TCONS_00049177 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049177
Unique NameTCONS_00049177
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3568

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049177 ID=TCONS_00049177|Name=TCONS_00049177|organism=Clytia hemisphaerica|type=transcript|length=3568bp
ACCCAATTCTTGATTATCATGAAAATAGAATGAAGAAGGAAAAACCTGTG
GTATCACGCCCACCTATTCATCCAGGTGCCAGAAATCCTCAAGAAGCCgA
ATATTTGCGACAGTTGGAACAGATTCGTAAACAGAATTACAAGGATCGTC
AAATCATGCGAGGGAATACCCCTTCAGTGGATCGACCTTCTTCCAACAAT
AAAGTTTCGGTTGCAGGAGATCCAAAGGTCGATCCTGATGCCAGAAGAAG
GAAGATTCAAGAATTGAAGGAACAAGCGGACCGTCGAGCAGCCATGCTTA
AAGAGCAATTGGAAAAGAGACGCcaacaaattgaaaaacaagTAGAAAAA
GACAGAATGGAGAGAATGAAAAAGTGGAGACAAGAGCGAGAGAACTGTCG
CGCCTCTCCAACGCCCCAAGTTTACCAACCACCAAAGAGGGAGGACAATA
AAAAAGaagaaaagaaagagatTGCCGTTCCGTCAATTGGTATGGAAACG
GCAATGAGGGAGGTTGGTCAACCCAAACTTTTCAGATCCTTGTCAGAGGG
TGAAATTCACAACTTGGTAAAACCACAGAAGCGAGAAAATATTCGTCGAA
AAGCATGGGGAGCAGCCGATAAAAATGCTATCCCATCGTTTGCAAATATT
CCACTTGAAATCACTGCATCAGCTATGGAAGCGACCCGCGTAATCGAACC
AACCATCAAAAACGAAGTCGAGCAAAGTTTTGTAAATCAAGACAAGAACG
AACCGAGAAAAGGTTGGGATAATCAAGGCAAAACGCAATTCGTTTCCAAA
CTCCATGATATGGATCTACTCGGAACACAAATACCAACTATGACCATTAA
TAATATTGATTCTAAGGATGTCCCGAAACCAGGACAAACAATTACTATAG
AAAATAAAAGGGACGTAGCTAAACCAGGAGAGACAATAATCTTGAACAAG
GACATTCCGAAACAAGGCGAAACTATAACGCTTGAACACTCAGCGAACAA
AAGCAGTATACCAAACATTGGAGGAAATAGTAACAAAACCATTGTTTTAT
CAGTTGATAAAAATGATGTAGAAAACTCTAAACGTGGTGAAGTTTCTCCA
ATTAGACAAGAAAAGACATTGAACAACGAAAACCAAGACGGCTCAACAGA
TTCGAAGAAACTGCAAAAATTATCTTCTaatgaaaacaaagaacaaGAGC
CAACATCACAATCAGCCAATGAAAAGCTAGAAGTGACGCAATCAACCAAT
CAGGGGTCCGAGAAAGAAAAGTTCGAAGTAGACGATCTTGAAGTGATTGA
GATTTCTGATAACAAGGTTGAGACAGAAGTTTCTGTTGAAGATAAAACGA
ATGAAAAGACTGTCAAAAATGCTTGGTCTGATGGAGTTTCTCAAAAACCT
CCCGAATCGACTCCAGAGAAGCTTTCAAATATTGAAGTGAACAAATCACC
AACTGACACGCAATCAAGACACGAAACAAGTGGAGACAGTATTGTTGAAA
TGTCTGAGGAAGAGTGTTCGTTCCATACGCCAAATCGATCATTTGGATTA
CAAAGTGGAAGTTACGatatcaaagaaaaaaagTTACTACGAACATGTTC
GTTACCAGACCTCCGACCAGCAGCccttgatgacgtcatagaagAAGATG
AGGAAAACTCCGAAGAACATGCCAGTGATAAACAAGAGTCTGAGGTAAAA
GATGTTAAAGAAGAAGATaacgaaaatgaagatgaaaaggatGAGagcaa
tgaagatgaagaagaagttTCTGATGCTGAAGCGGACGCAGACGATGATG
ACGAATTTGATGATTATGAAAGCATGTTGGAATCCATGAGAAATGTCCTT
GGTAAAACTGCAGTGACACTGGAGAATGGGCAAGCGAACGAACAAGAGAA
CaatgaagaagatgaagatgaagatgatgaaTGGGAAGAAGAAAGAGATG
ATGAAGATGtatcaaataaaaatcaaaagaatgtGCTCCAAACAAATGGA
GGTGATCGAGAAAATCTGTTTTCACGAATCGAGGAATCAAGAATGGCTTT
AGAAAATGAGTTGGGAATGGATCTTTTTATCAAGGTGTACCGACATGTAC
AGATGATGCAAGATAACGAAGATGATGAACTTGAGATGGGCACAACCGAA
ATCTCTCAACTACTCGGTGATAAAGAAAATCTGTACCAAAAAATACTTTA
TCTTGTCATCGCTGACTCAGCATATTCTGAAGGAAATGATGGCACATTTT
GAAACGTAAGAACGTAACGTTGAGGTGAAACAGAGATATTGGCATTTTAA
AACCTAGTGGTAAGAATCGCAAATCATCAAACGTGACAGCTAAAGTTGTT
ACAGCAATGATTATTTTGTTAACAAAACAAAtggaatcaaaaatcaaaaa
taattatttaaccaaaacaaaatttttttttataagctaCATATATGATA
ATTAACAAGCAACcaattatagattttttttaattttcctggTACTCTTT
ACggaatttcaaaatcaatacAGTTGAACTCGTGTAATTCGAACccctat
aattcgaacccatgtaattcgaaaaatcattcaaatcgaacaaattttca
