TCONS_00049597 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049597
Unique NameTCONS_00049597
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3924

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049597 ID=TCONS_00049597|Name=TCONS_00049597|organism=Clytia hemisphaerica|type=transcript|length=3924bp
TCAAAGGCCTCCAAGGTTTTCTAACCTAATAACAGAAATGAGGAGTTTTC
TTAACACAACACTCTGAAGTTCTAAAGATCACTGAAAGCTAACATTTGAG
GAAAATGGTCATGCTTTtacgaaaaattttcaattaacTTTTTGACTTGT
GCCAAAAGCATGAAAATCATAACCAGCTGAAATAGCACTTCATGAAAAAT
GtgttttatagataggaattaaAATTCTTTCCCATAATGGTTTGGAACTG
GAACTGACTGGaaagcttttttcaaatttgaggcAAAAGATAAAATGgat
gtttgttattgttgtaAAACTCAAATTGCTTGGtcttaatttttaaaaac
tttgtaaGTATTCTGATGGTTGGTATCCATTTTCTTATAGCTTCAATTTT
CCCAATGTTACTTTAGTATGTCTACTATATTGAAAACCCTATTATTTAGA
AAGATACATTTAGttacaaattcttcaaaatatcaaaaacataCACATGA
CCTTTAAAGATGGCAAGCTACACAGCAGGACAATTTGCCAATTACAACAG
TTTAACAGACAAAAATCTCAGTGGATACTTTGCAAACACACAGATGAGAA
AACATTTAGTCAGATCTGGTCTGATAAcaaagaatggaaaaataacAAGT
GAAAATTCATACAGATTGAAAATTGCTAAACGAGAGCATAGAGAACATGT
CAAAGATCTTTTGGCAACAGCCATTGTTGAAAAAGCATTAGATATGGAGA
GAATGAGACAATATGAAATTCGCAAAAAACTAGACGAACTATACAAAATT
GAACTTGTCAACAAAGTCCGTTCAGAAAGAGGAGGTAAAAGTAAAGAAGA
ACTTTATGCATTACTGTCACCCCGGAGTGGTGGTACAAGGAAGAAAAGTC
GGAGAAGTGTCAAAAGTGCAGCCATCACTTCAAGCGAAAGAGAAATGACA
AAACTACCTGAAATCAATTTTGATGAGCGAACTCGGTTATTAAAATATGA
AACAACATCGGTGGATAGTGGTAGTGACAGTGCTTCTAGATATACTGCAC
CTCGCCCTCCCAAACAACCTTCTGCTGGTAGAAGTGTCAGTGCACACACC
TATGGTAGCAAGGCTCCACACCCACCGCCAccaaagtcaaagaaaaagaa
gaaaaggaaaattcatagggGATTGATGTTAGCAAAGAGTGAACAAATGG
TAGCACATCGTGTACAGGTTCAATCTATGGCTGAAGTTACCATGAAATTC
TTAGGTTCCAATTTACAATTAGCAAGCGATATGTTTCCCGCCAACAAATT
ATCAGAGATTCAAGTTATTCAACAGCATTGTGGAGCAAGCACCGTTTGTG
TTTTTCGTGAAATGATCCCACCAAATAcTGTATTCACTTTTGTATCTCGC
CGTCACCGTGGTTCACCGTTCGGCCTCACCATCAACATAGACGGtatcaa
aaacattcgaatcagtTCGTGTTGCGAATACAAACATAAACCTGGTTATC
GATTGGGTGGTAAAAACAGTCAGTTCGGTTTAAtctcagttcaaggtgct
gcaCCATGTTATAGATGTCAAGTCAGACTGAACCTACTGGATAAGAATAA
CAATGAAGCCGAAAAAgagGCGTCAAGTGACGAAGAAGCGGCTACAAGAA
GTTTCGACATCATCGTTAGTCGTGGTGGGAAGCGTCAGGAAGCCGTCAGA
GAAAGACCTAttTCAGCGAATGTTACAACTCAAACAGAGGCATCTTTATT
ACTCCCAAACTCGCAAGAAGATGACGAGTcaccaaaagaaaaagatgcCG
TGGCACTAACAGAACAATATCAAGACGACTTCGACGATGACTTTGAAGCC
GACGAAAACGACAGTAAAAACGGCGACGATGATTTAAACGAAAACGTATC
ATCTTCTTCCGAATCGGATTCGTCGGATAATGAATCCGATAAAGATTCCG
ATACAGAAAGCTCAGATACGGAAAGTGattcagaaaaatataaatccGAG
AACTCTGGAGAAAAACAGATGGAcaacagcttaactgaaacgGATGATAC
GATCACTTCAACCAATCAGCAACGAGATGAAGAAGACGAGCATCAACCAA
GTGACGTTGACGCTCGTTCCGACGCTGATTCTGATACCGACGTCGCTAAA
AAGTCCGACACTTACGACGATCATGATGATCATGATGACGATAAAGAACA
TGTCAATGTAGAACAAGAAGACTCTAAGAAACGAGACAGCGATTCAGAGT
CGGATAAAGAAAGCGTCAAGTCGGATGGTGACGGACGTCGTTCATCGGTA
TCGTCGGAAAGTGATTCAAGTGATGATAACGAGAAAGATAAAAACTTGAA
GGACAACGAAGAAGAAGTCGAAGAGGGAAAGGATGATGTGAAAGACAACG
AAGAACAACATAACGCTAAATTAGCTGATGATTTGATAGAGAAAATTGAA
CACATGAATATAGAAGATGAACCCGAACATCAACCCAAAGAGGAGAAGCA
AGACCACAATGATGATGAAGAATCTAACCAATTAgaaggaaaagaagaag
aagatgtgGAAAATGAAGATGGTGCTGGTGAATATGAAGAAGAGATGGCG
CCAAGTATCCCGTCAGTTGTCAGTAGAGAAAGCACCATGCTAACAGGTAA
CGAAGACGGACGTTTTGAgagtgaaaacaaaacaattcaattCAACGAAG
AAGTCGATGTAGTGCATTATGAGAAAGTTGAAGTTGAATCATCAGCCAAT
GACGGTCACGGAGATTCGTCAGATGACGGAAGTGACGCCGACGATGACGA
TGATTTTGACAGCGCGTTAAACAATGGACGTGAGCGTGTCATCCTGGCAG
ATCTTGGATTGGATGATGACGATCTTGAAGTGGAAAGTGACGATATCATT
