TCONS_00049218 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049218
Unique NameTCONS_00049218
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1813

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049218 ID=TCONS_00049218|Name=TCONS_00049218|organism=Clytia hemisphaerica|type=transcript|length=1813bp
ttgaaaatatttcagagTATCTTTAATAAGAcaaagaaaatataaacaac
CATGTTGGCAAAAGCATTTTCCAGAAGATCACTAACCAAATGCTTTAAAA
AGACAAACTTAGAATGTATCCGGACCCTGACCGGCCTCAAAACGCCAAGC
CAATGTGTCATACAAACACCAAAAGATATGCCGAATTTGATAGATTGCCG
TCAAGGAGAAAgGACACCAGGTCTGTTCACATCAGAAGAGATGGACTCAC
GTTTATCAACCCTCCGTAATAAAATGTCTGAAATGGGAATGGATGCAGTT
GTGTTTACCTCATATCACAATATTAATTATTACAGTCAATTTTTGTATTG
TTATTTTGGAAGACCTTATGGTTTAGTTATCACTAAAGATAATATTTCAA
CTATCTCTGCTGGTATCGATTATGGTCAACCTTGGAGGCGCGGTAATAAC
GCTGAGAGCGTCACATACACGGACTGGGAACGAGATAACTTCTTCAAAGC
AGTCAAAGAACTTGTGGGTAACAACCAAAATGTTGGTTTGGAGTATGACC
ATTGTCATTTACAATActttgaaaaattccaaaaggCACTTCCTGAAGCG
AAATTTGCAGATATTGGATTACCCACAATGAAATTAAGGATGGTGAAATC
GCCGGAAGAAATTGCTGTGATCAGAAATGGTGCACGAATCGCTGACCTTG
GCGGATATGCCGTGCGTGAAGCATTGGAGGAAGAAGTACCTGAACACGAA
GTTGCTTTACATTCAACAAGGACAATGATCAGAGAGATTGCAAACACATA
TCCACAGACAGATATTATGGACACTTGGACATGGTTTCAATCAGGTATAA
ACACAGACGGAGCTCACAATCCAGTCACCACAAGAAAAGTCAACAGTGGA
GATATTCTCAGTCTAAACTGCTTCCCAATGATACAAGGATACTACACAGC
GCTTGAGCGTACGTTATTTTTGAACCACGCGTCAGACGCGCACATCAAAG
TCTGGGAAGCAAACGTTGAAGTCCACGAACGCGGGCTAGAACTTATCAAG
CCTGGAGTCAAATGCTCTGAAATTGCACATGAGCTAAACGAAATCTTCAA
GAAACATGATCTTTTGAAATACCGTACATTTGGATATGGTCATTCTTTTG
GAAGTTTGTGTCATTATTATGGAAGAGAGGCTGGCCTCGAATTGAGAGAA
GACATTGAGACAGTCATAGAACCAAATATGGTAATCTCTATGGAGCCAAT
GGTAACAATTCCAGAAGGTTTGCCAGGAGCTGGTGGTTACAGAGAACATG
ATATTACAGTTGTTACTGAAGACGGTAATGAGAACATAACTAAATATCCA
TATGGACCTGAACATAATATAATCAGAAAATAAGTCTAGTGTTCAATATT
GTTGAATGATATATTGTgaattttaactttattttatGCACTTTCAAAGT
CGCAGTGAGTTTCTTCATACTCCGTCGTTCTACGAAGGGGACTTGTACTG
TAATGAAATTGACTTGGTTAAAAGATTTACCTaaccattaaaaaaaaaca
attaagacATTGGCTGTCACATTTCCCAATTCTGCAGATTCAAAAGAAAT
TGCgcattttttgtttatgtttatgtttataaCTTCAATTATGTACTATA
TTATATTATAAGCTCTATGAGCCTTacattttctaataaaaatgatatga
tttaaaaaataattaaaaaatctaCATCTACATTTTAAACTTTAtaaatt
tctatcaaattttattcaatttGACATGTTTAAGGTTGAATTTAGTTTTT
ACCTTGTTCATAG
Run BLAST on NCBI

protein sequence of TCONS_00049218-protein

>TCONS_00049218-protein ID=TCONS_00049218-protein|Name=TCONS_00049218-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MLAKAFSRRSLTKCFKKTNLECIRTLTGLKTPSQCVIQTPKDMPNLIDCR
QGERTPGLFTSEEMDSRLSTLRNKMSEMGMDAVVFTSYHNINYYSQFLYC
YFGRPYGLVITKDNISTISAGIDYGQPWRRGNNAESVTYTDWERDNFFKA
VKELVGNNQNVGLEYDHCHLQYFEKFQKALPEAKFADIGLPTMKLRMVKS
