TCONS_00049551 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049551
Unique NameTCONS_00049551
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1535

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049551 ID=TCONS_00049551|Name=TCONS_00049551|organism=Clytia hemisphaerica|type=transcript|length=1535bp
GTCGACGAGCCTAACGAGAACAATGATGAAATCGACGAAACTGATAGCGG
TTATCAATCGCTGAAGCCATTTTCTCGGCGATCGCTATCCTACGATAATA
TTCACGACTTTGTGACGGAACAAGACAAGAAAACCGACAAAATGTCACCG
ACTAAACACGACTATGACATGAATACGCCTGAACTAGAAATTGGAAATTC
CGACAAACTACAGGACAAAAACTCGTTACcaaatatacaaaataaaaagt
cggGATTACCGAAAAACGACAATTTCACTGAACCGAGAAACGCTTTTTCA
GACGATGAAGATTTAACTCGAGTCATTGACGACTGCTCACCGAGAAATTA
CGAGCGTCGAGTTTTCGAATACCTTAAAGAAGATGTAGATGCACTTAGCA
CTGTTAATCATCCAATTAGCCGACATTTATCGTACGATGTTAACATGCCT
GGGAACTATAATACTATACATTCAGGCTCAATGAGTAGTCATCAATTGAA
AACGTTGAAACACATGGTTTCTCTTTTCAAACCAAAAATCGGTGGAAACC
CTTTGGAAGCTCAAGAGGAGCACGGTTTTAGAGAATCGGTACGCGAGGGT
CGTCATTCTGTGCAATTCTACATGAACCAATTATGTCGTCACTTGGATCC
ACAACTGCGTACCAAGAGTCCATCAAAGAAACTCTTGAAAGGGTTGATAT
CAATCGAAAGTTTGTTGACGTCACTCGAAGTTGATCTTCGTTCAAATCCA
AATGCAACGTGGTTACGAGAATTTATTGATGAACCGAATTGTGGACATGT
TGTTTTGTTACGTTTCTTGAAATATCTCCAAGATCATTCATCTCCTGTTG
CCATGGCAAATAGTCTGGAACGAGCTAACAACTATAAGAATAAGAAAACT
GATGCTTTATTGTCCCGAGAGCCGaaCGACGAACATCTATGTCTTCTTTG
CTTGAAAGCTATCGTAAGAAATAAGtatGGTTTTCATAAAGTATTAAGTG
CACCACGTAGCCTAGCAACGATGACTTATTGCTTGAGGCTATCTaatgtc
aaaacaaaaatcgCAGTCCTGAGGATTCTTTCCGAAGCATGTGATCACGG
TGGGGGATTCGATAAAGCTTTACAAGCATTCGAAGATTACAagcaaatca
aaaaagaaagatatcgCTTCGAAAGTTTGGTTCATTCTGTTATATTGAAA
GGAAAACAAAGCACTCCAACTTATCAGGAAGTTGTTGTACATTTCTTTAA
CGCACTATTGAGTAATGCACCCTCATTGAATCAACGTGTTTTTCATCAAC
AAGAATTAGAACAAGCTGGATTCACTGCTGAGAGAGTCGAACAGACGCTG
GAGGGATTGAGCTCAGAAGGTATTTATGACGAGCTAAGCAAATGGAGGAA
TAACTATATTGATGTCTCAACAACACTTGATGAATTCGTATCTATGAAAT
CCCGATCCACCATGCTTCGAGATGAGGTTGATTTGCTGCAAGGAAAAGTC
GAGCAATTCCAAAGGGAAAGAAACACATTACAAGC
Run BLAST on NCBI

transcript from alignment at scaffold_160:225101..234002-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049551 ID=TCONS_00049551|Name=TCONS_00049551|organism=Clytia hemisphaerica|type=transcript|length=8902bp|location=Sequence derived from alignment at scaffold_160:225101..234002- (Clytia hemisphaerica)
GTCGACGAGCCTAACGAGAACAATGATGAAATCGACGAAACTGATAGCGG
TTATCAATCGCTGAAGCCATTTTCTCGGCGATCGCTATCCTACGATAATA
TTCACGACTTTGTGACGGAACAAGACAAGAAAACCGACAAAATGTCACCG