ATTGATAGTGACGGTGATATCAAAGAAGTGCCTAAAAATAAAGAAGTTGA
TTCAGTATAGAAAGATATGAAGCTTGCAGAAGACTGTACGTTGCGAAAGG
ATTCAGTTAAAAGGACTTTTATTATAAAAGTGTAAACTGAGTAATTGATA
ACAATTAATTTTAACACACTATTAACCCACTTAAaattacagtcaactct
ctctaattcgaacttccgTTGCtcgaatatttctaaaattcgaagaaaat
tttccactttttgaTTGACAATGGTATCCTTAGTTTTTCGAATGAACACT
CCGTTAGATTCGTATCCTTCTCTAGTTCGAACTCCTTtacccttgaaaat
cgaattagagagtctACTGTATAATATAGAGATAactaaattattttatt
ataaaaagCTAAATCATTATATATCGGTATGTCGTGGTATGATAATTTGA
AGAGGTTTTTCATGCTTTGTAAACTTACGTAACTTCTGCCATTATGggag
caaacgttcgatttgcgtaaggtATCGCCtttacagattcgaacgtttgc
ttccataatggtggaagttacgtaattaaaaaaaaattgaaaacctcTAT
ACAGATTGTAAATAAATGAATTAAAATGCGATatcattattttgttttgt
taattgttatAAAACTTGTAATTCACTATTATCGTGTATTTTACCTGATT
TTAAATCCTTTTTTAATTTAACGTATTATACTATACATAATATAAAGATT
TTTAACAACATAGTAAGAATATATATTATTATCGATCATGATTTAACATT
TAAACACAAAgtacttttttttcatcttgGTATATACAGTGTGTCCGGGA
AAGAGTGGATATTCAACTCTTCCTAATCAAGAGAATTTACATTGGTATGC
AAGAGTGTCGAGGGTCCGGATGTATCCTTTTGTATACGGAAGTACCCAAA
ATAGCCCGGGAGTTTgcaactaaagtctattcacgataagtgtgcactct
ttttttttatagcacttttctaca
Run BLAST on NCBI

transcript from alignment at scaffold_161:91439..104108-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049597 ID=TCONS_00049597|Name=TCONS_00049597|organism=Clytia hemisphaerica|type=transcript|length=12670bp|location=Sequence derived from alignment at scaffold_161:91439..104108- (Clytia hemisphaerica)
TCAAAGGCCTCCAAGGTTTTCTAACCTAATAACAGAAATGAGGAGTTTTC TTAACACAACACTCTGAAGTTCTAAAGATCACTGAAAGCTAACATTTGAG GAAAATGGTCATGCTTTTACGAAAAATTTTCAATTAACTTTTTGACTTGT GCCAAAAGCATGAAAATCATAACCAGCTGAAATAGCACTTCATGAAAAAT GTGTTTTATAGATAGGAATTAAAATTCTTTCCCATAATGGTTTGGAACTG GAACTGACTGGAAAGCTTTTTTCAAATTTGAGGCAAAAGATAAAATGGAT GTTTGTTATTGTTGTAAAACTCAAATTGCTTGGTCTTAATTTTTAAAAAC TTTGTAAGTATTCTGATGGTTGGTATCCATTTTCTTATAGCTTCAATTTT CCCAATGTTACTTTAGTATGTCTACTATATTGAAAACCCTATTATTTAGA AAGATACATTTAGTTACAAATTCTTCAAAATATCAAAAACATACACATGA CCTTTAAAGATGGCAAGCTACACAGCAGGGTAAGTGATATATCAGTTTTT TTTTGAATTATTGTCAAATCCCTGTCATTTGAAATGTGAAATGACTAATA TCATCTCAGGCTGAAGTTCACTTCAGTCTTTAATAAAGCAAACACTGTTT CTGTACACAAGTTCATGTGAAAAGGGAGAGTTAAAGTTACTTCAGGGTGA CTTCACCCTAAGGCCATTTTTATGTACGGCTTGTAGGGCAGGCACAAGAG TTTTTCCTTTAGAAAAAATCATTAACCTCAAATCTCAAAAGTGACTTTCT GGTGAAAAATAATTCTTCACTAAAATATTTTTCTCTAAAGATAACTTTTT TGATATATGCGCATCCTGAAAAAAATCATAGAATTTTTATGAAATTTCAT TGAAAATCATCCAGGCTGCATGTAAAAAAACCCCGAAGAATTTTCGAAAT GAGTTAATTTCACCTGATTTTACCCTTATATAATTTTTCCCAGGCTAAAG TAAACTCTATCAGATATCTCAATAATCACATCAATCATTATTTTACTTTA GACAATTTGCCAATTACAACAGTTTAACAGACAAAAATCTCAGTGGATAC TTTGCAAACACACAGATGAGAAAACATTTAGTCAGATCTGGTCTGGTATG TATTTCAATACTTTTATTTACTTAATCATCCTTTCATTTTAACTCATTGG TATTAGTGGAAATGAAATCATACCTGGATATTTTCGAGATTTGATGTTTA CAATCGAAGAACAGTTTGTTCTATCATTAAAAAAATGACTCCATTGTCTA CCTTTTTCTACATGGCCAAAGTCCTTCATATCCAGGGTAATATTTCTAAG TCCTCATCTAAATGGATATAGTTTTCTTTATTGAATATTTATAATTTTGT TCAATCTTTTATTTTTCACTTCTAGATAACAAAGAATGGAAAAATAACAA GTGAAAATTCATACAGATTGAAAATTGCTAAACGAGAGCATAGAGAACAT GTCAAAGATCTTTTGGCAACAGCCATTGTTGAAAAAGCATTAGATATGGA GGTATAACCAGAAAGTATTATGGCTTAATCAGACTAGCATAATTTTGGGT CATGCTTCTTAGGTGGCCAAGACACAAGACATATATGATTAATTTCTCTT TTTCATTTTTTTGCCAAATCCTCAGATTTAGGCTGATTGACATTTGCATT CTTATAGAGAGAGAGCAGACCGGACCTTTAACAGTATTGTCTTTTTTGAA AGTTCCTGAAAATCTTTCAAGATTTCCCAAAAAGAAACACCTTGAGAATT CCTGCTTTTTTAATAATTGATGGTAAAACAAGAACTCAAAATAAAATTTC GGAAGGTAGTAAGTTTCTAAGTGCACTTGAGGGCAACCAGAATACCTCCT