TCONS_00049532 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049532
Unique NameTCONS_00049532
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049532 ID=TCONS_00049532|Name=TCONS_00049532|organism=Clytia hemisphaerica|type=transcript|length=3178bp
GGAATTTTAAAAACACAAAGCAATACAAAACCAGAAATCGAAGACAAAAG
AAATcagtaaacaaaacaaacactATTAACAATACCATTGAATTCAAGTG
TAATTAAATATCCCACGCATATCGGACAACTTGGCAAATCAACCATATAA
ATACGAAGCCAGTttgatcaaaaacatcaaattacATGAAATCTTGCACG
AAACATATCATCAAAGACTCGACGCCAAGAATTTACTGATTAACAAGGAC
CATATCTGAATACAGAACGAAAGCTATTGGAGTGCATACagctttcaaaa
tgaaaattcgggGAACAATAAACACTCTTATTGTAGTTATCATCTTAACA
GgtATCATTCAACAAACTGATGCTGTTTGCCGAGAATACAATGGAAATGT
CTGCTCACGTCTCGGttcaagaaattttgatattccAGCCAGTATGACAG
ATGATGATATTGACTTAGAAATTAACAATTTGATAAGTGATGCTACCAAC
AAATATTCGGAATGTATAGCATTCTACAGACGAGCAGTATGTAGGATAAA
ATATGGAGAATGTCACCATAAAAATTATGATCCATCAAAACCACTTATAC
CTTTAAAGGCTTGCAGAGATGTCTGTGGGTGGGCTACAAAGGACTCTATA
TGCTATCATGGACTAAATCCAGACTCTAAACTAAAAAAATGGCTTAACAG
GCTTAACTGTAACAAATANGCAGAGATGTTTGTGAGTGGGCTACAAAGGA
CTCTATATGCTATCATGGACTAAATCCAGACTCTAAACTAAAAAAATGGC
TTAACAGGCTTAACTGTAACAAATATCCAAAAAGTTTTTGTGGTGATGGG
AAATTTTTAGAAAGGGATAACGAGAGGATAAAGTTCAATTCATGTATTAA
AAAGTACGATCCGAAGAACAGAAAAGATCCAGTTTCAGTAGGATTGACAC
CAAACCCAATCGTCGACAAAACGATTATGGAAAAAACATTACGAAAATAC
TTTCCAACGGAGATGTTGGATGATATCAAATGTAATATAATTACTAAAAG
AAGATCTATCAACAGTTTATATGATCTaaccaaatttaaatatcttcCAA
ACTTCAAACATGAAAGCCTAAATGAAAATGTCAAGCCGTCACTTTATTGT
ATATCACACAAAGGACATACAAAAATCACAATACTTTCAACAAAGGAGCC
TTTATATACACCAGATAGATATCTATCGCTTGAGAATGTCAACTATGGTA
TAATTACTGATACTAAAACAGAGGAATCAAATTTAGTAGCATTTGGTGAC
ACTTCAGCATGcagtaatgatttttttaagtaTAACATACGTACTGAAAA
GACAGGTACAACAGTTTTAAAAGCTACATCGCTCGCAGAAGACACTAAAt
ggaaatatattgaaaagttttttggtTTCTTAATGGTGTATACTGGACTT
TCTAGAGATGTATTATTCAGAAAATTTAATGTAGCTGGACTTCTTACACT
GCAAAATATGAAATGGACAACTACTTGGGATAATGGAGGTCATCGATTTG
ATATTCTTACCAGTGACCAGGGAAAAACACAAATGAGGTTGCCTACATTC
GGTGGCTCATTTGCTGAGATAAACCCGGAAGATCGAAATGTTACCATTCA
ATCACCTGAAATACTGCTTGGGTCACGTAAAAAATTATTCTCCATGTATT
TCTCCTTACAAGAATTTTCCATTGTCGACTTTTTAAGAACTCAATTATCA
CCAAATTTTGGAACACTTGCTGATTTAATGGAGAAGCGTGGAGAATTTGA
ATATTTAAAACTAGAAATGGCAGATTATTTCTTCACAACGCGCGGTGACT
TCAGCAACATTCTACCAACTAAAGAAGCATTTAaacttgagaaaaattct
atgaTCCTTAAAGTGAGGGAGAAACACGATGGTAATTACCTTGGTATTTG
TACAGGCAAAGTAAAAGTTGAtatgaaatcaaagaaaagacCCTCATGGT
TGGATAATATAAAGTTAGACTTGATCTCCAAAGTTCGAGCTGATGCCCcg
aaaaatcaagaatttgaaataaaattcaacCTTGACCAAGAAAATCCAGA
TTGTGAAAAAGAGACTGGCAAATGGAAATTCTTAAACGAGACAATCAATT
TCTTCAAAGAAAAGGCTCGATGCAATTGTATATCAAATTACACACTAGCT
GAAaggaaagttatgaaaaattcaaGTAAAGATAACCCTTGTAAAGTAAA
AGGAGACAGACTGGTTTccataaaaatttacaaattcaaAGATGGAGGAC
GTTTAAGTTTCAATGTTACAACAAGGAACCATGATTACGAAAAGATTCAC
ATATTTATGGATATCGATTCAAGTACAATACtctatttctttgaaaaaga
