TCONS_00048757 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048757
Unique NameTCONS_00048757
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048757 ID=TCONS_00048757|Name=TCONS_00048757|organism=Clytia hemisphaerica|type=transcript|length=2157bp
AtacaaaagagaaaacaaaaattgagaatGAATGATACAGGATTTAATGA
AGTAGAGGTGTTAAAGACAAGAGCAAGGGAGTATATCAAGCTTGATAATG
AGGAACAGTCAAAACCAAAGCTGAAAAGAACATCAAGAAATAAGAACTAT
TTTCTTTGCAAAGAACATCACACATTACCTCAGGTGTGGAAAGAGGAATG
CAATAAATgcgaaaattgtttgaaaattgaaattcttgAGTGTCTTCCTC
TGGGTGTTTTGCCAAATGGGCTTGAAGTTTTGGAATATTTGCTCActgtc
aaaatgtcaaacccTGGCGCAAGAGATAACTTTGAACGTAAAGTTGCAAA
AGATGTTGTCCTGCAATGGATTTTCTGCAATGTATACCCCAAAGACGTAA
GATCAGTGGAAAAAgatattattttgttatttgatAACTTTACAACATTG
AAGAAAAGAAGCAATTCAAGTAAATCGAGCGAATATTGGAAAAGATATGA
GCGATTTGTCAACAAACAAAGGCATTTGTTCGACATTATTGgTTCAAGAG
AAAGAATAAAGGTGCAAGAAAGCCTATGGGATGTCAAGATGTGTGAAAGA
GACTGGATTTTTTACAGTAATCAGAACCAAACCCCCCGGAAAGACTTCTG
TTCAACTTACACTGATAGAAAGTGGGAAATAAGCCACAACCGGAAACTTG
AAAGACTAAATCGATCAACGAACCAATCCTACTCTGAAGAGTTCTTTCAA
AACAACTCCCATCAGGAAATATCTGAATCCGAAGGAGAGGAGGACATCAT
GGATGATGATTTTCAACCTGAAGAGCCTCTGAAGAAgagaccaaaatttc
aatatgtACCAGTCTTCAGCAATATCAGCAATGATCCACTCCCATTAGAA
TACAGGCATATTCGTTCCGGTCTTCAAAGCGTTCGTCCAGAATACTATGT
TCTGattgaaaaattcatttctGTCTACCACATGTCGTATGAGCAGGCAG
AAGCTGCTGTGAGAGAAACTGCAAATGACTTATTTGGAAGAAATGAGTTT
GGGAAATGGAAGTCATACAGTCGTGATGTAGAAATAGATGACAACACTCT
ACCAAtgagaaaaaattcaagagtAAATTCAAAACTATTTGAGGCTATGG
CTTTGGGTCTTCTTGTTGAGGACATTATGGAGGATAAAACAAACAGTACA
TGTATTGTCTACTCAAATGATGGTTCAGGGATGAATCAAGTTGGAAGCTA
TGTTGTGCAGTCACTGTCCATAAATGGAGTCCGAAGATCACTTCCAACCT
TTGgtgttttttctgaaacaaaagaGACATTAAAAGATCTGCAAATAACA
ACATTTGATATCCTGTCTGCGTCAAGCAATAGGAAGTACAGCAACAAAGA
tatattgaagaaaatttcctttgtgaTGTCAGATAGCACTGCACATAACA
TTGGTGTTATTGAGTCTGTTTGTGAAGAACTGGCTATTGATGATGTTCCA
AAAACCTTGCTTTGCAATGTCCACCCGCTGATGATGTTTGATAGGAAGAT
AAGAGAGCTTTGTCAGGAGATTCACAATCATCTTGGCGGGAAGAAATTGG
CAGATTGTTTCTATGTTGATGTTGACTTTCGGAGAGAATCTTTTCCCATC
AAGGCAGTGAAATGCCTCTCAAATTTCATTTGCAAAGATTTCTCAGCAAA
GCCTTGGAACTACAGCACTCACTTTGGGGAATTTATCCAACCAAAGGAGA
ATGTCTCACTTTCATTGAAAGATTCCAGATTCAACAGACTGCCTGTGTGC
TGCATCAGCTTGATCTATCTGATTGATGACATTGCTGCCTACCTTGAAAA
GTATTCTGACATCCTAAACAACATTGCCATCATCGACAGAAGTTTTGTAC