TTCCCTAGCTTTTCAAGGCTATGGTAGGGCGCCAGTCCTTCCCAAAGATT TTTACACTTACCCTTGATACTTTGATTGCTGAGCATCAAACAGAGTGGCA TCAAGTACCATGTTATAAGTCTCTGGCACCATCTGGCTGGAGATTGAACC CGTAACCATGCACACTATAGTTGAATGTTCTATCTTTATGCCACAGATTG CCTGAAATGGATGGTTGATTCTTATTTAGTTTTTATTGTTTATTTTACTC TTTCCAGAGAATGAGACAATATGAAATTCGCAAAAAACTAGACGAACTAT ACAAAATTGAACTTGTCAACAAAGTCCGTTCAGAAAGAGGAGGTAAAAGT AAAGAAGAACTTTATGCATTACTGTCACCCCGGAGTGGTGGTACAAGGAA GAAAAGTCGGAGAAGTGTCAAAAGTGCAGCCATCACTTCAAGCGAAAGAG AAATGACAAAACTACCTGAAATCAATTTTGATGAGCGAACTCGGTTATTA AAATATGAAGTAAGTGATTGCATTTCTTAAAAGTGTTTTTCAGATTTCCA TTTTTTATTTTGATGTAATTGAAACCAGCAGCTTTTTAAATAATGACAAG ATAATAGCATAGTGGCGTAGCGGTATAGTGGTTATCATCCTTGACTCCCT CCTGGGAGGCCCAATTTCGATACCCACCGTGTCTCTACGATTCACTTGGC AAGTGAATATACCTTCGCCCGGGTCAACCCATGCCATGTGAGGGGAATTG GGTACCATTACTCTGATACAAGAGTGTGGGTAGATTAGACAGACATTGTG ACGTGTTGTGGCACTCAGAAGGTTCAGCCTCGCATGAGCATTGCTCTCCC AGTGTCATTCAAGTGTCATGGTATACGCCATGGCTTGGCAGCTCGTCTGT CAAGTCGCAGTGTCTGTCAGCGCCGTGATTCCTACTCCTTTGTGGGTAGG ACCCATCCTGAATGCATTCGGAGAGCTCATATCTATCTATCATATCTATC TAATAGCATGTCGTATAAAATTTTATTAATGATCATAATGAAATTTGTTT CCTTTCTAGACAACATCGGTGGATAGTGGTAGTGACAGTGCTTCTAGATA TACTGCACCTCGCCCTCCCAAACAACCTTCTGCTGGTAGAAGTGTCAGTG CACACACCTATGGTAGCAAGGCTCCACACCCACCGCCACCAAAGTCAAAG AAAAAGAAGAAAAGGAAAATTCATAGGGTAAATTGAATTGAATTGTCTGT TTTATTTCACTTTGCAGAACTTAAGTAAGGGGAGACACTAAGCCTAAGAC TCCACTTCAGTNATGTTTTATTTCACTTTGCAGAACTTAGGTTAGAGGAG ACCCTAACCCTAAGACTCCACTTCAGTTAGATGTGCCTAAGAGGTAGGGA GGGACCCCCTTTTATACCTGGATTATTATTTGCAACTTTTACAGTCTTGA GTACTAAATGATACCTAAGTTATTGCTTTCAACCGTCTACAGTTCTGTAT CCAGTATTCAAGTCTTTTTTCAAAAAGGAAGTTGATTGGAATTAATTTTG TTATTTTCAGGGATTGATGTTAGCAAAGAGTGAACAAATGGTAGCACATC GTGTACAGGTATGCATCCATTGTTTTGAGTGAATTTTGTTTTATCTCACT CAGATTGCTTACCTTTCTTTCCTTCTTTCTATTCAATTTAATGGAGGGAT TTTTAGAAAAAAAATTGTATAAAGTGTGATGAGGAGGGAGGTATATCTGG ATGTCTGGATATCATTTTTGTGGATATCCAGGGGGAAAAGGTCAAAAGCT CTTGAATATCCAGGGCAGCTCAGTTGGTAGAGCTTTCGCATTGCAATTCA AAGTTCGAGGGTTCGATCCCTGACCGTCGCCAACTGTGAATGGTCTGATT GGGTAATCTGATCTAAGCTCTAGTTTAGACTGCCCACTTTTCGCCCTGCC TTTCTTAATTGTGAATTAAGGTGATCATAAAGTGGGCTGTCTAAAGTCAA TGCTTTGCCCTCTTTTGACGTCAATGCAATGTCTTCTTTCAACCTTTTTA AAGCAAAGAATTTAACTGCCCACTCTGTGCCCGCTTTGTGCCTATTCTTA CTATTAGAATAGGCAGGGCGAAAAGTGGGCCGTCTAAACTAGAGCTAAGT TATGATTCTCTTGCAACTGAGCTCTAGCTTAAACGACCGACTCTCTACCC TACTCCAATCGATTGGGGGCATAAAGTTGTAAGTTGTAAAACTTTGTTTG AAAAAGATTGAAAAAACATTGTATTGACATCAAAAAGCAATACATTGACT TTAGACAGCCAGCTTTATGTCCACTTAAGTTCACAGTTAAAATAATCAAA TCACAAATCTATCTATCTCGTTTCTAACTCACTTTCAGGTTCAATCTATG GCTGAAGTTACCATGAAATTCTTAGGTTCCAATTTACAATTAGCAAGCGA TATGTTTCCCGCCAACAAATTATCAGAGATTCAAGTTATTCAACAGCATT GTGGAGCAAGCACCGTTTGTGTTTTTCGTGAAATGATCCCACCAAATAGT AAGGACATTCATTTTTTTTTCTTCACTGAAGAAATTCTTCTAGAATAAAT ACGTAAAAAGTTCCAATTTTCCTAAATCAAAAGTTATAGGCGTTTTTGTG GGGAAGTTCCCCATTTTACCGCATTTTTTTATCATTTGATCCAAAAAAGT CGAGACTTAGAAGTTTATTTTAGTTTGAAAATGTGGTATATAGTTCGTGA ATTCTTAGTCCTTGTAATTTTGCCAGGAATCACAAAAAATCACATTATAA GGAAAAACTACGGGCTTTTGAGCTTGGTAACATAAAATTGACCAAATTAA AATCATCTTTTTGCTGATACTAATTTCATTTCTTTTTAGCTGTATTCACT TTTGTATCTCGCCGTCACCGTGGTTCACCGTTCGGCCTCACCATCAACAT AGACGGTATCAAAAACATTCGAATCAGTTCGTGTTGCGAATACAAACATA AACCTGGTTATCGATTGGGTGGTAAAAACAGTCAGTTCGGTTTAATCTCA GTTCAAGGTGCTGCACCATGTTATAGGTAAGAAATCATGTCTAAAGTTGT CTTTGACGCTAATGTTACAAACTGTTCATGATTGGTCTTTCCATATCTTG TATAATCATATATGCATGAGACGCCGTTCAAACAATTTATGAAGTTTCAA