ggtctcatcaagaaattttaatcatgtaattcgaattttcgatttttttg
attgaCGAGGAGATTTCCAAGAATCGAGAGCAGAAAATGAAACGATCGAC
AATCAAAgacttctttgaaaaattatgaattgacttttaaatttcaaaac
atatgTCAAGATTATTTATACTAGTATTTCATTATTCTAGCTcgaaaaca
caaaaaatgttcaaaatcgAATCAGGTCAAAATATGAAAACTCGTTCGAA
ACTCATGTAATTGGAACAAAATTTTTGTCCCTGGAGAATTagaattacat
gagttcaacgaataagatttttgaaacttttggccaacagatcaaatttt
ccaggaaggctatgcctgggaaacagatgtttaaaaaaaggtcctcgctG
GATGCTTTCGGACATCAGTAAACTGACGTTAGCCATAACGTTTAGACGAC
GGGAaagtttttgcaattttgagtgaataaaagtgattttttcatcCACT
GCCACTTGCAGCACTTCTTGAATTTACTGTTAGACATGGATGTTGAGTGA
ACGTTATCAGAATAAAAAAACACACTAAGGGACTCTGAGGACTTTGAGCT
TGTGATGTTTTTACGTCAGTTTGAAAATAATAGATTATGAAAtaactgtt
ttcaaaatatcttgTTCCTGATAAAATAGTATTGCCCTTGGTACCATCTT
TagtgttttttaactcgaaccAAATCGGATAGATATCATAAGATTTTATC
GACAACTGTCGAAAGCGTATGTTCCCTGGTACCTAACGAggaacaaagaa
acaaaaatgtttATACGAATGTGGAGATTTCTCTGTAAATATGTGTTTTT
GATTGTATAATGATGTGATTTTTTGCTTTATATCTTACGATATGTTTATT
TTAGTACATAAAATATGatgaaaatagttttaaatttATTATAAAAGAAA
GCTTCAAATGACCTCTAA
Run BLAST on NCBI

transcript from alignment at scaffold_153:188152..201259+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049177 ID=TCONS_00049177|Name=TCONS_00049177|organism=Clytia hemisphaerica|type=transcript|length=13108bp|location=Sequence derived from alignment at scaffold_153:188152..201259+ (Clytia hemisphaerica)
ACCCAATTCTTGATTATCATGAAAATAGAAGTAAGTATAATATtgcttta
atcggattaattttcacgaaattcgATTTTGcgttttcgcgaaaataaac
tCGCTTAATCGCCTgagattcgcgaaattaaatccacgcgaaacttttga
tattgattttcagccttaatactattttgacaaaaaatggcgTTTTAGGg
aaattttcaacttatttTTGGCTGAGTAGCCTGGATTAGCGATTCATTTT
TCaaggtatccacacatttcatTGTCATGTCACTGACTATTGGCAATATC
TATTTCACCAAATAAGTCGAAGTTAGTTATTACCCTTTAGTAACAAACAC
CTTTTTTAGTGAAGAAGGAAAAACCTGTGGTATCACGCCCACCTATTCAT
CCAGGTGCCAGAAATCCTCAAGAAGCCGTGAGTTCAATTTTTCGCTGATT
AACTTCGTCTAGCTTTGAAATAGTCCAGATTTATCGGAGATCGCAACTGA
TTTAGTCCATAATGTTATTTGAATAAGTAATATAGCAAAATTTCTCGGTA
GACTTTGAaggatatttttcttgttttgaaaaggAATATTTGCGACAGTT
GGAACAGATTCGTAAACAGAATTACAAGGATCGTCAAATCATGCGAGGGA
ATACCCCTTCAGTGGATCGACCTTCTTCCAACAATAAAGTTTCGGTTGCA
GGAGATCCAAAGGTCGATCCTGATGCCAGAAGAAGGAAGATTCAAGAATT
GAAGGTGAATAGGCTTACCAAACTGCTGCTCAAAGTCTTGTTTTGAACTA
GTTATCATATGTCGACTTTCATCTCTTACCTCGAACAATAataaatgcta
aaaaattaaattgctTCAAAGGGAAATTGCTCTACCTTTAGGAACGAATA
CCATTACAATATTTANacaggaattgtgttttaatatcctttactgaatt
cttatagtgatatgtttgtaaaaaatctgtgtcgggtttgaaaaatcaaa
aggaacggtcgccccagccaatgaaattacgacaaagtccaaaacaatca
ttttcagccataacactgtgaaaatttctccaatcttgttcagatttaca
caggaattgtgttttagtatcctttactgaattcttatagtgatatgttt
gtaaaaaatctgtgtcgggtttgaaaaatcaaaaggaacggttgcCAGCC
ACGATGAatttacgacaaagtccaaaacgatcattttcagccataacact
gtgaaaatttctccaatcttgttcaaatttccaCAGGatttgtgttttag
tatcctttactgaattctcatagtgatatgtttgtaaaaaatctgtgttg
ggtttgaaaaatcaaaaggaacggtcaccAGTCGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNatcattttcagccataacactatgaagatttctccaat
cttgttcaaatttacacaggaattgtgttttagtatcatttattgaattc
tcatagtgatatgtttgtaaaaaatctatgtcgggtttgaaaaatcaaaa
ggaacggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaa
aatgtcttgaccgtcgtcgtcggacgagagagaatttaaggctcctaggc
cggagcaaaaagGTAAGGTAATTAACTCTCCGTATGATATTTTGCCCTAT
TTTTGCTTCACTGGGTTGTTTTGTTTGTATCCTTTGAAACAAGTAAGTGA
GTATAATAATTCTCAATTCTCTCAAATTTAGAACCCAATTCTTGATTATC
ATGAAAATAGAAGTAAGTATAATATtgctttaatcggattaattttcacg
aaattcgATTTTGcgttttcgcgaaaataaactCGCTTAATCGCCTgaga
ttcgcgaaattaaatccacgcgaaacttttgatattgattttcagcctta
atactattttgacaaaaaatggcgTTTTAGGgaaattttcaacttatttT
TGGCTGAGTAGCCTGGATTAGCGATTCATTTTTCaaggtatccacacatt
tcatTGTCATGTCACTGACTATTGGCAATATCTATTTCACCAAATAAGTC
GAAGTTAGTTATTACCCTTTAGTAACAAACACCTTTTTTAGTGAAGAAGG
AAAAACCTGTGGTATCACGCCCACCTATTCATCCAGGTGCCAGAAATCCT
CAAGAAGCCGTGAGTTCAATTTTTCGCTGATTAACTTCGTCTAGCTTTGA
AATAGTCCAGATTTATCGGAGATCGCAACTGATTTAGTCCATAATGTTAT
TTGAATAAGTAATATAGCAAAATTTCTCGGTAGACTTTGAaggatatttt
tcttgttttgaaaaggAATATTTGCGACAGTTGGAACAGATTCGTAAACA
GAATTACAAGGATCGTCAAATCATGCGAGGGAATACCCCTTCAGTGGATC
GACCTTCTTCCAACAATAAAGTTTCGGTTGCAGGAGATCCAAAGGTCGAT
CCTGATGCCAGAAGAAGGAAGATTCAAGAATTGAAGGTGAATAGGCTTAC
CAAACTGCTGCTCAAAGTCTTGTTTTGAACTAGTTATCATATGTCGACTT
TCATCTCTTACCTCGAACAATAataaatgctaaaaaattaaattgctTCA
AAGGGAAATTGCTCTACCTTTAGGAACGAATACCATTACAATATTTAGTA
GTTGTTTCCAGAGACTAGAGAATAACACTTTTATATTTCGATTATTTTTT
GTTAGGAACAAGCGGACCGTCGAGCAGCCATGCTTAAAGAGCAATTGGAA
AAGAGACGCcaacaaattgaaaaacaagTAGAAAAAGACAGAATGGAGAG
AATGGTTTGTTTTTCACTTACCTTTTCCGGATCTCAAAGTTCTTCGATTT
TAAGTTTTAGAGTCAAGGTTTCATTGACTTGACAAAGGCACAATTTCCTt
taaacatatttatttttttgcttttctaGAAAAAGTGGAGACAAGAGCGA
GAGAAGTAAGTCTTTTCGCATTCACTCTAATAGATGCTAGATATTATTTG
AATATTCAGAGCCGTTCCGAAAAAATTTAACAACGAGTCTGGACCCTCCA
TTGATGCTATCAAATGATGCATacacacacccccttctcacaggcccggt
aggattttttcggccagtggggatgaaaataacgAACTGGATGCACTCAC
GGCTTTCTTCTTTCAAATCTTACAACGttaacattttttctgtttcagCT
GTCGCGCCTCTCCAACGCCCCAAGTTTACCAACCACCAAAGAGGGAGGAC
AATAAAAAAGgtttgaaaacttttggttCAAGCGAAATgtactacacatt
tttttttgtttttttaagaaacacacttttaagaaacatgaggtttagaa
tgcctaaaaactaagaaacatgctaagactgagaatgagaaaataacatt
ttttaattaggtttttttttaagaaccttccaatccagtcttccatgagg
ctgattatgtcaagtttagaaacatgtaagaaacatttaaggctcaaaag
gtcgatttcttaagaaacattgaggctgcttggtaaaactagtttcttaa
aaaaaacgtgaaatTTGTTTAGATATTTTTACTTGGATTCATTTTTTGGT
TTGTGCAGTTGGCTAAAACGCGAAAATCACTAATATCCGAAGATTttatg
tttttccattttttcttttagaagaaaagaaagagatTGCCGTTCCGTCA
ATTGGTATGGAAACGGCAATGAGGGAGGTTGGTCAACCCAAACTTTTCAG
ATCCTTGTCAGAGGTAATATAACTTCCATGTTGTACTGAAGTCTATCCGA
AGGTCACAATCAATCAATTTAGCCCCTTTTTTTTCTTAGTCCTTTTATGT
CGTACATAAGTCTATCGCTCTatgaaattcaatttcattttgaaatgaat
ttaagtcATGCCGGTGAAATAGCTCTTCAAAATCCTTTTTAATAGGGTGA
AATTCACAACTTGGTAAAACCACAGAAGCGAGAAAATATTCGTCGAAAAG
CATGGGGAGCAGCCGATAAAAATGCTATCCCATCGTTTGCAAATATTCCA
CTTGAAATCACTGCATCAGCTATGGAAGGTAAATCAATAAACTACCCTCC
ACGTGGCGAGTAGaaacaaaaagcaaaaagtgTCGTGGGCTTGAAAAAAT
CACTATAGCATGTTTAATGTTTGGTGTGAGAATTTTGCTGGAGAATTCAC
CTTTAAAATCaccgtattataatatagacgTGAGCTCCCTGTATACTGAC
CTAACTCTGGACTAAACACTTTGTTCAGGTAGGGATCGAGAAGAGAGTTG
GTTTTCGTTCTCATCTTGATATCATTATACTTTCATTGGTCAAGATAAAG
AGCTAGAGTCTAATTCCAGGGGGggtcgaaatttggtcaaaattgatcaa
atttgttccgctaagggtcgtaaaattccaaaaaatgtcctttgttttcc
cctttttagtcccagtaagggtccaaagtttgaaagtcgggcggcatccc
