TCONS_00049465 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049465
Unique NameTCONS_00049465
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3008

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049465 ID=TCONS_00049465|Name=TCONS_00049465|organism=Clytia hemisphaerica|type=transcript|length=3008bp
AGCTGACCAGGAACAGACCCAATGGTATGCAGTACTCATTTTGTCTTGTG
CAAAACAAATACAAACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTA
CACTCACCCAAAATAAAGCTCAAAGAAATTATTGTACTTGATTGATATCA
CGGTGAGAAGTTGGAAAAGCCATGCTAAAAGACACGAAAATGGTGATGGA
AATACGCGTTAACAAAGATAAGTAACGCTTAATAAACGCTGGCTGATTTG
ATAAATATTGACAATCACTTCAAACAAAGAATTTCACACTCACAAAAAAT
CGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCA
GCGTGGTTTGGAGGAgcagagagaaaaaaagaaaagACATTAAAAGAATA
TTTGGTCTTTGGTTTATGAACATTATCCCACCAAATGCTGAGTTTAGAAT
AAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGGGAGGA
TGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCTTTGTGGTAAG
GTGATTTCAACGGCCAACGGCGACAAAGAGTCAGTTCATGTGCGCATAAA
GCGGCAACAAGCGCCACAAAACTACCAACTTCCACCACACCTTCGACAGC
CTCAACCAAACAATAGACAACATTTCAGACTTCCAGCTTATCTGAGACAA
CCACAAACCAACCCTTATCTTAGACAACCTCGACCTGATCCACGATATGC
ACCCAACCGACCAAGACCAAATCCACGTTTTCCCAATCCGCCGAGTCCTA
ATACTCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAAGGTATCAGCCT
CGCCCTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGTTATCCAAACCA
GCCACGCCCTACTTCGAATAGGGGTCAACCACCACGTAGACCTGGACCAT
TTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTACCAACAATCACCAACA
AGACCTGGAGAAATCTCCATCAATTTCATCAACAAATCTGGCAGGAGAAT
CAACATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGCTTCACTTTCA
CTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACCAGATAATTCT
TTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCTACATCAATGG
TCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACGAGTGTAGATG
CACGAATTACTTCACCCAACTTACGAGCAGAGCCAGTGAAGCGCGATCGA
AGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAATCAATGCT
GGACCACCATGGTGAACAGAAAGTCATGAATTACACCATCATGCTCATGA
ATTCGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGCGCCCATCTAC
GTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGTCGTATTACCG
TATCGTGACCAATCGTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATT
CAAGAGAAGTTGCTCAACGTAACAACTCGGTGGATTTTCATCTCATCTTG
ACAAGggaGGATATTGGACCAGCAGGGTTTGCAGCTATGTATACAATGTG
TAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACCCGACACTTCTT
TCGTCATCACTCATGAACTTGCACACGCTTTGGGTATCGATCATGACGAG
GACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATATTATGGTCAA
AAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAATGTAGTGCGA
AAAtgatttggcaaaatttgaaATACTTCACGTGTTTAAAGAACAAACCA
AAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACCAGGGGAGCT
GATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCTCCGCTCTTC
CTTGCACACCCAGGAATCCATTGACGGCGTGCAGATATTTATGGTGTCGA
CCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCTCCTTTGGA
AGGCTCAACGTGTGCCAAATCAAAGTGGTGCAAAAGAGGGCGTTGTGTGA
CCAAGATGAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAA
TTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCG
AAACAGAAGTTGCACCAATCCCAAGCCGAGGTTATCAGGGAAGAAATGTC
AAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGATT
TGCAAGCCTTTCAACATGCGACAATTGCTCTTAAGCGGAGAAATCGATTG
GGAAAACATACGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTA
AATGGAGAGTTTATCGAGAAAGCGAGCAACGTAGACAAGTAAAGTCGTTG
AATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAA
GAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACC
GAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGGGAAATAT
CTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGG
GTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTA
TGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATA
CACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGA
TCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCG
AGTATAAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGAT
ATAGCAATTgatgatattcaattttcttacGGGCTGTGTAATGCAAAGTC
AAGTCAAG
Run BLAST on NCBI

transcript from alignment at scaffold_159:136017..145191-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049465 ID=TCONS_00049465|Name=TCONS_00049465|organism=Clytia hemisphaerica|type=transcript|length=9175bp|location=Sequence derived from alignment at scaffold_159:136017..145191- (Clytia hemisphaerica)
AGCTGACCAGGAACAGACCCAATGGTATGCAGTACTCATTTTGTCTTGTG
CAAAACAAATACAAACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTA
CACTCACCCAAAATAAAGCTCAAAGAAATTATTGTACTTGATTGATATCA
CGGTGAGAAGTTGGAAAAGCCATGCTAAAAGACACGAAAATGGTGATGGA
AATACGCGTTAACAAAGATAAGTAACGCTTAATAAACGCTGGCTGATTTG
ATAAATATTGACAATCACTTCAAACAAAGAATTTCACACTCACAAAAAAT
CGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCA
GCGTGGTTTGGAGGAGCAGAGAGAAAAAAAGAAAAGGTGAAAGGATTTTT
TTGCGAAGGGTTTGAGTCATGATAATAAAACGCGTTTGTTGAGTATTTTC
GTTTCAACAAGTGATATTATTTATTATTGTACCATGAGCAAGTTGTTCGG
GATTCAATGTAAGATGACTCTTTTGCAAAACATCAATCACTTCTCATGTC
ATACTACACTGTGTACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAA
AAATTGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGAT
TTTTATTGGCAATTCAGTGGTTTCGAAGTTAATGATTCTAATTATTGTGT
AACACTTTCAACCTTGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTG
GTCTTTGGTTTATGAACATTATTCCACCAAATGCTGAGTTTAGAATAAAG
TGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGGAGGATGTTT
TCCACACCCTTGCTGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTT
CATCTACACTGTATTTCACTGTATATCATGTNGTTTTAGGCTGAAAGCTG
AAATACAGATATAGCTGACCAGGAACAGACCCAATGGTATGCAGTACTCA
TTTTGTCTTGTGCAAAACAAATACAAACAGAAGAAGATAATCTCCAAGTC
TCCGAATGTTTACACTCACCCAAAATAAAGCTCAAAGAAATTATTGTACT
TGATTGATATCACGGTGAGAAGTTGGAAAAGCCATGCTAAAAGACACGAA
AATGGTGATGGAAATACGCGTTAACAAAGATAAGTAACGCTTAATAAACG
CTGGCTGATTTGATAAATATTGACAATCACTTCAAACAAAGAATTTCACA
CTCACAAAAAATCGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCT
TATTGACTTTCAGCGTGGTTTGGAGGAGCAGAGAGAAAAAAAGAAAATGT
GAAAGGATTTTTTTGCGAAGGGTTTGAGTCATGATAATAAAACGCGTTTG
TTGAGTATTTTCGTTTCAACAAGTGATATTATTTATTATTGTACCATGAG
CAAGTTGTTCGGGATTCAATGTAAGATGATTCTTTTGCAAAACATCAATC
ACTTCTCATGTCATACTACACTGTGTACTACAAAAAAGAAAGCAAGAAAA
AAAAGTTTTGAAAAATTGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTT
GAAACTCGAGATTTTTATTGGCAATTCAGTGGTTTCGAAGTTGATGATTC
TAATTATTGTGTAAAACTTTCAACCTTGTTCCTTTCTTTCTTAGACATTA
AAAGAATATTTGGTCTTTGGTTTATGAACATTATCCCACCAAATGCTGAG
TTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTT
TGGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCTTT
GTGGTGTAAGTTTCATCTACACTGTATTTCACTGTATATCATGTCACTTA
TTATTAAGTAGTATGTTTGAACGTTAATTAGTACAAATAACCTAAAGTTT
AGGCAACACTTTGTTTCTAAACAATTCACTTTATTTTAGAAGGTGATTTC
AACGGCCAACGGCGACAAAGGTATGAGTCATTCCTAATACAAACTTTATA
CTATGCTGCTTTCTATGACGGAAGGGTTTTTGCGGTGATGAATATTTTGT
TCTTAAAACAAACAATAATGACACCCTTCATTTCATTTTTACAGAGTCAG
TTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAACTTCCA
CCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAGACTTCC
AGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAACCTCGAC
CTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACGTTTTCCC
AATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACCTGA
CCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAATC
CTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAACCACCA
CGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTA
CCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCATCAACA
AATCTGGCAGGAGAATCAACGTAAGTTTAACAACAAAGTCTTCTTATTCA
CCATTCAAAACGTGACCGAGATGAGCACGTAATTCCCTTTCCACCTTCTT
TCATTACAGATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGCTTCAC
TTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACCAGATA
ATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCTACATC
AATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACGAGTGT
AGATGCACGAATTACTTCACGTAAGAAGGCTCTCTCAGTGGAAACAATTC
AATATCTATTTAACAAGTAATTTGAAAAATATTTAGTGTACAGCAATTCT
TCTCAAATATCTAATTTTAACTTTAATTCCTTGCAGCCAACTTACGAGCA
GAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAACACAGGT
GGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAGTCATGA
ATTACACCATCATGCTCATGAATTCGGTACGTTAGAGTGCAAAACCTTCT
TCAAAGTATAATGAAAATCTTAAGAAGGTGATTGTTACCATTTTTCATCT
TCATCTACAGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGCGCCCA
TCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGGTCAGT
ACAACATATATTGTCTCAACACCACACACAGTACCAGACCCCTTCATTCA
CATTGTATTCTTCCCTTTCACATTTTCAGTCGTATTACCGTATCGTGACC
AATCGTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATTCAAGAGAAGT
TGCTCAACGTAACAACTCGGTGGATTTTCATCTCATCTTGACAAGGTATA
CATATTGCAGCATTTTCTCTAACCATTCATTATTTTACATCCCTACATCA
ATTTCTAATAATTGATCAAGGTATTTTCCTAAGATTTTCCAAACCTTCTC
TTCAATGGCAGATTTATATAAAAAGTTGTTTATTCCTTTTCCAAGCTCTA
TCTCTTGAACTGGAGCAAGAATCATCATTTTTAAAAGAGATTTATTTTAT
TTTCAGGGAGGATATTGGACCAGCAGGTAAGTTGATTTCTTGAAAAAATT
CTCCACCAGTGATTTGCTTATATAGATTTTGTACTGCTCAAAAACCTTCT
TCACTCAATTTTATCTTTCCAACACACACAGGGTTTGCAGCTATGTATAC
AATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACCCGACA
CTTCTTTCGTCATCACTCATGAACTTGCACACGCGTAAGTTATACAACAG
AGATAGGAGATCTTTATTTATTAGCTGTTACCCGTTATATTTTCTAACGT
TGACCATGTCTACAACACTGTGTTTTCACACCTTGGTAAAGTTTAAGCAA
CCGACACTAAGGTTTGCTGGCTGTTACTTATGATAATAGTTTCCCGATTA
CCCGATTACCGTAATCCGTTTTTGTGATTCAGTTTGGGTATCGATCATGA
CGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATATTATGG
TCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAATGTAGT
GCGAAAATGATTTGGCAAAATTTGAAGTAAGCAAATGTGTCAAAAGAGAA
CTAATTTTATTGATGAATATTGCTTTGAAAGAGGTAAATAGAATAAATAC
CGTAGATAACTAGATAAATAGCAATTTCTTTTTCCATTGTTTAGATACTT
CACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAAAAAGCA
TGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGTCGAAGC
TATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGGTTTGTTCCATCAT
TTTTGTTTTTCATGTATTCTATAACAGATATACTCTACTAGAATCGTAAG
TTGACATAATTCGATGTGAACTCATCATCGAAGGACGATTTGTAGTGTAC
TCTTTCACAATTTCAGAATCCATTGACGGCGTGCAGATATTTATGGTGTC
GACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCTCCTTTG
GAAGGCTCAACGTGTGCCAAATCAAAGGTGAGATTTCTTTTGGAGTTTAT
GTGTCTTATTTAAAGCTTACAGACAAAGAGGTAATTAATCATAAAGTTTC
TCATAAAAACATGAATTTATCGAACAATTTGTGGCTAATTTGGCTAACCA
TCATCTCTTTTTGGACAGTGGTGCAAAAGAGGGCGTTGTGTGACCAAGAT
GAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAATTCACAC
CACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGAAACAGA
AGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAAGCTTCC
ATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATCATACTTTA
TTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGT
AGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAA
GCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGAGAAAGTAG
AAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACCTTTTTATT
CTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGACA
GAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTATC
GCGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTTACGTTCTT
TCATTGGATTCGTCAATGTAAAACAACAATCTCCTTAAGAAAATGAAAGT
GAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAGTAAAGT
CGTTAAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAAT
TCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTC
ACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGGGA
AATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGG
AGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACAAGT
GTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAG
AAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAA
GGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAA
CATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAGTC
CATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGT
TTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTTCTTGAT
GATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTGTTTCTTAT
TAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGC
AATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTC
AAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCT
CAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTC
TCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTC
TTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAGATA
ATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTA
CCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAA
ACATTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAGATCAAACCAGTTAACGGTGGGTGGTCCAAGTATTCGGAAT
TCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGA
AACAGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAA
GCTTCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATCAT
ACTTTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGT
CAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGAT
TTGCAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGAGA
AAGTAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACCTT
TTTATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACAT
ACGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAG
TTTATCGAGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTTAC
GTTCTTTCATTGGATTCGTCAATGTAAAACATCAATCCCCTTAAGAAAAT
GAAAGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAG
TAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGG
AAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAAC
GCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGA
CAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCT
CTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATC
ACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCT
CGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGT
AAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGC
TATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTT
TAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTA
TTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTT
CTTGATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTGTT
TCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGA
TATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGT
CAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTA
TTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAA
ATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTT
CTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCC
AAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGT
AAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGT
AAATAAACATTTTATTNGAAATACACATTCGAAGGGGCAAGCATTCACGC
AAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGA
AGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAACAATAT
AATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGA
TTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAAT
ACTTGCTCCTTTCTTGATGATGAAAAGAAGGAATTACCGACCATGACCAA
TATATCTCAATATGTTTCTTATTAGATCACGATCGAAGCAGTGCGTGGTA
ATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTTCTTACGGG
CTGTGTAATGCAAAGTCAAGTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049465-exon-scaffold_159-1575043694:144806..145191TCONS_00049465-exon-scaffold_159-1575043694:144806..145191Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:144425..144459TCONS_00049465-exon-scaffold_159-1575043694:144425..144459Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:143337..143462TCONS_00049465-exon-scaffold_159-1575043694:143337..143462Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:143172..143202TCONS_00049465-exon-scaffold_159-1575043694:143172..143202Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:142572..143047TCONS_00049465-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:142272..142482TCONS_00049465-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:142016..142155TCONS_00049465-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:141848..141931TCONS_00049465-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:141647..141762TCONS_00049465-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:141416..141435TCONS_00049465-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:141208..141310TCONS_00049465-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:140866..141009TCONS_00049465-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:140606..140747TCONS_00049