TCONS_00049264 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049264
Unique NameTCONS_00049264
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3478

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049264 ID=TCONS_00049264|Name=TCONS_00049264|organism=Clytia hemisphaerica|type=transcript|length=3478bp
AAACTTCTTCGCCATGCAAAGAAGCGAAGGGAAATTGGTTTTCCGAAGCA
AAGAACAATAGACGGGAAATCAGAACACTTCAACTGGATTTCGCACCTAT
TCTTTGCTACCCCGAATAAGattttactgtctataaaaaaacacaaaaga
gATGTGTCGATGGTGGCTAATGGTGACTTTGGTCACTCTTTGCTTTTATA
TTGCAAATGCAGGCAAGCAAAAGGAAAAAGCATCAAGGGAGGGTGGTGAT
GTGATGAAACAACCAGAAGTACTGGCAGCTTTagagaaaatcaagaaaga
tGCTATCGCTCAAGTCACCTCAGCTTTCATCAAagcacaaaaacaaaaga
aaaagataactGCTGCTTCATCTTCATCATCNTCACCTCAGCTTTCATTA
AAGcgcaacaacaaaagaaaaagataactgctgcttcatcttcatcatcg
aAACGAAGTGAGATTCAAGGAAGTGGTGATTCTGCAGAATCAGGAGAATC
ATCGGGATCCGGCCAATCGGACGACGTCGAGACAGACGTCATGCAAATTC
ATCACGCTTCTGCAAAGAAAAACAATGTGTTGAAATCTAAAGACAAAGCC
AATGCTGACAAGCGAACCAATAGTAAAGAAGAAAGCGATAAAGCTAAACT
TGAAACAATGGCAGCTAAGATCGAATCCAAAACTGGACATACAGAAGCTA
TGACGGGAAAAATGGAAGCCAAGGCTGCTAATACTGAGTCGAAGACAGGA
GAGCAAGAAGCCAAAGCATCTGAAATTGAAACCAAGACAGCTCCAGTAGA
ATTAAAAGCTGTGAAATTAGAAACGAAAGCTGGCAAAATTGAATCTGTTA
AAGGCAATGGGGGTCAACAAGAGGCAAAAGATGCCAAAGTGCAAAACGCA
CAAAAGAAGGATGAGCAGAAAAAGCCTGAATTGAAGACAGAAGTAAAGAA
AATGAAGGAGGAACCCCCTAAGAAAGTGGAGGAAGCCCCTAAAAAGGGAG
AGGAAACCTATAAAAAAACTGAGGAAGTCAAAAAAGTTGAGGATGCTCCA
AAGAAGCAGGAAGAAGTAAAGAATTTGACAGAGGATGCTTCGAAACAAGT
GGATGTTGCCAAGAAATTGAAGGAGGAAGCACCAAAGAAACAAGAGGAAG
CCCCAAAAAAATTGGAGGATGCTAAAAAGGCTGCTACAGGTGATGCACCA
AAGAAAGAAGCCGAGACAAAGAAAATAGAAGGCGACGGTAAGAAGGCTTC
CAAGAAAGAAAAAGTGGCAGCTCCTTCCAGTAAGAAGCAGGAGAAAGGAG
ATAAGAGGCATCACCACCATCACCATCATCATCACCATCACCACCATCAT
CATGGGGATGCGGACAAGAAAAGCAAGGCTCCTGACAGCAAATCTAATAC
CCCTGACCCTAAGGTAGCCATGGCTGCAGCTCAGTACCTCCAACAACAAC
AGATGGCTGCTACCTACCAGAATGCTATGATGCAGGGAATGCTCACCCAA
AACCCTACTTTACAAACTTTGAATAGTTTTCAACAGAATCTTGCTTTCAT
GGGAGCTCCTGGAGCCCCTAATGGTGGACAGATGTTTCAGCAACAACCTG
GTACCCAAGGTGCAGGTGCTGTTCCTGCAGGTGGAACCGTGCCCTTCCAA
GATGGAAGTAACCCACAGTTGAATGCTGCCTTCTTGGAAAAACTCGACTG
GGACAGGATCAAGAATGATAAAAACACACAGGAAGATTTTGCTAAGAAAG
GTAACATACCTCTTccgaaattgaaagaaattttcgctAAAGGAGCTACA
CGATCAGATATTGAGAAGGAAACACTGGCTTTGTTAACTAAAACCATCAA
AACTCAAGATAATTTGGCAGAATTGTTCAAGTATGAAATGGGAGCAGTGG
TAGAGGAAAGCAAAGGGAATAGCTTCACGTCTCAAAGACATGATTTGACA
AGTGACAGTAAAAGTGTCCCTGGAGAATTGGAATTTGGACAACCAGAAAA
CGTTACCAGTCATGCTAAAGatttcaaaactCCAAAGGTCATACCAGACA
GCTGCTCAAAGTATTTGAAGATGTACACAAACGGTGAACTAACATTACCG
GACTACGTCAAACAGATCAAGATCTGCAAACAAAATGAAGTGATTGCCAA
ACAGATTGCTAGAACAACACCACAACAACGAGAAGCGGTGGCAACTATGA
AACGAATTCAAGAAGAAGCCTACAAATATGCTCTTCATACTATGAAAAAC
TATACCCTGACTGCTCGAGAGCAAGCCAATGCGGTCATGTCACAGTGGCG
CTCTACAAGTTTCAGTGGTAAAAACGCAACAGCCGGTGGCATCATTCCAG