cccgtcagctcgcaaccctagtacctcGCCCCCCGGGGTCTAATTCTTCT
TTAGTTGTCAAAAGCTTTTAAGTTTGGAATTGACTTGTTCGATAATGTGT
TTAATgttatttcattgtttcagCGACCCGCGTAATCGAACCAACCATCA
AAAACGAAGTCGAGCAAAGTTTTGTAAATCAAGACAAGAACGAACCGAGA
AAAGGTTGGGATAATCAAGGCAAAACGCAATTCGTTTCCAAACTCCATGA
TATGGATCTACTCGGAACACAAATACCAACTATGACCATTAATAATATTG
ATTCTAAGGATGTCCCGAAACCAGGACAAACAATTACTATAGAAAATAAA
AGGGACGTAGCTAAACCAGGAGAGACAATAATCTTGAACAAGGACATTCC
GAAACAAGGCGAAACTATAACGCTTGAACACTCAGCGAACAAAAGCAGTA
TACCAAACATTGGAGGAAATAGTAACAAAACCATTGTTTTATCAGTTGAT
AAAAATGATGTAGAAAACTCTAAACGTGGTGAAGTTTCTCCAATTAGACA
AGAAAAGACATTGAACAACGAAAACCAAGACGGCTCAACAGATTCGAAGA
AACTGCAAAAATTATCTTCTaatgaaaacaaagaacaaGAGCCAACATCA
CAATCAGCCAATGAAAAGCTAGAAGTGACGCAATCAACCAATCAGGGGTC
CGAGAAAGAAAAGTTCGAAGTAGACGATCTTGAAGTGATTGAGATTTCTG
ATAACAAGGTTGAGACAGAAGTTTCTGTTGAAGATAAAACGAATGAAAAG
ACTGTCAAAAATGCTTGGTCTGATGGAGGTACTGtttgattttaatattt
gttaatctttaaattcttttgttttgttttgggtAGTGAATTGTCAGCCA
GAGTAGAggtcatccatatagtacgtacacagtgaagggggagaGAAGGG
Cttagcaaaagcgtacgtctattgtttaaataacgtcatttctattgttc
tctgtaCAAGGGGATCCCCGGAGGAGATGGCAAAAATCTGGAATTCTTTT
GCGTTCTTACTATGTGGATGATATAACCCCGTATAACCCTGTAGTGTTAC
GGTGAACTTTCACCAGCTCTGATCCTTAAACTACAGTAGAACGTGTACTA
AAACCTAAAGAATATCACCTGTATTGTGAGTCATCTTATGATTATAATGA
CGAGACCACACCTTCAACCAGGATGTTAGATACAGTTGACAacctctaat
tcgattttcaaggggaatcagACATTCATCGAATACGTGTGAACGTATAG
TGTTGTATTATAGCAGATTGATCATTCCCCTAATTCCCCTAATTCGATAC
GCACGAAGTAAATCGAATGATAGAGAGCAAAATATAAGATGGATAGATTC
GATCAATTTAAAAGCGGATCAGGATAAATATCGAATGTGTTACGGAAAAC
AATTAGTTCTGTGTTGGGGAATCGGATTTCGAAATCCTAATTTAAGCATA
TAAATAGGAATTAGAAACTCTTTCATAAAGGTCTATTTACACTTAACACA
ATCCCTCAAGagaattttcatcgaaaacgGGAGTCTATCAAATCATAAAG
TGTCGAATAGTACtttcaactgctctaacttgggactatctgacaaaaca
tgggacggcaattcggacaccatttcaccgaatctccaaagtcatttgat
ttgaattaatgaacggcgtattagaAAATAcccgatttctctttcgcacc
gagtaagcttttaaatcgaaatatgaaaaaaatccgtagtggaacacacg
cgaatgtctggaacgaaaaagaccaaattagtggcaaaacgatggggcgt
ttgacgtcactcgcgtgacaagttacacactcgttatttgttaatcccat
cgggcgatagctAGTTAGGCGGCTAGGCGGTGggcattctctaattctcc
aatcggcgcccggtcattttgaatgaaaacaaaaaaaattaaaaagggcg
cgctatcagtgaaagttatcgtgacatgttgtGACAGaaaatatgattga
taaacttggtggagctatcaaaacaaatttgttctcaaagagatttaaca
gtaagtgaaaatacaggccagaatatcaacagtcccatgttttgaccaat
cgtcccaagttagagcagttgacggtagagCGCCGTTTTTTGAGAGTTTC
TCAAGGAAACATGTACTTTCAATTCCATCGAATACGGGAGTCTCTCGAAT
AATAGAAAGTTGgcttttagagagtgtcaaccgtagtattaaatttgaat
aagagtGTGGGATAGCTGGTTTTCCACCTAGCTTCTCATCAGGACCAAAT
TGACCTGAGACACGGAGACAGGGTTGCCAAAGTGCAATCAAATGTTTAAC
CACTCACAAATGATAAATGGGCATTATTTTGCCTTTAACTTATATACCTT
GTCAAACTCTTTTTGCTATTCAGTTTCTCAAAAACCTCCCGAATCGACTC
CAGAGAAGCTTTCAAATATTGAAGTGAACAAATCACCAACTGACACGCAA
TCAAGACACGAAACAAGTGGAGACAGTATTGTTGAAATGTCTGAGGAAGA
GTGGTTAGTAACACATTAATGCTCCACAATTTTTTACTGTCAAGCACACT
CATTGGGCTTTTCCGGAAAAAACTTTGAATATGGGGTGGGGGTGGAGGAT
TTAACAATTAACCCCCCCCCCGAACAAAGTTACTTTTGGCCCCTCGAAGA
ACGGGTTTTatccccggacaagcatcagttgacccaccaaattacccccg
gacatagcaaattttgatgatttttcgctaaatCCGGACAATGTATCCTC
CACcgcccatgtacggacattttctggaagagcccatttctcTTGACTTA
TTATATGTCTTTTTATATACTGGGATTAATACTTACTCGTCAACTCGAAA