AGATGGAAATCCTTAAACCAATTTTTGCTGCCATCTCTTTACTTGGCATC
CATGTGACAATACCGTATCACGCATTGTTGATGAACACAGAGACAAATTA
TTCACTGATCTTGAAAAGCTTTTCTCAACTTTACAAAGAGCTGACAGAGA
TACAAACTTCCTGCCTCCTCACATTGGACAGAGTCTTTACCTTTGTTTCT
GAAGACACATTCCAAAATTCCCTTCCAAAGAAGAAATTTCTATTAGAATC
GCTGCAG
Run BLAST on NCBI

protein sequence of TCONS_00048757-protein

>TCONS_00048757-protein ID=TCONS_00048757-protein|Name=TCONS_00048757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=719bp
IQKRKQKLRMNDTGFNEVEVLKTRAREYIKLDNEEQSKPKLKRTSRNKNY
FLCKEHHTLPQVWKEECNKCENCLKIEILECLPLGVLPNGLEVLEYLLTV
KMSNPGARDNFERKVAKDVVLQWIFCNVYPKDVRSVEKDIILLFDNFTTL
KKRSNSSKSSEYWKRYERFVNKQRHLFDIIGSRERIKVQESLWDVKMCER
DWIFYSNQNQTPRKDFCSTYTDRKWEISHNRKLERLNRSTNQSYSEEFFQ
NNSHQEISESEGEEDIMDDDFQPEEPLKKRPKFQYVPVFSNISNDPLPLE
YRHIRSGLQSVRPEYYVLIEKFISVYHMSYEQAEAAVRETANDLFGRNEF
GKWKSYSRDVEIDDNTLPMRKNSRVNSKLFEAMALGLLVEDIMEDKTNST
CIVYSNDGSGMNQVGSYVVQSLSINGVRRSLPTFGVFSETKETLKDLQIT
TFDILSASSNRKYSNKDILKKISFVMSDSTAHNIGVIESVCEELAIDDVP
KTLLCNVHPLMMFDRKIRELCQEIHNHLGGKKLADCFYVDVDFRRESFPI
KAVKCLSNFICKDFSAKPWNYSTHFGEFIQPKENVSLSLKDSRFNRLPVC
CISLIYLIDDIAAYLEKYSDILNNIAIIDRSFVQMEILKPIFAAISLLGI
HVTIPYHALLMNTETNYSLILKSFSQLYKELTEIQTSCLLTLDRVFTFVS
EDTFQNSLPKKKFLLESLQ
Run BLAST on NCBI

transcript from alignment at scaffold_146:354221..356796-

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048757 ID=TCONS_00048757|Name=TCONS_00048757|organism=Clytia hemisphaerica|type=transcript|length=2576bp|location=Sequence derived from alignment at scaffold_146:354221..356796- (Clytia hemisphaerica)
ATACAAAAGAGAAAACAAAAATTGAGAATGAATGATACAGGATTTAATGA
AGTAGAGGTGTTAAAGACAAGAGCAAGGGAGTATATCAAGCTTGATAATG
AGGAACAGTCAAAACCAAAGCTGAAAAGAACATCAAGAAATAAGAACTAT
TTTCTTTGCAAAGAACATCACACATTACCTCAGGTGTGGAAAGAGGAATG
CAATAAATGCGAAAATTGTTTGAAAATTGAAATTCTTGAGTGTCTTCCTC
TGGGTGTTTTGCCAAATGGGCTTGAAGTTTTGGAATATTTGCTCACTGTC
AAAATGTCAAACCCTGGCGCAAGAGATAACTTTGAACGTAAAGTTGCAAA
AGATGTTGTCCTGCAATGGATTTTCTGCAATGTATACCCCAAAGACGTAA
GATCAGTGGAAAAAGATATTATTTTGTTATTTGATAACTTTACAACATTG
AAGAAAAGAAGCAATTCAAGTAAATCGAGCGAATATTGGAAAAGATATGA
GCGATTTGTCAACAAACAAAGGCATTTGTTCGACATTATTGGTGAGTTTT
TCATCTTTGTTACAATAGTATAGCATGTGTATAGTCGATAAATCTTATTA
TAACTGTTTCTGCACTAACCTATTTTGGGTGATTAAACTAATTTTTGGTT
ATTTTTAGGTTCAAGAGAAAGAATAAAGGTGCAAGAAAGCCTATGGGATG
