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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048782 ID=TCONS_00048782|Name=TCONS_00048782|organism=Clytia hemisphaerica|type=transcript|length=1179bp
GGCAGTCACAACTCCGGAACCTTCCACCAAAGGACACAACATCTATATAT
GACCTTGCAACCTATATTTCTCCTTTCAGTAGTCTCTCGACCAACAAGAC
AACAAGGACGACACCAACTCAACAATTGGAAACCATACACTGACCAATAA
ACCAAAACGACACcggatgaaatttttcacaccttACAAGACAACATCAA
ACCAATCCTTCCAGGACCATCTGAATGACTCCAATGAACACTCGACTATT
CGAATCGAGCAACTAATAACAATGATGCCTTCACCACAACTTCCTAAACC
CAAACATCAAGTTAAATTCCAAACAGTTGCTTAGGTAATGTCACCTTATC
TTGATACATCGCAGCCTAAACCACCTAACGGAATCATCATTCCCTGACGG
ACAACTTATTCTAATATTGTTAACTCCAATCCTAAATACACTATTTCCAA
GAACCAACCTATCCACGTAAATCAACTAACTCCACACTACAAATACACAC
CATCAGCATGATGGAAAAGAATAGGTGGAAGTTGTTGTGGCGGAAGGTTA
AGTTCTTCACACACCATCACCTGCTCCTCTCTCCCGACTATATGGGGAGG
GGAGAGGAGAAAGAAAGGTCAAGGAAAGAGTCATCATATCGGCAAACATA
CGAAGAGCCACAAAAATTTGACCAATGATGATTACTTACCCTTGACGGAA
GAACGgataaaacaaatgaaacatGTGGAGGTGAGGAAAGACCTTAGAAG
GAGAAACTTTACCACTCAGTGGCTGACACTTTCTTTCCTTTGAAGCAGAG
ACAAAGTATAAAACGACATCCAAAGGGAAAAGCTGGAAAGTATGGAGCTC
GTCAATATCAGACGAAGTACGACCCAAAAGATGGGACAACGGAAAGGGTG
TTGACAGAGATCAGGTTGGGCAAAAAGGTCAAAGATATCGCGATTAAATA
TAACATCCCACGTTCCACTTTGGAtgacaaaataaaagttaatattCACG
ATACATCAACTCCATGCAAATGATATCGATGGAGCAAAAGATTTGTGCTG
CAAAGATTTCTACCTAATCTGAAGAGCAAAGTTGCATGCTTAATTTGAGC
TCGTTAAAGCAAATCATAATTCTCTGAAAGATGAAGAAATACCTACTTTA
CAGTTTCTATAAAATGTTTTGCTTCAGAC Run BLAST on NCBI transcript from alignment at scaffold_146:63023..64201 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048782 ID=TCONS_00048782|Name=TCONS_00048782|organism=Clytia hemisphaerica|type=transcript|length=1179bp|location=Sequence derived from alignment at scaffold_146:63023..64201 (Clytia hemisphaerica)
GTCTGAAGCAAAACATTTTATAGAAACTGTAAAGTAGGTATTTCTTCATC
TTTCAGAGAATTATGATTTGCTTTAACGAGCTCAAATTAAGCATGCAACT
TTGCTCTTCAGATTAGGTAGAAATCTTTGCAGCACAAATCTTTTGCTCCA
TCGATATCATTTGCATGGAGTTGATGTATCGTGaatattaacttttattt
tgtcaTCCAAAGTGGAACGTGGGATGTTATATTTAATCGCGATATCTTTG
ACCTTTTTGCCCAACCTGATCTCTGTCAACACCCTTTCCGTTGTCCCATC
TTTTGGGTCGTACTTCGTCTGATATTGACGAGCTCCATACTTTCCAGCTT
TTCCCTTTGGATGTCGTTTTATACTTTGTCTCTGCTTCAAAGGAAAGAAA
GTGTCAGCCACTGAGTGGTAAAGTTTCTCCTTCTAAGGTCTTTCCTCACC
TCCACatgtttcatttgttttatcCGTTCTTCCGTCAAGGGTAAGTAATC
ATCATTGGTCAAATTTTTGTGGCTCTTCGTATGTTTGCCGATATGATGAC
TCTTTCCTTGACCTTTCTTTCTCCTCTCCCCTCCCCATATAGTCGGGAGA
GAGGAGCAGGTGATGGTGTGTGAAGAACTTAACCTTCCGCCACAACAACT
TCCACCTATTCTTTTCCATCATGCTGATGGTGTGTATTTGTAGTGTGGAG
TTAGTTGATTTACGTGGATAGGTTGGTTCTTGGAAATAGTGTATTTAGGA
TTGGAGTTAACAATATTAGAATAAGTTGTCCGTCAGGGAATGATGATTCC
GTTAGGTGGTTTAGGCTGCGATGTATCAAGATAAGGTGACATTACCTAAG
CAACTGTTTGGAATTTAACTTGATGTTTGGGTTTAGGAAGTTGTGGTGAA
GGCATCATTGTTATTAGTTGCTCGATTCGAATAGTCGAGTGTTCATTGGA
GTCATTCAGATGGTCCTGGAAGGATTGGTTTGATGTTGTCTTGTaaggtg
tgaaaaatttcatccgGTGTCGTTTTGGTTTATTGGTCAGTGTATGGTTT
CCAATTGTTGAGTTGGTGTCGTCCTTGTTGTCTTGTTGGTCGAGAGACTA
CTGAAAGGAGAAATATAGGTTGCAAGGTCATATATAGATGTTGTGTCCTT
TGGTGGAAGGTTCCGGAGTTGTGACTGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048782-exon-scaffold_146-1491911889:63023..64201 | TCONS_00048782-exon-scaffold_146-1491911889:63023..64201 | Clytia hemisphaerica | exon |
| TCONS_00048782-exon-scaffold_146-1510915933:63023..64201 | TCONS_00048782-exon-scaffold_146-1510915933:63023..64201 | Clytia hemisphaerica | exon |
| TCONS_00048782-exon-scaffold_146-1575043694:63023..64201 | TCONS_00048782-exon-scaffold_146-1575043694:63023..64201 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_146 | supercontig | scaffold_146:63023..64201 . |
Blast
The following BLAST results are available for this feature:
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