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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048551 ID=TCONS_00048551|Name=TCONS_00048551|organism=Clytia hemisphaerica|type=transcript|length=1682bp
GAAATTTGCAGATTTGAAATCAGCGAGGGTTCAAATTAGACTTGATTTGA
TTTACACGTAAACTGCTACTGATTTTCAAGACATCTCAAGAGCTTtcaaa
aggGAAGAGGCGAAAATGTCAATCTCAATTGGGGGAGCAGTTTCTAGttt
caataaaagaaacatgtcgGCTCCGTCTCTTTTCCCGCAAGATCCGCGGA
GCGCGTTATCACGCGAATGCTTGGAGCGCATCGCTCGCGTCAACAACACA
ACGGCGGCTTCGTCAAATACGTCACCAAGTCATCGTGTCAAGTTCGCCGC
ACAAGCACAAAATGATAACAGTAACATCATTACTATCAATGTATCAGGTA
GACGTTACCAAACTTACCTAACAACATTGCAACGTTTCCCGTCCAGCTTA
CTGGGTGATCCGATGAAGAGGAAAAACTTTTAcaatcaagaaaacaaaga
atACTTCTTCGACCGAAACCGCAAAGCATTCAGTGGTGTCTTACACTATT
ATCAAACACATGGAGACGAGATTGAATGCCCGACTGGAGTATCAGAAAAA
ACCTTCGCACAAGAACTCTTATTTTTCGAACTTTTTGATCAAAAGACGAA
TGATGTTGATAGTATTATGAGCAGTACTGAATTTCTTGTACCAAAGAATG
TAACATTAGCAAAAATCTGGATCTTATTCGAAAAACCGAATTCGTCACCG
AGTGCGAGAATATTAGCTGTTTTTTCAATATCAATCATTCTACTCTCAAT
AACGGTCTTTTGTTTAGAAACTGTACCCGCATTGAATCCAGACCATCAAG
AAGGAAAACACATGTCATCGACCTGGTATTTACTAAATGTCGTTTGTAAC
GCCTGGTTTACACTTGAATTTGTGATTCGTTTCGTAGCAGCCCCAAACAA
ATTAGACTTCATGAAATCAGCAGTTAATCTCATAGACTTGATTTCCATCC
TACCTTTCTATATAAGCGAACTTATTGGTCATGCATCAGATAACTCACTC
GCCGTTCTGCGAGTTATCCGAGTTATTCGAGTTATACGAATCTTCAAATT
AACTCGCCATTCACGAGGACTTCATATACTAGCGAACACCATCAAAGCTA
GTTTTCAAGAACTGATTATGTTGGTGTTGTTTCTTGCCATAGCTATTATC
CTTTTTGCTAGTGCAGTATATTTTGCTGAGTCTGCAGGTGGTCACCCTGA
CAACAAGTTTCGAAGTATACCTCACAGTTTTTGGTGGGCTGTTATTACCA
TGACTACCGTTGGTTATGGTGATTTAACGCCGAAGACATTGATTGGACAA
ATGGTTGGTACATTATGTGCTATATCCGGTGTTTTGGTTATTGCGTTGCC
TGTACCAGTAATCGTTGGTAACTTCGAAAGATATTATAAACTGGAGCGAA
GTCGTCATGCACGTGAAACAGAAGTTATcaggaaagaaaaagaagaagag
acaTTTGCGGACATGCGCAGATCCATCCAAATGATGACTCATACGTCAAT
CATCCTTGCGGGGGGCGTCAAAAGACATTGTCCGAATGGTActgaacaac
aacaaaacaatacaCCGAATAACGATAATAACAATAACGATAAAAAATCC
AATCTAATTTATCCGCACAGTCCTAACAAACGAAAAACATTCAAAGAAAG