ATGCAGTCAAGATGTTTATGacccaacaaaacaaaacaatcccACAAGAT
TCGAATCTTGATTTCGTCAGCAAAAAATCAACGGATCCTCTTGCTCTTTT
CAATTCCCAGCAACAAAAAGCTTTAAACCCGGTCAAGAAGACAGTGACAC
CTGCGGCACCAAAGATTCTATTAGCGACACCAAACGCTGGCGGAGCCGCT
TTACCTCTCACTAACTCCTTAGTTGAAGCCATCAAAGCTAGCAGTAAGGA
AGATCCCTTAGCTTCTATTTTCCCAGGGCAGATACCAAAATCAGTAGCAG
CTTTAGAATCCAAACCTACGGTCACCGATGATGCGATCGCAGCAGAAGAA
TTCATGGCGAGCCTTGCGAATCCCTTATTCAAACAGATGCCTGTTGACAA
ATCACTTGTTGCCGCCCTCAGAAGCATGGGCGGAGTTAGCATCAATACCC
CAAATCCAAAATACCAGCTTTTGCCTGGTCTACAAAAACGACGAAAACGC
TCCCTCAGTTCTGCAGACACACACAGacattttgtttctaaagttttgaa
aaagcaTCTGCGAAGGAGACGTGAAGCAGCCGGGATCACGAAACCAATGG
AACGCTCCAGCATGGAGACTCCTGTTCGTATGACGTCACAAGAAGGTCCA
AAGCTTTTGGATAAGATCAGAGATATGGGGCGTGTTATAGCTACCCCTTA
GATGAATATTTTGGATATATATTTTACGCTTTATTTGTATAAAGCTTAAT
TTTGGTGCGATAAAATTCAGCCGGGCATAATGTTTTTAGGTTTCAAAGTA
ATTGGCAGCTCTTTATAAAACACATTAGGTATAATGTGCTAATCTTGAAG
AGCTTTAGACAAACTGAAACAAAATcgaaaatattattgaaatctTGTGT
ATAATCAACACCGCAGTATGCTCATGTCAGAGCTCAAAATATCTGAATAG
CAGATTTAGGAGACCTTTTTTCAGCATTTGTAATGTTGTGTCATTGTCAT
TCATAAATTTAGACGAAATCTTTATTCAAGAGAAAATTTTATGTTGTAAA
TATATTGAACTGTGTTAGTTATTTTAAAgagaaatattaaaaacaaaaca
actttTAGATGTTTTTCAAGATGATTGA
Run BLAST on NCBI

transcript from alignment at scaffold_154:249033..262900-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049264 ID=TCONS_00049264|Name=TCONS_00049264|organism=Clytia hemisphaerica|type=transcript|length=13868bp|location=Sequence derived from alignment at scaffold_154:249033..262900- (Clytia hemisphaerica)
AAACTTCTTCGCCATGCAAAGAAGCGAAGGGAAATTGGTTTTCCGAAGCA
AAGGTAACCGTTTCTACATTGATCAATTATTTGACCTCAGCTATTCGAAT
GTTTTGGATGTTTATTCGAACAAATTAATTACCCAAACAAAAGACTGCTC
ATAGTGGGTATAATGAAAACAAAAGCAAATCAAACAATGGTTGGCTGTTC
TATGCAAAATAAAGCTCACATCTTGAGCATAAAATATTGAAAATGGAAGA
ATTTCGTATCTAACAATAGAACAATAGACGGGAAATCAGAACACTTCAAC
TGGATTTCGCACCTATTCTTTGCTACCCCGAATAAGGTATTTTGCTTTTC
TGTTCGTTTTTGTGTCCCTTTTTTTATACCCTGGGTTATTATAAAGTAGT
AGACGAAATTTTCTCCTTTGAAACCTTAATTTCATAAATTTTATTGTTTA
AACTGTTTAGTTTATCATTTGATTAAGAACAAATGAGCTCTATTTGAGTA
TGAAACAGTTAATTTGGAACGAATTTTAGTTCGTTTTGGTTCGTTTTAGT
TTGGTTGGTTGAAAAAAGTATTCTGCACTTTGTTCAAATTTTTCTTCATC
GACCTGGACGAGCTGAGCTTTCTTGCAGAATTTCTGTCTGAAAAAAAAGA
GAATTAAAAAAATTGACAAACTTTTGACCAAGGTTTATAGTAAGAATTTA
AGATTCAATTTTCTTTTTCGTTTTTAGATTTTACTGTCTATAAAAAAACA
CAAAAGAGATGTGTCGATGGTGGCTAATGGTGACTTTGGTCACTCTTTGC
TTTTATATTGCAAATGCAGGCAAGCAAAAGGAAAAAGGTAAGATTTTTGG
TATTTATCATTAGACATTCAAAATGTCCATGTTGAGGGGACTTTTTTTGG
AATATCAGAGATCCTACCTGGGTTTGTTTTTATTTTTGAGGTATTCATCT
GGATTTTGATCATGAAATTTCTTTGATACCCTAGACTTTATAGCTTTTTT
TTCTGAACAGAAATTCTCTTCGAAGTAGGGGCATTTGTTTTTCTGAAATA
GCCGGCCTATTTGAGGGTTTGCACTTATACTCATGTCGAACTAAAACCCC
TATTATATACCGGGTGTCCCAGAAAAAAGTTCCGCTCTTTGAAGTGAATT
TTCTCCAGTTCTATGAATTTCTAAACAATCAATCCTTTTGCATTGGAAAG
AGGAAGGATAAAATTAAATTTTGAGGGGTCATTTATCAAATTTAGTCGAC