ACTAAACACGACTATGACATGAATACGCCTGAACTAGAAATTGGAAATTC
CGACAAACTACAGGACAAAAACTCGTTACCAAATATACAAAATAAAAAGT
CGGGATTACCGAAAAACGACAATTTCACTGAACCGAGAAACGCTTTTTCA
GACGATGAAGATTTAACTCGAGTCATTGACGACTGCTCACCGAGAAATTA
CGAGCGTCGAGTTTTCGAATACCTTAAAGAAGATGTAGATGCACTTAGCA
CTGTTAATCATCCAATTAGCCGACATTTATCGTACGATGTTAACATGCCT
GGGAACTATAATACTATACATTCAGGCTCAATGAGTAGTCATCAATTGAA
AACGTTGAAACACATGGTTTCTCTTTTCAAACCAAAAATCGGTGGAAACC
CTTTGGAAGCTCAAGAGGAGCACGGTTTTAGAGTAAGAAACTCCATTTGA
AATTCTCCATTTACCTCAATTCAACACCCTTTTACGCCCTTTTCACGCCT
TAGTAGGTATTTCTGCAACCGCACTCAGTCAGAGGCTACTGAAAGGTTTC
TTTTTTGATAGCTATTTTCCGGGGTGCCATTTTTTTCTCCCTGGATTGTT
CCACTTAACCTAGATCCTTCTCTTCAATTGCTGTGCATCAAGCAGAGATA
TATCAAGCGCCATTTTGTACCAGGGGGCACTCGATTCAAAAAAGCAACCA
TACCTGCGGCCCAAAATGAGGTCTTTGAAATCAGCCTTATACAGTGCCCT
TTGGGAAGCTTGAAAAAGGGTCTAGCCTTGAGTGCCCCTTGGGTTTTGTA
CTAAGTACGAAGTTTTTGGTATGACCAAAGATAATATTTTGGGTTGAATT
CTTTCTAATTCCTTTACCGGATAACCAATCTTTTAAATCACCTTTTCGTT
CTCAAATCGGAAATAAGAAACACATAAAAATGTCAAAAACATGTGATAAA
ATACATTGTTCTGTTCAAATTTTGTATCAGTATTGTGGTGCAATATTATT
TTCAGAACTTTGACAACCAAGTGTAAGATTTAAACGAGGCTCTCGTCTAA
CAAGAGTATACAGCAGAGGTTCCGTTTAAGTCTCTCCGTCCTGGAGAGCA
TTATAGGATTTTTTACAAAAGTGAAACATAAAACACTTTGAAAGAAAGTG
CATTTTATGGTGAAAATACTGAAAAAGATTTGCAACATATTGAGAATAAT
TTGATAATAATTTTCTGATTGTTGATATTTTTTGGTATCTGATTTGACAT
AGCATAGTGGTCATAGATAACTTCATTGAAAAAGCAAGTTTCTTTTATGA
AGTATTTATTTTTAGAATATCTTTATTTGGAAATGTGAATTGCATTTTAT
CAATTCGATTTCTTGTATAAAGGGACCAAGTGAAGTCAATAATACACCCC
TGTCTCACAGCCCCGGTGAAACTCTTCCCGCTGTGAGGATATAAATTTCT
ATCTAAATCCCAACGGGGATAGAAATTCTATTGTTGCCAGGTTCAAAAAT
TCTAATGGGAGTGGTTTTGTAGTTAATTCTTTCTCGAATTTCGAATAGGG
ATGAAATCAAACTCAATTTCCCAGTGGGCCTGAAATTGTAGGGTATTTTT
CCTACAGGAGACGAAATTTTTGCCAAATTGTAATGATATTGTAAAACACA
AGTATTGACATGAGCATCAATGACAAAGTTAATTTCATGAAATTAACTTT
GTCATTGACATGAGCATCAATGACAAAGTTAATTTCATGAAATTAACTTT
GTCATTGACATGAGCATCAATGACAAAGTTAATTTCATGAAATTAACTTT
GTCATTGACATGAGCATCAATGACAAAGTTAATTTCATGAAATTAACTTT
GTCATTGACATGAGCATCAATGACAAAGTTAATTTCATGAAACCTTAGAG
TAAAAGCTGGCTCTAAGTGCTAGCCTGGAGGCCACTTAGGCTTTTTTACG
TAAAGTTACTATTTAAATGAAGTAGTTTAAGTCTAAACAAACAGAAGGGA
CAAAAGCCGTCTCCCTTCCGTCTCCCTTATTTATCTTAAGTAGAGAGGTT
GGAAAGCCTTGGGAGAAAACGTATGCTAAAAATTATATAGCAGTGTTTCT
ATTCTATTAAGAAAAATATAAGTTAAGTTTCAGTATAAGGGTAAGTGACC
CTGCGGCAAAAACTTTCCTGAAGGAAAAAAATCCTAGATAACTACAAAAA
CTTCCAATAACCTTATTTTCTTTTACTTTTAACCAATAGGAATCGGTACG
CGAGGGTCGTCATTCTGTGCAATTCTACATGAACCAATTATGTCGTCACT
TGGATCCACAACTGCGTACCAAGAGTCCATCAAAGAAACTCTTGAAAGGG