AATTCAAGACAAGTTAGCGTTCACATTTCAAC Run BLAST on NCBI transcript from alignment at scaffold_143:318093..326892- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048551 ID=TCONS_00048551|Name=TCONS_00048551|organism=Clytia hemisphaerica|type=transcript|length=8800bp|location=Sequence derived from alignment at scaffold_143:318093..326892- (Clytia hemisphaerica)
GAAATTTGCAGATTTGAAATCAGCGAGGGTTCAAATTAGACTTGATTTGA
TTTACACGTAAACTGCTACTGATTTTCAAGACATCTCAAGAGCTTTCAAA
AGTGAGTTTTTTTTCTGTTATCAAATTCTGACTTCACAAAAAAATTTTCA
AATACATTTTTTCATAACGAACCCTAAAGACTGCTCATAAGAATTTTCTT
GTCTTTCTCTTTATAACGTTATTTACAAGAACTCTAGAAACCCTTGACCA
GATTTATGATGTTGAAAGTTGAGAAACAAAGGAGATCTCTCAGATTGCCT
TATGGAATACATATATCAACCCTTCGCGGCGCGGTCGGCTTTTGACGATG
TGATGATGGATGTGCCGTTGGGAGGGAGGTATTACATACAAACATTGTCA
GCTTGCATAAGCAAGTGCACCCTTTTTACACATTTCAAATACATACAAGT
TTCGACCCACTTTTCCTTTTACTTGAATCGTGAAATTAGTTCCACGGTTT
GCGCCGTATTTGAATCAATCACTTGAATACGAGGAAGACTGATTATATCA
ATGCATACCAAAACTGCTCTTTCTTGCTAGGTTAGGGCTTATTCGAGCTA
ATTCTAGCCTATGAGATCAGATGTTAGAATGTTGGTATAAAACTCTCGTT
AAACTCGGTTAGTTTATTCTCCATCAATAAACGTCCTGCAGATTAATGAA
AAAAATATTTATAGAAAAAGAAGAAAAAATTTAGGTTGATTTAGTTTAAT
AGCCTCTCCTCCTCATTAGGACCCTCTTGGTGGTATGAACGATTTTAAGG
ATAAGAAATTTTTATTTGACCCCTTACCAATATGAATTGATGTAAATATA
TAAAAATATTAAATGTGTTCAGAGATTATTAAAAAGTAACTTAAAACTGA
TCCCCTTTTTCAATGAATGAATGAAGGAAGGTTTTGAAGGGAGTTTAAAT
GAAGCAACAAATGCAATGAAGAATATGGAGAGTCAATATTTTGATGACAA
TTTTCTTTCACCGAAGTTATACACACATCTTGGTACTCTTTTTTTTTGTA
ATTATGCGTAAATCCGATCAATCGCGATAGTCGGCTTCGATTTCCCGATC
TTTCTGGTTTGATTTCCCGATTTCTTTTGCGTTTGCGCTCGCACTTACTA
CTCTTCTAAACTTTATGTTAGATATATTAAGAAAGACTGACCCATGACAA
TCACCGGAGTTTGCAGCAGTCATGCATTACGGCTGTTTTATTTCATTTAT
TCGGTAATTTTTGTTCACGAGGGGAAGGGGGACTCTTCAAAAAAAAAAAC
ATTCAATTTGACCGGTTGGAACCAAATATAAATTGACATTTTTAATGAAA
ATATCTATGGCCTCTTGGACAACTGATGAAATAATTGTTTTTTGATAATA
CCGACGCTAGCATGACAGGAAAAAGTTGCTCTCTGGGATAATTATCACTC
GGAAAGTTGCCCCTCACCCGAGACGATTGCCTCGCGGACAGTTATCCCGG
GACGATTACCCCCTAGGATAACTGTCCCCGAAACTCAGCTCACCGACACC
