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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049051 ID=TCONS_00049051|Name=TCONS_00049051|organism=Clytia hemisphaerica|type=transcript|length=1407bp
agaaatattaCATGTTTGTGGGAAAATGTAACTgcgtctttaaaaaaaag
tttccagCGACACCAAATAACATCAGGCAGAATGTTAATGTTTTGGTTGT
TTCTAATACCAACTATTGTTTTGGCCAGGCCACGTGGTCACCATTCAGCC
AATAAGAGACAACACGTGGCAATCAACCTCGGAGAGAAATTAAATATTGA
AGACAAGAGTCCGAATGAACTGGACATTGTTCGCCAAGAAGATGATATGA
TCAAATCGAATCTTCTGCCAAACATGAAAGATATGATGGTTCAACAACAG
CAAGCACAAGTTGAAGAAAATAGTGGACTTAGATTCCCTAGCATTGGAAA
TAATCCATTTTCAAATTCACCTGTGGAAATGAATAATAAAAAGCCTGCTA
GTGAGCAGCAGAATTTCTGGCTTGGTTCTGATACTAAGGATGGAAATGTT
GGAGAGCTACCTCAAATTGAGAATGATTTTCATACAAAGATTGAAGGTGA
GAAAACAACAGCTGGAGAATCAAAGTTTGTCGAGGATGGGGAAAAAGACA
TTTCCCATGGTAGGAAAAATGAAGGTTCCCATACTGaaggagaaaatgaa
aatgctggATTAATAAATGATAAAATGAGTCATGAGGATGGAAACGAGAC
TCTGGAAAAGCCTGGGAACAAGGAGAATCAAGATGGTGCGTCACGAAGGG
ATGATACTGGAGATTTACCcaatgaaaattctttttcagatAAGGAGCTA
GAAGATCCTAAAGGGAAATTAATCAAAAGTGAAGAAAATCATCATGAAGA
AACTGATCAAGAAGATGGACATTCTATATCTGGAAAACAAGACATTTCTG
CTAACCGACGTGTTAGCCATTCTTATAGAAGGGAACAAAAACCTGATGGT
GATATTTCGGACGTTTTGAAATCAGTTTTTGGAGAGAACGGTGATCCTAA
TTATCCAGTAGAAagacaattttaaaatttttgttctttGTTCTACTAGa
gttattttgctgtaaatatGAAATACTGGGGAAGCAACTCTGGCTTTCAG
TAAAAGATCGCAGTAGTGTGTGCAAAGGGCGGACAATTATCTAATCCCGA
GCGATTTGGCGATGTCTAAAGACAGCTTTTTTATATCTTATGATAGGTTT
TAAAAAAGAAGTTTGGAAAAATTTGCCTCCCAAGTTTGGACAAATTTGGA
TCAAACAGTAAGAGAAAGTCATTTTTGCCTTAACAAGAATATCTGTACTT
ACTTTAACATTActcccgtcttttttgtcatcttATAAGTATTTCCTAAT
TTTATGTTCTgatgtgcgagtgtggctcaacggatagcgcgctgtgtttc
tgatcagaaactctttcatttggtgggttcgaaccccggtcgggtcgata
tttcaag Run BLAST on NCBI protein sequence of TCONS_00049051-protein >TCONS_00049051-protein ID=TCONS_00049051-protein|Name=TCONS_00049051-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
RNITCLWENVTASLKKSFQRHQITSGRMLMFWLFLIPTIVLARPRGHHSA
NKRQHVAINLGEKLNIEDKSPNELDIVRQEDDMIKSNLLPNMKDMMVQQQ
QAQVEENSGLRFPSIGNNPFSNSPVEMNNKKPASEQQNFWLGSDTKDGNV
GELPQIENDFHTKIEGEKTTAGESKFVEDGEKDISHGRKNEGSHTEGENE
NAGLINDKMSHEDGNETLEKPGNKENQDGASRRDDTGDLPNENSFSDKEL
EDPKGKLIKSEENHHEETDQEDGHSISGKQDISANRRVSHSYRREQKPDG
DISDVLKSVFGENGDPNYPVERQF Run BLAST on NCBI transcript from alignment at scaffold_15:156932..158338 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049051 ID=TCONS_00049051|Name=TCONS_00049051|organism=Clytia hemisphaerica|type=transcript|length=1407bp|location=Sequence derived from alignment at scaffold_15:156932..158338 (Clytia hemisphaerica)
cttgaaatatcgacccgaccggggttcgaacccaccaaatgaaagagttt
ctgatcagaaacacagcgcgctatccgttgagccacactcgcacatcAGA
ACATAAAATTAGGAAATACTTATaagatgacaaaaaagacgggagTAATG
TTAAAGTAAGTACAGATATTCTTGTTAAGGCAAAAATGACTTTCTCTTAC
TGTTTGATCCAAATTTGTCCAAACTTGGGAGGCAAATTTTTCCAAACTTC
TTTTTTAAAACCTATCATAAGATATAAAAAAGCTGTCTTTAGACATCGCC
AAATCGCTCGGGATTAGATAATTGTCCGCCCTTTGCACACACTACTGCGA
TCTTTTACTGAAAGCCAGAGTTGCTTCCCCAGTATTTCatatttacagca