TGGATCAAAATGAATAAAAATTCTTTTTTTTGTAATTCCTCAAAAACGTT
GAAAATCGACCTATCAAATTGTTATAGAAGCATAATTGCATGGAGCATGA
TTTTCATTGTTGAAGCAATAAAAACCTAATGGAAGTATCTTTTTANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATCTGAAAAACTGAAAAATTTGATAATTC
CAACCGATATTTGACTTCAATAGCTACACTGATGAAATCAGCGCTACTTT
TGACTTTAGGGGTCCTTAAGCCAAAATTTGAAGCTGAATTCCATAGAAAA
TAATTGGAAATGACCCAATTGAAACTTTTTAGTCCTTTAGAGAATTATTT
CAAGCATTTTTTGTTTTCATGTCCACTTTAAACTCTTTATTCCTGCAAAA
AAGTAATAATTAGGTTATAAAATTTGATAGGTCGATTTTCAACGTTTTTG
AGCCTTTTCAAAATGAAATTTTTATTCATTTCAGCATAATTTTTGATCTA
GTTGACCAAATTTGATAAATGACCCCTCAAAATTTAAGTTTATCTTTCAT
CTTTCCTATGCAAAAGAATTGATCTTTTAAAAATTCATAGAACTCGAGAA
AATTCACTTCAAAGAGCAGAACTTTTTTCTGGGACACCCGGTATAAAAAA
CATGTGGCTCTCATAAGTTATCTCGGTAACTGGCTTTTCAAAACTGAAAA
ATACAATCTTCCCAACAAATATCAAACTTGTAAACAATACTGTTTTTTTT
CCATGAAGAGCCTCTACCTCCACTCTTTATATCTTCTTTTAAACCTTGAA
TCTTCTCTTATAAGACTTCTAGAGACATTTAGTTTGGATATTATCTCATG
TTCTCGGCAGTGCTGGGTGCAGGTTTTATCAAATATATTGTTTAAATTTA
TTATTATTTTTTCATCAGCAGCATCAAGGGAGGGTGGTGATGTGATGAAA
CAACCAGAAGTACTGGCAGCTTTAGAGAAAATCAAGAAAGATGCTATCGC
TCAAGTCACCTCAGCTTTCATCAAAGCACAAAAACAAAAGAAAAAGATAA
CTGCTGCTTCATCTTCATCATCNTCACCTCAGCTTTCATTAAAGCGCAAC
AACAAAAGAAAAAGATAACTGCTGCTTCATCTTCATCATCGAAACGAAGT
GAGATTCAAGGAAGTGGTGATTCTGCAGAATCAGGTATGTTTAACCATTA
CAGAGTTTGTATTTGCATCATCACTTTTGAGGAAAGCGGAGTGACTGAAG
CGGTTTAGAATAACCTGACCCGTAAAATAGAGGACGGTAAAAGTGCTCAG
TCAGTTAGGATCTAAATCAAAAGCTAACCGTCTCCGCCACGGAAAAAAAT
ACATTAGCTCGGAGGAAAACTTCATGGATTTTGTGATATTACCCGTCAGG
CACGATATTTTGAAGTATTGAGAATTTAATGTTCACCCAAGTACTTATTT
GCATATTTAACTGTCATTCTTCTAAATCAGTTTTTGTTTCCATTGAAGGA
GAATCATCGGGATCCGGCCAATCGGACGACGTCGAGACAGACGTCATGCA
AATTCATCACGCTTCTGCAAAGAAAAACAATGTGTTGAAATCTAAAGACA
AAGCCAATGCTGACAAGCGAACCAATAGTAAAGAAGAAAGCGATAAAGCT
AAACTTGAAACAATGGCAGCTAAGGTACTTTGCTATATATTTATTCATTT
TCCTAATTAATTACAATATCAAAATATCCTTCACGANACTACATATTTAT
TCATTTTCCTAATCAATTACAATATCAAAATATCCTTCACGAAAAATTTA
AAACTGTTTCCTTTCAGATCGAATCCAAAACTGGACATACAGAAGCTATG
ACGGGAAAAATGGAAGCCAAGGCTGCTAATACTGAGTCGAAGACAGGAGA
GCAAGAAGCCAAAGCATCTGAAATTGAAACCAAGACAGCTCCAGTAGAAT
TAAAAGCTGTGAAATTAGAAACGAAAGCTGGCAAAATTGAATCTGTTAAA
GGCAATGGGGGTCAACAAGAGGCAAAAGATGCCAAAGTGCAAAACGCACA
AAAGAAGGATGAGCAGAAAAAGCCTGAATTGAAGACAGAAGTAAAGAAAA
TGAAGGAGGAACCCCCTAAGAAAGTGGAGGAAGCCCCTAAAAAGGGAGAG
GAAACCTATAAAAAAACTGAGGAAGTCAAAAAAGTTGAGGATGCTCCAAA
GAAGCAGGAAGAAGTAAAGAATTTGACAGAGGATGCTTCGAAACAAGTGG
ATGTTGCCAAGAAATTGAAGGAGGAAGCACCAAAGAAACAAGAGGAAGCC
CCAAAAAAATTGGAGGATGCTAAAAAGGCTGCTACAGGTGATGCACCAAA
GAAAGAAGCCGAGACAAAGAAAATAGAAGGCGACGGTAAGAAGGCTTCCA
AGAAAGAAAAAGTGGCAGCTCCTTCCAGTAAGAAGCAGGAGAAAGGAGAT
AAGAGGCATCACCACCATCACCATCATCATCACCATCACCACCATCATCA
TGGGGATGCGGACAAGAAAAGCAAGGCTCCTGACAGCAAATCTAATACCC
CTGACCCTAAGGTAGCCATGGCTGCAGCTCAGTACCTCCAACAACAACAG
ATGGCTGCTACCTACCAGAATGCTATGATGCAGGGAATGCTCACCCAAAA