GTTATATTTTCCGTTCACCGATAAACGCACGAATTTAAACTTTTTACTGA
TAAGACGAGAAAAACAATTCCTAAACCGACAATAAGGCGGAAACCGACTA
CCACTTTTCCATACGCCCATTTCACCAAGTGTTGGAGGGCGGACAACTTT
AAGTGTCAAAGGTCTATAGGGGACCATATTGGTACCAGAAAATTTCTCGA
TTTTCACAAATTTCAGCCCTTTTCGCGAAAGTAAATGTCTTTGAAAAGGG
AAATCCGCGAAAGATTATTGTTAGCGAAAATTTCTTGACAAAATAGAAAA
TCTGTAAAACTTCTAATTTAAATTAAAATGAACAAAACCAATTCAATTTT
CAAAAAATTTTATAAATAATTTAAAGTCGAATCTCGCTAATTCGAACTAG
TTCGGGGGAATCTTACTTGTTCGAATTACAGAGAGATTCGGATTATAGAA
AGTATTTTAAGAGGGTTTCTCCTTGACAGGAAGTGAAAACAAGATTTGAA
TAAGCGAGAGTCTACTGTATTCTGCAAAGCTCCATTTATTGTAAAGACTC
AAAATAAGCCGAGAACGATCTTCAAATAACACAGTACCAAACAGGGCCAC
TACCAACTAGAAAGGCGCCTCAAAATCGTCATCATTTCCATCCTAAATTT
TGAAAATACTTAAGACTATTTAGCCTCAGAACCATGTTTTAGGCTGTTAA
CAACAGTTTCATTACCAGATCACTGATACAGGGGTGGCAAGGAAGTTCTG
ACATAATCCTGTCTTGTGACTGTTCTATGATACTTTGAGGTATGGCGGAT
TGANTCTGACATAATCCTGTCTTGTGACTGTTCTATGATACTTTGGGGTA
TGGCGGATTGAAAAGTCTTTTGTCTACAATTACAGTTAATTTCCTTCCGA
CACACTGATGCTCTGAAAATCTTCAATAATTTGATGACGAAATTTCACCT
GACATCACAGCGTCAGATAATACCCCACGGGGAATGCTGATACACCAATG
GACAAATCCCATTTGGCACACGACGTTGTTTCAACGTTCATCTAACGTTG
TGAATATTAGATGGCCGTTGAAACAACGTTGTGTGCCACCATTGGACAAC
TATTATCCTTCTCTCCGTTAGCATAAACACTCAGAGCTTTAGCGTGAGCC
GGATCGCCTTCGGATAATATATTCGACGATGTTCAAGCGCTTATAAATCG
GCGTTTACTATTGCACTTTTTCAAATCTCTAGTCATTGAAGATTAAAAGT
TAGGTCATTTTACATAGAGTCATTCCAGAGCTGATATTTAGTCTAGGATT
CTAATTGACTATTCTTCTATTGTGCAATTTGGGCTCAAAAATATCCCTTA
ATTTATTATTTTACTAAGAAAACTGTGGAGTATTATTTCATAAAAATTGA
AATTGAAATAATATGAAAGAAAAAGATTTCTAATATTTTATATGTGATGT
TTTATACAGAATATTTCATTCAAAATATTTTTAAAGCAAAGAAAGTGTGG
TTTTATTTCTTGATATTTCTCCTTCTCCTTTCGAATGGTGTACACGCTTT
TTTATAAGAACAATTTAGAAAAAACATGACTCTCAATTTTCGCTAAAACT
TAAAAACAATCGTAGTCTTTGATTTGCGAAACGACTATAAAAATGTTGAA
ATCATGCCCCTTTTACGCTAAAGCACTAATACTAATAGTAGCCATACGAA
AAAAGAGAGCATTTAAGTCTCAAAATCACGAGAGAAAAAGAAAAGATCAG
CAGAGCCTCCAAAATTTAATAGTTCTTATAAAAAATTGTGAACCCTGAAG
GAAACTTTGGTACAGACTCCATTCTCAATCTTCTATAAGAATAAACAAGA