CCGGCAAATCTTTTCCCGTTTCGATAAATAGTCCAATTTGTACAAGACGG
AGAGATAACATTCAACTGTTAATTATCTTAAACTGAAGCAATTATTCAAA
TCAAACCTCATGTAAACGTCTTTCTgtaatcaaaaaataataatttttta
atgCAAGAAGAAGATACATCATAAACGATGCTCTATTCTCTTGGCTTACA
CTTGAACACATGTTTTGATCATTCCATTTCTTCACTGCTATTGACAGTAA
GTTCTTTCCCTCCATTTATTCTTGCTTCAGTTCGTTCCATACGCCAAATC
GATCATTTGGATTACAAAGTGGAAGTTACGatatcaaagaaaaaaaggta
GAGTGAAGTCTCAGTGATCAAGNGTTCTTTCCCTCCATTTATTCTTGCTT
CAGTTCGTTCCATACGCCGAATCGATCATTTGGATTACAAAGTGGAAGTT
ATGATATCAAAGAGAAAAAGGTAGAGTGAAGTCTCAGTGATAGATTCACT
GAAAAGATTatttaattttaaacatttttgaaattcttctaacttgcttc
tttgtcttcttATGCAAATTAACATTTTATGTATTAATGAATGTAGAAAT
CACCTCAACAGATTATTGATCGTCCATTAACGAAATTTTTGTTGCTTTCT
ACACCAACATAACTTTTCATTAGCCTGGTTGGCAGACCTCtatatagata
tacttcctaaaTAGTTTACTTTAAGAGACTTTTCCGTCAGAGGATGAGCA
AAAACCTACTTCTATATAGACTCTTATCGTCACTTTACTTTTTTCGCAGT
TACTACGAACATGTTCGTTACCAGACCTCCGACCAGCAGCccttgatgac
gtcatagaagAAGATGAGGAAAACTCCGAAGAACATGCCAGGTAAACTTA
TGTTATGGGAAGCCCTCTTAGTCTCTAATACTCTTCCTGTAtaacttcga
ataaacgcccccttcttaaACGCCCCTTGAACAAACGCCCCTCCTTAAAG
gaagaattttcaataaacgccccctcaaataaacgcccctgtCAAGTAGC
TGTCAGGAAGCATCATTTGAAGGGAAACTTTTTTATAGAGTTATTCGGCT
GTGCCATAtggaaaatgacgtcaaaataggttctgattttttttgttcac
ACGTGTGttatgaaaagttttttcttccAGTGATAAACAAGAGTCTGAGG
TAAAAGATGTTAAAGAAGAAGATaacgaaaatgaagatgaaaaggatGAG
agcaatgaagatgaagaagaagttTCTGATGCTGAAGCGGACGCAGACGA
TGATGACGAATTTGATGATTATGAAAGCATGTTGGAATCCATGAGAAATG
TCCTTGGTAAAACTGCAGGTATGTCTTTATTGTTTAagattttctttcga
aaaagattaaattttaAATGATATTCAAATAGTACGAACACATTCTCGTT
GTTAATTCTCAGTTTTCCTCTTCTTTTTAAAAGTACCATTTTTATGTTTC
AGCTAAAGAAGCTACAATCAACAACAACAGTAAGTCGAATATTCATCGTA
TTAATCACGCACTTTATCGTTTTAATTGACTCACGTTTCTCCTTCTATTT
TTCTAACTAGTACTTCCAACAGCTGTTCTTGGCAGCTGTCGTCATGCTGG
CAATCGAAAATGAgtttacaaataaaaaatgtgGTTTCTCGACTAACCTG
ATAATAATAATACACTCTTACGGACGTCTATGCAATTGACTTTGTCAGTA
TGGAACAGTATCTCTACCCACAAGTCCTCCTTATATTTGAGGGACTGTTA
GAATAATAGTgatgtactttaatgggataaattttcgcagtgattaaatt
tcgcggttcagctcatctgcaaaattttaagatttcgtgggGACTTAATT
TTGCAGATGGCATTACCGGGAGACCATATTTTTATGAGTGTGTGTCTTTT
TACTGCCAAATTACATATACTGATTTTCGAAATTATTTGgacttctttga
tgccagtttacattttaaaagtagttatttgacatttttaaagttttgtt
cAAAAACAATTTCGCGGATAAGACCTTTCTaaatttccattttattttac
ttaattttaCTGATGACACCcgaattcgcgaaaatttatctCTTATTGGA
GTTACTCATTTATTCATCCTTCATTTCAGTGACACTGGAGAATGGGCAAG
CGAACGAACAAGAGAACaatgaagaagatgaagatgaagatgatgaaTGG
GAAGAAGAAAGAGATGATGAAGGTTCCCTGTCAAGCCCCCTtgaattaga
aaatgaaaagtttctgTACTTCAAGACTTCATTTCCCTGTCAAACCATCC
TTGCattaaaaattggaaagttTAATTACTTCAAGGCTTATTTCCACTTC
TCAATAAACATCCAATTACCGAGATGGTGAATCAGCATTTTACTTTCTCT
TGCGCGATTCTGGTCACTCAGGGGATATTTTAAGATTGTAAGCCAACTTT
TGATTGATCTTTTCATTTGCAGATGtatcaaataaaaatcaaaagaatgt
GCTCCAAACAAATGGAGGTGATCGAGAAAATCTGTTTTCACGAATCGAGG
AATCAAGAATGGCTTTAGAAAATGAGTTGGGAATGGATCTTTTTATCAAG
GTGTACCGACATGTACAGgtgtgtattcatgatatgcaccgttgcaatgt
cttctggcaTTACATCGCGGACCCAATGGCTGATTGGTTGTAACTGACGT
AAAAccaatcaatacgtcactttcaaccaatcagctgttgggtccataga
agacattgcaatggtgcatatcatgaattccaagggtttatttcattttt
tctgtttCATCCAGTTTGAATGAATGgtcaaagtttgaaaaatttgcttA