CCCTACTTTACAAACTTTGAATAGTTTTCAACAGAATCTTGCTTTCATGG
GAGCTCCTGGAGCCCCTAATGGTGGACAGATGTTTCAGCAACAACCTGGT
ACCCAAGGTGCAGGTGCTGTTCCTGCAGGTGGAACCGTGCCCTTCCAAGA
TGGAAGTAACCCACAGTTGAATGCTGCCTTCTTGGAAAAACTCGACTGGG
ACAGGATCAAGAATGATAAAAACACACAGGAAGATTTTGCTAAGAAAGGT
AACATACCTCTTCCGAAATTGAAAGAAATTTTCGCTAAAGGAGCTACACG
ATCAGATATTGAGAAGGAAACACTGGCTTTGTTAACTAAAACCATCAAAA
CTCAAGATAATTTGGCAGAATTGTTCAAGTATGAAATGGGAGCAGTGGTA
GAGGAAAGCAAAGGGAATAGTGAGTATCTTTTTGTGTTTTTATCTGTGTA
CAAAGTTCTTTCGTCTCAGAGTGTGTTTCCGTCTAATAGAGATACAAAAA
AAGGGGCTTTTCCTTTCAACAAAGTTCTGCAAAAATTCTGCAAAAATTAA
AGAATCTTGTCTAATTTTTTGTTAAAAGTCCATTTCGATCTGAGACAATC
TCTACAAACTACTGATGCTTTCTTGTACATCGATTCTTTAATCTTTCTGA
ATCCAGTGGTTAGGGTTTCACCCGTAAACTTAGGTCCCAGCTGAAATTTG
AATAGGCATTATTTGTTATCATTGTTTCAAAAATCACTTGTCAAAATGTT
AGTACGTCAGCATCAAGGAACAACCAACATGCATAAAAATAATAAAAATA
GAGTGGGATTTCCATTAATCGAACTTATTATTCAAATCTTTTTATAACCG
GAACACAAAACTCCGTCCCCGTCAAGGGGAGACTCTGGTAAATTAATAAT
CTCTACAATTTTAATTTCTCTGCAATTCGAACACTTCAGGAGTCCAGTGC
GAATTCGAATTTGCGAAATTCAACTATATTATCATTCTAATTGTGCTACA
GTATCGGCTACATTATTTTATTTCATCAAATTATAAAGTTAAATTTGAAT
AATTACTACATTGTCAAGTGGCAGTCGACGTCAAGACAATCCCCAACTCC
CGGACTATAAAAATAATTTTGGAATTTTAGTTCGACCTAAGGAATAGTTT
TTACCATGAAATACATTTTTCATTAATATTAAATTTGAATAATTACTACC
TCGCAAAGTGGCAGTTGACTTTTACTCATTCCTTAGCTCCCGGACTATAA
AGATAATCTTAGAATTTCTGTTCGACCTAAACAATAGTTTTCACCATTTA
ATACATTTTTCTTCAGGCTTCACGTCTCAAAGACATGATTTGACAAGTGA
CAGTAAAAGTGTCCCTGGAGAATTGGAATTTGGACAACCAGAAAACGTTA
CCAGTCATGCTAAAGGTCAGTGTCACCTCTCTTCATGATATTATGACGTA
ATGTTACATACGGAAGCACCCACAAATGACCGGGTATTAATTGTCATTAG
TTTTGAATTTAAACAATGAAACTAATGGCAAACGCCTGGGCTATTTTAAG
AGCTTCCGTATGAAATATTTCATCACGAATAATCATTCTTTCTTTAATTT
TCTTGACTACTTTTAGTCTCTAGTAATCTTGGATTCCTTAATTCAGACGG
GGATCTGGATAAAGAAATGGCGGATTAGGTTTTTTCAAAAACAGATAGTT
CCAAGACAAAAATTCTTTGTATGAGTCACTGAAGGCTAACCCAAAATTAA
TTTTAAATTGCTTTGGAGAAATTCTTCAAGGCCATAGAGTAGGTCTTCTA
AAAAACTGTGCGATATAGTTTAATAATGATACGCTTTCTCTAATTTGCCC
AAGATACCCGAAAATCGCAAAATGTTTCTGCCCTCAGAGTACGATCTCTC
TTATTTTGAAAAGGTAAATATTAAAAATACAGTTGTGTATGAGATGTTTT
TTTTTTTGAAAACGACGAAACGACGTATTTTGAAAATATATTGATATCTC
ACACAAGATTAACTGTGAAACCTTTTCGTCGTTTTTGTCATTTTTAGATT
TCAAAACTCCAAAGGTCATACCAGACAGCTGCTCAAAGTATTTGAAGATG
TACACAAACGGTGAACTAACATTACCGGACTACGTCAAACAGATCAAGAT
CTGCAAACAAAATGAAGTGATTGCCAAACAGATTGCTAGAACAAGTATGT
CTGTGTTTATTTTGCACTTTCTTTTTTTCACACTGTAGTACTAGATATTT
ACAGTCGATATGTAATTTTGATATTCGTAATTTCTTTTCCAACAAACTCA
TCCCGGAGAATCACGGTTAATGAGGGTGTTTTTGTAAATAAAATGATATA
CGCAAATCAAGAATTCTTCAGCCGTGTAATAATTCTCTTAATGGAAACAT
CCCGCAAAAACGAAAGTCGCCCTATTTTCAAGTGAAATATTGAAGTTTGG
TTCTAGCGCTTTCTGTTTTTGTTCTAAAATATAACCATTAAAAGATATTT
GTCAAAATCAAAATGATCTTTTCCATAAAATATTCGTTTTAGATTGAGGC
TCTCTAATTTGACGATCTAGTATTATGAACACTCCATTATTCGATCATGT
TGAAAGTCACCGCAAACAAAGAACCATTATATACGCTTTACCATTCTATA
TATGCTCCCTTATTCGATGAAAGTAAAATTTATCTTGAAAATCGACTTTG