465-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:140365..140475TCONS_00049465-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:140075..140223TCONS_00049465-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:139870..139972TCONS_00049465-exon-scaffold_159-1575043694:139870..139972Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:137562..137673TCONS_00049465-exon-scaffold_159-1575043694:137562..137673Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:137023..137441TCONS_00049465-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1575043694:136017..136116TCONS_00049465-exon-scaffold_159-1575043694:136017..136116Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:144806..145191TCONS_00049465-exon-scaffold_159-1510915933:144806..145191Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:144425..144459TCONS_00049465-exon-scaffold_159-1510915933:144425..144459Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:143337..143462TCONS_00049465-exon-scaffold_159-1510915933:143337..143462Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:143172..143202TCONS_00049465-exon-scaffold_159-1510915933:143172..143202Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:142572..143047TCONS_00049465-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:142272..142482TCONS_00049465-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:142016..142155TCONS_00049465-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:141848..141931TCONS_00049465-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:141647..141762TCONS_00049465-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:141416..141435TCONS_00049465-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:141208..141310TCONS_00049465-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:140866..141009TCONS_00049465-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:140606..140747TCONS_00049465-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:140365..140475TCONS_00049465-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:140075..140223TCONS_00049465-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:139870..139972TCONS_00049465-exon-scaffold_159-1510915933:139870..139972Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:137562..137673TCONS_00049465-exon-scaffold_159-1510915933:137562..137673Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:137023..137441TCONS_00049465-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1510915933:136017..136116TCONS_00049465-exon-scaffold_159-1510915933:136017..136116Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:144806..145191TCONS_00049465-exon-scaffold_159-1491911889:144806..145191Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:144425..144459TCONS_00049465-exon-scaffold_159-1491911889:144425..144459Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:143337..143462TCONS_00049465-exon-scaffold_159-1491911889:143337..143462Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:143172..143202TCONS_00049465-exon-scaffold_159-1491911889:143172..143202Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:142572..143047TCONS_00049465-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:142272..142482TCONS_00049465-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:142016..142155TCONS_00049465-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:141848..141931TCONS_00049465-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:141647..141762TCONS_00049465-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:141416..141435TCONS_00049465-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:141208..141310TCONS_00049465-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:140866..141009TCONS_00049465-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:140606..140747TCONS_00049465-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:140365..140475TCONS_00049465-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:140075..140223TCONS_00049465-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:139870..139972TCONS_00049465-exon-scaffold_159-1491911889:139870..139972Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:137562..137673TCONS_00049465-exon-scaffold_159-1491911889:137562..137673Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:137023..137441TCONS_00049465-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049465-exon-scaffold_159-1491911889:136017..136116TCONS_00049465-exon-scaffold_159-1491911889:136017..136116Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:136017..145191 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.727941	0.734032	0.379899	0.200377	0	0.257577	1.98711	2.27863	0	0.000340265	0	0	0.715231	0	0.180034	0	0	0.0271057	1.0571	0.248946	0	0	0.30815	0
Blast
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BLAST of TCONS_00049465 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.999e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 2 
Query: 1358 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 2326
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049465 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS141.999e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
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