CCCTAATTTAGGTtcatttttcttaagaaatcaacTTCTCAGACGGGCAG
GTATTATtgctttatatttttctctttcttaaCGAGAACAAAAACGAGAA
TTGGCTAAGGAGCAAAAATagtatgaaaaatgaaaagaaatttggtTGAA
TTAACCATCTTAAAAGTAGCAGGCTCAAAAATAAATGCCCAATGGCTCCG
AAATGTATTTAAGATATTTACAAGTAGCAACAAAGGGTGAGAGTTTCTTC
TTCTCTCTCTCCACTGTCGCACAGATGATGCAAGATAACGAAGATGATGA
ACTTGAGATGGGCACAACCGAAATCTCTCAACTACTCGGTGATAAAGAAA
ATCTGTACCAAAAAATACTTTATCTTGTCATCGCTGACTCAGCATATTCT
GAAGGTAAGCTGAATGACAGATGATAGATGATTGACTATGCTTACTAAAC
CACAATGTTGAGATAATACCTAAATTGTTTAGAATTTGAATAAATGTGTA
TTTTTATCAGGGCCGTAAAGattcaaaagctcaaaaattcTGTCTAGGAT
TGTAAAttttatataatgcttttaaactTATCTTAGCCTCTAAAGTTTAC
ACTTGTTAAATTTATTTCTCAGGAAATGATGGCACATTTTGAAACGTAAG
AACGTAACGTTGAGGTGAAACAGAGATATTGGCATTTTAAAACCTAGTGG
TAAGAATCGCAAATCATCAAACGTGACAGCTAAAGTTGTTACAGCAATGA
TTATTTTGTTAACAAAACAAAtggaatcaaaaatcaaaaataattattta
accaaaacaaaatttttttttataagctaCATATATGATAATTAACAAGC
AACcaattatagattttttttaattttcctggTACTCTTTACggaatttc
aaaatcaatacAGTTGAACTCGTGTAATTCGAACccctataattcgaacc
catgtaattcgaaaaatcattcaaatcgaacaaattttcaggtctcatca
agaaattttaatcatgtaattcgaattttcgatttttttgattgaCGAGG
AGATTTCCAAGAATCGAGAGCAGAAAATGAAACGATCGACAATCAAAgac
ttctttgaaaaattatgaattgacttttaaatttcaaaacatatgTCAAG
ATTATTTATACTAGTATTTCATTATTCTAGCTcgaaaacacaaaaaatgt
tcaaaatcgAATCAGGTCAAAATATGAAAACTCGTTCGAAACTCATGTAA
TTGGAACAAAATTTTTGTCCCTGGAGAATTagaattacatgagttcaacg
aataagatttttgaaacttttggccaacagatcaaattttccaggaaggc
tatgcctgggaaacagatgtttaaaaaaaggtcctcgctGGATGCTTTCG
GACATCAGTAAACTGACGTTAGCCATAACGTTTAGACGACGGGAaagttt
ttgcaattttgagtgaataaaagtgattttttcatcCACTGCCACTTGCA
GCACTTCTTGAATTTACTGTTAGACATGGATGTTGAGTGAACGTTATCAG
AATAAAAAAACACACTAAGGGACTCTGAGGACTTTGAGCTTGTGATGTTT
TTACGTCAGTTTGAAAATAATAGATTATGAAAtaactgttttcaaaatat
cttgTTCCTGATAAAATAGTATTGCCCTTGGTACCATCTTTagtgttttt
taactcgaaccAAATCGGATAGATATCATAAGATTTTATCGACAACTGTC
GAAAGCGTATGTTCCCTGGTACCTAACGAggaacaaagaaacaaaaatgt
ttATACGAATGTGGAGATTTCTCTGTAAATATGTGTTTTTGATTGTATAA
TGATGTGATTTTTTGCTTTATATCTTACGATATGTTTATTTTAGTACATA
AAATATGatgaaaatagttttaaatttATTATAAAAGAAAGCTTCAAATG
ACCTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031232XLOC_031232Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049177-exon-scaffold_153-1491911889:188152..188181TCONS_00049177-exon-scaffold_153-1491911889:188152..188181Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:188152..188181TCONS_00049177-exon-scaffold_153-1510915933:188152..188181Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:188152..188181TCONS_00049177-exon-scaffold_153-1575043694:188152..188181Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:188511..188578TCONS_00049177-exon-scaffold_153-1491911889:188511..188578Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:188511..188578TCONS_00049177-exon-scaffold_153-1510915933:188511..188578Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:188511..188578TCONS_00049177-exon-scaffold_153-1575043694:188511..188578Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:188735..188905TCONS_00049177-exon-scaffold_153-1491911889:188735..188905Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