TTGATATCAATCGAAAGTTTGTTGACGTCACTCGAAGTTGATCTTCGTTC
AAATCCAAATGCAACGTAAGCATAAAAAAATTCAAAATTTTCTTAAAAGT
ACTTCAACCAAATCATTTTTCGCGTGATTTACTTTTTATGTACTCGAAGC
CCTTCTATATAGCTATATAGTTATTTTTTCCTTGAAGTTTGGAATCCTCT
AAAGGTAGCTCGTCGAAAACCCATGTTTTTGTTGGGTTTTTACTCCAACG
GGGAACCTGTTAAAGCTTATAATTTTCTATGCAATAATTCTAAAGTGCAA
AATATTTGTATATTTCAAATCAGGAGGTTTCAAAGTCAGGGGTTTTGCTT
TTTTTGGTAGGCTGGCGAATGAAAAATTAACTCTGGTGGTTTCTAGATTC
TAGCAAGCGCAGTGTATTGATTAGCGTAAATATGTACTTGAGGCGGCAAA
CCAAACTTTTTGAATGGCGAATCTTAATTTTTTTCATGCCTTGGTCCGGC
GAAATTCATCGTTCGTCGGATCTAAATAAGACCCCATCAAAGTGGAGGTA
CTTCGAAGCCTTCCGATTTCGGATATAGAATTTTTTTCTCACTTAGAAGT
ATCGCATAAAAACTATGAAATAATATAACTAGCGACTTCTCATTTTTAGG
TGGTTACGAGAATTTATTGATGAACCGAATTGTGGACATGTTGTTTTGTT
ACGTTTCTTGAAATATCTCCAAGATCATTCATCTCCTGTTGCCATGGCAA
ATAGTCTGGAACGAGCTAACAACTATAAGAATAAGAAAACTGATGCTTTA
TTGTCCCGAGAGCCGGTGAGTCGCAAGAATGCTTACGCTTCATACAACGT
TGTTTGGACGTCATTGACGCTATATAGTTGTCATGACCGTTATAATTGAC
GTCGTGAACGTTATACAGACGCCACAAACGTTGTATAGACATTGTTAGCG
TTATATAGACGTCGTGAACGTTATACAGACGCCACAAACGTTATATAGAT
GTCATGAACGTTGTATAGACATTGTGAGCGTTATATAGATGTCGTGAACG
TTATACAGACGCCACAAATGTTACATAGACATCATGAACGTTTTATAGAC
GTCGTCATATAAAATGGACGGCATAAACGTTATAATGCAATTGAAACAAT
AACATGTTCAGCTTTTTATACCGCAACGAATTCGGAAGCATTAGAGCCTA
TCATTAGAATTTTTTGATTCTTCAATTTAAACAAAGATTTCTGAAACAGA
ACGTTGAAAGAACGTTGAAACAACACGACTGTCAGTTTTTAGCAAATGTT
GCCTAGCACACGATGTTGTTTCAACGGCCATCTAACGTTCATAACATCCA
TATAACGTTAGATGAACGTTATAACAACGCTGTGAGTCAGCTGGGTTTGC
TCATTTGGAAAGTGATATAAAACACCCTTTATTCGAATATTTGTTAATTC
GATAACTGTTGGTCCCTTGAAGATCGAATTAGAGAGGATCAAATGTATTT
GAATCAATATACAACTACTCCTTTTATTTTTCAGAACGACGAACATCTAT
GTCTTCTTTGCTTGAAAGCTATCGTAAGAAATAAGGTACGATTTACTTCA
AACCTAATTAACACCCCCTAATACCCGCTCCAGGGGGAGCCCTTCGACTA
TGACCGTTGATTGAAATTAGATTTGTGAGAGTTTTATTTGTCCACAGTTT
CCTACACTGATAGCGAACACTCTTCATGATAGATAGCTATGGAGACATTC
ACTGGTCGTGTATGTCCTATTATAACCATTTTGTGAAGGATGTTAGGGAA
AACCACTCTCTATTTTAAGACTTCACCTTAAAGGAAAAAACAAAGTCGGG
TAAAACTTAGTCGTTGGTAAAACTTTTCACCGTAGAAAATTCGTCACTTT
TGTGAAAATCTTTGTCGTAGTCCTCTTGAAGTTATAGTCTGAAGACTTCG
TGAAGACGTATTTCGTCGGGGAAAACTTAGCCACTTGCCTACAAAACTGT
ATCACTTCGTCGCAAGTTTTCGCCTTAGAAGAACAGGTTTAATAAAGTTT
AAATATAAATTTTTTCAATTTTTCAGTATGGTTTTCATAAAGTATTAAGT
GCACCACGTAGCCTAGCAACGATGACTTATTGCTTGAGGCTATCTAATGT
CAAAACAAAAATCGCAGTCCTGAGGGTAGGTATCTCATTTCTTCTTATTT
CTTTAAATCAACTTGATCAGGAAAAACATAGCCCTTCAAGTAGGAGCCCC
CCCCTCCCTCAGATGAGTCTCTGATCACACCATCACCTAAAAGAATATAA