cAATAGTCAAGCCAAGGGCGAAGGTGATGATAAAATCAGCTCTGGGATTG
ATTCGGGGGTATCGGGAGAACCATCGTCAGGAGATCatgatggtgatggt
gatgaCAGTATCTCTGGTGATGGATGTGATGACAAATGTCCTAATGGTTC
TGAAACTGTTTAATCATTTGttccgtcaactgctctaacttgggacgatt
ggtcgaaacatgggactgttgcatatctggtctgtaatttcACTTACcgt
aaaatcgaaagtgaaatcgtgtatttttcaaTACGCCGCTCATTAACTCA
AATCTAATGACTTTGggggttcggtgaaatggtggccgaattgccgtccc
atgttttgtcagatagtcccaagttggagcagttgacggttaTACATTtc
tgggacgagatggagtttttacaagctcttatttgattttgttagtcgtt
aaccagtaataaaaaacttttgttccttttttttaaagaacgcgtcattt
tttttacttataaaaactccatctcatctgacaTTTCTAGTGTTATACAG
TGGAGTTTTTTAATTCGAACCACGATAACTCGAATGTAtccttaactcga
ataaattttatggtcccttcaatTAACAATGCCTTAAAAACCTTACTCCA
TTAATCGAAGAACAAATTTCGATTATTTGTGCGTGTTCGAGAATTGTACA
CTTCTTTTTTTTGCTGCTGtataacaaaatataaaaacagaGATATAAAA
AATAAGACACAGAGATATCCGTCGCAGC
Run BLAST on NCBI

protein sequence of TCONS_00049532-protein

>TCONS_00049532-protein ID=TCONS_00049532-protein|Name=TCONS_00049532-protein|organism=Clytia hemisphaerica|type=polypeptide|length=528bp
MEKTLRKYFPTEMLDDIKCNIITKRRSINSLYDLTKFKYLPNFKHESLNE
NVKPSLYCISHKGHTKITILSTKEPLYTPDRYLSLENVNYGIITDTKTEE
SNLVAFGDTSACSNDFFKYNIRTEKTGTTVLKATSLAEDTKWKYIEKFFG
FLMVYTGLSRDVLFRKFNVAGLLTLQNMKWTTTWDNGGHRFDILTSDQGK
TQMRLPTFGGSFAEINPEDRNVTIQSPEILLGSRKKLFSMYFSLQEFSIV
DFLRTQLSPNFGTLADLMEKRGEFEYLKLEMADYFFTTRGDFSNILPTKE
AFKLEKNSMILKVREKHDGNYLGICTGKVKVDMKSKKRPSWLDNIKLDLI
SKVRADAPKNQEFEIKFNLDQENPDCEKETGKWKFLNETINFFKEKARCN
CISNYTLAERKVMKNSSKDNPCKVKGDRLVSIKIYKFKDGGRLSFNVTTR
NHDYEKIHIFMDIDSSTILYFFEKDNSQAKGEGDDKISSGIDSGVSGEPS
SGDHDGDGDDSISGDGCDDKCPNGSETV
Run BLAST on NCBI

transcript from alignment at scaffold_160:320530..328764+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049532 ID=TCONS_00049532|Name=TCONS_00049532|organism=Clytia hemisphaerica|type=transcript|length=8235bp|location=Sequence derived from alignment at scaffold_160:320530..328764+ (Clytia hemisphaerica)
GGAATTTTAAAAACACAAAGCAATACAAAACCAGAAATCGAAGACAAAAG
AAATcagtaaacaaaacaaacactATTAACAATACCATTGAATTCAAGTG
TAATTAAATATCCCACGCATATCGGACAACTTGGCAAATCAACCATATAA
ATACGAAGCCAGTttgatcaaaaacatcaaattacATGAAATCTTGCACG
AAACATATCATCAAAGACTCGACGCCAAGAATTTACTGATTAACAAGGAC
CATATCTGAATACAGAACGAAAGGTAATCattctttttcataaaaatatt
cttCCTCAATTGCCGACTTCTAAGTAACTAAGTTtgtgaccgcagtcgga
ggcgacacGAAggttcctctttcgatagctaactacccgaaggtagggaa
gGGCACCACCCTTTTTCCCTGGATtgttccacttacccttgatccttctc
ttaaatgttgagcatcaagcagagaggcatcaagtaccattttgttttgg
aaaCCTTTGTtttgacccggctgggggttgaacccacaatcttgcgcacc
gtagccgaatgctctaccactgcactacggtcgcacTATGCCCACTCCTA
CCAGGTCACATAGAATAGGCTTTATTACATTTTATCCTAATTTGTCTCTC
GTCAGAATTTCTACTGAAAATGATATCACTTTTGAACGTAGTAAGAGATC
TTCCTTTCCTTAAAAATCAGCGAGGTTAAAAGGTCTGATCGTTAGAACAA
GTGATTATCGGCTACACgtttactttttaaaaaacatccagatactttga
aacttttggatgttcttaacttttttgagttttaagcctaaaaatgttct