TCAAGATGTGTGAAAGAGACTGGATTTTTTACAGTAATCAGAACCAAACC
CCCCGGAAAGACTTCTGTTCAACTTACACTGATAGAAAGTGGGAAATAAG
GTAGGTTTATATCCCAAGGATATCACTTTGTAAAACGAGTCATTTCCAAG
AAGGGCTCAAAAGTGTAAAACAACAGGCTTTCATACTTATTATTCTGAAT
GAGGTTCTATGATATGAGTCCAACACTTTATTCATTTTAGCCACAACCGG
AAACTTGAAAGACTAAATCGATCAACGAACCAATCCTACTCTGAAGAGTT
CTTTCAAAACAACTCCCATCAGGAAATATCTGAATCCGAAGGAGAGGAGG
ACATCATGGATGATGATTTTCAACCTGAAGAGCCTCTGAAGAAGAGACCA
AAATTTCAATATGTACCAGTCTTCAGCAATATCAGCAATGATCCACTCCC
ATTAGAATACAGGCATATTCGTTCCGGTCTTCAAAGCGTTCGTCCAGAAT
ACTATGTTCTGATTGAAAAATTCATTTCTGTCTACCACATGTCGTATGAG
CAGGCAGAAGCTGCTGTGAGAGAAACTGCAAATGACTTATTTGGAAGAAA
TGAGTTTGGGAAATGGAAGTCATACAGTCGTGATGTAGAAATAGATGACA
ACACTCTACCAATGAGAAAAAATTCAAGAGTAAATTCAAAACTATTTGAG
GCTATGGCTTTGGGTCTTCTTGTTGAGGACATTATGGAGGATAAAACAAA
CAGTACATGTATTGTCTACTCAAATGATGGTTCAGGGATGAATCAAGTTG
GAAGCTATGTTGTGCAGTCACTGTCCATAAATGGAGTCCGAAGATCACTT
CCAACCTTTGGTGTTTTTTCTGAAACAAAAGAGACATTAAAAGATCTGCA
AATAACAACATTTGATATCCTGTCTGCGTCAAGCAATAGGAAGTACAGCA
ACAAAGATATATTGAAGAAAATTTCCTTTGTGATGTCAGATAGCACTGCA
CATAACATTGGTGTTATTGAGTCTGTTTGTGAAGAACTGGCTATTGATGA
TGTTCCAAAAACCTTGCTTTGCAATGTCCACCCGCTGATGATGTTTGATA
GGAAGATAAGAGAGCTTTGTCAGGAGATTCACAATCATCTTGGCGGGAAG
AAATTGGCAGATTGTTTCTATGTTGATGTTGACTTTCGGAGAGAATCTTT
TCCCATCAAGGCAGTGAAATGCCTCTCAAATTTCATTTGCAAAGATTTCT
CAGCAAAGCCTTGGAACTACAGCACTCACTTTGGGGAATTTATCCAACCA
AAGGAGAATGTCTCACTTTCATTGAAAGATTCCAGATTCAACAGACTGCC
TGTGTGCTGCATCAGCTTGATCTATCTGATTGATGACATTGCTGCCTACC
TTGAAAAGTATTCTGACATCCTAAACAACATTGCCATCATCGACAGAAGT
TTTGTACAGATGGAAATCCTTAAACCAATTTTTGCTGCCATCTCTTTACT
TGGTTAGTACTGTTGGTAGTTTTAATCAAGTTTAACCATTGGAAGCTCAT
TTTGTAATGATGTGTTTTAACAATTGTATTTGCTTCACTATGGCCACTGG
TTGTTAATTATGTAATGTGAAGTCCTTTAGGCAGTATATCATAACTTTCA
CTATTCATTTCTAGGCATCCATGTGACAATACCGTATCACGCATTGTTGA
TGAACACAGAGACAAATTATTCACTGATCTTGAAAAGCTTTTCTCAACTT
TACAAAGAGCTGACAGAGATACAAACTTCCTGCCTCCTCACATTGGACAG
AGTCTTTACCTTTGTTTCTGAAGACACATTCCAAAATTCCCTTCCAAAGA
AGAAATTTCTATTAGAATCGCTGCAG

Coding sequence (CDS) from alignment at scaffold_146:354221..356796-

>TCONS_00048757 ID=TCONS_00048757|Name=TCONS_00048757|organism=Clytia hemisphaerica|type=CDS|length=8628bp|location=Sequence derived from alignment at scaffold_146:354221..356796- (Clytia hemisphaerica)
GCATCCATGTGACAATACCGTATCACGCATTGTTGATGAACACAGAGACA
