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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048792 ID=TCONS_00048792|Name=TCONS_00048792|organism=Clytia hemisphaerica|type=transcript|length=1043bp
tgagtgGCGATTTGAACATTTTAGCGGTCGAAAGGCAGTATCAATCAAAA
CCTGTTATTATCGTTCTTACAATTTAAAAATCCCTTAATCAAAtcgatct
gattggttgaaactcaaaaTTATGATCTAATGGGCCTAAGCTATATTACC
TGTCATactcaattcaaaaaaaagatACGAGATTCTTTTGAGCAACCCAC
CCCTCTTATGATACGAATAGCCCCAACATTCACATGCCTAACATAACTGG
TGGGCGGGTTTGGGGCGTCTGtagaatccctttcgctttgcgaacacgag
actcgttctccgtgcgtaaccccttcaACCACTTTTCTGAAAAACCCCCT
TACAGAGTTTTAGTAAACTTCCTCTTATTCTCGAATCTtctttgaagatc
gaattagagagggtcaAAACTGATTTAGAACTGAATTTTAGATTGcaaaa
taaagatttgaaagaaaaatgaaacgaATCTCCTCCGTTGCAAACATACT
TGGCAAATTTTGATTTGCTTTCAAATGCTACTGGTGtggtcccagctggc
acacaacgctatttcaacgttcatcatCTATAATGATTATATTATGGACG
TTGTGTACAGTAGATAAATGTTGAAGCAACGTTGTGTGCAAGCGCAGGCT
CCAAAAACATGGTCAATTACGTATAAGAATGAGATGAGTACACCATTGTA
CATCCTCCAAAGCGAGTATTGGGTTCGCATCAACCTCGCTTTGGAGTTTT
GCATCAAAGAAGAAGCGCTCATTGATGTACTTCACAACGTGCACAAGGAT
GTTTCTTATACTGGGCAGCAATTTACCATGGCGTTCTACATCCATGCTTC
ATCATGGCTGGAACCCCCTGGTCTGAGGGGCTAAAAGGGCAAgcatgtta
ggggtcacctaatttttttcagatggacctggggggctagattctatgtt
tggtgatttttttctgaacttgttttttttttcactatgGAATGTCTAAG
AAAGTGAGTTTCTGAGAAAATTGTGTGTGCGCTGAGCTATTTC Run BLAST on NCBI transcript from alignment at scaffold_146:99709..100751 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048792 ID=TCONS_00048792|Name=TCONS_00048792|organism=Clytia hemisphaerica|type=transcript|length=1043bp|location=Sequence derived from alignment at scaffold_146:99709..100751 (Clytia hemisphaerica)
GAAATAGCTCAGCGCACACACAATTTTCTCAGAAACTCACTTTCTTAGAC
ATTCcatagtgaaaaaaaaaacaagttcagaaaaaaatcaccaaacatag
aatctagccccccaggtccatctgaaaaaaattaggtgacccctaacatg
cTTGCCCTTTTAGCCCCTCAGACCAGGGGGTTCCAGCCATGATGAAGCAT
GGATGTAGAACGCCATGGTAAATTGCTGCCCAGTATAAGAAACATCCTTG
TGCACGTTGTGAAGTACATCAATGAGCGCTTCTTCTTTGATGCAAAACTC
CAAAGCGAGGTTGATGCGAACCCAATACTCGCTTTGGAGGATGTACAATG
GTGTACTCATCTCATTCTTATACGTAATTGACCATGTTTTTGGAGCCTGC
GCTTGCACACAACGTTGCTTCAACATTTATCTACTGTACACAACGTCCAT
AATATAATCATTATAGatgatgaacgttgaaatagcgttgtgtgccagct
gggaccaCACCAGTAGCATTTGAAAGCAAATCAAAATTTGCCAAGTATGT
TTGCAACGGAGGAGATtcgtttcatttttctttcaaatctttattttgCA
ATCTAAAATTCAGTTCTAAATCAGTTTtgaccctctctaattcgatcttc
aaagaAGATTCGAGAATAAGAGGAAGTTTACTAAAACTCTGTAAGGGGGT
TTTTCAGAAAAGTGGTtgaaggggttacgcacggagaacgagtctcgtgt
tcgcaaagcgaaagggattctaCAGACGCCCCAAACCCGCCCACCAGTTA
TGTTAGGCATGTGAATGTTGGGGCTATTCGTATCATAAGAGGGGTGGGTT
GCTCAAAAGAATCTCGTatcttttttttgaattgagtATGACAGGTAATA
TAGCTTAGGCCCATTAGATCATAAttttgagtttcaaccaatcagatcga
TTTGATTAAGGGATTTTTAAATTGTAAGAACGATAATAACAGGTTTTGAT
TGATACTGCCTTTCGACCGCTAAAATGTTCAAATCGCcactca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048792-exon-scaffold_146-1491911889:99709..100751 | TCONS_00048792-exon-scaffold_146-1491911889:99709..100751 | Clytia hemisphaerica | exon |
| TCONS_00048792-exon-scaffold_146-1510915933:99709..100751 | TCONS_00048792-exon-scaffold_146-1510915933:99709..100751 | Clytia hemisphaerica | exon |
| TCONS_00048792-exon-scaffold_146-1575043694:99709..100751 | TCONS_00048792-exon-scaffold_146-1575043694:99709..100751 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_146 | supercontig | scaffold_146:99709..100751 . |
Blast
The following BLAST results are available for this feature:
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