taacatgttcttattttcaccattttgtgggtatttttgttCCTTTTCCT
TAAgcaaatcgggtgtttttgagtccgcaaagccttaaaaatgttcttaa
cttgtttttaacattttggtcatcgaagccttatgttcttataaagtttg
tttttataaaaaacgtgtaataaatGACTGAGCGGCCTCATTCAAGATCT
AAACCAGcttcctcaaaaatcaaaattaagaaGAAAGTCATTACCATTTA
CAGGTTATCAAATCAGCACAATTAAGTGTAAATTATGTAAATGCTTATGC
AAAGAACCcatcaatgataattttgaaTGGTGATAATTTTCCTTTAATAA
TTTCCAAACAAACCACTAAGTTCTCACTGGTTGCGAAGGCAACAAGCTAA
ACAAATGTAATTAGAAAGGCACTGATTGTAATGGGTTGTGAAGAAACTTA
AGGAAATTATAAAAGTCACACAATAAAACACTTGCtttggaatctttttt
ttacttatAATGCATCATTCATAACAAAACTACACCCACTTCTCATAGat
ccactgggaccccttcccactggaaagattggccaaaatatcgtccccag
tggaaaattatactgtaatttttatccccactgaaaataatcagataagc
aaatcctcatcgaaaatattgtgctatttttttcatCCCCTCTGGCattc
tggctcgaaaacaatggaattcgaatccacagccataaaaaacataagaa
tatcaatctccatcgaCTTTtgatccgttatttttacccccactggctaa
aaaaacctaccgggtctatgagaagggggtgtaaaacTGCAGTGTTTAAG
AAATATAATCTGAGAAATGCGCGCAACATTTTCAGATTCAGATTCCCCGG
AGAAGTTTCCGTTGTAGAATACAATAAAATTAATTCttcatttatcattt
ttttatgcAGATCAAAGAATATATATGATAAAAAGAGTTGTCCTCAAAGA
AACTAGGCCCTAGGCAGTTTTTAAATAATGGATAAAATCACATAGTGGCC
AGACCTTAAAATATTGTTCTTTTTCCTGTTTCACAACAGATTTATCATGA
CAGGAAAGGAGAGACCTTTTTGGCCTTTCATCTCCATCAATTACCAAATG
CTGTCAACAAGATGTTCTTACCTAGTATTTAACTGGCCAATTATCACAAA
AAAATTGCATTCGAATAAATAACTCATTAAGAAATTGTTTCATCATTAAG
AACGCTAATCACGCAGCTACTCAATTTGCTGAAATGTTTTCGTAAatcta
tttttgtaaattcatcaTTTTGAAGTGAAAGGCTTTTTATTGATTGCTTG
GTTTAAAAGATTTGGCGGCTTAATGCTGCAAACTGCAGTTTTCATTGCAT
AGCCTGTTTCAGACTCGGCTGAAGCGGGGAGAcaggggagacttcagcct
acCCAACTTTGAGCAAatgtgatttattttttcaaattccttGCGAGTTT
TATCTCATTTTAAGCCTTCAGCCTTCCCACTTTTACCGTGGTTCCACCGG
TCTTGTGTTTAATCCTTTAATACTGTATTCTTTTCAGCTATTGGAGTGCA
TACagctttcaaaatgaaaattcgggGAACAATAAACACTCTTATTGTAG
TTATCATCTTAACAGGTGCGTGCGtacatttcattattttcccacATTGG
ACTGTTCCatatttccatacagggggatgGACGAATCTTTTCGAGCCAAA
AAAAGAAATGTGTTGATACCCCTTGGGAATTTTAGAGTAACCTTgtaccc
cttggaaaaatgaaaaaatggtCCTTTATGCCCCCTGAAAATCTTTCTCC
GATTACCCCCtagaaatttttgtccatttttttctcttttcttatCTTGC
ATTTTATTGTAAATAGTCAGTCAAATCAGAGCAAAATCAATACAGCTGAC
TCTTGCTTATCCGAACTCGAAAAACGGAAAAATGTTatttattcgaatta
cagagagattcgaattgtagaaagtattttaagaggctTTCCCATTGACT
GGGAAttagttcgagttatagaaatagattcgaataataaaggTTCGGAT
AAACGAAAGTCTACTGTAGCTAAGCTTTCTAATTAGCGTTTTATGAGTTC
AAATAATTGAGTGTAATATTGAGACTGAATCGAAAGAGGAAGAAATAAAC
GAATGATTcggaaattaaaatgaaaacaaattccAAAGGCTTACTTAACA
CGTCCGCTCCAACAAAATGTAATTGTCCGGCAAGTGTCCACACTGATTTA
TTACATACGGACAATAATTTAGCGGATACATGAGAAAGACAATGCATGAA
TTAGATTATGTTGGCTTAATTTCTTTGTTACGCTGCAGCCAGTGTATGCT
GTAGTCAATATCGGCAAAAActataaaactttaaaaatatcatcttcatt
tttcaggtATCATTCAACAAACTGATGCTGTTTGCCGAGAATACAATGGA
AATGTCTGCTCACGTCTCGGttcaagaaattttgatattccAGCCAGTAT
GACAGATGATGATATTGACTTAGAAATTAACAATTTGATAAGTGATGCTA
CCAACAAATATTCGGAATGTATAGCATTCTACAGACGAGCAGTATGTAGG