AATTATTCACTGATCTTGAAAAGCTTTTCTCAACTTTACAAAGAGCTGAC
AGAGATACAAACTTCCTGCCTCCTCACATTGGACAGAGTCTTTACCTTTG
TTTCTGAAGACACATTCCAAAATTCCCTTCCAAAGAAGAAATTTCTATTA
GAATCGCTGCAGCCACAACCGGAAACTTGAAAGACTAAATCGATCAACGA
ACCAATCCTACTCTGAAGAGTTCTTTCAAAACAACTCCCATCAGGAAATA
TCTGAATCCGAAGGAGAGGAGGACATCATGGATGATGATTTTCAACCTGA
AGAGCCTCTGAAGAAGAGACCAAAATTTCAATATGTACCAGTCTTCAGCA
ATATCAGCAATGATCCACTCCCATTAGAATACAGGCATATTCGTTCCGGT
CTTCAAAGCGTTCGTCCAGAATACTATGTTCTGATTGAAAAATTCATTTC
TGTCTACCACATGTCGTATGAGCAGGCAGAAGCTGCTGTGAGAGAAACTG
CAAATGACTTATTTGGAAGAAATGAGTTTGGGAAATGGAAGTCATACAGT
CGTGATGTAGAAATAGATGACAACACTCTACCAATGAGAAAAAATTCAAG
AGTAAATTCAAAACTATTTGAGGCTATGGCTTTGGGTCTTCTTGTTGAGG
ACATTATGGAGGATAAAACAAACAGTACATGTATTGTCTACTCAAATGAT
GGTTCAGGGATGAATCAAGTTGGAAGCTATGTTGTGCAGTCACTGTCCAT
AAATGGAGTCCGAAGATCACTTCCAACCTTTGGTGTTTTTTCTGAAACAA
AAGAGACATTAAAAGATCTGCAAATAACAACATTTGATATCCTGTCTGCG
TCAAGCAATAGGAAGTACAGCAACAAAGATATATTGAAGAAAATTTCCTT
TGTGATGTCAGATAGCACTGCACATAACATTGGTGTTATTGAGTCTGTTT
GTGAAGAACTGGCTATTGATGATGTTCCAAAAACCTTGCTTTGCAATGTC
CACCCGCTGATGATGTTTGATAGGAAGATAAGAGAGCTTTGTCAGGAGAT
TCACAATCATCTTGGCGGGAAGAAATTGGCAGATTGTTTCTATGTTGATG
TTGACTTTCGGAGAGAATCTTTTCCCATCAAGGCAGTGAAATGCCTCTCA
AATTTCATTTGCAAAGATTTCTCAGCAAAGCCTTGGAACTACAGCACTCA
CTTTGGGGAATTTATCCAACCAAAGGAGAATGTCTCACTTTCATTGAAAG
ATTCCAGATTCAACAGACTGCCTGTGTGCTGCATCAGCTTGATCTATCTG
ATTGATGACATTGCTGCCTACCTTGAAAAGTATTCTGACATCCTAAACAA
CATTGCCATCATCGACAGAAGTTTTGTACAGATGGAAATCCTTAAACCAA
TTTTTGCTGCCATCTCTTTACTTGGTTCAAGAGAAAGAATAAAGGTGCAA
GAAAGCCTATGGGATGTCAAGATGTGTGAAAGAGACTGGATTTTTTACAG
TAATCAGAACCAAACCCCCCGGAAAGACTTCTGTTCAACTTACACTGATA
GAAAGTGGGAAATAAGATACAAAAGAGAAAACAAAAATTGAGAATGAATG
ATACAGGATTTAATGAAGTAGAGGTGTTAAAGACAAGAGCAAGGGAGTAT
ATCAAGCTTGATAATGAGGAACAGTCAAAACCAAAGCTGAAAAGAACATC
AAGAAATAAGAACTATTTTCTTTGCAAAGAACATCACACATTACCTCAGG
TGTGGAAAGAGGAATGCAATAAATGCGAAAATTGTTTGAAAATTGAAATT
CTTGAGTGTCTTCCTCTGGGTGTTTTGCCAAATGGGCTTGAAGTTTTGGA
ATATTTGCTCACTGTCAAAATGTCAAACCCTGGCGCAAGAGATAACTTTG
AACGTAAAGTTGCAAAAGATGTTGTCCTGCAATGGATTTTCTGCAATGTA
TACCCCAAAGACGTAAGATCAGTGGAAAAAGATATTATTTTGTTATTTGA
TAACTTTACAACATTGAAGAAAAGAAGCAATTCAAGTAAATCGAGCGAAT
ATTGGAAAAGATATGAGCGATTTGTCAACAAACAAAGGCATTTGTTCGAC
ATTATTGGCATCCATGTGACAATACCGTATCACGCATTGTTGATGAACAC