PEEIAVIRNGARIADLGGYAVREALEEEVPEHEVALHSTRTMIREIANTY
PQTDIMDTWTWFQSGINTDGAHNPVTTRKVNSGDILSLNCFPMIQGYYTA
LERTLFLNHASDAHIKVWEANVEVHERGLELIKPGVKCSEIAHELNEIFK
KHDLLKYRTFGYGHSFGSLCHYYGREAGLELREDIETVIEPNMVISMEPM
VTIPEGLPGAGGYREHDITVVTEDGNENITKYPYGPEHNIIRK
Run BLAST on NCBI

transcript from alignment at scaffold_154:287506..293035+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049218 ID=TCONS_00049218|Name=TCONS_00049218|organism=Clytia hemisphaerica|type=transcript|length=5530bp|location=Sequence derived from alignment at scaffold_154:287506..293035+ (Clytia hemisphaerica)
ttgaaaatatttcagagTATCTTTAATAAGAcaaagaaaatataaacaac CATGTTGGCAAAAGCATTTTCCAGAAGATCACTAACCAAATGCTTTAAAA AGACAAACTTAGAATGTATCCGGACCCTGACCGGCCTCAAAACGCCAAGC CAATGTGTCATACAAACACCAAAAGATATGCCGAATTTGATAGATTGCCG TCAAGGAGAAAggtaatattttttatttcttttaatcATGTATACATATC CAAATCTGTAATGTTGCACTCCCTACGATATCCACTAAAATGAAATTCAG AAATTCCTGATAATGTAAAAGTCTGAAAGGTTAGATTGCAGACAGATGTA ACTCATCCCAAGCAAATAAATTGAAGTCAATTCTTCAGCTGTAACTTGAG ATTTCGTGCAGATTGATTGTTTCGTGTAATTCAATTTTGAAGCACGTTAT AATAGGAGTTTTCGATAAACGGGACTCCTAGACTTTCTCCAAGCCTTTTT TTAAGAACCCCCCTCACTACTGAAAGGAAATCTTAATGACCACCTACATT TTACAGTTTTTTAGGGCACCCTCTTCCCTGAATGGGAAAAAAGCAGTCTC CTCATTAATAATATAAAGATTCGAATTTGATGGAGCTGACAGTTTGTCAC TTTCTTTTCTAGGACACCAGGTCTGTTCACATCAGAAGAGATGGACTCAC GTTTATCAACCCTCCGTAATAAAATGTCTGAAATGGGAATGGATGCAGTT GTGTTTACCTCATATCACAATATTAATTATTACAGTCAATTTTTGTATTG TTATTTTGGAAGACCTTATGGTTTAGTTATCACTAAAGATAATATTTCAA CTATCTCTGCTGGTAAGAATTTTTCTTTAGTCATTGGCCTCGTTTCCATG CATAGCGCACCGTAGGGTAGTTAAACATTCTCATTCAAATTCCTGATGAA ACCCAAAAAGAAGGATTGCAGATACGACTCCTCCCCAGGGAAACATTTCT TGGCGCTTTTCCAGGTTCTTTCTGAAGTTTTTTCCAGGCGTACcggtaaa ttattttttttctgcgtATAAATGCATAGACAAGTTGCAAAAACCTTGAA ACTGACCATCTAACAAGTTGTGTACCTAACAGAGTGTTGGTCTTTAATAA GAAGGCTATCCTAAGGTACTAAATTTACACCTATAATATAAGCCTTGCAG AAATTTCCTTAGTTCCTTAGTAGCTAATCCAGTTGAGCTTTACTAGCTTT CAAGCAGGTACACGTTTGTACACTTTCGTCTTTATAGAATATATTATAAC TTTAACATTATTGACCGACAatcttaacctcgctaataatACGACGAGGT AAAATTAAATTTCGAAATTATACCCTTGACCGGGTCAAAGCCAAGACGTG AAAGATAGAACTGACTAGTAATGGCTAGGATTAGGTATGTAGAgataatt ttcctcaaaattgaTTCTATAGGTATCGATTATGGTCAACCTTGGAGGCG CGGTAATAACGCTGAGAGCGTCACATACACGGACTGGGAACGAGATAACT TCTTCAAAGCAGTCAAAGAACTTGTGGGTAACAACCAAAATGTTGGTTTG GAGTATGACCATTGTCATTTACAATActttgaaaaattccaaaaggCACT TCCTGAAGCGAAATTTGCAGATATTGGATTACCCACAATGAAATTAAGGA TGGTGAAATCGCCGGAAGAAATTGCTGTGATCAGAAATGGTAAGATAATT CTTGTTAGCAATTGGTGATCATTTTATGTCATTTGTTGGAATTTCTGCAA CCTACGCTATGAAGATGATTTGATCGGTCGGAAGACGATTCACAAAACTT AGAAACTTATTCATTACATCTATCCGAAGACACGTGTTTCGTTCTGCCAG GAATTATTTATTAGCAAATGAGAAACACAAACATTCGGAAAAGAGAGATA