ATAAAATATGGAGAATGTCACCATAAAAATTATGATCCATCAAAACCACT
TATACCTTTAAAGGCTTGCAGAGATGTCTGTGGGTGGGCTACAAAGGACT
CTATATGCTATCATGGACTAAATCCAGACTCTAAACTAAAAAAATGGCTT
AACAGGCTTAACTGTAACAAATANGCAGAGATGTTTGTGAGTGGGCTACA
AAGGACTCTATATGCTATCATGGACTAAATCCAGACTCTAAACTAAAAAA
ATGGCTTAACAGGCTTAACTGTAACAAATATCCAAAAAGTTTTTGTGGTG
ATGGGAAATTTTTAGGTAAGTACATTTTGATCATACAAAGATTCTaaggg
ggggtttgtaggggttcgaaataccgttttcccgtcaaatattttgctga
atcccggaatcccgaaaattgaaaaaataataacaccgtcacaccggctt
ttacagggcaaaaatgtacctaaataccgtcaccgtctgattttaaaata
ccgttttcccgtctattttttcgtcaaatcccgtaataccgtactaaaaa
agggccaatcccgtcacaccgtaaaagtacaaccctcCCCCCTTCTAAGG
GTGTGGTGAAGTAgtttaaacaaaaaaagatattaaaacgCTAGGTTTCT
CAAATATCCCTATTCTTCCCTACATAGCTATGAGGCTTTTTGGGGTGACT
TTCCAGCGGCTGACACTTACAGTGCATATTTGGGTTTAGACTATGACACA
TAACTATCTAAGAAAATGGCCCAAAGCCAAGAAAACTCGCAAACGTTTTT
TTTACTGAAAAGAGCTTACATCCGGCAGAGTTTGCCATTTTCTTCAAAAC
TCTCCCGCTGATTTTTTTACGGTTATAAACTCCGCGCGTGCATAGTTTTC
CAACTACCATccctgtaacggacgataaaaCCGTCTAGTTCGGTTCCTCT
TTTTCACGGCTCTTCTTATTTCTTTTTCTGTCCAGGATTGTGTACccaca
taaaaagtaaaatagatAACGCCGAAGAGTACCTAAAGCATAAATAAAGG
ATTCTAGTTCTTTGCTTGTTTACAGCTTTGTATTTCTAATATTCAATTTC
CTTCTATTTTAGAAAGGGATAACGAGAGGATAAAGTTCAATTCATGTATT
AAAAAGTACGATCCGAAGAACAGAAAAGGTAATGATTAAGATTCAATATC
AATCGCTCAAAAAAATGGACTCTACGTGAGACTcgttcttttgaaaattt
taccaaaatttgcgaaaaagtgacTGAATGGTACTTTTCTCAAAATTACC
CACTTTTTATCCGAACCCTAAGAgcgactgatttttctattttgttgttt
ttaccaCCCTACCTAGGACCCTtggaggtgaaaaaaggtaccctaaccAG
CTGCACATCCTGTACCCTTTTCAGCCCTTACTACTCGACCCCCTGGATCA
AATTCCCATTATTGCAACTCTGcgattctattgttttctttttgttatag
ATCCAGTTTCAGTAGGATTGACACCAAACCCAATCGTCGACAAAACGATT
ATGGAAAAAACATTACGAAAATACTTTCCAACGGAGATGTTGGATGATAT
CAAATGTAATATAATTACTAAAAGAAGATCTATCAACAGTTTATATGATC
TaaccaaatttaaatatcttcCAAACTTCAAACATGAAAGCCTAAATGAA
AATGTCAAGCCGTCACTTTATTGTATATCACACAAAGGACATACAAAAAT
CACAATACTTTCAACAAAGGAGCCTTTATATACACCAGATAGATATCTAT
CGCTTGAGAATGTCAACTATGGTATAATTACTGATACTAAAACAGAGGAA
TCAAATTTAGTAGCATTTGGTGACACTTCAGCATGcagtaatgatttttt
taagtaTAACATACGTACTGAAAAGACAGGTACAACAGTTTTAAAAGCTA
CATCGCTCGCAGAAGACACTAAAtggaaatatattgaaaagttttttggt
TTCTTAATGGTGTATACTGGACTTTCTAGAGATGTATTATTCAGAAAATT
TAATGTAGCTGGACTTCTTACACTGCAAAATATGAAATGGACAACTACTT
GGGATAATGGAGGTCATCGATTTGATATTCTTACCAGTGACCAGGGAAAA
ACACAAATGAGGTTGCCTACATTCGGTGGCTCATTTGCTGAGATAAACCC
GGAAGATCGAAATGTTACCATTCAATCACCTGAAATACTGCTTGGGTCAC
GTAAAAAATTATTCTCCATGTATTTCTCCTTACAAGAATTTTCCATTGTC
GACTTTTTAAGAACTCAATTATCACCAAATTTTGGAACACTTGCTGATTT
AATGGAGAAGCGTGGAGAATTTGAATATTTAAAACTAGAAATGGTAAGTT
TTTTTGATGATAATTCCATAATGATAagttacacccccttctcgcagacc
cggtaggattttcgGACTGAAATTCGATGGGATTGATTTTCCCATTCtat
ctcaatataatctgcagcggagacaaaaaatgCTGTAATTCTTTATTGAA
TTAGATTTAAATAACGGTTTGTGCTTGTCGAGAAGATATTCAAAAGTGGA
ATACTatcaaatagaaataaaataaagttttggCTACTTTTGAATGTATA