TCTGATATTCTGATGGCGGATTATGGCGTACTGTCGTATTGGCAGATTAA
CATCCAACCACGCTAAAGCTCTAATGGAGCGGACCCGAAAATCCCCAAAA
ACGAGAGCTGGGGTCCTCCAGCCTCACACTGTGGAATCCTTGACCAGATT
CCGTAATCTCCGGGGTGACTATAAAAAAAGTAAAATCTCTACAACTCACT
TGGATGAGAGCTTTTAATTATATTCGATTTTTTTACCGGGTTATCCACTG
TCGCGGGGATCTTACCGGGTCACTGGTACAGGAGCCTCTTGTATAGAAGT
TTAGCCAATCAAAGGGTATCTTATGATACCACGTTGTTTATTCTAACAAT
CAAATTCGTGATATAGTACCAGGGAATCTGTTTTAACCANAAGTTTTCGC
CTTAGAAGAACAAGTTTAATAAAGTTTAAATATAAATTTTTTCAATTTTT
CAGTATGGTTTTCATAAAGTATTAAGTGCACCACGTAGCCTAGCAACGAT
GACTTATTGCTTGAGGCTATCTAATGTCAAAACAAAAATCGCAGTCCTGA
GGGTAGGTATCTCATTTCTTCTTATTTCTTTAAATCAACTTGATCAGGAA
AAACATAGCCCTTCAAGTAGGACCCCCCCCTCCCTCAGATGAGTCTCTGA
TCACACCATCACCTAAAAGAATATAATCTGATATTCTGATGGCGGATTAT
GGCGTATTGTCGTATTGGCGGATTGACATCCAACCACGCTAAAGCTCTAA
TGGAGCGGACCCGAAAATCCCCCAAAACGAGAACTGGGGTCCTCCAGCCT
CACACTGTAGAATCCTTGACCAGATTCCGTAATCTCCGGGGTGACTATAA
AAAAAGTAAAATCTCTACAACTCACTTGGACGAGAGCTTCTAATTATATT
CGATTTTTTTCACCGGGTTATCCACTGTCGCGGGGATCTGACCGGGTCAC
TGGTACAGGAGCCTCTTGTATAGAAGTTTAGCCAATCAAAGCGTATCTTA
TGATACCACGTTGTTTATTCTAACGAATCAAATTCGTGATATAATACCAG
GGAATCTGTTTTAACCAATCCAAATGTATCTTTATCCAGATTCTTTCCGA
AGCATGTGATCACGGTGGGGGATTCGATAAAGCTTTACAAGCATTCGAAG
ATTACAAGCAAATCAAAAAAGAAAGATATCGCTTCGAAAGTTTGGTTCAT
TCTGTTATATTGAAAGGAAAACAAAGCACTCCAACTTATCAGGCTAGTTT
TTCTTATATTTTGTAATCCATCCTACATCTACTGCAAGCTTCTTCAACAG
TATATACGCTTTTTATAAGAACTTTTTGTAGCATTCGGGTTTTCTTAAAC
ATTTGAATTTTAAGCCTAAAAATATTTTTATTTTCTCTTTTTTGTCAGTA
ACTTTGTCCTAAAGCTGGAAATGTTTACGAGAAGTGTGCCTTTATAAGAA
TAAATATTCAATTTGCTGAAGAAAACTTCTATTTTGCTATATAATTTGTA
TATTTTAAAGAGTATCAAAATTTCTTTATTATGACTGTTTGTCTTGGGGG
TCACTCATATATCGATTTTCTCCACGATTAACGTCAAAATGACGCTAAGG
CTAAGTCCAAGACCGTTAGTTGGGGGTTAGTCGTGGGAAACATCGATATG
TGAGCTACCCCTTGGGTATCTTTGTTTGCAAATAGTCAAACGAACGTGGC
CCATTTTTCGACCTCACTTTTTTCATGGTTTTACATCATAGGAAGTTGTT
GTACATTTCTTTAACGCACTATTGAGTAATGCACCCTCATTGAATCAACG
TGTTTTTCATCAACAAGAATTAGAACAAGCTGGATTCACTGCTGAGAGAG
TCGAACAGGTAGCTACATGTTCTTAATATTCATGATGAAATTAGTCAAAA
AAATCAAAAATATGCTAAGAATATCACCATCATAGACATAAGAATACCAT
ATTTAGAGCACTTTTAAATTTAAATTACCAACTATCCCTAGAAAGACTTT
CCCAATGACATCATGTTTTGCCTCAAGTGGGTATTATACATGTAAAATTT
TAATTTTGATTCTAACCTAAGAATACTGTAAGTGTGGATTATTTCTTTCC
AAAAAGTTAAGAATACCTATGATAAAATAAAAACAAGAAGCCCAGAGGGC
ATGAAGGCCCAGCGAATAAAAATATGAACTGAACAAGACTTGAGTAGCAG
AGGGGATTTGAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTGTTTGAAAACGCGTATCG
CCTAGTAAATTGTTACACACTGACACCGGGCAGAATGCTAATGAAAGGCC