TACTGGTTGTCCCAAAAAACTTTACATAAATTTGAATGCTGATATCTTAA GCCAGCATATCTTAAGGACCTTTTAGGGTCTCTTAGGAATTAATCCTTAC ACGTTTGTGTGAAATTTCAGGAACATTTGATATGTCAATCAAGAAAAATA GGTCAGCGAGTATTGCAAGGCCTAATATCAAACCggcaaagaaatgaaaa aaattgacgtcaatttgtagttttttaatcttaatttttttgggacACCC GGTAGAATAGAAGATAGGAAATGAAATAGGTGACTTTATGAGATACAACA ATACAACATCTTCCAACATAAGTATACACTAAAAAACACCTGCTTAGTTG GCTCACTTTTCTTTGTTATAACAGGTGCACGAATCGCTGACCTTGGCGGA TATGCCGTGCGTGAAGCATTGGAGGAAGAAGTACCTGAACACGAAGTTGC TTTACATTCAACAAGGACAATGATCAGAGAGATTGCAAACACATATCCAC AGACAGATATTATGGACAGTAAGTTatcattcatgatattcatgatgtaa tgtttcCTACGGAAACaacccggtttttgccagtggtggcaaatttaaac tagacaaaaatcGTTCAAAACTTGCCACTaatggcaaaaaccggggtctt tccgtaaaCAACATTAAGTcacgaatatcatgaattctaaGATTcttaaa ttcatgatattcataacgttatcttttatacggaaacacccgaaaatcac cgggcgtttgccactagttttgaatttttacattGAAACTGGTGGTGAac cataggcgtagcgagataccctgcaaaatttatggatgagagtgGTTTTT ACGACAATATAATTATTGTCTTtgatttatcaaaagataatgaatatgtc ataaaacGTCTGCattccctcataaattttgcagggtatctcgctacgcc tatgaacGCCCTGTGTTTTTCGTGTAATTCCGtgtaaaagattacgtcat gaatatcaagaatatacACCTGTCTACACGGGCGTTATTTTAAGAGTTTT CGCTAGCTGAGCTAAAAAAATAAGGAGAGACTGGTTCGAGTTTGACGTTA CTCAAGGAAGTTTCCCGTACTTAATGACACAAATTTCAtccacaaaacaa aaacaattaagaAAACTATGTACAGGTCCATAAGGGAAatatttctccaa tcttgtgtTAAACAAAGTGTAACTAAATAACCCAGTACATATTCTTTCTG TTATTTCTCAGAAAGGGAGCTGATTGAGGGTAAAATGAGGTGACACAGAG TCAGTTGCTCAAAATTCCttgtgcaaaacaaatcaaaatgggtgcaAGTC AAAAAAGATACAGTTatatcagatttttactgtcaaacTGCAATTCAGCA GTCCCTAAAACCCGCCCTTACAGTGTATTAAGTTAAAAACAGACCCTTGT AGTGCagtctatcaaaagtacacccttacagtgcatttcgagggtctcga aaaacctacccttaagggcggcgcatgccgtgggtcggaccatatgagtg cccccctccCGGAGTCTACTCTGACCCTGTCTAAAGAATAATCTTCTGAT TCTCATATAGCTTGGACATGGTTTCAATCAGGTATAAACACAGACGGAGC TCACAATCCAGTCACCACAAGAAAAGTCAACAGTGGAGATATTCTCAGTC TAAACTGCTTCCCAATGATACAAGGGTGAGTGCACAAAGACTTTTAAATG GTTTTTTGGTAGTCACTAGTTAATCTCTGAGTAGATCTTTTGCAGGGTTA ACGTCCCTATAAGTACAGTGAACTTCCTCTAATTCGAACATCTACAATTC GAACGTTTCGTTATTCGTATTAAAAAAGCGGCCCCTTCAGCTGGAAAGTC GTATAAAATAATtactgtaattcgaatcttctctaattcgaataagaTTT TCTGTCccttttaaaagtcaaattagTGAGAGTGGACTGTATTGCTCATC AAAAATAATGTGTTTTTaagaaattgtttaaaaaatccACTTACCTTATT AAGCTATGTGGTGATAAAGATTTGCTTTGTGACATAATTCTCAGAATGTA CGATTTCGAATGGTATCTGAAAACCAGAAGTAGATGATATCAATTAGAAT AATGTTAATGTCATTTTTACAGTTGAAAGAACACTAAAAATCTTTGAATC TAAAATCAAGAACCTAATTCTCACCCATTATAAACctgtttttgatttat ttttgaagagGTCTCCCAGCGGCACTACTCACCGCcatcatatcaatttt tttgcagTCATCACGATTACAAAAACCACTAGAATTTATCATCGCACAAA AAAATAGCAACAAAATAGTCCAATCACACATCACACCTCCAATTTTTAGC CCTCCTCATGCctaaatcttgatcacgccaccacacctaaaaattttgga tttacGCTATTCCCTAAAAAAATACCAATCAGGCAAATGGCCTGGTGGTC