TCATATTGCATACCTGACTGTCTAAGGGTTGAAttcaattttgtgttttt
tggaGACATTATATTACTGCAAAAATTTCATGTGTAATGTAAATTAACCT
TATCTTTTTTTAGGCAGATTATTTCTTCACAACGCGCGGTGACTTCAGCA
ACATTCTACCAACTAAAGAAGCATTTAaacttgagaaaaattctatgaTC
CTTAAAGTGAGGGAGAAACACGATGGTAATTACCTTGGTATTTGTACAGG
CAAAGTAAAAGTTGAtatgaaatcaaagaaaagacCCTCATGGTTGGATA
ATATAAAGTTAGACTTGATCTCCAAAGTTCGAGCTGATGCCCcgaaaaat
caagaatttgaaataaaattcaacCTTGACCAAGAAAATCCAGATTGTGA
AAAAGAGGTATGTTATGTcctcaaatttgatgaaatttgtcCAAAACCAT
GTATTTAAAATGTTCATCTTTGTTAATCTAAAACTACTAAATGTAAAGTC
CAACTAGAAGCAGACTTTCTGATTTGGTGGTGGTATAGACTTTGTAAGGC
CTTGTGACCGGGTAGCTTGGTCGGTACTCTTGTCGCCCGAATAGACAGGA
GGGGGTCCGAAAaagcagggggtaggaaaatattctaaattctaataagc
ggtgGGATGAAATAAGCTTGTGGGCTCGATCCTCGGTCACCACCGCCAAC
TCGGCGAATAAGTAGCTTAGATTTGTGTAATCTGATCTGGGCtttgagag
taggtgtggctcTCTGCTTCAGCATTTGATCTCTTAGGTCTAGCACATAT
AAAAAAGCGGGTAAACTGTGAGGGCACTtgatttctcttttttattaaaa
cacccctgtgtcacagacccgctggaagCTTAACCTActtgaaaatttag
caaaaataaaaagttccaccgggatTGTTagacaaagttgtataaaataT
AAGGAAGTATTTTTGATAAGTCCaacttttttaaagtcattctcaattgt
tttttatctttcttttacAGACTGGCAAATGGAAATTCTTAAACGAGACA
ATCAATTTCTTCAAAGAAAAGGCTCGATGCAATTGTATATCAAATTACAC
ACTAGCTGAAaggaaagttatgaaaaattcaaGTAAAGATAACCCTTGTA
AAGTAAAAGGAGACAGACTGGTTTccataaaaatttacaaattcaaAGAT
GGAGGACGTTTAAGTTTCAATGTTACAACAAGGAACCATGATTACGAAAA
GATTCACATATTTATGGATATCGATTCAAGTACAATACtctatttctttg
aaaaagacAATAGTCAAGCCAAGGGCGAAGGTGATGATAAAATCAGCTCT
GGGATTGATTCGGGGGTATCGGGAGAACCATCGTCAGGAGATCatgatgg
tgatggtgatgaCAGTATCTCTGGTGATGGATGTGATGACAAATGTCCTA
ATGGTTCTGAAACTGTTTAATCATTTGttccgtcaactgctctaacttgg
gacgattggtcgaaacatgggactgttgcatatctggtctgtaatttcAC
TTACcgtaaaatcgaaagtgaaatcgtgtatttttcaaTACGCCGCTCAT
TAACTCAAATCTAATGACTTTGggggttcggtgaaatggtggccgaattg
ccgtcccatgttttgtcagatagtcccaagttggagcagttgacggttaT
ACATTtctgggacgagatggagtttttacaagctcttatttgattttgtt
agtcgttaaccagtaataaaaaacttttgttccttttttttaaagaacgc
gtcattttttttacttataaaaactccatctcatctgacaTTTCTAGTGT
TATACAGTGGAGTTTTTTAATTCGAACCACGATAACTCGAATGTAtcctt
aactcgaataaattttatggtcccttcaatTAACAATGCCTTAAAAACCT
TACTCCATTAATCGAAGAACAAATTTCGATTATTTGTGCGTGTTCGAGAA
TTGTACACTTCTTTTTTTTGCTGCTGtataacaaaatataaaaacagaGA
TATAAAAAATAAGACACAGAGATATCCGTCGCAGC

Coding sequence (CDS) from alignment at scaffold_160:320530..328764+

>TCONS_00049532 ID=TCONS_00049532|Name=TCONS_00049532|organism=Clytia hemisphaerica|type=CDS|length=4761bp|location=Sequence derived from alignment at scaffold_160:320530..328764+ (Clytia hemisphaerica)
ATGGAAAAAACATTACGAAAATACTTTCCAACGGAGATGTTGGATGATAT
CAAATGTAATATAATTACTAAAAGAAGATCTATCAACAGTTTATATGATC
TaaccaaatttaaatatcttcCAAACTTCAAACATGAAAGCCTAAATGAA
AATGTCAAGCCGTCACTTTATTGTATATCACACAAAGGACATACAAAAAT
CACAATACTTTCAACAAAGGAGCCTTTATATACACCAGATAGATATCTAT
CGCTTGAGAATGTCAACTATGGTATAATTACTGATACTAAAACAGAGGAA