aaataactCTAGTAGAACaaagaacaaaaattttaaaattgtctTTCTAC
TGGATAATTAGGATCACCGTTCTCTCCAAAAACTGATTTCAAAACGTCCG
AAATATCACCATCAGGTTTTTGTTCCCTTCTATAAGAATGGCTAACACGT
CGGTTAGCAGAAATGTCTTGTTTTCCAGATATAGAATGTCCATCTTCTTG
ATCAGTTTCTTCATGATGATTTTCTTCACTTTTGATTAATTTCCCTTTAG
GATCTTCTAGCTCCTTatctgaaaaagaattttcattgGGTAAATCTCCA
GTATCATCCCTTCGTGACGCACCATCTTGATTCTCCTTGTTCCCAGGCTT
TTCCAGAGTCTCGTTTCCATCCTCATGACTCATTTTATCATTTATTAATc
cagcattttcattttctccttCAGTATGGGAACCTTCATTTTTCCTACCA
TGGGAAATGTCTTTTTCCCCATCCTCGACAAACTTTGATTCTCCAGCTGT
TGTTTTCTCACCTTCAATCTTTGTATGAAAATCATTCTCAATTTGAGGTA
GCTCTCCAACATTTCCATCCTTAGTATCAGAACCAAGCCAGAAATTCTGC
TGCTCACTAGCAGGCTTTTTATTATTCATTTCCACAGGTGAATTTGAAAA
TGGATTATTTCCAATGCTAGGGAATCTAAGTCCACTATTTTCTTCAACTT
GTGCTTGCTGTTGTTGAACCATCATATCTTTCATGTTTGGCAGAAGATTC
GATTTGATCATATCATCTTCTTGGCGAACAATGTCCAGTTCATTCGGACT
CTTGTCTTCAATATTTAATTTCTCTCCGAGGTTGATTGCCACGTGTTGTC
TCTTATTGGCTGAATGGTGACCACGTGGCCTGGCCAAAACAATAGTTGGT
ATTAGAAACAACCAAAACATTAACATTCTGCCTGATGTTATTTGGTGTCG
ctggaaacttttttttaaagacgcAGTTACATTTTCCCACAAACATGtaa
tatttct Coding sequence (CDS) from alignment at scaffold_15:156932..158338 >TCONS_00049051 ID=TCONS_00049051|Name=TCONS_00049051|organism=Clytia hemisphaerica|type=CDS|length=975bp|location=Sequence derived from alignment at scaffold_15:156932..158338 (Clytia hemisphaerica)
ttaaaattgtctTTCTACTGGATAATTAGGATCACCGTTCTCTCCAAAAA
CTGATTTCAAAACGTCCGAAATATCACCATCAGGTTTTTGTTCCCTTCTA
TAAGAATGGCTAACACGTCGGTTAGCAGAAATGTCTTGTTTTCCAGATAT
AGAATGTCCATCTTCTTGATCAGTTTCTTCATGATGATTTTCTTCACTTT
TGATTAATTTCCCTTTAGGATCTTCTAGCTCCTTatctgaaaaagaattt
tcattgGGTAAATCTCCAGTATCATCCCTTCGTGACGCACCATCTTGATT
CTCCTTGTTCCCAGGCTTTTCCAGAGTCTCGTTTCCATCCTCATGACTCA
TTTTATCATTTATTAATccagcattttcattttctccttCAGTATGGGAA
CCTTCATTTTTCCTACCATGGGAAATGTCTTTTTCCCCATCCTCGACAAA
CTTTGATTCTCCAGCTGTTGTTTTCTCACCTTCAATCTTTGTATGAAAAT
CATTCTCAATTTGAGGTAGCTCTCCAACATTTCCATCCTTAGTATCAGAA
CCAAGCCAGAAATTCTGCTGCTCACTAGCAGGCTTTTTATTATTCATTTC
CACAGGTGAATTTGAAAATGGATTATTTCCAATGCTAGGGAATCTAAGTC
CACTATTTTCTTCAACTTGTGCTTGCTGTTGTTGAACCATCATATCTTTC
ATGTTTGGCAGAAGATTCGATTTGATCATATCATCTTCTTGGCGAACAAT
GTCCAGTTCATTCGGACTCTTGTCTTCAATATTTAATTTCTCTCCGAGGT
TGATTGCCACGTGTTGTCTCTTATTGGCTGAATGGTGACCACGTGGCCTG
GCCAAAACAATAGTTGGTATTAGAAACAACCAAAACATTAACATTCTGCC
TGATGTTATTTGGTGTCGctggaaacttttttttaaagacgcAGTTACAT
TTTCCCACAAACATGtaatatttct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049051-exon-scaffold_15-1491911889:156932..158338 | TCONS_00049051-exon-scaffold_15-1491911889:156932..158338 | Clytia hemisphaerica | exon |
| TCONS_00049051-exon-scaffold_15-1510915933:156932..158338 | TCONS_00049051-exon-scaffold_15-1510915933:156932..158338 | Clytia hemisphaerica | exon |
| TCONS_00049051-exon-scaffold_15-1575043694:156932..158338 | TCONS_00049051-exon-scaffold_15-1575043694:156932..158338 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:156932..158338 . |
Blast
The following BLAST results are available for this feature:
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