TCTTTGAATTATGTGGAAAGCCTCCTTATCCCAAATTATACTAATTcatg ttttaaagttttgctaCATTACACCTATTTTGAGAACTTAAAAATTCCTT CATTTTCAGGAAGGGGCGGCTTAACCTTACTTTTAGGCTATCGAAAAGGA GCCCATGAACAAACCTAAAACGAAAAATACATGACGTTCAAATTTGTCAT TTTAGATACTACACAGCGCTTGAGCGTACGTTATTTTTGAACCACGCGTC AGACGCGCACATCAAAGTCTGGGAAGCAAACGTTGAAGTCCACGAACGCG GGCTAGAACTTATCAAGCCTGGAGTCAAATGCTCTGAAATTGCACATGAG CTAAACGAAATCTTCAAGAAACATGATCTTTTGAAATACCGTACATTTGG ATATGGTCATTCTTTTGGAAGTTTGTGTCATTATTATGGAAGAGAGGCTG GCCTCGAATTGAGAGAAGACATTGAGACAGTCATAGAACCAAATATGGTA ATCTCTATGGAGCCAATGGTAACAATTCCAGAAGGTTTGCCAGGAGCTGG TGGTTACAGAGAACATGATATTACAGTTGTTACTGAAGACGGTAATGAGA ACATAACTAAATATCCATATGGACCTGAACATAATATAATCAGAAAATAA GTCTAGTGTTCAATATTGTTGAATGATATATTGTgaattttaactttatt ttatGCACTTTCAAAGTCGCAGTGAGTTTCTTCATACTCCGTCGTTCTAC GAAGGGGACTTGTACTGTAATGAAATTGACTTGGTTAAAAGATTTACCTa accattaaaaaaaaacaattaagacATTGGCTGTCACATTTCCCAATTCT GCAGATTCAAAAGAAATTGCgcattttttgtttatgtttatgtttataaC TTCAATTATGTACTATATTATATTATAAGCTCTATGAGCCTTacattttc taataaaaatgatatgatttaaaaaataattaaaaaatctaCATCTACAT TTTAAACTTTAtaaatttctatcaaattttattcaatttGACATGTTTAA GGTTGAATTTAGTTTTTACCTTGTTCATAG

Coding sequence (CDS) from alignment at scaffold_154:287506..293035+

>TCONS_00049218 ID=TCONS_00049218|Name=TCONS_00049218|organism=Clytia hemisphaerica|type=CDS|length=7992bp|location=Sequence derived from alignment at scaffold_154:287506..293035+ (Clytia hemisphaerica)
ATGTTGGCAAAAGCATTTTCCAGAAGATCACTAACCAAATGCTTTAAAAA
GACAAACTTAGAATGTATCCGGACCCTGACCGGCCTCAAAACGCCAAGCC
AATGTGTCATACAAACACCAAAAGATATGCCGAATTTGATAGATTGCCGT
CAAGGAGAAAgGACACCAGGTCTGTTCACATCAGAAGAGATGGACTCACG
TTTATCAACCCTCCGTAATAAAATGTCTGAAATGGGAATGGATGCAGTTG
TGTTTACCTCATATCACAATATTAATTATTACAGTCAATTTTTGTATTGT
TATTTTGGAAGACCTTATGGTTTAGTTATCACTAAAGATAATATTTCAAC
TATCTCTGCTGGTATCGATTATGGTCAACCTTGGAGGCGCGGTAATAACG
CTGAGAGCGTCACATACACGGACTGGGAACGAGATAACTTCTTCAAAGCA
GTCAAAGAACTTGTGGGTAACAACCAAAATGTTGGTTTGGAGTATGACCA
TTGTCATTTACAATActttgaaaaattccaaaaggCACTTCCTGAAGCGA
AATTTGCAGATATTGGATTACCCACAATGAAATTAAGGATGGTGAAATCG
CCGGAAGAAATTGCTGTGATCAGAAATGGTGCACGAATCGCTGACCTTGG
CGGATATGCCGTGCGTGAAGCATTGGAGGAAGAAGTACCTGAACACGAAG
TTGCTTTACATTCAACAAGGACAATGATCAGAGAGATTGCAAACACATAT
CCACAGACAGATATTATGGACACTTGGACATGGTTTCAATCAGGTATAAA
CACAGACGGAGCTCACAATCCAGTCACCACAAGAAAAGTCAACAGTGGAG
ATATTCTCAGTCTAAACTGCTTCCCAATGATACAAGGATACTACACAGCG
CTTGAGCGTACGTTATTTTTGAACCACGCGTCAGACGCGCACATCAAAGT
CTGGGAAGCAAACGTTGAAGTCCACGAACGCGGGCTAGAACTTATCAAGC
CTGGAGTCAAATGCTCTGAAATTGCACATGAGCTAAACGAAATCTTCAAG
AAACATGATCTTTTGAAATACCGTACATTTGGATATGGTCATTCTTTTGG
AAGTTTGTGTCATTATTATGGAAGAGAGGCTGGCCTCGAATTGAGAGAAG