TCAAATTTAGTAGCATTTGGTGACACTTCAGCATGcagtaatgatttttt
taagtaTAACATACGTACTGAAAAGACAGGTACAACAGTTTTAAAAGCTA
CATCGCTCGCAGAAGACACTAAAtggaaatatattgaaaagttttttggt
TTCTTAATGGTGTATACTGGACTTTCTAGAGATGTATTATTCAGAAAATT
TAATGTAGCTGGACTTCTTACACTGCAAAATATGAAATGGACAACTACTT
GGGATAATGGAGGTCATCGATTTGATATTCTTACCAGTGACCAGGGAAAA
ACACAAATGAGGTTGCCTACATTCGGTGGCTCATTTGCTGAGATAAACCC
GGAAGATCGAAATGTTACCATTCAATCACCTGAAATACTGCTTGGGTCAC
GTAAAAAATTATTCTCCATGTATTTCTCCTTACAAGAATTTTCCATTGTC
GACTTTTTAAGAACTCAATTATCACCAAATTTTGGAACACTTGCTGATTT
AATGGAGAAGCGTGGAGAATTTGAATATTTAAAACTAGAAATGGCAGATT
ATTTCTTCACAACGCGCGGTGACTTCAGCAACATTCTACCAACTAAAGAA
GCATTTAaacttgagaaaaattctatgaTCCTTAAAGTGAGGGAGAAACA
CGATGGTAATTACCTTGGTATTTGTACAGGCAAAGTAAAAGTTGAtatga
aatcaaagaaaagacCCTCATGGTTGGATAATATAAAGTTAGACTTGATC
TCCAAAGTTCGAGCTGATGCCCcgaaaaatcaagaatttgaaataaaatt
caacCTTGACCAAGAAAATCCAGATTGTGAAAAAGAGACTGGCAAATGGA
AATTCTTAAACGAGACAATCAATTTCTTCAAAGAAAAGGCTCGATGCAAT
TGTATATCAAATTACACACTAGCTGAAaggaaagttatgaaaaattcaaG
TAAAGATAACCCTTGTAAAGTAAAAGGAGACAGACTGGTTTccataaaaa
tttacaaattcaaAGATGGAGGACGTTTAAGTTTCAATGTTACAACAAGG
AACCATGATTACGAAAAGATTCACATATTTATGGATATCGATTCAAGTAC
AATACtctatttctttgaaaaagacAATAGTCAAGCCAAGGGCGAAGGTG
ATGATAAAATCAGCTCTGGGATTGATTCGGGGGTATCGGGAGAACCATCG
TCAGGAGATCatgatggtgatggtgatgaCAGTATCTCTGGTGATGGATG
TGATGACAAATGTCCTAATGGTTCTGAAACTGTTTAAATGGAAAAAACAT
TACGAAAATACTTTCCAACGGAGATGTTGGATGATATCAAATGTAATATA
ATTACTAAAAGAAGATCTATCAACAGTTTATATGATCTaaccaaatttaa
atatcttcCAAACTTCAAACATGAAAGCCTAAATGAAAATGTCAAGCCGT
CACTTTATTGTATATCACACAAAGGACATACAAAAATCACAATACTTTCA
ACAAAGGAGCCTTTATATACACCAGATAGATATCTATCGCTTGAGAATGT
CAACTATGGTATAATTACTGATACTAAAACAGAGGAATCAAATTTAGTAG
CATTTGGTGACACTTCAGCATGcagtaatgatttttttaagtaTAACATA
CGTACTGAAAAGACAGGTACAACAGTTTTAAAAGCTACATCGCTCGCAGA
AGACACTAAAtggaaatatattgaaaagttttttggtTTCTTAATGGTGT
ATACTGGACTTTCTAGAGATGTATTATTCAGAAAATTTAATGTAGCTGGA
CTTCTTACACTGCAAAATATGAAATGGACAACTACTTGGGATAATGGAGG
TCATCGATTTGATATTCTTACCAGTGACCAGGGAAAAACACAAATGAGGT
TGCCTACATTCGGTGGCTCATTTGCTGAGATAAACCCGGAAGATCGAAAT
GTTACCATTCAATCACCTGAAATACTGCTTGGGTCACGTAAAAAATTATT
CTCCATGTATTTCTCCTTACAAGAATTTTCCATTGTCGACTTTTTAAGAA
CTCAATTATCACCAAATTTTGGAACACTTGCTGATTTAATGGAGAAGCGT
GGAGAATTTGAATATTTAAAACTAGAAATGGCAGATTATTTCTTCACAAC
GCGCGGTGACTTCAGCAACATTCTACCAACTAAAGAAGCATTTAaacttg
agaaaaattctatgaTCCTTAAAGTGAGGGAGAAACACGATGGTAATTAC
CTTGGTATTTGTACAGGCAAAGTAAAAGTTGAtatgaaatcaaagaaaag
acCCTCATGGTTGGATAATATAAAGTTAGACTTGATCTCCAAAGTTCGAG
CTGATGCCCcgaaaaatcaagaatttgaaataaaattcaacCTTGACCAA
GAAAATCCAGATTGTGAAAAAGAGACTGGCAAATGGAAATTCTTAAACGA
GACAATCAATTTCTTCAAAGAAAAGGCTCGATGCAATTGTATATCAAATT
ACACACTAGCTGAAaggaaagttatgaaaaattcaaGTAAAGATAACCCT
TGTAAAGTAAAAGGAGACAGACTGGTTTccataaaaatttacaaattcaa
AGATGGAGGACGTTTAAGTTTCAATGTTACAACAAGGAACCATGATTACG
AAAAGATTCACATATTTATGGATATCGATTCAAGTACAATACtctatttc