AACTCCCGTTCAGAATTTAGAATGAAAATACGTTGGAAGTCTAATTCAAA
GTGGTTCAAATTAATGTTCCCTTAATTTTGAAGGATATAAAAGAGAGAAA
AAATATCCCTTCACTTTCAGAATTTTTTGTTGATAATTAAACCTAGTCCC
CTCATAGTATCTTCATTTAAGGATTTTATACTCCATTCTAAACATAAAGG
AAAATTATCCCTTCTAATTCAATATTTTACAAATACATATTATTATTCGC
AATAAAAGGGGTTTACAATCGTCCATAGTTTGGAAGAAATAATTTTGCTT
TTATTTTATGGAAGAACATTTTTTTCAGTTCTTCTTTTTTTGTCAGGGGC
ACAGTAGTGGAAAGAGAAAGTTTGATTTTTAATCCCTTAAATCTGTTTGG
GACCCTCAAACTGTGTGTGTACAGTACGTTAATTCTTTTTTGATTCAAGC
TCAATGAAAAGAAAATAATGAAAAATCTTATTTTTTGAATCAAATTTTTT
CTCCCTATATTATGTAAATGATATTTTCCTCCATTGTTCTTTATTTTGAA
AATAATTTTTTTTTGTTTTTTAGGGGAAGAGGCGAAAATGTCAATCTCAA
TTGGGGGAGCAGTTTCTAGTTTCAATAAAAGAAACATGTCGGCTCCGTCT
CTTTTCCCGCAAGATCCGCGGAGCGCGTTATCACGCGAATGCTTGGAGCG
CATCGCTCGCGTCAACAACACAACGGCGGCTTCGTCAAATACGTCACCAA
GTCATCGTGTCAAGTTCGCCGCACAAGCACAAAATGATAACAGTAACATC
ATTACTATCAATGTATCAGGTAGACGTTACCAAACTTACCTAACAACATT
GCAACGTTTCCCGTCCAGCTTACTGGGTGATCCGATGAAGAGGAAAAACT
TTTACAATCAAGAAAACAAAGAATACTTCTTCGACCGAAACCGCAAAGCA
TTCAGTGGTGTCTTACACTATTATCAAACACATGGAGACGAGATTGAATG
CCCGACTGGAGTATCAGAAAAAACCTTCGCACAAGAACTCTTATTTTTCG
AACTTTTTGATCAAAAGACGAATGATGTTGATAGTATTATGAGCAGTACT
GAATTTCTTGTACCAAAGAATGTAACATTAGCAAAAATCTGGATCTTATT
CGAAAAACCGAATTCGTCACCGAGTGCGAGAATATTAGCTGTTTTTTCAA
TATCAATCATTCTACTCTCAATAACGGTCTTTTGTTTAGAAACTGTACCC
GCATTGAATCCAGACCATCAAGAAGGAAAACACATGTCATCGACCTGGTA
TTTACTAAATGTCGTTTGTAACGCCTGGTTTACACTTGAATTTGTGATTC
GTTTCGTAGCAGCCCCAAACAAATTAGACTTCATGAAATCAGCAGTTAAT
CTCATAGACTTGATTTCCATCCTACCTTTCTATATAAGCGAACTTATTGG
TCATGCATCAGATAACTCACTCGCCGTTCTGCGAGTTATCCGAGTTATTC
GAGTTATACGAATCTTCAAATTAACTCGCCATTCACGAGGACTTCATATA
CTAGCGAACACCATCAAAGCTAGTTTTCAAGAACTGATTATGTTGGTGTT
GTTTCTTGCCATAGCTATTATCCTTTTTGCTAGTGCAGTATATTTTGCTG
AGTCTGCAGGTGGTCACCCTGACAACAAGTTTCGAAGTATACCTCACAGT
TTTTGGTGGGCTGTTATTACCATGACTACCGTTGGTAAGTAGCCTATTTT
CAAACATATTGAATGCTACAGGAGGCCGACAAAAGAATCTCTAGAGCTTA
AGTTTTTCCGTAAATTTAATACACTTTTTGTCGATTAGGCTCGTCATCAC
TTTATTAGCAACTCCCTATAGCCTTTATCTCAACTCTCCATAAAACGAAC