AGAGACAAATTATTCACTGATCTTGAAAAGCTTTTCTCAACTTTACAAAG
AGCTGACAGAGATACAAACTTCCTGCCTCCTCACATTGGACAGAGTCTTT
ACCTTTGTTTCTGAAGACACATTCCAAAATTCCCTTCCAAAGAAGAAATT
TCTATTAGAATCGCTGCAGCCACAACCGGAAACTTGAAAGACTAAATCGA
TCAACGAACCAATCCTACTCTGAAGAGTTCTTTCAAAACAACTCCCATCA
GGAAATATCTGAATCCGAAGGAGAGGAGGACATCATGGATGATGATTTTC
AACCTGAAGAGCCTCTGAAGAAGAGACCAAAATTTCAATATGTACCAGTC
TTCAGCAATATCAGCAATGATCCACTCCCATTAGAATACAGGCATATTCG
TTCCGGTCTTCAAAGCGTTCGTCCAGAATACTATGTTCTGATTGAAAAAT
TCATTTCTGTCTACCACATGTCGTATGAGCAGGCAGAAGCTGCTGTGAGA
GAAACTGCAAATGACTTATTTGGAAGAAATGAGTTTGGGAAATGGAAGTC
ATACAGTCGTGATGTAGAAATAGATGACAACACTCTACCAATGAGAAAAA
ATTCAAGAGTAAATTCAAAACTATTTGAGGCTATGGCTTTGGGTCTTCTT
GTTGAGGACATTATGGAGGATAAAACAAACAGTACATGTATTGTCTACTC
AAATGATGGTTCAGGGATGAATCAAGTTGGAAGCTATGTTGTGCAGTCAC
TGTCCATAAATGGAGTCCGAAGATCACTTCCAACCTTTGGTGTTTTTTCT
GAAACAAAAGAGACATTAAAAGATCTGCAAATAACAACATTTGATATCCT
GTCTGCGTCAAGCAATAGGAAGTACAGCAACAAAGATATATTGAAGAAAA
TTTCCTTTGTGATGTCAGATAGCACTGCACATAACATTGGTGTTATTGAG
TCTGTTTGTGAAGAACTGGCTATTGATGATGTTCCAAAAACCTTGCTTTG
CAATGTCCACCCGCTGATGATGTTTGATAGGAAGATAAGAGAGCTTTGTC
AGGAGATTCACAATCATCTTGGCGGGAAGAAATTGGCAGATTGTTTCTAT
GTTGATGTTGACTTTCGGAGAGAATCTTTTCCCATCAAGGCAGTGAAATG
CCTCTCAAATTTCATTTGCAAAGATTTCTCAGCAAAGCCTTGGAACTACA
GCACTCACTTTGGGGAATTTATCCAACCAAAGGAGAATGTCTCACTTTCA
TTGAAAGATTCCAGATTCAACAGACTGCCTGTGTGCTGCATCAGCTTGAT
CTATCTGATTGATGACATTGCTGCCTACCTTGAAAAGTATTCTGACATCC
TAAACAACATTGCCATCATCGACAGAAGTTTTGTACAGATGGAAATCCTT
AAACCAATTTTTGCTGCCATCTCTTTACTTGGTTCAAGAGAAAGAATAAA
GGTGCAAGAAAGCCTATGGGATGTCAAGATGTGTGAAAGAGACTGGATTT
TTTACAGTAATCAGAACCAAACCCCCCGGAAAGACTTCTGTTCAACTTAC
ACTGATAGAAAGTGGGAAATAAGATACAAAAGAGAAAACAAAAATTGAGA
ATGAATGATACAGGATTTAATGAAGTAGAGGTGTTAAAGACAAGAGCAAG
GGAGTATATCAAGCTTGATAATGAGGAACAGTCAAAACCAAAGCTGAAAA
GAACATCAAGAAATAAGAACTATTTTCTTTGCAAAGAACATCACACATTA
CCTCAGGTGTGGAAAGAGGAATGCAATAAATGCGAAAATTGTTTGAAAAT
TGAAATTCTTGAGTGTCTTCCTCTGGGTGTTTTGCCAAATGGGCTTGAAG
TTTTGGAATATTTGCTCACTGTCAAAATGTCAAACCCTGGCGCAAGAGAT
AACTTTGAACGTAAAGTTGCAAAAGATGTTGTCCTGCAATGGATTTTCTG
CAATGTATACCCCAAAGACGTAAGATCAGTGGAAAAAGATATTATTTTGT
TATTTGATAACTTTACAACATTGAAGAAAAGAAGCAATTCAAGTAAATCG
AGCGAATATTGGAAAAGATATGAGCGATTTGTCAACAAACAAAGGCATTT
GTTCGACATTATTGGCATCCATGTGACAATACCGTATCACGCATTGTTGA
TGAACACAGAGACAAATTATTCACTGATCTTGAAAAGCTTTTCTCAACTT
