAAGATGGGCAGTAAAACATCACTTTATGATTTACCAGACCATTTGTTAG
ATTGTGCACTGGAAGAGATCACTGACGAGAAGGTGTTTCTTGACAGAGCT
ATTGGAAGACAAGTGTTGAGCTTGTTCGTGAAATGTTCCAATCAATTAAC
TGGTTGTTCATGGACTGGAGAACTGAACCAGCTACAGTGATACACCTTTA
TTGTGTCCATTCGATAAATCGTTCATCGACAGCTCTCAGATGACAGAAAG
TAAAATAGCTATTAGTGTTGGTGGTTATAGAGCAGACTTTGTTGACAGTC
TACCAGAAGATTTAAAATGCATGGTTTGCCATCTAGCTTACCGTGAACCA
GTTCAATTGACCGCTTGTGGACATCGTTTGTGTCAAGTCTGTTTCAAAAC
CATGGAAAAGCATTACCACATGAGGTCTTGACGTGTTGACGTCATCACTG
AAAATCATGGAAGTTGAAACAGTACCTGATGTTGGATCTCGTTGCTCCAC
GCTGGAACAAATAGTGCACTCAATCGCTAATCTTCTCAAAGAAGTTTCTC
TCAAAATGGATACAAAACTTGGCCAAAAAACTTACAATGAAGATTTAACG
ACAACCAGACAGGAGTTTGATACAAAGTTTGAAAATTTGTTCAAAAAGAT
GAAAAAACTGGAGCTTGATTTGGTCGAATATGTAGACGGAGTTAACATGA
ATACTACACTGGAAACGAAGGGAAATAGCCCAGCCTCCCCCATTGAATTG
ATGGATGGAGAATTCCCTGAAGCCCGGATATCCGATTTGGAAAAGAAGAT
TGGAAGATTGGAATTGATGAACCCAGTTTCGGGTTTCTTCGCGTGGACTT
TACGCGAATTTGATTATTTTCAAAGCATGTTGCCATCTAGAAAGCGTGGG
AAATTGAAGACGTCATGTTTCGGATTTGAATGCCGTATTGTTTTGTATTG
GACCAACTTGAAACGACGTAAACAACTCGGGCTAGGATTTGAAATTGTCG
GACGGACGCCTATGACCGTTGGCTACTTACCATTCTTTTGTGACGTCATC
ATATCGCTGTTAGATCGTAACGGGGAAATTATGACTCGCAAAATCTCAAA
TTCGGATTTCGTCCCTGGTAATCCAGTTGAAGATCAAGAGGTTATGTTGC
GTGCGACTATCCCCGACTTTCTATGTTTTCCACAACATAAAAGTTTTGTT
TTTGAAGACACGTTAAGATTATTCGGATATTTCAAACCTTTTGATCCGTC
CGTTTAAACGCAGCAAATCAACCAATCAGAAAAGAGTCTTTTACAAAAGC
TTTTAGACAGAATAGAACGAAACGAAAATGCTACAAGAACGTTAACAAAA
GAATTTGAACACTACAAAGAATACCAGAGTAAAGCTCTGGAAACTTTGAA
TCAAGCCAAAGTTAGCAGAATTGCAAGATGGGAAGATGGGCAGTAAAACA
TCACTTTATGATTTACCAGACCATTTGTTAGATTGTGCACTGGAAGAGAT
CACTGACGAGAAGGTGTTTCTTGACAGAGCTATTGGAAGACAAGTGTTGA
GCTTGTTCGTGAAATGTTCCAATCAATTAACTGGTTGTTCATGGACTGGA
GAACTGAACCAGCTACAGTGATACACCTTTATTGTGTCCATTCGATAAAT
CGTTCATCGACAGCTCTCAGATGACAGAAAGTAAAATAGCTATTAGTGTT
GGTGGTTATAGAGCAGACTTTGTTGACAGTCTACCAGAAGATTTAAAATG
CATGGTTTGCCATCTAGCTTACCGTGAACCAGTTCAATTGACCGCTTGTG
GACATCGTTTGTGTCAAGTCTGTTTCAAAACCATGGAAAAGCATTACCAC
ATGAGGTCTTGACGTGTTGACGTCATCACTGAAAATCATGGAAGTTGAAA
CAGTACCTGATGTTGGATCTCGTTGCTCCACGCTGGAACAAATAGTGCAC
TCAATCGCTAATCTTCTCAAAGAAGTTTCTCTCAAAATGGATACAAAACT
TGGCCAAAAAACTTACAATGAAGATTTAACGACAACCAGACAGGAGTTTG
ATACAAAGTTTGAAAATTTGTTCAAAAAGATGAAAAAACTGGAGCTTGAT
TTGGTCGAATATGTAGACGGAGTTAACATGAATACTACACTGGAAACGAA
GGGAAATAGCCCAGCCTCCCCCATTGAATTGATGGATGGAGAATTCCCTG
AAGCCCGGATATCCGATTTGGAAAAGAAGATTGGAAGATTGGAATTGATG
AACCCAGTTTCGGGTTTCTTCGCGTGGACTTTACGCGAATTTGATTATTT
TCAAAGCATGTTGCCATCTAGAAAGCGTGGGAAATTGAAGACGTCATGTT
TCGGATTTGAATGCCGTATTGTTTTGTATTGGACCAACTTGAAACGACGT
AAACAACTCGGGCTAGGATTTGAAATTGTCGGACGGACGCCTATGACCGT
TGGCTACTTACCATTCTTTTGTGACGTCATCATATCGCTGTTAGATCGTA
ACGGGGAAATTATGACTCGCAAAATCTCAAATTCGGATTTCGTCCCTGGT
AATCCAGTTGAAGATCAAGAGGTTATGTTGCGTGCGACTATCCCCGACTT
TCTATGTTTTCCACAACATAAAAGTTTTGTTTTTGAAGACACGTTAAGAT
TATTCGGATATTTCAAACCTTTTGATCCGTCCGTTTAAACGCAGCAAATC
AACCAATCAGAAAAGAGTCTTTTACAAAAGCTTTTAGACAGAATAGAACG
AAACGAAAATGCTACAAGAACGTTAACAAAAGAATTTGAACACTACAAAG
AATACCAGAGTAAAGCTCTGGAAACTTTGAATCAAGCCAAAGTTAGCAGA
ATTGCAAGATGGGAAGATGGGCAGTAAAACATCACTTTATGATTTACCAG
ACCATTTGTTAGATTGTGCACTGGAAGAGATCACTGACGAGAAGGTGTTT
CTTGACAGAGCTATTGGAAGACAAGTGTTGAGCTTGTTCGTGAAATGTTC