AGAGTAGCGTCAATTGTAGATCTTGAAAATGGATTTTTACTTATGATTCT
AGCACCACAACAACGAGAAGCGGTGGCAACTATGAAACGAATTCAAGAAG
AAGCCTACAAATATGCTCTTCATACTATGAAAAACTATACCCTGACTGCT
CGAGAGGTATTATAATTCAACCCTTTAAGNGACTTACGCAAATCAAGAAT
TCTTCAGCCGTGTAATAATTCTCTTAATGGAAACATCCCGCAAAAACGAA
AGTCGCCCTATTTTCAAGTGAAATATTGAAGTTTGGTTCTAGCGCTTTCT
GTTTTTGTTCTAAAATATAACCATTAAAAGATATTTGTCAAAATCAAAAT
GATCTTTTCCATAAAATATCCGTTTTAGATTGAGGCTCTCTAATTTGACG
ATCTAGTATTATGAACACTCCATTATTCGATTGTATTGAAAGTCACCGCA
AACAAAGAACCATTATATACGCTTTACCGTTCTATATATGCTCCCTTATT
CGATGAAAGTAAAATTTATCTTGAAAATCGACTTTGAGAGTAGCGTCAAT
TGTAGATCTTGAAAATGGATTCTTACTTATAATTCTAGCACCACAACAAC
GAGAAGCGGTGGCAACTATGAAGCGAATTCAAGAAGAAGCCTACAAATAT
GCTCTTCATACTATGAAAAACTATACCCTGACTGCTCGAGAGGTATTATA
ATTCAACCCTTTAAGTATAATTTAACCCCTTTAACAACCCTCCCTTCGTC
GGTGACTTAAATTCTTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATA
AATTAACCTGTGTTCGTTCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTC
CGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCG
TTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTT
CGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCG
TCCGTTCGTCCGTTCGTCCGTTCGTCTGTTACCAACTTTTCTCAGGATTG
AATCATAGGAATCTTTTGATTTTTGGTCCAAGGGTGCAAAATGGTGGTGG
CCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAAATTTCTTGGGCAAAT
TTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAAT
TGGATCGTTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCAT
ATAAAGTCAGATCGGTGTCAAAATCAAAAGGTCAGGTCGTCGGGTCGAAC
CGTCGGGTCGTAATATCAAAGGGTCGGGTCGTAATATCAAAAGGTCAGGT
CGTCGGGTCGAACCGTCGGGTCGTAATATCAAAGGGTCGGGTCGTAATAT
CAAAGGGTCGGGTCGTAATGTCAAAAGGTCAGGTCGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCGAACGGTCGGATCGAAGCGTCGAGCCAGACCGCCGGG
ATCCAATGCCGGTTTATCGGGATATTTAACATCGTTCTGTAAAATATCAT
TTTTTAAAGGGACAATCCAATACTAAGCAAATCAAAATATTATGGTCACG
TGTCTGGAATTTGATTGGTCGAGCGCGATAAAAGTTTACAATTTGATTGG
TCGAACGGGATTCTCACTTTCGTTTTCGTAATCTAAACAAACCGAAAAAT
ACTTTGTGAATGAAAAATGAAAAATCTTTCGTGTAATTTCTTCTGTCTTG
TATCATACTTATACGAAGGAAATTTTCTGTTTTGCTATGCCAAAATTGAT
TCACAAATGTAAATACTACACAAGAGTTTTTCTATACAGAAAGAGATTGT
GAGATGAGAAGATATAAAAAGTTCTTTTTTGTTTTCCTGTGTTCTTTGTG
TTTCATCAAGAGCAGATGAACAAAATAACAAATAGTAAATAATGCATAAA
ACATTTTTTGAAAAAAATANGTTTTCCTGTGTTCTTTGTGTTTCATCAAG
AGCAGATGAACAAAATAACAAATGGTAAATAAAGCATAAAACATTTTTTG
AAAAAAATAACATACATTACAAAATTCCTGTATAAACATTTGGAAATACT
TTATGGCTTCACTTTTAACAAGAGTGATGCAAAAGTATTTGAATAATAAT
ATGACCTCCTCTTTGAAGTTGCCTTCCAAAATATTTCTTTCCATTCAAAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAATATTCCACGTTCACTCAAGTTAACAACGTAAATAAAATGTA
AACAGTTCTTCTTACAGCAGCATATCCATAATACCACTGTAAAAAATGCA
GCTATGTCCATCAATCACGAAACAAACTGGTACATGAAAAATATGTTCAA
CTGTTCCCAAATCATAGCATGTACGAGGACTTTAAAAAAGGGTGCAGAGA
TATGTAGCTTTAGAGTCGAACCATGCCAGAAGCACAAGAAGACTAAGTCC
CTTGATCGATGGTTTGATCTTAATTTTCAATGATAGTCACAGGATTTTAA