tttgaaaaagacAATAGTCAAGCCAAGGGCGAAGGTGATGATAAAATCAG
CTCTGGGATTGATTCGGGGGTATCGGGAGAACCATCGTCAGGAGATCatg
atggtgatggtgatgaCAGTATCTCTGGTGATGGATGTGATGACAAATGT
CCTAATGGTTCTGAAACTGTTTAAATGGAAAAAACATTACGAAAATACTT
TCCAACGGAGATGTTGGATGATATCAAATGTAATATAATTACTAAAAGAA
GATCTATCAACAGTTTATATGATCTaaccaaatttaaatatcttcCAAAC
TTCAAACATGAAAGCCTAAATGAAAATGTCAAGCCGTCACTTTATTGTAT
ATCACACAAAGGACATACAAAAATCACAATACTTTCAACAAAGGAGCCTT
TATATACACCAGATAGATATCTATCGCTTGAGAATGTCAACTATGGTATA
ATTACTGATACTAAAACAGAGGAATCAAATTTAGTAGCATTTGGTGACAC
TTCAGCATGcagtaatgatttttttaagtaTAACATACGTACTGAAAAGA
CAGGTACAACAGTTTTAAAAGCTACATCGCTCGCAGAAGACACTAAAtgg
aaatatattgaaaagttttttggtTTCTTAATGGTGTATACTGGACTTTC
TAGAGATGTATTATTCAGAAAATTTAATGTAGCTGGACTTCTTACACTGC
AAAATATGAAATGGACAACTACTTGGGATAATGGAGGTCATCGATTTGAT
ATTCTTACCAGTGACCAGGGAAAAACACAAATGAGGTTGCCTACATTCGG
TGGCTCATTTGCTGAGATAAACCCGGAAGATCGAAATGTTACCATTCAAT
CACCTGAAATACTGCTTGGGTCACGTAAAAAATTATTCTCCATGTATTTC
TCCTTACAAGAATTTTCCATTGTCGACTTTTTAAGAACTCAATTATCACC
AAATTTTGGAACACTTGCTGATTTAATGGAGAAGCGTGGAGAATTTGAAT
ATTTAAAACTAGAAATGGCAGATTATTTCTTCACAACGCGCGGTGACTTC
AGCAACATTCTACCAACTAAAGAAGCATTTAaacttgagaaaaattctat
gaTCCTTAAAGTGAGGGAGAAACACGATGGTAATTACCTTGGTATTTGTA
CAGGCAAAGTAAAAGTTGAtatgaaatcaaagaaaagacCCTCATGGTTG
GATAATATAAAGTTAGACTTGATCTCCAAAGTTCGAGCTGATGCCCcgaa
aaatcaagaatttgaaataaaattcaacCTTGACCAAGAAAATCCAGATT
GTGAAAAAGAGACTGGCAAATGGAAATTCTTAAACGAGACAATCAATTTC
TTCAAAGAAAAGGCTCGATGCAATTGTATATCAAATTACACACTAGCTGA
AaggaaagttatgaaaaattcaaGTAAAGATAACCCTTGTAAAGTAAAAG
GAGACAGACTGGTTTccataaaaatttacaaattcaaAGATGGAGGACGT
TTAAGTTTCAATGTTACAACAAGGAACCATGATTACGAAAAGATTCACAT
ATTTATGGATATCGATTCAAGTACAATACtctatttctttgaaaaagacA
ATAGTCAAGCCAAGGGCGAAGGTGATGATAAAATCAGCTCTGGGATTGAT
TCGGGGGTATCGGGAGAACCATCGTCAGGAGATCatgatggtgatggtga
tgaCAGTATCTCTGGTGATGGATGTGATGACAAATGTCCTAATGGTTCTG
AAACTGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031421XLOC_031421Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049532-proteinTCONS_00049532-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049532-exon-scaffold_160-1491911889:320530..320802TCONS_00049532-exon-scaffold_160-1491911889:320530..320802Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1510915933:320530..320802TCONS_00049532-exon-scaffold_160-1510915933:320530..320802Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1575043694:320530..320802TCONS_00049532-exon-scaffold_160-1575043694:320530..320802Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1491911889:322967..323044TCONS_00049532-exon-scaffold_160-1491911889:322967..323044Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1510915933:322967..323044TCONS_00049532-exon-scaffold_160-1510915933:322967..323044Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