ACATTGAGACAGTCATAGAACCAAATATGGTAATCTCTATGGAGCCAATG
GTAACAATTCCAGAAGGTTTGCCAGGAGCTGGTGGTTACAGAGAACATGA
TATTACAGTTGTTACTGAAGACGGTAATGAGAACATAACTAAATATCCAT
ATGGACCTGAACATAATATAATCAGAAAATAAATGTTGGCAAAAGCATTT
TCCAGAAGATCACTAACCAAATGCTTTAAAAAGACAAACTTAGAATGTAT
CCGGACCCTGACCGGCCTCAAAACGCCAAGCCAATGTGTCATACAAACAC
CAAAAGATATGCCGAATTTGATAGATTGCCGTCAAGGAGAAAgGACACCA
GGTCTGTTCACATCAGAAGAGATGGACTCACGTTTATCAACCCTCCGTAA
TAAAATGTCTGAAATGGGAATGGATGCAGTTGTGTTTACCTCATATCACA
ATATTAATTATTACAGTCAATTTTTGTATTGTTATTTTGGAAGACCTTAT
GGTTTAGTTATCACTAAAGATAATATTTCAACTATCTCTGCTGGTATCGA
TTATGGTCAACCTTGGAGGCGCGGTAATAACGCTGAGAGCGTCACATACA
CGGACTGGGAACGAGATAACTTCTTCAAAGCAGTCAAAGAACTTGTGGGT
AACAACCAAAATGTTGGTTTGGAGTATGACCATTGTCATTTACAATActt
tgaaaaattccaaaaggCACTTCCTGAAGCGAAATTTGCAGATATTGGAT
TACCCACAATGAAATTAAGGATGGTGAAATCGCCGGAAGAAATTGCTGTG
ATCAGAAATGGTGCACGAATCGCTGACCTTGGCGGATATGCCGTGCGTGA
AGCATTGGAGGAAGAAGTACCTGAACACGAAGTTGCTTTACATTCAACAA
GGACAATGATCAGAGAGATTGCAAACACATATCCACAGACAGATATTATG
GACACTTGGACATGGTTTCAATCAGGTATAAACACAGACGGAGCTCACAA
TCCAGTCACCACAAGAAAAGTCAACAGTGGAGATATTCTCAGTCTAAACT
GCTTCCCAATGATACAAGGATACTACACAGCGCTTGAGCGTACGTTATTT
TTGAACCACGCGTCAGACGCGCACATCAAAGTCTGGGAAGCAAACGTTGA
AGTCCACGAACGCGGGCTAGAACTTATCAAGCCTGGAGTCAAATGCTCTG
AAATTGCACATGAGCTAAACGAAATCTTCAAGAAACATGATCTTTTGAAA
TACCGTACATTTGGATATGGTCATTCTTTTGGAAGTTTGTGTCATTATTA
TGGAAGAGAGGCTGGCCTCGAATTGAGAGAAGACATTGAGACAGTCATAG
AACCAAATATGGTAATCTCTATGGAGCCAATGGTAACAATTCCAGAAGGT
TTGCCAGGAGCTGGTGGTTACAGAGAACATGATATTACAGTTGTTACTGA
AGACGGTAATGAGAACATAACTAAATATCCATATGGACCTGAACATAATA
TAATCAGAAAATAAATGTTGGCAAAAGCATTTTCCAGAAGATCACTAACC
AAATGCTTTAAAAAGACAAACTTAGAATGTATCCGGACCCTGACCGGCCT
CAAAACGCCAAGCCAATGTGTCATACAAACACCAAAAGATATGCCGAATT
TGATAGATTGCCGTCAAGGAGAAAgGACACCAGGTCTGTTCACATCAGAA
GAGATGGACTCACGTTTATCAACCCTCCGTAATAAAATGTCTGAAATGGG
AATGGATGCAGTTGTGTTTACCTCATATCACAATATTAATTATTACAGTC
AATTTTTGTATTGTTATTTTGGAAGACCTTATGGTTTAGTTATCACTAAA
GATAATATTTCAACTATCTCTGCTGGTATCGATTATGGTCAACCTTGGAG
GCGCGGTAATAACGCTGAGAGCGTCACATACACGGACTGGGAACGAGATA
ACTTCTTCAAAGCAGTCAAAGAACTTGTGGGTAACAACCAAAATGTTGGT
TTGGAGTATGACCATTGTCATTTACAATActttgaaaaattccaaaaggC
ACTTCCTGAAGCGAAATTTGCAGATATTGGATTACCCACAATGAAATTAA
GGATGGTGAAATCGCCGGAAGAAATTGCTGTGATCAGAAATGGTGCACGA
ATCGCTGACCTTGGCGGATATGCCGTGCGTGAAGCATTGGAGGAAGAAGT
ACCTGAACACGAAGTTGCTTTACATTCAACAAGGACAATGATCAGAGAGA
TTGCAAACACATATCCACAGACAGATATTATGGACACTTGGACATGGTTT
CAATCAGGTATAAACACAGACGGAGCTCACAATCCAGTCACCACAAGAAA
AGTCAACAGTGGAGATATTCTCAGTCTAAACTGCTTCCCAATGATACAAG
GATACTACACAGCGCTTGAGCGTACGTTATTTTTGAACCACGCGTCAGAC
GCGCACATCAAAGTCTGGGAAGCAAACGTTGAAGTCCACGAACGCGGGCT