AATCCAATTTTGCCATCTTTAAAAGGGTCAAGGGTGTTTTAGTGTTACGA TTCATTTTTTTCTAACTTAGATAATCAGCATTCAATTTCAAGTTATTTTT GGTTTTCACCCTTCCATACAGTATGTATACAACAAAAGAGTTCTTAAAAT CTTAAAATCAGAAGACTCATTGCAAATGTCTCGGTTATTCAACATTCTTT ATCTTCATGTTCGTACCANCTAAAATCAGAAGAGTCATTGCAAATGTCTC GGTTATTCAACATTCTTTATCTTCATGATAAAACTTGCAGTTTGCTTAAG AATAATTTGCTTCTTATCTTATTCTTAGATGTCAAGTCAGACTGAACCTA CTGGATAAGAATAACAATGAAGCCGAAAAAGAGGTTTGTTTGTTTGTTAG TTCTTTCTTTATCATCAGTTTATAATAACTCATAACTTCATTCATTCATT TAGTCATCTTTTTATTCGTTCTTAAATTCATTCACTCGTTCATGAATTTA TTCACTCTTTCTTGATTTTACTTAATTCACTCATTCTTAAGTCAGTTCAC TTGTTCTTAAATCCATTTCGTAATTCTCCTTTTCCCTCTTAGGCTCTTTG CGCATTCTTAGTTGGTTCAGCGAATGTGGAATGCATAAAATGAAAATTTA AAAGTTAGGTCCAAACAAGAATTTATTTCATTCGTTTGATGCTTCTCTCT TCTTAGGCGTCAAGTGACGAAGAAGCGGCTACAAGAAGTTTCGACATCAT CGTTAGTCGTGGTGGGAAGCGTCAGGAAGCCGTCAGAGAAAGACCTAGTA AGAAATTGCCACTCTTTCCTTTTCTTATTTATAACGTCATTGAGTGGCCT GTCTGAAAAATAAAAACCTTGTAAATTGAAGTTTCAGCAAATATTTCACG TTATGTATTTAGTACCCCGAATAGTAGTTAATCTATATGTCTAGTATGCT GTCAAGAGTCAAGAGTGCTAATTTAGGACCCATTCATTTCTAAAAAGGCT TCTACATAGCTTTTCTTTGCAAAATATTGAGTGGGCATGACAACCCTGAC CCCTCGTAGACGAAGTAATTGAGTCGTAAGATGCTCAATCAAAATTGGAG AATTTTGAGCAAAATAATCTCATTTAAGCGCTATTAAATTTAGACAACCG ACACTTTTGGTATGAGTTTGAGCAAGCGTGTGTCAAGATTAAGTTATTAT GTACCGTTATTTTTTTCTTTCATAGTTTCAGCGAATGTTACAACTCAAAC AGAGGCATCTTTATTACTCCCAAACTCGCAAGAAGATGACGAGTCACCAA AAGAAAAAGATGCCGTGGCACTAACAGAACAATATCAAGACGACTTCGAC GATGACTTTGAAGCCGACGAAAACGACAGTAAAAACGGCGACGATGATTT AAACGAAAACGTATCATCTTCTTCCGAATCGGATTCGTCGGATAATGAAT CCGATAAAGATTCCGATACAGAAAGCTCAGATACGGAAAGTGATTCAGAA AAATATAAATCCGAGGTAAAGCTTTTTTTTGTCCTTCAAATTTATTTATT AAGTTCATTATCTTTAGACTTGTATTTGAGACGTGACTTGACTATAAACC TTTTCATAAATTACTTTAAGTACAACGGCTGCCTCGTTTTGAAACCATTG CCAAGGTGATCAAATCCCTCTAGTCTTCAAGTGTTACTTTAAAAGTGTTA CTTTAATAAATAGAGTGCACTTCTTATGAACTCCTTTGGGAATCAGTTAC AATAGCAATATTTTGAAAACGAGGTAAGCGTTGCTCGAGACGTAATTTAT GACTTCTATCCTGCTGTACAGTCTTCCAGGTTTTGCTGAGTTACATAAAT TCTGCTTTTTCGGCTATTCCAAGAAATTGTCCACCATGATTGCAGTCTAA GCCCGAGCCGTATCTAAGGGTGCTATCAAATAGTGCACGGGTCGTGGCGC TCCTAAGTATGACCTAACGTACCCTTTCCTCAGAATTGGCCGTTTTATGG AAGAGCAATTGGATTTTTTAGTAAAATTGTTTATGAAAAACTTGATCTGT TGTAAATGCTTCCAAAAGATATTGTAAATAGCTCAAAACAATATTTTTAG ACTGTCCTTCAAACTAAAGACTGGTCCCCTCTGCTGGAAGGTCATATACA AACTCAAATTCAAACTTTTGAGAATAGAATTAACATAAAAGTTAACTTTA TTGTCTTTCTTTACTCTAGAACTCTGGAGAAAAACAGATGGACAACAGCT TAACTGAAACGGATGATACGATCACTTCAACCAATCAGCAACGAGATGAA GAAGACGAGCATCAACCAAGTGACGTTGACGCTCGTTCCGACGCTGATTC TGATACCGACGTCGCTAAAAAGTCCGACACTTACGACGATCATGATGATC ATGATGACGATAAAGAACATGTCAATGTAGAACAAGAAGACTCTAAGAAA CGAGACAGCGATTCAGAGTCGGATAAAGAAAGCGTCAAGTCGGATGGTGA CGGACGTCGTTCATCGGTATCGTCGGAAAGTGATTCAAGTGATGATAACG AGAAAGATAAAAACTTGAAGGACAACGAAGAAGAAGTCGAAGGTGATTAT TTCAAATTTTGAACTTTTAAACGGGGAGAATATGATGGTATTAGGTGACT TATATGAAATTTTGACGAGTGTTTAAAAGGTATACAGCCCCTGTTATAAT AACCATTAAATTCTTATTGGGGCTTCTTATCTTATAGTCTAGCAAGCTAG ACAACTAATTCAGACATAAAGCAAAAAGTAATGGAGGGAACAATTTTATA CAAGCTAAATCCCGTAACAATAATCGTATTATCATATAACGCCTATACTA CTGTATTACATGCATTTTAAACGACTCCAGTCTACTTATCTTTGGGCGAA AATTAGGTTAATTCAGGCTTTTATATTTTTACTACTTTACCCTTTAAATT TCTCATATTTCTTAATAACTGATTCCAAATTTAGGTTTGTTCTTAAATTG TTCTACTTATTTTTGGTATTTTTTAACCTTATTCTTATTGTTCTCAAGAA ATTGTTCTATAAGAAAAAGGATTTAATATACTAATTTTGATATTGATTTT GTAGAGGGAAAGGATGATGTGAAAGACAACGAAGAACAACATAACGCTAA ATTAGCTGATGATTTGATAGAGAAAATTGAACACATGAATATAGAAGATG