ATTTAATCAAATCAATGTGTCCTACTGCTACTTCCTCAACATTATTATTT
CATAAAATTCCAAATCAGTACAATATGATGCTCAGAACCTCAAAAGCTCA
GAGTTTTTCGTTCATCGTAGAGTTACTTTTCACTTCATTTTATTTATTTG
GTTCATGCAAAATCTCATGATACAGTGCTTTTATCGAGAAAATAATATAC
GCGTTCCATGATTCTATCGAAGTATTCTGAAGTTATGTAGACTACAGTCT
CCAGAGTTGATTTTTCAAGTCATTGGATGAACAAAAATGTCCCATATTTT
GAAGTACGAACCATGAAAATCTTCTTTGAAAAAGGCTTTCTTGTCTTGAT
GAGTTTCATACACTTCTCAGATCCATATATGCACACTTTCAAGAGATGAA
GTCTTTCTTGTCTCTTGTTGATGAGTTACATTTCACTTCTCAGATCCATA
TGCACACTTTCGAGAGAAAATAGAAATCTCTTTCTCCTCTTGAGTGTTCA
AAATTGACTACATTGTTATTTAACTGAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNACTGAAAGAAGCAAGAGAAGAGATAG
TTCTGTATAAATTGGTTAGCAAAAGAATTCAGCCTTGTTGGAAATATCTT
CTTGTATCTTCAGCATCATAGAAATATGAACATTGAAACTTTGCACAAAG
ATAGTTGAATAAGAACACTTCATGATTTTGATAATATAAACATGTTATAG
ACACCTGAAAGTATAATTATTTAAATCAGTGGTAAAAATATAAACATTTC
ACTGATCGAATTATTTCGCTTCCATTTTGCTTTCACTTTTGTTCTTAGTA
TTATAGTATTTAGTTTATAGTATTCTGCGGAACGAGATTTTAACTAATCT
GATAAGCCCGATAAACCCGATAATCCGGCATTGTATCCCGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGGCAGTCTGGTT
CGACGCTACGACCCGGCCGTTCGACATCACGACCCGACCTTTTGATATTA
CGACCTGACCCTTCGATATTACGACCTGACCTTTTGACATCACGACCCGA
CGGTTCGACCCGATGACCTGACCTTTTGAGATTACGACCCGGCGGTTCGA
CCCGACGATCTGACAGTTTGACATTACGACCCGACGGTTCGACCCGACGA
TCTGACAGTTTGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCATGTTT
ATCTATAAGAATCACTATTAATAAGCATATATCAATGTTCTTAGTCAAAT
TACTCAATTTTTTCATGAGATAGATGTTTTTTTTTGCTCATTGGGGCTTA
CTTTTGATAAATATTAGTGTTTCGACATGAAATTTTGGCTGCTTGGCGTT
TTTTTATAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATTAT
CAATTACTTAGGTATTGCCTTTTTTCGAGATTGGCTCTTTCATTCTTTAT
GAATTTTTGCACAAAGATACATAACTATAAGCCCTCGAATGTGACGCAGC
CCGATTTCGAAAAAAAATGTTTTTGGGCAAATTTGGGCCAAAAAACAGCT
AAAAAACGGGTTTTTTGGACTTTGTGAAATATTGGATCATTGTTTTTTTC
TGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCGCATCTCTATCTATAAGAATCACT
ATTAATAAGCATACATCAATGTTCTTAGCCAAATTACTCAATTTTTTTGA
TGAGATAGATGTTTTTTTTGCTCACGAAGTCTTGAATATGAAAGAATATT
TCAAGAGCATGAAATTTTGTTTTCTAAACGTTTTTTTTATAAGAAACAAA
CGACTAATTTTGATAGATCGTCACTGTTTATGTTCTGAATGATTGTTTAA
TGGTCACGTCACGTAGATATCAATTATATATGTGTTAATACATAACCAGG
TAGGTCCATAAAAGTATCACTTGTTCTTTGACTATTTTGGGTGACCTACA
CAATTGGAATTAGAGAAGAGAGAAGGTTTTCAGGGCCACTTTTGCAGCAA
AATTTGACAACAACCCCCCCTTGTTAGTTACTTGAAGTCTTTGACACTTT
TGGGATTCTATACAATTGTAATTAGAGAAGGGAGAAAGCTTTAAAGGCCA
CTTTTGCAGCATGGATATTGTCCAGAATACCCCCATTCTTGTCGGTGACT
TGAGGCCTAATTAAAGAAGGTTGAAGGTTATTTTGGTCACTCTTGTAGCA
TGGATATTCCAAAAGGGATGTTTTGAGCATACCTGGGAAAAAACTTTTTA
TATAGACTTCTCCTGAAGTTGGGCGCCTGATCTATAATTATGTCAAATTC
CACGCTAATAACAACAGCACTTTGACAACAGTCTTTGGCGAGATTATTGC
ATACTCGGGCGAGAAATCGTGTCAAACTCCTTCACGTTTGTTTTCTTTCC
TTATCCCTTAGCAAGCCAATGCGGTCATGTCACAGTGGCGCTCTACAAGT
TTCAGTGGTAAAAACGCAACAGCCGGTGGCATCATTCCAGATGCAGTCAA
GATGTTTATGACCCAACAAAACAAAACAATCCCACAAGATTCGAATCTTG