AGAACTTATCAAGCCTGGAGTCAAATGCTCTGAAATTGCACATGAGCTAA
ACGAAATCTTCAAGAAACATGATCTTTTGAAATACCGTACATTTGGATAT
GGTCATTCTTTTGGAAGTTTGTGTCATTATTATGGAAGAGAGGCTGGCCT
CGAATTGAGAGAAGACATTGAGACAGTCATAGAACCAAATATGGTAATCT
CTATGGAGCCAATGGTAACAATTCCAGAAGGTTTGCCAGGAGCTGGTGGT
TACAGAGAACATGATATTACAGTTGTTACTGAAGACGGTAATGAGAACAT
AACTAAATATCCATATGGACCTGAACATAATATAATCAGAAAATAAATGT
TGGCAAAAGCATTTTCCAGAAGATCACTAACCAAATGCTTTAAAAAGACA
AACTTAGAATGTATCCGGACCCTGACCGGCCTCAAAACGCCAAGCCAATG
TGTCATACAAACACCAAAAGATATGCCGAATTTGATAGATTGCCGTCAAG
GAGAAAgGACACCAGGTCTGTTCACATCAGAAGAGATGGACTCACGTTTA
TCAACCCTCCGTAATAAAATGTCTGAAATGGGAATGGATGCAGTTGTGTT
TACCTCATATCACAATATTAATTATTACAGTCAATTTTTGTATTGTTATT
TTGGAAGACCTTATGGTTTAGTTATCACTAAAGATAATATTTCAACTATC
TCTGCTGGTATCGATTATGGTCAACCTTGGAGGCGCGGTAATAACGCTGA
GAGCGTCACATACACGGACTGGGAACGAGATAACTTCTTCAAAGCAGTCA
AAGAACTTGTGGGTAACAACCAAAATGTTGGTTTGGAGTATGACCATTGT
CATTTACAATActttgaaaaattccaaaaggCACTTCCTGAAGCGAAATT
TGCAGATATTGGATTACCCACAATGAAATTAAGGATGGTGAAATCGCCGG
AAGAAATTGCTGTGATCAGAAATGGTGCACGAATCGCTGACCTTGGCGGA
TATGCCGTGCGTGAAGCATTGGAGGAAGAAGTACCTGAACACGAAGTTGC
TTTACATTCAACAAGGACAATGATCAGAGAGATTGCAAACACATATCCAC
AGACAGATATTATGGACACTTGGACATGGTTTCAATCAGGTATAAACACA
GACGGAGCTCACAATCCAGTCACCACAAGAAAAGTCAACAGTGGAGATAT
TCTCAGTCTAAACTGCTTCCCAATGATACAAGGATACTACACAGCGCTTG
AGCGTACGTTATTTTTGAACCACGCGTCAGACGCGCACATCAAAGTCTGG
GAAGCAAACGTTGAAGTCCACGAACGCGGGCTAGAACTTATCAAGCCTGG
AGTCAAATGCTCTGAAATTGCACATGAGCTAAACGAAATCTTCAAGAAAC
ATGATCTTTTGAAATACCGTACATTTGGATATGGTCATTCTTTTGGAAGT
TTGTGTCATTATTATGGAAGAGAGGCTGGCCTCGAATTGAGAGAAGACAT
TGAGACAGTCATAGAACCAAATATGGTAATCTCTATGGAGCCAATGGTAA
CAATTCCAGAAGGTTTGCCAGGAGCTGGTGGTTACAGAGAACATGATATT
ACAGTTGTTACTGAAGACGGTAATGAGAACATAACTAAATATCCATATGG
ACCTGAACATAATATAATCAGAAAATAAATGTTGGCAAAAGCATTTTCCA
GAAGATCACTAACCAAATGCTTTAAAAAGACAAACTTAGAATGTATCCGG
ACCCTGACCGGCCTCAAAACGCCAAGCCAATGTGTCATACAAACACCAAA
AGATATGCCGAATTTGATAGATTGCCGTCAAGGAGAAAgGACACCAGGTC
TGTTCACATCAGAAGAGATGGACTCACGTTTATCAACCCTCCGTAATAAA
ATGTCTGAAATGGGAATGGATGCAGTTGTGTTTACCTCATATCACAATAT
TAATTATTACAGTCAATTTTTGTATTGTTATTTTGGAAGACCTTATGGTT
TAGTTATCACTAAAGATAATATTTCAACTATCTCTGCTGGTATCGATTAT
GGTCAACCTTGGAGGCGCGGTAATAACGCTGAGAGCGTCACATACACGGA
CTGGGAACGAGATAACTTCTTCAAAGCAGTCAAAGAACTTGTGGGTAACA
ACCAAAATGTTGGTTTGGAGTATGACCATTGTCATTTACAATActttgaa
aaattccaaaaggCACTTCCTGAAGCGAAATTTGCAGATATTGGATTACC
CACAATGAAATTAAGGATGGTGAAATCGCCGGAAGAAATTGCTGTGATCA
GAAATGGTGCACGAATCGCTGACCTTGGCGGATATGCCGTGCGTGAAGCA
TTGGAGGAAGAAGTACCTGAACACGAAGTTGCTTTACATTCAACAAGGAC
AATGATCAGAGAGATTGCAAACACATATCCACAGACAGATATTATGGACA
CTTGGACATGGTTTCAATCAGGTATAAACACAGACGGAGCTCACAATCCA
GTCACCACAAGAAAAGTCAACAGTGGAGATATTCTCAGTCTAAACTGCTT