AACCCGAACATCAACCCAAAGAGGTATAACCACTGATCTCTAGCTACTTG ACTGGATCGGACTTTCCATTTAAAAGAAAGCGTGTACAGCTTTAGAGCTT ACTAGTCCGCCATTTTGTTTTCAACTCTGGTCGTTAACAGCGCGATTCGA ATGTTTTGAATTTCAAACGTTCGAAAATCTGAGATAGAAAACAACATAGA GGACCAACGGACTTACAAACTGGACACACTTCAACGGAAAATCTGTGACC TGTTAGTCTCTAGTGTGTAAAGGAATATGATATCTGTGAGCATTACGGAA ATAATATATGGGCCATCCATATAGTACGTACGCAGTGAAGGGGGGAGAGG GGGGTTTAGCAAAAGCGTACATCTATTGTTTAAATGACATCATTTCTATT ATTCTCTGCGTACAAGGGGGAGGGGGTATCAAATTTTTGGAAAATCTTTG CGTACGTACTATATGGACAAGCTAGAATTCAGAAATATTTAGCTGACCTT TAAACGTAAGTAAGCAAAGTATTTTCATCTGGTGGCTGTATACGGCTGGC TCCCAGTAACTTACCACATAGATCAGATTGCCCAATCTAAGCCATTGAGA TGGCAGTGAACGGGGACTTAAAGATTGACGCTCTATAATTTGATTATCAA GAATAATCAAAATCATCGAATAAGATAAAAAGCGCTGATTTACCGTCGTT CTCAGTCAGTCAGGATGTAAACAATTTAGGAGCATACCGTCTCCGTCGTT TAAAAATACAGATACATAAACTCGGTAATAACAAGGTAATGATAACTGTC TTCCCAGCTGGCACACAATGTCGTTTCAACGTTTTTCTAATATTCACAAC GTCCATATAGCGTTAGATGAACATCGAAACAACGTTGTTTGTCTGCTGTC TTTAACACTATTGTTGTAATTGACCAATCAGGAGAAGCAAGACCACAATG ATGATGAAGAATCTAACCAATTAGAAGGAAAAGAAGAAGAAGATGTGGAA AATGAAGATGGTGCTGGTGAATATGAAGAAGAGATGGCGCCAAGTATCCC GTCAGTTGTCAGTAGAGAAAGCACCATGGTGAGAATAAAAGGGCTTTTCC AGAAAAAACCGTGCAGCCCCTGTTGAGGAGGTCCAACCTTTTGAGACCTA CCCCCTTGGAATTCCAGGCAATTTTAGGATCATACTCCTCTGGAATTCCG AATTTTTACAAATTTTCAATCATTATCCCCTTGGAATTCTGCTTATTTTT GACGGATTTTCGTCTACCCTTATGGAATTCCACTGCATTTCAAACCTTAC CCCCTCGGAACGAAAATGGACCTCCTCAACAGGGGGTGCACAATTTTTTT CTGGAAAAGCCCAATGAAAGTTTTTTTAAATTTGCAATTTTGTATTTTAT TACTTCGATTAATGAATGATAGACCCTTCCTCATGTTTACATACAGTTAA CACTCCCTGATTCGATTTCCATCAAATAAGGGAGCGTACCGAATAGCAGA GCGTCGTTTATGAGAGTTTCTTGTTAACGATGAATTTCAGTAATATCGAA TAATGGCGGAGGGTATTGAATAGCAGAACGTTATTAGAGAGTGTCATCAG CACCTCAAAAGAAATCATGTTATGATTATGTTGCCTTAAAGGCTTTGCTT TGACATAAGTGTTCCCGTTTCATATCAGACACATATTTCATATCGTGACA ATGTGTGTGTTATGCTGATATAAGCAAAAAATGTTTTTCTTTTCCTCTTT CTGACCAATCTTGCTCCACATCCGTGTCAATCCAATGCGAAAAAAAATTG GGAATTAAAATTGATGAGTAAGCAAACGATATCACTCTTATTTAAAAACA AAACCCTTAAAATCACTGTTGGGTTTTTAATTCGTTCGTTCGTACATTCG TTTGGTCATACTTTCATCCATCCATCCATTCATTTGTTCGTCCATTCATT CGTTCGTCTATTCATTCATATATCTCTTCATTTTTCTAGCTAACAGGTAA CGAAGACGGACGTTTTGAGAGTGAAAACAAAACAATTCAATTCAACGAAG AAGTCGATGTAGTGGTACGAAGTTTTCTCGTATTTTTTACTGTTACTTAC TTTCTCCCTTCACNTCTTCATTTTTCTAGCTAACAGGTAACGAAGACGGA CGTTTTGAGAGTGAAAACAAAACAATTCAATTCAACGAAGAAGTCGATGT AGTGGTACGAAGTTTTCTCGTATTTTTTACTGTTACTTACCTTCTCCATT CACTCCTTTCAAAGCTTTTCAAAAGCCCTCTGGTAACCTAGGTCACAGAG TTTGTGTATGTTTTGTGGGATGATTATAATCGATGTTCAAAGTTCCGTCT CAGCCGGATTTACTTAAGTATAAAAAGAAGTATAAAAAGAAATAAAACTT TTACTTTTTACCGTACTAAAAATCCAGCAAAATTTGAAGAACCTTGGCTT ATTTTCATATGGTGAAAGAAAACTTTACTTCAGCCACTGTCTAATTAATC CTATAAAACCTTTCCCCATTCTTCCAGCATTATGAGAAAGTTGAAGTTGA ATCATCAGCCAATGACGGTCACGGAGATTCGTCAGATGACGGAAGTGACG CCGACGATGACGATGATTTTGACAGCGCGTTAAACAATGGACGTGAGCGT GTCATCCTGGCAGATCTTGGATTGGATGATGACGATCTTGAAGTGGAAAG TGACGATATCATTATTGATAGTGACGGTGATATCAAAGAAGTGCCTAAAA ATAAAGAAGGTACTCTTATCATTGAGTAAATTGTGGAGTAGGGTGATTAA TTTTACTAATCTACTGTCAAGTAGTGTTAAGTGAAAGTCTTGCTTTAGTT ATGATTAGGTTTGAGAATTAAGTGAGGCTTAAAGACTCTTTCAGAGACAA TGGCTTTGAAGTCAAGATATTAAAGAAAGAACATTGATTTACAGCTTCAA AGTCACAAGAGTAGCTCTTTCAATTTGATAATATTTAACAGCCAAAATGT ACTGGTTCTTATTTTAAAAAGTGTGCATCGGAGTTATAAGCAGTCAATAC AGAGGGTGCAAAGGTGGTGTATTGTGGATGTGGGCGTGGTTTATTATTCA AATAGGCTTGGTTTGTTAGGAATGCGGTTTGGTTTGAATTTGACAACCAC TTTTTAAAAGACTTCTAAAGATGAAATATAGTTTAAAAGTAAGGGTATGA TCTGAGGGGTTTTCTCAGCAAGCACTTTCCGAACAGGGACACATTTTCGG