1575043694:322967..323044TCONS_00049532-exon-scaffold_160-1575043694:322967..323044Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1491911889:323836..324344TCONS_00049532-exon-scaffold_160-1491911889:323836..324344Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1510915933:323836..324344TCONS_00049532-exon-scaffold_160-1510915933:323836..324344Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1575043694:323836..324344TCONS_00049532-exon-scaffold_160-1575043694:323836..324344Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1491911889:325142..325207TCONS_00049532-exon-scaffold_160-1491911889:325142..325207Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1510915933:325142..325207TCONS_00049532-exon-scaffold_160-1510915933:325142..325207Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1575043694:325142..325207TCONS_00049532-exon-scaffold_160-1575043694:325142..325207Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1491911889:325530..326422TCONS_00049532-exon-scaffold_160-1491911889:325530..326422Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1510915933:325530..326422TCONS_00049532-exon-scaffold_160-1510915933:325530..326422Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1575043694:325530..326422TCONS_00049532-exon-scaffold_160-1575043694:325530..326422Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1491911889:326793..327086TCONS_00049532-exon-scaffold_160-1491911889:326793..327086Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1510915933:326793..327086TCONS_00049532-exon-scaffold_160-1510915933:326793..327086Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1575043694:326793..327086TCONS_00049532-exon-scaffold_160-1575043694:326793..327086Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1491911889:327700..328764TCONS_00049532-exon-scaffold_160-1491911889:327700..328764Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1510915933:327700..328764TCONS_00049532-exon-scaffold_160-1510915933:327700..328764Clytia hemisphaericaexon
TCONS_00049532-exon-scaffold_160-1575043694:327700..328764TCONS_00049532-exon-scaffold_160-1575043694:327700..328764Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_160supercontigscaffold_160:320530..328764 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.427053	0.597672	0.377091	0.390792	0.5906	0.481596	0.771403	0.82479	0.312602	0.929364	0.566822	0.782533	1.58913	1.19387	0.846472	0.343037	0.224987	0.868499	6.15458	7.59922	0.514314	0.749771	0.380212	0.513486	0.42053	0.337065	0.483802	0.191721	0.290135	0.362123
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049532 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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