CCCAATGATACAAGGATACTACACAGCGCTTGAGCGTACGTTATTTTTGA
ACCACGCGTCAGACGCGCACATCAAAGTCTGGGAAGCAAACGTTGAAGTC
CACGAACGCGGGCTAGAACTTATCAAGCCTGGAGTCAAATGCTCTGAAAT
TGCACATGAGCTAAACGAAATCTTCAAGAAACATGATCTTTTGAAATACC
GTACATTTGGATATGGTCATTCTTTTGGAAGTTTGTGTCATTATTATGGA
AGAGAGGCTGGCCTCGAATTGAGAGAAGACATTGAGACAGTCATAGAACC
AAATATGGTAATCTCTATGGAGCCAATGGTAACAATTCCAGAAGGTTTGC
CAGGAGCTGGTGGTTACAGAGAACATGATATTACAGTTGTTACTGAAGAC
GGTAATGAGAACATAACTAAATATCCATATGGACCTGAACATAATATAAT
CAGAAAATAAATGTTGGCAAAAGCATTTTCCAGAAGATCACTAACCAAAT
GCTTTAAAAAGACAAACTTAGAATGTATCCGGACCCTGACCGGCCTCAAA
ACGCCAAGCCAATGTGTCATACAAACACCAAAAGATATGCCGAATTTGAT
AGATTGCCGTCAAGGAGAAAgGACACCAGGTCTGTTCACATCAGAAGAGA
TGGACTCACGTTTATCAACCCTCCGTAATAAAATGTCTGAAATGGGAATG
GATGCAGTTGTGTTTACCTCATATCACAATATTAATTATTACAGTCAATT
TTTGTATTGTTATTTTGGAAGACCTTATGGTTTAGTTATCACTAAAGATA
ATATTTCAACTATCTCTGCTGGTATCGATTATGGTCAACCTTGGAGGCGC
GGTAATAACGCTGAGAGCGTCACATACACGGACTGGGAACGAGATAACTT
CTTCAAAGCAGTCAAAGAACTTGTGGGTAACAACCAAAATGTTGGTTTGG
AGTATGACCATTGTCATTTACAATActttgaaaaattccaaaaggCACTT
CCTGAAGCGAAATTTGCAGATATTGGATTACCCACAATGAAATTAAGGAT
GGTGAAATCGCCGGAAGAAATTGCTGTGATCAGAAATGGTGCACGAATCG
CTGACCTTGGCGGATATGCCGTGCGTGAAGCATTGGAGGAAGAAGTACCT
GAACACGAAGTTGCTTTACATTCAACAAGGACAATGATCAGAGAGATTGC
AAACACATATCCACAGACAGATATTATGGACACTTGGACATGGTTTCAAT
CAGGTATAAACACAGACGGAGCTCACAATCCAGTCACCACAAGAAAAGTC
AACAGTGGAGATATTCTCAGTCTAAACTGCTTCCCAATGATACAAGGATA
CTACACAGCGCTTGAGCGTACGTTATTTTTGAACCACGCGTCAGACGCGC
ACATCAAAGTCTGGGAAGCAAACGTTGAAGTCCACGAACGCGGGCTAGAA
CTTATCAAGCCTGGAGTCAAATGCTCTGAAATTGCACATGAGCTAAACGA
AATCTTCAAGAAACATGATCTTTTGAAATACCGTACATTTGGATATGGTC
ATTCTTTTGGAAGTTTGTGTCATTATTATGGAAGAGAGGCTGGCCTCGAA
TTGAGAGAAGACATTGAGACAGTCATAGAACCAAATATGGTAATCTCTAT
GGAGCCAATGGTAACAATTCCAGAAGGTTTGCCAGGAGCTGGTGGTTACA
GAGAACATGATATTACAGTTGTTACTGAAGACGGTAATGAGAACATAACT
AAATATCCATATGGACCTGAACATAATATAATCAGAAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031252XLOC_031252Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049218-proteinTCONS_00049218-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049218-exon-scaffold_154-1491911889:287506..287717TCONS_00049218-exon-scaffold_154-1491911889:287506..287717Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1510915933:287506..287717TCONS_00049218-exon-scaffold_154-1510915933:287506..287717Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1575043694:287506..287717TCONS_00049218-exon-scaffold_154-1575043694:287506..287717Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1491911889:288168..288367TCONS_00049218-exon-scaffold_154-1491911889:288168..288367Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1510915933:288168..288367TCONS_00049218-exon-scaffold_154-1510915933:288168..288367Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1575043694:288168..288367TCONS_00049218-exon-scaffold_154-1575043694:288168..288367Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1491911889:288978..289244TCONS_00049218-exon-scaffold_154-1491911889:288978..289244Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1510915933:288978..289244TCONS_00049218-exon-scaffold_154-1510915933:288978..289244Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1575043694:288978..289244TCONS_00049218-exon-scaffold_154-1575043694:288978..289244Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1491911889:289830..289973TCONS_00049218-exon-scaffold_154-1491911889:289830..289973Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1510915933:289830..289973TCONS_00049218-exon-scaffold_154-1510915933:289830..289973Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1575043694:289830..289973TCONS_00049218-exon-scaffold_154-1575043694:289830..289973Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1491911889:291066..291180TCONS_00049218-exon-scaffold_154-1491911889:291066..291180Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1510915933:291066..291180TCONS_00049218-exon-scaffold_154-1510915933:291066..291180Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1575043694:291066..291180TCONS_00049218-exon-scaffold_154-1575043694:291066..291180Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1491911889:292161..293035TCONS_00049218-exon-scaffold_154-1491911889:292161..293035Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1510915933:292161..293035TCONS_00049218-exon-scaffold_154-1510915933:292161..293035Clytia hemisphaericaexon
TCONS_00049218-exon-scaffold_154-1575043694:292161..293035TCONS_00049218-exon-scaffold_154-1575043694:292161..293035Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:287506..293035 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.199065 0.0862753 0.525913 0.416519 0.0596555 0.0471406 7.22289 6.52238 6.31851 6.04879 4.23526 4.31608 0.220653 1.46656 27.8318 1.37478 50.958 2.34858 0.305659 0.270642 196.145 206.909 29.4941 48.741 39.8244 18.3116 22.8981 15.9572 26.8081 9.97984
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000994Pept_M24
IPR000587Creatinase_N
IPR029149Creatin/AminoP/Spt16_NTD
IPR028980Creatinase/Aminopeptidase_P_N
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049218 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top