ATTTTTAAGACCACCCCCTTGTTTTGTTTATCAATGTCCCTCTCTCCAAG CTTCTGTGCATTTTCTCCTCTTTTTTTTCAGTTGATTCAGTATAGAAAGA TATGAAGCTTGCAGAAGACTGTACGTTGCGAAAGGATTCAGTTAAAAGGA CTTTTATTATAAAAGTGTAAACTGAGTAATTGATAACAATTAATTTTAAC ACACTATTAACCCACTTAAAATTACAGTCAACTCTCTCTAATTCGAACTT CCGTTGCTCGAATATTTCTAAAATTCGAAGAAAATTTTCCACTTTTTGAT TGACAATGGTATCCTTAGTTTTTCGAATGAACACTCCGTTAGATTCGTAT CCTTCTCTAGTTCGAACTCCTTTACCCTTGAAAATCGAATTAGAGAGTCT ACTGTATAATATAGAGATAACTAAATTATTTTATTATAAAAAGCTAAATC ATTATATATCGGTATGTCGTGGTATGATAATTTGAAGAGGTTTTTCAAGT TTTGTTAAGTTACGCAATTTCCGCCATNTGTGGTATGATAATTTAAAGAG GTTTTTCATGCTTTGTAAACTTACGTAACTTCTGCCATTATGGGAGCAAA CGTTCGATTTGCGTAAGGTATCGCCTTTACAGATTCGAACGTTTGCTTCC ATAATGGTGGAAGTTACGTAATTAAAAAAAAATTGAAAACCTCTATACAG ATTGTAAATAAATGAATTAAAATGCGATATCATTATTTTGTTTTGTTAAT TGTTATAAAACTTGTAATTCACTATTATCGTGTATTTTACCTGATTTTAA ATCCTTTTTTAATTTAACGTATTATACTATACATAATATAAAGATTTTTA ACAACATAGTAAGAATATATATTATTATCGATCATGATTTAACATTTAAA CACAAAGTACTTTTTTTTCATCTTGGTATATACAGTGTGTCCGGGAAAGA GTGGATATTCAACTCTTCCTAATCAAGAGAATTTACATTGGTATGCAAGA GTGTCGAGGGTCCGGATGTATCCTTTTGTATACGGAAGTACCCAAAATAG CCCGGGAGTTTGCAACTAAAGTCTATTCACGATAAGTGTGCACTCTTTTT TTTTATAGCACTTTTCTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031446XLOC_031446Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049597-exon-scaffold_161-1575043694:103580..104108TCONS_00049597-exon-scaffold_161-1575043694:103580..104108Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:102964..103057TCONS_00049597-exon-scaffold_161-1575043694:102964..103057Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:102558..102683TCONS_00049597-exon-scaffold_161-1575043694:102558..102683Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:101700..101951TCONS_00049597-exon-scaffold_161-1575043694:101700..101951Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:100982..101149TCONS_00049597-exon-scaffold_161-1575043694:100982..101149Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:100601..100648TCONS_00049597-exon-scaffold_161-1575043694:100601..100648Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:99661..99820TCONS_00049597-exon-scaffold_161-1575043694:99661..99820Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:99133..99319TCONS_00049597-exon-scaffold_161-1575043694:99133..99319Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:98626..98680TCONS_00049597-exon-scaffold_161-1575043694:98626..98680Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:98212..98302TCONS_00049597-exon-scaffold_161-1575043694:98212..98302Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:97494..97783TCONS_00049597-exon-scaffold_161-1575043694:97494..97783Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:96417..96789TCONS_00049597-exon-scaffold_161-1575043694:96417..96789Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:95786..95904TCONS_00049597-exon-scaffold_161-1575043694:95786..95904Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:94731..94877TCONS_00049597-exon-scaffold_161-1575043694:94731..94877Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:93605..93679TCONS_00049597-exon-scaffold_161-1575043694:93605..93679Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:93050..93281TCONS_00049597-exon-scaffold_161-1575043694:93050..93281Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