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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049061 ID=TCONS_00049061|Name=TCONS_00049061|organism=Clytia hemisphaerica|type=transcript|length=1337bp
tttccacacgtcagcaatctagtttttataaatataaaaactagattgta
aggttgattctaaaaaagaatagccgtTTTTTTAGACGACTACGTTATAG
AAAATATAGTTTATATGtttgaagaaatcaaaaatgctaCGGATTTGGTT
CGtgcaaataaaaaaagttggctTTGCTTCATATTGAAGAATGACAGCAT
AACCAGCGAAGACTAAAGCAGCATTAAAATCTtgtaaattttattggaaa
ttgcTTTAAGTAAAACCAAGGGGATGTCAATAAAACTGTTTGAATTACCA
AAGTAATTGAACAGTAGGGATTTGATCaccaaaccaaatcgaacaataAG
TGAACCTAATTCCAATAGATGTCAATcgagtcccatgttttgaccaatcg
tcccaagttagagcagttgatggtaccttcaattaatcttcgattttgtt
tgattacgattatgttcgatgagtttgaatgtgattaaattaaattggat
cactccattaaagctttttagcgtgggctgCTGAGTGCTTAAAGTATCGT
ACAGAAGCCAATAAAACCTAATACAATTTAGTCAATCGAATTTAATTGAA
CATaatcaaataaaatcaaatgtaattgaaaaaattgaaaggcaAATTCC
GGGTTATATTCAattgtgattcgattgcgttcgacaatcgaattgcaatg
attcgattgtgtttgacACCGTCCAGCTAATTGAACAATAGGGATTTGAT
CACCAGAACAAATCGAACAATAAGTaaaccaaaaaatatttgattgatGT
TCGACTGTGATTTTATCATAGTTAAATAGGTCAGTAGTAGGTGTTTGGTG
TTCGGTCGTTGTTTCGATAATAGGTTCGATCAAGCAAAGTTTGATaggtt
tgaatttctttttgattgcTTTCTGCCTTCCATTTTCTGTTCACACTCCT
TCAAGGCGGACCCTTGCTTGACCTTGATTAATTTAGGGTTGAAATTCCAT
GGGGTCTAGAATTACCTGTTTTGTTCCTGGAAAAAAATGCCCAGTGTCAA
ATGAGTAAACTTTTTGCCCCGAAAAATCCAAACATCAGACATAAATCAGT
CTGCAATATGTATGTATGTCCAGCAAGTGTAGTGTTAAGACTTTTTTTTG
TACCACCAGACACAATATAAATTGTGCAGTGTCAAGAATTCTTTCCCATA
GTCCCTTCCAACAACAAAGGATAAAAAAGCAACATTTCTATGAAGGGAAG
GCTTTGTTGCCACAAACCAGTCATCCCAGAGGTAACTTTTCTGATCTCTA
GCATAAAATACTCCTATTCTTGTTTATTCATCCTGAT Run BLAST on NCBI transcript from alignment at scaffold_15:435415..436751 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049061 ID=TCONS_00049061|Name=TCONS_00049061|organism=Clytia hemisphaerica|type=transcript|length=1337bp|location=Sequence derived from alignment at scaffold_15:435415..436751 (Clytia hemisphaerica)
ATCAGGATGAATAAACAAGAATAGGAGTATTTTATGCTAGAGATCAGAAA
AGTTACCTCTGGGATGACTGGTTTGTGGCAACAAAGCCTTCCCTTCATAG
AAATGTTGCTTTTTTATCCTTTGTTGTTGGAAGGGACTATGGGAAAGAAT
TCTTGACACTGCACAATTTATATTGTGTCTGGTGGTACAAAAAAAAGTCT
TAACACTACACTTGCTGGACATACATACATATTGCAGACTGATTTATGTC
TGATGTTTGGATTTTTCGGGGCAAAAAGTTTACTCATTTGACACTGGGCA
TTTTTTTCCAGGAACAAAACAGGTAATTCTAGACCCCATGGAATTTCAAC
CCTAAATTAATCAAGGTCAAGCAAGGGTCCGCCTTGAAGGAGTGTGAACA
GAAAATGGAAGGCAGAAAgcaatcaaaaagaaattcaaacctATCAAACT
TTGCTTGATCGAACCTATTATCGAAACAACGACCGAACACCAAACACCTA
CTACTGACCTATTTAACTATGATAAAATCACAGTCGAACatcaatcaaat
attttttggtttACTTATTGTTCGATTTGTTCTGGTGATCAAATCCCTAT
TGTTCAATTAGCTGGACGGTgtcaaacacaatcgaatcattgcaattcga
ttgtcgaacgcaatcgaatcacaatTGAATATAACCCGGAATTtgccttt
caattttttcaattacatttgattttatttgattATGTTCAATTAAATTC
GATTGACTAAATTGTATTAGGTTTTATTGGCTTCTGTACGATACTTTAAG
CACTCAGcagcccacgctaaaaagctttaatggagtgatccaatttaatt
taatcacattcaaactcatcgaacataatcgtaatcaaacaaaatcgaag
attaattgaaggtaccatcaactgctctaacttgggacgattggtcaaaa
catgggactcgATTGACATCTATTGGAATTAGGTTCACTtattgttcgat
ttggtttggtGATCAAATCCCTACTGTTCAATTACTTTGGTAATTCAAAC
AGTTTTATTGACATCCCCTTGGTTTTACTTAAAgcaatttccaataaaat
ttacaAGATTTTAATGCTGCTTTAGTCTTCGCTGGTTATGCTGTCATTCT
TCAATATGAAGCAAagccaactttttttatttgcaCGAACCAAATCCGta
gcatttttgatttcttcaaaCATATAAACTATATTTTCTATAACGTAGTC
GTCTAAAAAAacggctattcttttttagaatcaaccttacaatctagttt
ttatatttataaaaactagattgctgacgtgtggaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049061-exon-scaffold_15-1491911889:435415..436751 | TCONS_00049061-exon-scaffold_15-1491911889:435415..436751 | Clytia hemisphaerica | exon |
| TCONS_00049061-exon-scaffold_15-1510915933:435415..436751 | TCONS_00049061-exon-scaffold_15-1510915933:435415..436751 | Clytia hemisphaerica | exon |
| TCONS_00049061-exon-scaffold_15-1575043694:435415..436751 | TCONS_00049061-exon-scaffold_15-1575043694:435415..436751 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:435415..436751 . |
Blast
The following BLAST results are available for this feature:
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