CAATCAATTAACTGGTTGTTCATGGACTGGAGAACTGAACCAGCTACAGT
GATACACCTTTATTGTGTCCATTCGATAAATCGTTCATCGACAGCTCTCA
GATGACAGAAAGTAAAATAGCTATTAGTGTTGGTGGTTATAGAGCAGACT
TTGTTGACAGTCTACCAGAAGATTTAAAATGCATGGTTTGCCATCTAGCT
TACCGTGAACCAGTTCAATTGACCGCTTGTGGACATCGTTTGTGTCAAGT
CTGTTTCAAAACCATGGAAAAGCATTACCACATGAGGTCTTGACGTGTTG
ACGTCATCACTGAAAATCATGGAAGTTGAAACAGTACCTGATGTTGGATC
TCGTTGCTCCACGCTGGAACAAATAGTGCACTCAATCGCTAATCTTCTCA
AAGAAGTTTCTCTCAAAATGGATACAAAACTTGGCCAAAAAACTTACAAT
GAAGATTTAACGACAACCAGACAGGAGTTTGATACAAAGTTTGAAAATTT
GTTCAAAAAGATGAAAAAACTGGAGCTTGATTTGGTCGAATATGTAGACG
GAGTTAACATGAATACTACACTGGAAACGAAGGGAAATAGCCCAGCCTCC
CCCATTGAATTGATGGATGGAGAATTCCCTGAAGCCCGGATATCCGATTT
GGAAAAGAAGATTGGAAGATTGGAATTGATGAACCCAGTTTCGGGTTTCT
TCGCGTGGACTTTACGCGAATTTGATTATTTTCAAAGCATGTTGCCATCT
AGAAAGCGTGGGAAATTGAAGACGTCATGTTTCGGATTTGAATGCCGTAT
TGTTTTGTATTGGACCAACTTGAAACGACGTAAACAACTCGGGCTAGGAT
TTGAAATTGTCGGACGGACGCCTATGACCGTTGGCTACTTACCATTCTTT
TGTGACGTCATCATATCGCTGTTAGATCGTAACGGGGAAATTATGACTCG
CAAAATCTCAAATTCGGATTTCGTCCCTGGTAATCCAGTTGAAGATCAAG
AGGTTATGTTGCGTGCGACTATCCCCGACTTTCTATGTTTTCCACAACAT
AAAAGTTTTGTTTTTGAAGACACGTTAAGATTATTCGGATATTTCAAACC
TTTTGATCCGTCCGTTTAAACGCAGCAAATCAACCAATCAGAAAAGAGTC
TTTTACAAAAGCTTTTAGACAGAATAGAACGAAACGAAAATGCTACAAGA
ACGTTAACAAAAGAATTTGAACACTACAAAGAATACCAGAGTAAAGCTCT
GGAAACTTTGAATCAAGCCAAAGTTAGCAGAATTGCAAGATGGGAAGATG
GGCAGTAAAACATCACTTTATGATTTACCAGACCATTTGTTAGATTGTGC
ACTGGAAGAGATCACTGACGAGAAGGTGTTTCTTGACAGAGCTATTGGAA
GACAAGTGTTGAGCTTGTTCGTGAAATGTTCCAATCAATTAACTGGTTGT
TCATGGACTGGAGAACTGAACCAGCTACAGTGATACACCTTTATTGTGTC
CATTCGATAAATCGTTCATCGACAGCTCTCAGATGACAGAAAGTAAAATA
GCTATTAGTGTTGGTGGTTATAGAGCAGACTTTGTTGACAGTCTACCAGA
AGATTTAAAATGCATGGTTTGCCATCTAGCTTACCGTGAACCAGTTCAAT
TGACCGCTTGTGGACATCGTTTGTGTCAAGTCTGTTTCAAAACCATGGAA
AAGCATTACCACATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031450XLOC_031450Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049607-proteinTCONS_00049607-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049607-exon-scaffold_161-1575043694:205125..205325TCONS_00049607-exon-scaffold_161-1575043694:205125..205325Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1575043694:202510..202561TCONS_00049607-exon-scaffold_161-1575043694:202510..202561Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1575043694:201655..201759TCONS_00049607-exon-scaffold_161-1575043694:201655..201759Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1575043694:200799..200843TCONS_00049607-exon-scaffold_161-1575043694:200799..200843Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1575043694:200230..200292TCONS_00049607-exon-scaffold_161-1575043694:200230..200292Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1575043694:199382..199529TCONS_00049607-exon-scaffold_161-1575043694:199382..199529Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1575043694:197640..199078TCONS_00049607-exon-scaffold_161-1575043694:197640..199078Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1510915933:205125..205325TCONS_00049607-exon-scaffold_161-1510915933:205125..205325Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1510915933:202510..202561TCONS_00049607-exon-scaffold_161-1510915933:202510..202561Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1510915933:201655..201759TCONS_00049607-exon-scaffold_161-1510915933:201655..201759Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1510915933:200799..200843TCONS_00049607-exon-scaffold_161-1510915933:200799..200843Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1510915933:200230..200292TCONS_00049607-exon-scaffold_161-1510915933:200230..200292Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1510915933:199382..199529TCONS_00049607-exon-scaffold_161-1510915933:199382..199529Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1510915933:197640..199078TCONS_00049607-exon-scaffold_161-1510915933:197640..199078Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1491911889:205125..205325TCONS_00049607-exon-scaffold_161-1491911889:205125..205325Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1491911889:202510..202561TCONS_00049607-exon-scaffold_161-1491911889:202510..202561Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1491911889:201655..201759TCONS_00049607-exon-scaffold_161-1491911889:201655..201759Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1491911889:200799..200843TCONS_00049607-exon-scaffold_161-1491911889:200799..200843Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1491911889:200230..200292TCONS_00049607-exon-scaffold_161-1491911889:200230..200292Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1491911889:199382..199529TCONS_00049607-exon-scaffold_161-1491911889:199382..199529Clytia hemisphaericaexon
TCONS_00049607-exon-scaffold_161-1491911889:197640..199078TCONS_00049607-exon-scaffold_161-1491911889:197640..199078Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_161supercontigscaffold_161:197640..205325 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
63.7791 57.6169 47.9684 43.7541 1.4789 0.820103 0.865742 0.856811 1.2646 1.18485 1.36446 1.12758 1.35634 1.30226 1.98832 2.13378 3.63965 4.91482 0.429494 0.406631 2.9205 2.66757 17.5595 14.5402 7.04392 6.08374 1.74116 1.99899 8.90479 8.81149
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Blast
BLAST of TCONS_00049607 vs. Swiss-Prot (Human)
Match: TRAF5 (TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.191e-16
Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = 2
Query:   65 FVDSLPEDLKCMVCHLAYREPVQLTACGHRLCQVCFKTMEKHYHMSDTPLLCPFDKSFIDSSQVFLDRAIGRQVLSLFVKCSNQLTGCSWTGELNQLQDHLLDCALEEI 391
            FV+ L E  KC  CH     P Q T CGHR CQ C  ++ +   ++  P+ CP DK  I S +VF D    R+VL+L+V CSN   GC+    L + QDHL  C  + +
Sbjct:   35 FVERLEERYKCAFCHSVLHNPHQ-TGCGHRFCQHCILSLRE---LNTVPI-CPVDKEVIKSQEVFKDNCCKREVLNLYVYCSN-APGCNAKVILGRYQDHLQQCLFQPV 137          
The following BLAST results are available for this feature:
BLAST of TCONS_00049607 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF58.191e-1640.37TNF receptor-associated factor 5 OS=Homo sapiens G... [more]
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