:92070..92477TCONS_00049597-exon-scaffold_161-1575043694:92070..92477Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1575043694:91439..92008TCONS_00049597-exon-scaffold_161-1575043694:91439..92008Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:103580..104108TCONS_00049597-exon-scaffold_161-1510915933:103580..104108Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:102964..103057TCONS_00049597-exon-scaffold_161-1510915933:102964..103057Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:102558..102683TCONS_00049597-exon-scaffold_161-1510915933:102558..102683Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:101700..101951TCONS_00049597-exon-scaffold_161-1510915933:101700..101951Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:100982..101149TCONS_00049597-exon-scaffold_161-1510915933:100982..101149Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:100601..100648TCONS_00049597-exon-scaffold_161-1510915933:100601..100648Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:99661..99820TCONS_00049597-exon-scaffold_161-1510915933:99661..99820Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:99133..99319TCONS_00049597-exon-scaffold_161-1510915933:99133..99319Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:98626..98680TCONS_00049597-exon-scaffold_161-1510915933:98626..98680Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:98212..98302TCONS_00049597-exon-scaffold_161-1510915933:98212..98302Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:97494..97783TCONS_00049597-exon-scaffold_161-1510915933:97494..97783Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:96417..96789TCONS_00049597-exon-scaffold_161-1510915933:96417..96789Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:95786..95904TCONS_00049597-exon-scaffold_161-1510915933:95786..95904Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:94731..94877TCONS_00049597-exon-scaffold_161-1510915933:94731..94877Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:93605..93679TCONS_00049597-exon-scaffold_161-1510915933:93605..93679Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:93050..93281TCONS_00049597-exon-scaffold_161-1510915933:93050..93281Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:92070..92477TCONS_00049597-exon-scaffold_161-1510915933:92070..92477Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1510915933:91439..92008TCONS_00049597-exon-scaffold_161-1510915933:91439..92008Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:103580..104108TCONS_00049597-exon-scaffold_161-1491911889:103580..104108Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:102964..103057TCONS_00049597-exon-scaffold_161-1491911889:102964..103057Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:102558..102683TCONS_00049597-exon-scaffold_161-1491911889:102558..102683Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:101700..101951TCONS_00049597-exon-scaffold_161-1491911889:101700..101951Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:100982..101149TCONS_00049597-exon-scaffold_161-1491911889:100982..101149Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:100601..100648TCONS_00049597-exon-scaffold_161-1491911889:100601..100648Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:99661..99820TCONS_00049597-exon-scaffold_161-1491911889:99661..99820Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:99133..99319TCONS_00049597-exon-scaffold_161-1491911889:99133..99319Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:98626..98680TCONS_00049597-exon-scaffold_161-1491911889:98626..98680Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:98212..98302TCONS_00049597-exon-scaffold_161-1491911889:98212..98302Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:97494..97783TCONS_00049597-exon-scaffold_161-1491911889:97494..97783Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:96417..96789TCONS_00049597-exon-scaffold_161-1491911889:96417..96789Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:95786..95904TCONS_00049597-exon-scaffold_161-1491911889:95786..95904Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:94731..94877TCONS_00049597-exon-scaffold_161-1491911889:94731..94877Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:93605..93679TCONS_00049597-exon-scaffold_161-1491911889:93605..93679Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:93050..93281TCONS_00049597-exon-scaffold_161-1491911889:93050..93281Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:92070..92477TCONS_00049597-exon-scaffold_161-1491911889:92070..92477Clytia hemisphaericaexon
TCONS_00049597-exon-scaffold_161-1491911889:91439..92008TCONS_00049597-exon-scaffold_161-1491911889:91439..92008Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_161supercontigscaffold_161:91439..104108 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.462313 0.38526 0.74054 0.679228 3.1559 1.75403 1.25989 1.81709 0.850193 0.45155 0.824382 0.737428 1.29511 1.0241 0.424151 0.63962 0.224314 0.70089 1.047 0.927958 0.975113 1.2182 1.28569 0.995072 20.8707 14.3099 1.25133 1.09125 1.15339 1.22331
Blast
BLAST of TCONS_00049597 vs. Swiss-Prot (Human)
Match: ERIC3 (Glutamate-rich protein 3 OS=Homo sapiens GN=ERICH3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.813e-31
Identity = 54/125 (43.20%), Postives = 81/125 (64.80%), Query Frame = 3
Query: 1206 HRVQVQSMAEVTMKFLGSNLQLASDMFPANKLSEIQVIQQHCGASTVCVFREMIPPNTVFTFVSRRHRGSPFGLTINIDGIKNIRISSCCEYKHKPGYRLGGKNSQFGLISVQGAAPCYRCQVRL 1580
            H+  + S A +TM +LG N+ L+SD    +   EI+V QQHCG   +CV++  +     F F+S+RH G PF LT  ++G++  R+SSCCEYKH+ G RLGGK   FG + V+ ++PCY+C + +
Sbjct:  279 HKTSLHSNAAITMIYLGKNVHLSSDN--PDFRDEIKVYQQHCGGENLCVYKGKLLEKETFQFISKRHHGFPFSLTFFLNGMQVNRLSSCCEYKHRKGSRLGGKRGYFGFVCVERSSPCYKCIIAM 401          

HSP 2 Score: 122.094 bits (305), Expect = 1.163e-27
Identity = 58/119 (48.74%), Postives = 85/119 (71.43%), Query Frame = 3
Query:  516 SYTAGQFANYNSLTDKNLSGYFANTQMRKHLVRSGLITKNGKITSENSYRLKIAKREHREHVKDLLATAIVEKALDMERMRQYEIRKKLDELYKIELVNKVRSERGGKSKEELYALLSP 872
            S+ AG  A YNSL DK+L+GYF NT++R+HL+RSGLIT++G+I SE  Y+L + KR+H++++++ LA AI  K LDMER  Q EI+KKL+ L + E + + + E   +S E    +LSP
Sbjct:    4 SHPAGLLAAYNSLMDKHLAGYFNNTRIRRHLLRSGLITRSGRILSEKEYKLNMMKRDHQKYIRECLAQAIFHKVLDMERYHQLEIKKKLETLARKERIQRFKGEHTRRSVENNMPILSP 122          
The following BLAST results are available for this feature:
BLAST of TCONS_00049597 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERIC38.813e-3143.20Glutamate-rich protein 3 OS=Homo sapiens GN=ERICH3... [more]
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