CAGTACGCTAAAGCTAGCTGGGCCAAAAACATCATATAAAAAAAACGTGT
AGTCTATATATTCCTTCTGTTATCTCGGCTAAAATTTTGAAAAACATGTA
AACTCTACATTGCTTGTGCCTTCTTAACTTTATAGACGCTGGAGGGATTG
AGCTCAGAAGGTATTTATGACGAGCTAAGCAAATGGAGGAATAACTATAT
TGATGTCTCAACAACACTTGATGAATTCGTATCTATGAAATCCCGATCCA
CCATGCTTCGAGATGAGGTACGCCAATTTGTTGTCATAGAAACCAAAATA
ACGTTCCTCAATATTGTGCAAACTCGAGCCCAATCCCTTAGTTCGCTTCT
GATAGCACTTTATCAGTAAAATGAAGAAAGCGTTAAACAAGTAGTCCAGA
GTACTAAATTGGATATTGTTGGCTCTCAAAATGTAAGCGTAATTGGAATT
CTAGTTTTTACTATTTCAATTAAATTATCAACAATATTATATATTACTGA
TTTTGTTGATGGCTTATTTATCACTACCGTGGTTTTAAGCAAAAGTTTGT
TAAGCCACTCACTCAACATTTGCATACTTCAATATTTTATCAAGAATTTT
CTCTTTTTTGTTTTTTTTCCTAAGAATTTACCCAATTTTTATTTCTAGGT
TGATTTGCTGCAAGGAAAAGTCGAGGTAAATTTCCAATTTTAAACTATGT
GAATATCAACCAACCTGTACATAACCACAGAGAACGTCCATCTAGCATTC
ATAACGCGAGACTATATTAGATGTCGCAGATTTTTTTCTGTAGACATTAT
CTATTATTCCACTTTAAGTCTTTTTCCCAGGTTTTCGAATTTGCGTCAAA
ACATTTGAAAGCAAAATTTTGACGTGACGATACCGAAAGATATATAAATC
ACCTGCAAGGAACCCATGGGCGAAATTTGAAACCCTCGGGGGCGCGAGAA
CCCGCGGGAAACCCCGATAAACCTGCAGAAAGCGAGGGATCTCTGAAAAG
AGAAACATAAACCCGAGGAGAATCGAGGGAACCCCAAAGTATTCAAGGAA
AGTAGATCTAGTACTCTCGATGTATTTATAGAGTCTCTCTAGAGTCTATA
TTTTCTGCTGCCCTTGATTGGTATTCGTAATCATCTCGTCCGCATAAGAA
TGAAAAAATGAAAAAAGAAAAAAGAGATCGGGTTGGAAAGCGCTGCAATT
ATCTTATGACATTTTGTTTTCGTCATCTTCTTTGCAATCATCTTTAAATT
TCCACTTTCTTCTTCCACAGCAATTCCAAAGGGAAAGAAACACATTACAA
GC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031427XLOC_031427Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049551-exon-scaffold_160-1575043694:233421..234002TCONS_00049551-exon-scaffold_160-1575043694:233421..234002Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:231438..231613TCONS_00049551-exon-scaffold_160-1575043694:231438..231613Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:230688..230853TCONS_00049551-exon-scaffold_160-1575043694:230688..230853Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:229918..229968TCONS_00049551-exon-scaffold_160-1575043694:229918..229968Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:228651..228749TCONS_00049551-exon-scaffold_160-1575043694:228651..228749Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:227961..228113TCONS_00049551-exon-scaffold_160-1575043694:227961..228113Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:227345..227461TCONS_00049551-exon-scaffold_160-1575043694:227345..227461Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:226136..226267TCONS_00049551