ATTTCGTCAGCAAAAAATCAACGGATCCTCTTGCTCTTTTCAATTCCCAG
CAACAAAAAGCTTTAAACCCGGTCAAGAAGACAGTGACACCTGCGGCACC
AAAGATTCTATTAGCGACACCAAACGCTGGCGGAGCCGCTTTACCTCTCA
CTAACTCCTTAGTTGAAGCCATCAAAGCTAGCAGTAAGGAAGATCCCTTA
GCTTCTATTTTCCCAGGGCAGATACCAAAATCAGTAGCAGCTTTAGAATC
CAAACCTACGGTCACCGATGATGCGATCGCAGCAGAAGAATTCATGGCGA
GCCTTGCGAATCCCTTATTCAAACAGATGCCTGTTGACAAATCACTTGTT
GCCGCCCTCAGAAGCATGGGCGGAGTTAGCATCAATACCCCAAATCCAAA
ATACCAGCTTTTGCCTGGTCTACAAAAACGACGAAAACGCTCCCTCAGTT
CTGCAGACACACACAGACATTTTGTTTCTAAAGTTTTGAAAAAGCATCTG
CGAAGGAGACGTGAAGCAGCCGGGATCACGAAACCAATGGAACGCTCCAG
CATGGAGACTCCTGTTCGTATGACGTCACAAGAAGGTCCAAAGCTTTTGG
ATAAGATCAGAGATATGGGGCGTGTTATAGCTACCCCTTAGATGAATATT
TTGGATATATATTTTACGCTTTATTTGTATAAAGCTTAATTTTGGTGCGA
TAAAATTCAGCCGGGCATAATGTTTTTAGGTTTCAAAGTAATTGGCAGCT
CTTTATAAAACACATTAGGTATAATGTGCTAATCTTGAAGAGCTTTAGAC
AAACTGAAACAAAATCGAAAATATTATTGAAATCTTGTGTATAATCAACA
CCGCAGTATGCTCATGTCAGAGCTCAAAATATCTGAATAGCAGATTTAGG
AGACCTTTTTTCAGCATTTGTAATGTTGTGTCATTGTCATTCATAAATTT
AGACGAAATCTTTATTCAAGAGAAAATTTTATGTTGTAAATATATTGAAC
TGTGTTAGTTATTTTAAAGAGAAATATTAAAAACAAAACAACTTTTAGAT
GTTTTTCAAGATGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031272XLOC_031272Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049264-exon-scaffold_154-1575043694:262848..262900TCONS_00049264-exon-scaffold_154-1575043694:262848..262900Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:262565..262631TCONS_00049264-exon-scaffold_154-1575043694:262565..262631Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:262064..262173TCONS_00049264-exon-scaffold_154-1575043694:262064..262173Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:260317..260579TCONS_00049264-exon-scaffold_154-1575043694:260317..260579Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:259827..260002TCONS_00049264-exon-scaffold_154-1575043694:259827..260002Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:258432..259683TCONS_00049264-exon-scaffold_154-1575043694:258432..259683Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:257436..257534TCONS_00049264-exon-scaffold_154-1575043694:257436..257534Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:256657..256803TCONS_00049264-exon-scaffold_154-1575043694:256657..256803Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:255995..256098TCONS_00049264-exon-scaffold_154-1575043694:255995..256098Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1575043694:249033..250239TCONS_00049264-exon-scaffold_154-1575043694:249033..250239Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:262848..262900TCONS_00049264-exon-scaffold_154-1510915933:262848..262900Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:262565..262631TCONS_00049264-exon-scaffold_154-1510915933:262565..262631Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:262064..262173TCONS_00049264-exon-scaffold_154-1510915933:262064..262173Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:260317..260579TCONS_00049264-exon-scaffold_154-1510915933:260317..260579Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:259827..260002TCONS_00049264-exon-scaffold_154-1510915933:259827..260002Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:258432..259683TCONS_00049264-exon-scaffold_154-1510915933:258432..259683Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:257436..257534TCONS_00049264-exon-scaffold_154-1510915933:257436..257534Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:256657..256803TCONS_00049264-exon-scaffold_154-1510915933:256657..256803Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:255995..256098TCONS_00049264-exon-scaffold_154-1510915933:255995..256098Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1510915933:249033..250239TCONS_00049264-exon-scaffold_154-1510915933:249033..250239Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:262848..262900TCONS_00049264-exon-scaffold_154-1491911889:262848..262900Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:262565..262631TCONS_00049264-exon-scaffold_154-1491911889:262565..262631Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:262064..262173TCONS_00049264-exon-scaffold_154-1491911889:262064..262173Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:260317..260579TCONS_00049264-exon-scaffold_154-1491911889:260317..260579Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:259827..260002TCONS_00049264-exon-scaffold_154-1491911889:259827..260002Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:258432..259683TCONS_00049264-exon-scaffold_154-1491911889:258432..259683Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:257436..257534TCONS_00049264-exon-scaffold_154-1491911889:257436..257534Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:256657..256803TCONS_00049264-exon-scaffold_154-1491911889:256657..256803Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:255995..256098TCONS_00049264-exon-scaffold_154-1491911889:255995..256098Clytia hemisphaericaexon
TCONS_00049264-exon-scaffold_154-1491911889:249033..250239TCONS_00049264-exon-scaffold_154-1491911889:249033..250239Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:249033..262900 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.0185187	1.32871	0.811304	0.221426	4.61021	2.80255	3.83884	1.47014	1.02507e-06	1.41443	1.14428	1.69218	0	0	0.355699	0.891655	1.3219	1.00834	2.62299	0.710191	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049264 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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