:188735..188905TCONS_00049177-exon-scaffold_153-1510915933:188735..188905Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:188735..188905TCONS_00049177-exon-scaffold_153-1575043694:188735..188905Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:191657..191755TCONS_00049177-exon-scaffold_153-1491911889:191657..191755Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:191657..191755TCONS_00049177-exon-scaffold_153-1510915933:191657..191755Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:191657..191755TCONS_00049177-exon-scaffold_153-1575043694:191657..191755Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:191881..191906TCONS_00049177-exon-scaffold_153-1491911889:191881..191906Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:191881..191906TCONS_00049177-exon-scaffold_153-1510915933:191881..191906Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:191881..191906TCONS_00049177-exon-scaffold_153-1575043694:191881..191906Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:192150..192211TCONS_00049177-exon-scaffold_153-1491911889:192150..192211Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:192150..192211TCONS_00049177-exon-scaffold_153-1510915933:192150..192211Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:192150..192211TCONS_00049177-exon-scaffold_153-1575043694:192150..192211Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:192623..192714TCONS_00049177-exon-scaffold_153-1491911889:192623..192714Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:192623..192714TCONS_00049177-exon-scaffold_153-1510915933:192623..192714Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:192623..192714TCONS_00049177-exon-scaffold_153-1575043694:192623..192714Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:192897..193029TCONS_00049177-exon-scaffold_153-1491911889:192897..193029Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:192897..193029TCONS_00049177-exon-scaffold_153-1510915933:192897..193029Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:192897..193029TCONS_00049177-exon-scaffold_153-1575043694:192897..193029Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:193575..194279TCONS_00049177-exon-scaffold_153-1491911889:193575..194279Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:193575..194279TCONS_00049177-exon-scaffold_153-1510915933:193575..194279Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:193575..194279TCONS_00049177-exon-scaffold_153-1575043694:193575..194279Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:195925..196054TCONS_00049177-exon-scaffold_153-1491911889:195925..196054Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:195925..196054TCONS_00049177-exon-scaffold_153-1510915933:195925..196054Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:195925..196054TCONS_00049177-exon-scaffold_153-1575043694:195925..196054Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:196682..196748TCONS_00049177-exon-scaffold_153-1491911889:196682..196748Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:196682..196748TCONS_00049177-exon-scaffold_153-1510915933:196682..196748Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:196682..196748TCONS_00049177-exon-scaffold_153-1575043694:196682..196748Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:197201..197292TCONS_00049177-exon-scaffold_153-1491911889:197201..197292Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:197201..197292TCONS_00049177-exon-scaffold_153-1510915933:197201..197292Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:197201..197292TCONS_00049177-exon-scaffold_153-1575043694:197201..197292Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:197582..197769TCONS_00049177-exon-scaffold_153-1491911889:197582..197769Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:197582..197769TCONS_00049177-exon-scaffold_153-1510915933:197582..197769Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:197582..197769TCONS_00049177-exon-scaffold_153-1575043694:197582..197769Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:198581..198673TCONS_00049177-exon-scaffold_153-1491911889:198581..198673Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:198581..198673TCONS_00049177-exon-scaffold_153-1510915933:198581..198673Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:198581..198673TCONS_00049177-exon-scaffold_153-1575043694:198581..198673Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:198924..199069TCONS_00049177-exon-scaffold_153-1491911889:198924..199069Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:198924..199069TCONS_00049177-exon-scaffold_153-1510915933:198924..199069Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:198924..199069TCONS_00049177-exon-scaffold_153-1575043694:198924..199069Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:199576..199705TCONS_00049177-exon-scaffold_153-1491911889:199576..199705Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:199576..199705TCONS_00049177-exon-scaffold_153-1510915933:199576..199705Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:199576..199705TCONS_00049177-exon-scaffold_153-1575043694:199576..199705Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1491911889:199924..201259TCONS_00049177-exon-scaffold_153-1491911889:199924..201259Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1510915933:199924..201259TCONS_00049177-exon-scaffold_153-1510915933:199924..201259Clytia hemisphaericaexon
TCONS_00049177-exon-scaffold_153-1575043694:199924..201259TCONS_00049177-exon-scaffold_153-1575043694:199924..201259Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_153supercontigscaffold_153:188152..201259 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.84463e-07	0	0	0	0	8.91652e-06	0.00662259	2.2834e-05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.26107e-10	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049177 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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