-exon-scaffold_160-1575043694:226136..226267Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:225728..225754TCONS_00049551-exon-scaffold_160-1575043694:225728..225754Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1575043694:225101..225132TCONS_00049551-exon-scaffold_160-1575043694:225101..225132Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:233421..234002TCONS_00049551-exon-scaffold_160-1510915933:233421..234002Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:231438..231613TCONS_00049551-exon-scaffold_160-1510915933:231438..231613Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:230688..230853TCONS_00049551-exon-scaffold_160-1510915933:230688..230853Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:229918..229968TCONS_00049551-exon-scaffold_160-1510915933:229918..229968Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:228651..228749TCONS_00049551-exon-scaffold_160-1510915933:228651..228749Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:227961..228113TCONS_00049551-exon-scaffold_160-1510915933:227961..228113Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:227345..227461TCONS_00049551-exon-scaffold_160-1510915933:227345..227461Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:226136..226267TCONS_00049551-exon-scaffold_160-1510915933:226136..226267Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:225728..225754TCONS_00049551-exon-scaffold_160-1510915933:225728..225754Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1510915933:225101..225132TCONS_00049551-exon-scaffold_160-1510915933:225101..225132Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:233421..234002TCONS_00049551-exon-scaffold_160-1491911889:233421..234002Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:231438..231613TCONS_00049551-exon-scaffold_160-1491911889:231438..231613Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:230688..230853TCONS_00049551-exon-scaffold_160-1491911889:230688..230853Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:229918..229968TCONS_00049551-exon-scaffold_160-1491911889:229918..229968Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:228651..228749TCONS_00049551-exon-scaffold_160-1491911889:228651..228749Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:227961..228113TCONS_00049551-exon-scaffold_160-1491911889:227961..228113Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:227345..227461TCONS_00049551-exon-scaffold_160-1491911889:227345..227461Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:226136..226267TCONS_00049551-exon-scaffold_160-1491911889:226136..226267Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:225728..225754TCONS_00049551-exon-scaffold_160-1491911889:225728..225754Clytia