|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048592 ID=TCONS_00048592|Name=TCONS_00048592|organism=Clytia hemisphaerica|type=transcript|length=126bp
TCCATGAAGGGAGCTGCAAGGGGCAAGAATTTAGTGTACGCAAATTTTGG
CCGCGATCAAGATTACCAAAAGTTGATTGAACTGAAAATCAACGTCACTG
ATTGTATTGTTTTGACCAAATATGGT Run BLAST on NCBI transcript from alignment at scaffold_144:42271..43382+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048592 ID=TCONS_00048592|Name=TCONS_00048592|organism=Clytia hemisphaerica|type=transcript|length=1112bp|location=Sequence derived from alignment at scaffold_144:42271..43382+ (Clytia hemisphaerica)
TCCATGAAGGGAGCTGCAAGGGTGAGAttataaccattgagtttcaatga
TCCGACGGTACTCCCATCTTTCCTCGCTTACTCCATAAAGGGAGAAGAAA
GGGTAAGATtttaaccattgagtttcaataaTCCAACGGCACTCCCTCCT
TTCCTCGCTTACTCCATGAAGGGAGCTGCCAGGATAAGATTATTGAGTTT
CAATAATCCAACGGCACTCCCTCCTTTCCTCGCTTACTCCATGAAGGGAG
CTGCAAGGGTGAGAttataaccattgagtttcaataaTCCAACGGTACTC
CCATCTTTCCTCGCTTACTCAATGAAGGGGGAAGAAAGGGTGACATTATA
ATCATAATTCCCAACACAATAACGTCTTCTCTGTCCATAACATagacaat
attttataaatctaaattatttcgtagaCGTCGATAGACCTgtaaaatat
aattctatgaataagcGAGCCGCGAAACCACTTTAGGATAtaggcttcaa
atcctataTACGAATTTCGATTCAAACCCTCTGCTGTACCTTATTCATTA
TAACCTATACTTGAACACTTTTGCATCGCTCATTTCAAAGTGCGGCCTGC
GTTTCAGGGAACTTGTCAGGGAATCACATTTATCCCTCgcataaaagaaa
aaaagcgcccaaatacacaggttgcaaaattaaagtctgaagaaaATCAC
GCCTTTACTCGAAAATTTTATGTGCTTTCTACaagacatttatttctgat
tggttcgaatttattgacactaataaagttatcagctgtaagttgtaaag
caagtaaattgggaataaaatcacatgttttgactacATTCATATAactt
tgcaacccgtgtattcacTATTTTGTCAAATAACTTTTCCATTTGTGATT
GTGTCCCGGGGATGggctacttaggcaaaaatgggtgctgggtatctGCA
GACGGTAAAAGTCGGTTGTTTTACCTTTGATCATGAAAAATTATATCCAT
TTTATAGGGCAAGAATTTAGTGTACGCAAATTTTGGCCGCGATCAAGATT
ACCAAAAGTTGATTGAACTGAAAATCAACGTCACTGATTGTATTGTTTTG
ACCAAATATGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048592-exon-scaffold_144-1491911889:42271..42291 | TCONS_00048592-exon-scaffold_144-1491911889:42271..42291 | Clytia hemisphaerica | exon |
| TCONS_00048592-exon-scaffold_144-1510915933:42271..42291 | TCONS_00048592-exon-scaffold_144-1510915933:42271..42291 | Clytia hemisphaerica | exon |
| TCONS_00048592-exon-scaffold_144-1575043694:42271..42291 | TCONS_00048592-exon-scaffold_144-1575043694:42271..42291 | Clytia hemisphaerica | exon |
| TCONS_00048592-exon-scaffold_144-1491911889:43278..43382 | TCONS_00048592-exon-scaffold_144-1491911889:43278..43382 | Clytia hemisphaerica | exon |
| TCONS_00048592-exon-scaffold_144-1510915933:43278..43382 | TCONS_00048592-exon-scaffold_144-1510915933:43278..43382 | Clytia hemisphaerica | exon |
| TCONS_00048592-exon-scaffold_144-1575043694:43278..43382 | TCONS_00048592-exon-scaffold_144-1575043694:43278..43382 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_144 | supercontig | scaffold_144:42271..43382 + |
Blast
The following BLAST results are available for this feature:
|
