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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048776 ID=TCONS_00048776|Name=TCONS_00048776|organism=Clytia hemisphaerica|type=transcript|length=996bp
GACgagaatttttggcaaaaactttctTGCATGAAAACTTCGCAATGATT
TTAATTTCGCAGTTTTCGAATATCTTTACAACTCAAAACAGCTTTCCCTA
TCTTCGATTTCTTATTAATTTTAAACTATCAAGAACACACACAAGCTGTC
TTGGATATGCTCAAGTTTAGGTTCCCAGAttaacgtcacgtcgtcaaaaG
ATGTTGCCTTGTTTTGATTGACGAAGAAATTGAAAGAGAGATGACGCTGT
CACTCAATAATTGGCGTCTtggttttccaatttttttggttATGAACGAG
CTGAAAAATCTGTTCCCATATGATATTGAGTTTAAGTTTTTGaagtgaaa
aatgtaaaaaatattaaGTGTTCTCAAAAAACGTAATATAACGTAATTTG
TCATCTTGACGAGCTAAACTAACCATACACCCCTGaatcagtgacccggt
cagatCCGCCTCGGTGAATAACCCGGTGaaaaaaatgctctaaaatagcc
taaatttaaGCACCAGTGAAGAAATTACTCACCCCAGGCAATTGAAGCTG
ANACCATACACCCCTGaatcagtgacccggtcagatCCGCCTCGGTGAAT
AACCCGGTGaaaaaaatgctctaaaatagcctaaatttaaGCACCAGTAA
AGAAATGACTCATCCCAGGCAATTTAAGGTGTGTGATCTCAACCCCAGtg
agaaattgaaataaaatgctGTCCAACCCGGTGAAATTTTACAGAACCCA
AATTACGCTTTTTCAAAACTCCTTGGTTAATCCCTCAGAACATAGTCCAA
AATTCACACTGGTGTAAAAATTAGGCTCGAATTTCTATCCCAGTTGAATT
CTACAGACAACGTTTTTCAAAAGAACTTGGTATCATTTCAGGAGGCTGGC
ACGTGGGGTTGACGAATTCCACAATTCCCCAGACAACCACTCCGTTTGTG
ATCAAGCGAAAGGTCAGGTCAACTTTGAAATTGATGCTTCAGACAC Run BLAST on NCBI transcript from alignment at scaffold_146:39343..40338 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048776 ID=TCONS_00048776|Name=TCONS_00048776|organism=Clytia hemisphaerica|type=transcript|length=996bp|location=Sequence derived from alignment at scaffold_146:39343..40338 (Clytia hemisphaerica)
GTGTCTGAAGCATCAATTTCAAAGTTGACCTGACCTTTCGCTTGATCACA
AACGGAGTGGTTGTCTGGGGAATTGTGGAATTCGTCAACCCCACGTGCCA
GCCTCCTGAAATGATACCAAGTTCTTTTGAAAAACGTTGTCTGTAGAATT
CAACTGGGATAGAAATTCGAGCCTAATTTTTACACCAGTGTGAATTTTGG
ACTATGTTCTGAGGGATTAACCAAGGAGTTTTGAAAAAGCGTAATTTGGG
TTCTGTAAAATTTCACCGGGTTGGACagcattttatttcaatttctcaCT
GGGGTTGAGATCACACACCTTAAATTGCCTGGGATGAGTCATTTCTTTAC
TGGTGCttaaatttaggctattttagagcatttttttCACCGGGTTATTC
ACCGAGGCGGatctgaccgggtcactgattCAGGGGTGTATGGTNTCAGC
TTCAATTGCCTGGGGTGAGTAATTTCTTCACTGGTGCttaaatttaggct
attttagagcatttttttCACCGGGTTATTCACCGAGGCGGatctgaccg
ggtcactgattCAGGGGTGTATGGTTAGTTTAGCTCGTCAAGATGACAAA
TTACGTTATATTACGTTTTTTGAGAACACttaatattttttacatttttc
acttCAAAAACTTAAACTCAATATCATATGGGAACAGATTTTTCAGCTCG
TTCATaaccaaaaaaattggaaaaccaAGACGCCAATTATTGAGTGACAG
CGTCATCTCTCTTTCAATTTCTTCGTCAATCAAAACAAGGCAACATCttt
tgacgacgtgacgttaaTCTGGGAACCTAAACTTGAGCATATCCAAGACA
GCTTGTGTGTGTTCTTGATAGTTTAAAATTAATAAGAAATCGAAGATAGG
GAAAGCTGTTTTGAGTTGTAAAGATATTCGAAAACTGCGAAATTAAAATC
ATTGCGAAGTTTTCATGCAagaaagtttttgccaaaaattctcGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048776-exon-scaffold_146-1491911889:39343..40338 | TCONS_00048776-exon-scaffold_146-1491911889:39343..40338 | Clytia hemisphaerica | exon |
| TCONS_00048776-exon-scaffold_146-1510915933:39343..40338 | TCONS_00048776-exon-scaffold_146-1510915933:39343..40338 | Clytia hemisphaerica | exon |
| TCONS_00048776-exon-scaffold_146-1575043694:39343..40338 | TCONS_00048776-exon-scaffold_146-1575043694:39343..40338 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_146 | supercontig | scaffold_146:39343..40338 . |
Blast
The following BLAST results are available for this feature:
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