TACAAAGAGCTGACAGAGATACAAACTTCCTGCCTCCTCACATTGGACAG
AGTCTTTACCTTTGTTTCTGAAGACACATTCCAAAATTCCCTTCCAAAGA
AGAAATTTCTATTAGAATCGCTGCAGCCACAACCGGAAACTTGAAAGACT
AAATCGATCAACGAACCAATCCTACTCTGAAGAGTTCTTTCAAAACAACT
CCCATCAGGAAATATCTGAATCCGAAGGAGAGGAGGACATCATGGATGAT
GATTTTCAACCTGAAGAGCCTCTGAAGAAGAGACCAAAATTTCAATATGT
ACCAGTCTTCAGCAATATCAGCAATGATCCACTCCCATTAGAATACAGGC
ATATTCGTTCCGGTCTTCAAAGCGTTCGTCCAGAATACTATGTTCTGATT
GAAAAATTCATTTCTGTCTACCACATGTCGTATGAGCAGGCAGAAGCTGC
TGTGAGAGAAACTGCAAATGACTTATTTGGAAGAAATGAGTTTGGGAAAT
GGAAGTCATACAGTCGTGATGTAGAAATAGATGACAACACTCTACCAATG
AGAAAAAATTCAAGAGTAAATTCAAAACTATTTGAGGCTATGGCTTTGGG
TCTTCTTGTTGAGGACATTATGGAGGATAAAACAAACAGTACATGTATTG
TCTACTCAAATGATGGTTCAGGGATGAATCAAGTTGGAAGCTATGTTGTG
CAGTCACTGTCCATAAATGGAGTCCGAAGATCACTTCCAACCTTTGGTGT
TTTTTCTGAAACAAAAGAGACATTAAAAGATCTGCAAATAACAACATTTG
ATATCCTGTCTGCGTCAAGCAATAGGAAGTACAGCAACAAAGATATATTG
AAGAAAATTTCCTTTGTGATGTCAGATAGCACTGCACATAACATTGGTGT
TATTGAGTCTGTTTGTGAAGAACTGGCTATTGATGATGTTCCAAAAACCT
TGCTTTGCAATGTCCACCCGCTGATGATGTTTGATAGGAAGATAAGAGAG
CTTTGTCAGGAGATTCACAATCATCTTGGCGGGAAGAAATTGGCAGATTG
TTTCTATGTTGATGTTGACTTTCGGAGAGAATCTTTTCCCATCAAGGCAG
TGAAATGCCTCTCAAATTTCATTTGCAAAGATTTCTCAGCAAAGCCTTGG
AACTACAGCACTCACTTTGGGGAATTTATCCAACCAAAGGAGAATGTCTC
ACTTTCATTGAAAGATTCCAGATTCAACAGACTGCCTGTGTGCTGCATCA
GCTTGATCTATCTGATTGATGACATTGCTGCCTACCTTGAAAAGTATTCT
GACATCCTAAACAACATTGCCATCATCGACAGAAGTTTTGTACAGATGGA
AATCCTTAAACCAATTTTTGCTGCCATCTCTTTACTTGGTTCAAGAGAAA
GAATAAAGGTGCAAGAAAGCCTATGGGATGTCAAGATGTGTGAAAGAGAC
TGGATTTTTTACAGTAATCAGAACCAAACCCCCCGGAAAGACTTCTGTTC
AACTTACACTGATAGAAAGTGGGAAATAAGATACAAAAGAGAAAACAAAA
ATTGAGAATGAATGATACAGGATTTAATGAAGTAGAGGTGTTAAAGACAA
GAGCAAGGGAGTATATCAAGCTTGATAATGAGGAACAGTCAAAACCAAAG
CTGAAAAGAACATCAAGAAATAAGAACTATTTTCTTTGCAAAGAACATCA
CACATTACCTCAGGTGTGGAAAGAGGAATGCAATAAATGCGAAAATTGTT
TGAAAATTGAAATTCTTGAGTGTCTTCCTCTGGGTGTTTTGCCAAATGGG
CTTGAAGTTTTGGAATATTTGCTCACTGTCAAAATGTCAAACCCTGGCGC
AAGAGATAACTTTGAACGTAAAGTTGCAAAAGATGTTGTCCTGCAATGGA
TTTTCTGCAATGTATACCCCAAAGACGTAAGATCAGTGGAAAAAGATATT
ATTTTGTTATTTGATAACTTTACAACATTGAAGAAAAGAAGCAATTCAAG
TAAATCGAGCGAATATTGGAAAAGATATGAGCGATTTGTCAACAAACAAA
GGCATTTGTTCGACATTATTGGCATCCATGTGACAATACCGTATCACGCA
TTGTTGATGAACACAGAGACAAATTATTCACTGATCTTGAAAAGCTTTTC