hemisphaericaexon
TCONS_00049551-exon-scaffold_160-1491911889:225101..225132TCONS_00049551-exon-scaffold_160-1491911889:225101..225132Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_160supercontigscaffold_160:225101..234002 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.494976	0.432455	0.166595	0.0444568	0.0498372	0.0787641	0.517801	0.32795	0.330062	0.713353	0.262812	0.397063	2.6104	2.2868	2.12101	1.84977	0.480874	1.90163	0.322051	0.999967	0.0356471	0	0.185172	0.068555	0	0	0	0	0	0.15128
Blast
[Close]
BLAST of TCONS_00049551 vs. Swiss-Prot (Human)
Match: FMNL2 (Formin-like protein 2 OS=Homo sapiens GN=FMNL2 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 4.819e-21
Identity = 79/315 (25.08%), Postives = 146/315 (46.35%), Query Frame = 1 
Query:  619 YMNQLCRHLDPQLRTKSPSKKLLKGXXXXXXXXXXXXVDLRSNPNATWLREFIDEPNCGHVVLLRFLKYLQ------------------DHSSPVA---------------MANSLERANNYKNKKTDALLSR----------EPNDEHLCLLCLKAIVRNKYGFHKVLSAPRSLATMTYCLRLSNVKTKIAVLRILSEACDHGGGFDKALQAFEDYKQIKKERYRFESLVHSVILKGKQSTPTYQEVVVHFFNALLSNAPSLNQRVFHQQELEQAGFTAERVEQTLEGLSSEGIYDELSKWRNNYIDVSTTLDE 1434
            Y+ +L  +LDP +      KK  + +     +L  LE+ LR+N +  W+REF++E N G  VL+ +L + Q                  D S P +               + NS+ R+  +   + + L SR          + +D H+C++CL+AI+  +YGF+ V+S P ++  +   L   N +TK  VL +L+  C   GG +  L AF+++K++  E+ RFE L+     + + +   +    + F N ++ +   +N RV  Q E  + G   +     L+   S+ +  ++  + +N  DV   L++
Sbjct:   79 YIQKLKGYLDPAV----TRKKFRRRVQESTQVLRELEISLRTN-HIGWVREFLNEENKGLDVLVEYLSFAQYAVTFDFESVESTVESSVDKSKPWSRSIEDLHRGSNLPSPVGNSVSRSGRHSALRYNTLPSRRTLKNSRLVSKKDDVHVCIMCLRAIMNYQYGFNMVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEH--FRNEDNNIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGL--DEYLDKLKHTESDKLQVQIQAYLDNVFDVGALLED 384
The following BLAST results are available for this feature:
BLAST of TCONS_00049551 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FMNL24.819e-2125.08Formin-like protein 2 OS=Homo sapiens GN=FMNL2 PE=... [more]
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