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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048808 ID=TCONS_00048808|Name=TCONS_00048808|organism=Clytia hemisphaerica|type=transcript|length=901bp
ATTGTTTTAACATGGAATTATTTGCAAACCTTGAGGATCAGTTCCAAGTG
AATGACTTGTAAAACACACTATGCAGTTAATAGCGAGTTTTTGTATTCGA
AATAAATtgaaggaacaatattcaatcataaaatccctttgcacaagctg
ctgcacaagggaagacatagtggcctctactatAAGGCAAAGTTGACGTG
TCACCAAATTCGTCGTCCACATTGCTTTGATGACGgtcaaaacaccaaaa
taccgtcgtctgtttaggtaagCAAAGGTGATATAGAGGCatcgtacatc
aactatcgattcTGTTTTGCATCGAATTTATTTACCGTCGCCcttccaat
tccccttgaaaatcaaattagatAGCGTCAACTGAACAAAAGTGAGAAAA
GAAAAGCCATGTCAACCAAAGAGCAATGTTTCTAGCGTTTTCCATCTGGA
ACGGTTGGCCTCCAAGGAGGCTTTTAACTATTTAAAGTCCATTTGTTTTA
AGTGTGCACTCCTTTTTGCTACGATGTGAAAACCATGTCACTGTGATTAG
AATAATTCCCTAAAGGGTGGCTTCCACAAGGTATTAAAAATGCTTACTTA
AAGCAAATGGACTTATGAAAGGGCCTAAGACCAATTATTCATACTACATC
TTGGTAGTTAACTTTCTTTGCAACCTCTCGTAGTGCTAAAATTTCATATT
CTTCTATTTTCAATCAATCTTataatttttaccaaattatATGGATAATA
GTTTTTAGAACCTCTTAATATTAAAATATAGATAGATTACCCTCAAGTAT
ACTAAAAAAGTTTTAGTTTATACtaaaaaagttttagttttagCCTGTTT
TAGCTTTAGCTTTTAAAGTACCTAGGTCGAGGCTTGTCTTGATCTGATCA
C Run BLAST on NCBI transcript from alignment at scaffold_146:367517..368417 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048808 ID=TCONS_00048808|Name=TCONS_00048808|organism=Clytia hemisphaerica|type=transcript|length=901bp|location=Sequence derived from alignment at scaffold_146:367517..368417 (Clytia hemisphaerica)
GTGATCAGATCAAGACAAGCCTCGACCTAGGTACTTTAAAAGCTAAAGCT
AAAACAGGctaaaactaaaacttttttaGTATAAACTAAAACTTTTTTAG
TATACTTGAGGGTAATCTATCTATATTTTAATATTAAGAGGTTCTAAAAA
CTATTATCCATataatttggtaaaaattatAAGATTGATTGAAAATAGAA
GAATATGAAATTTTAGCACTACGAGAGGTTGCAAAGAAAGTTAACTACCA
AGATGTAGTATGAATAATTGGTCTTAGGCCCTTTCATAAGTCCATTTGCT
TTAAGTAAGCATTTTTAATACCTTGTGGAAGCCACCCTTTAGGGAATTAT
TCTAATCACAGTGACATGGTTTTCACATCGTAGCAAAAAGGAGTGCACAC
TTAAAACAAATGGACTTTAAATAGTTAAAAGCCTCCTTGGAGGCCAACCG
TTCCAGATGGAAAACGCTAGAAACATTGCTCTTTGGTTGACATGGCTTTT
CTTTTCTCACTTTTGTTCAGTTGACGCTatctaatttgattttcaagggg
aattggaagGGCGACGGTAAATAAATTCGATGCAAAACAgaatcgatagt
tgatgtacgatGCCTCTATATCACCTTTGcttacctaaacagacgacggt
attttggtgttttgacCGTCATCAAAGCAATGTGGACGACGAATTTGGTG
ACACGTCAACTTTGCCTTatagtagaggccactatgtcttcccttgtgca
gcagcttgtgcaaagggattttatgattgaatattgttccttcaATTTAT
TTCGAATACAAAAACTCGCTATTAACTGCATAGTGTGTTTTACAAGTCAT
TCACTTGGAACTGATCCTCAAGGTTTGCAAATAATTCCATGTTAAAACAA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048808-exon-scaffold_146-1491911889:367517..368417 | TCONS_00048808-exon-scaffold_146-1491911889:367517..368417 | Clytia hemisphaerica | exon |
| TCONS_00048808-exon-scaffold_146-1510915933:367517..368417 | TCONS_00048808-exon-scaffold_146-1510915933:367517..368417 | Clytia hemisphaerica | exon |
| TCONS_00048808-exon-scaffold_146-1575043694:367517..368417 | TCONS_00048808-exon-scaffold_146-1575043694:367517..368417 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_146 | supercontig | scaffold_146:367517..368417 . |
Blast
The following BLAST results are available for this feature:
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