TCAACTTTACAAAGAGCTGACAGAGATACAAACTTCCTGCCTCCTCACAT
TGGACAGAGTCTTTACCTTTGTTTCTGAAGACACATTCCAAAATTCCCTT
CCAAAGAAGAAATTTCTATTAGAATCGCTGCAGCCACAACCGGAAACTTG
AAAGACTAAATCGATCAACGAACCAATCCTACTCTGAAGAGTTCTTTCAA
AACAACTCCCATCAGGAAATATCTGAATCCGAAGGAGAGGAGGACATCAT
GGATGATGATTTTCAACCTGAAGAGCCTCTGAAGAAGAGACCAAAATTTC
AATATGTACCAGTCTTCAGCAATATCAGCAATGATCCACTCCCATTAGAA
TACAGGCATATTCGTTCCGGTCTTCAAAGCGTTCGTCCAGAATACTATGT
TCTGATTGAAAAATTCATTTCTGTCTACCACATGTCGTATGAGCAGGCAG
AAGCTGCTGTGAGAGAAACTGCAAATGACTTATTTGGAAGAAATGAGTTT
GGGAAATGGAAGTCATACAGTCGTGATGTAGAAATAGATGACAACACTCT
ACCAATGAGAAAAAATTCAAGAGTAAATTCAAAACTATTTGAGGCTATGG
CTTTGGGTCTTCTTGTTGAGGACATTATGGAGGATAAAACAAACAGTACA
TGTATTGTCTACTCAAATGATGGTTCAGGGATGAATCAAGTTGGAAGCTA
TGTTGTGCAGTCACTGTCCATAAATGGAGTCCGAAGATCACTTCCAACCT
TTGGTGTTTTTTCTGAAACAAAAGAGACATTAAAAGATCTGCAAATAACA
ACATTTGATATCCTGTCTGCGTCAAGCAATAGGAAGTACAGCAACAAAGA
TATATTGAAGAAAATTTCCTTTGTGATGTCAGATAGCACTGCACATAACA
TTGGTGTTATTGAGTCTGTTTGTGAAGAACTGGCTATTGATGATGTTCCA
AAAACCTTGCTTTGCAATGTCCACCCGCTGATGATGTTTGATAGGAAGAT
AAGAGAGCTTTGTCAGGAGATTCACAATCATCTTGGCGGGAAGAAATTGG
CAGATTGTTTCTATGTTGATGTTGACTTTCGGAGAGAATCTTTTCCCATC
AAGGCAGTGAAATGCCTCTCAAATTTCATTTGCAAAGATTTCTCAGCAAA
GCCTTGGAACTACAGCACTCACTTTGGGGAATTTATCCAACCAAAGGAGA
ATGTCTCACTTTCATTGAAAGATTCCAGATTCAACAGACTGCCTGTGTGC
TGCATCAGCTTGATCTATCTGATTGATGACATTGCTGCCTACCTTGAAAA
GTATTCTGACATCCTAAACAACATTGCCATCATCGACAGAAGTTTTGTAC
AGATGGAAATCCTTAAACCAATTTTTGCTGCCATCTCTTTACTTGGTTCA
AGAGAAAGAATAAAGGTGCAAGAAAGCCTATGGGATGTCAAGATGTGTGA
AAGAGACTGGATTTTTTACAGTAATCAGAACCAAACCCCCCGGAAAGACT
TCTGTTCAACTTACACTGATAGAAAGTGGGAAATAAGATACAAAAGAGAA
AACAAAAATTGAGAATGAATGATACAGGATTTAATGAAGTAGAGGTGTTA
AAGACAAGAGCAAGGGAGTATATCAAGCTTGATAATGAGGAACAGTCAAA
ACCAAAGCTGAAAAGAACATCAAGAAATAAGAACTATTTTCTTTGCAAAG
AACATCACACATTACCTCAGGTGTGGAAAGAGGAATGCAATAAATGCGAA
AATTGTTTGAAAATTGAAATTCTTGAGTGTCTTCCTCTGGGTGTTTTGCC
AAATGGGCTTGAAGTTTTGGAATATTTGCTCACTGTCAAAATGTCAAACC
CTGGCGCAAGAGATAACTTTGAACGTAAAGTTGCAAAAGATGTTGTCCTG
CAATGGATTTTCTGCAATGTATACCCCAAAGACGTAAGATCAGTGGAAAA
AGATATTATTTTGTTATTTGATAACTTTACAACATTGAAGAAAAGAAGCA
ATTCAAGTAAATCGAGCGAATATTGGAAAAGATATGAGCGATTTGTCAAC
AAACAAAGGCATTTGTTCGACATTATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030990XLOC_030990Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048757-proteinTCONS_00048757-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048757-exon-scaffold_146-1575043694:356256..356796TCONS_00048757-exon-scaffold_146-1575043694:356256..356796Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1575043694:355997..356138TCONS_00048757-exon-scaffold_146-1575043694:355997..356138Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1575043694:354595..355856TCONS_00048757-exon-scaffold_146-1575043694:354595..355856Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1575043694:354221..354432TCONS_00048757-exon-scaffold_146-1575043694:354221..354432Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1510915933:356256..356796TCONS_00048757-exon-scaffold_146-1510915933:356256..356796Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1510915933:355997..356138TCONS_00048757-exon-scaffold_146-1510915933:355997..356138Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1510915933:354595..355856TCONS_00048757-exon-scaffold_146-1510915933:354595..355856Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1510915933:354221..354432TCONS_00048757-exon-scaffold_146-1510915933:354221..354432Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1491911889:356256..356796TCONS_00048757-exon-scaffold_146-1491911889:356256..356796Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1491911889:355997..356138TCONS_00048757-exon-scaffold_146-1491911889:355997..356138Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1491911889:354595..355856TCONS_00048757-exon-scaffold_146-1491911889:354595..355856Clytia hemisphaericaexon
TCONS_00048757-exon-scaffold_146-1491911889:354221..354432TCONS_00048757-exon-scaffold_146-1491911889:354221..354432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_146supercontigscaffold_146:354221..356796 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0441532	0.14208	0.041242	0.0201744	1.23933	0.834543	0.444883	0.372653	0.230209	0.361191	0.092258	0.206199	0.199249	0.0754736	0.144782	0.155374	0.13672	0.140133	0.0416752	0.263367	0.228914	0.257668	0.0626459	0.194832	2.24869	0.794181	0.349619	0.426426	0.181929	0.267738
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048757 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top