GAGTTCGCGTATTCTCTGAGCAGTCGAGTTAAGGGGAGGTTGTAAAATGG
AGCTTGCATCGAATGATTTAATTTGAAACTCTGATTTGAAGCTCATCTTT
CATATTTGAATCTGACATCCAAGCGATGTATTTCATCCCAAGGGCTGGTA
CAAGGTACAAGCAACATAATGTTTTAGACCTCGATAAATTTCCTGAAGTG
ACTAAAAGGAAGTTTGAATTTTTGAGAATAAGTATTTCGGTATCAGATAG
GGAAAGTTTCAATATTTTGAAAGGATAAAACATTCTGAAAATGCACTAAT
ACGGGATTTTACCGGGGGATTCTTTACCTATCTCGTTTTGCTTTTTGCTG
TCAGTGAAGTGAATAAATTCTGATAAAATCAACGCTTCTTTNGACCTATC
TCGTTTTGCTTTTTTCTGTCAGTGAAGTGAATAAATTCTGATAAAATCAA
CGCTTCTTTCAGGTTATGGTGATTTAACGCCGAAGACATTGATTGGACAA
ATGGTTGGTACATTATGTGCTATATCCGGTGTTTTGGTTATTGCGTTGCC
TGTACCAGTAATCGTTGGTAACTTCGAAAGATATTATAAACTGGTAAGTC
ACCCTGGTTTACACGACCATGAATGGAATATCTAAGGCTCAATTCGATAT
ATGAACAAATATCACATTTCGACGGATCTTACTTGATACTTTCTCCACTG
AAAATCACCCGGTGGGTAAAATTTATCCAAACACTCGTTCAGGGTAACTT
CGAGAGATATTCTAAACTCTGGTAAGTTACCCAAGAGGAAACTCTCGATT
CGGTATATTATAGAAAGATTATAGTCCCCATATAAAACCCCGGTCTGGAA
GCCTTTTGTTTCTTTCCATTGTTTACTACTTGAACTTGCGTTGAGAAATT
AGTTTTTGTTGCTCACTTTTTGATCACGTGATTAAATCTTAAACAGATTC
CATACTTGGTAAAACGTGATCAAAAGCTGTGCAAAACGATTTTTATCTTT
TGATATTAACAAAGGAAAAATCTAACAAAAAGTTAAAACAATAGACTTCC
AGACCAGGGTTTTTTATACGTCGTAAGTTTGTACACCTGAAGTGTTTGAG
TACATCTCTAAAGAGGCTCGGTCTTCCTGGACCTGAGCAGTTGTCGGGGT
TTCGCGGGGTTTACATTTACGAATTGATTATGAATCTATTTTAACTCGCA
ATTTCTAGTGCGTGAGCCTATAAATATTTTGCTTGCAACTTGCGAGTCGA
GTGACTTACCTGGATCGCTTCGCAATTCTTATACATATACACTATCTTCC
CTTTCGGTAGACTCCATGGTAATCATATCCCGATAGAAAAGTAATGGGGA
CAAAATCATCCCACGTCTTTGTGCCGAATATAATAAATTTTATATCCCTA
ACTGGAATTTGATAGACATTATCATCCCGGTGTGAAAAAAGTTCCCATGT
GAAAAAGAGACAGGGGAATTCCATAGAAAGCATAGTGGTCTGAGTATTTA
AACTATAATGGTGATAAGACAATCTGCGAGTGATTTTCGGGCCTGGGGGC
ACTCGTTTCAAAAACGACCATACGCGCGGTCCAAAATTAGGCCTTTAAAA
TCGGAACCTTACAGTGCAGAGAAAGCTTAGGCGAAAAATCAGCCCTGACG
GTGCATTTTCTTGAAAATCTTTGAACATTCTCAGACAAAATATAGGGTCA
AATTTTCCAAATATTGCACCCTTAGTATGCAGTTTTCTCATTTTAGCTGA
TTTCGGCCCTTACAGTGCACTTTGGGAACCTTAGAAAATATACCCTATGG
CAGGACATTTACCTTGAGTGTCCCCTCTCCCGGTTTTTCGTGATCTATTT
AGCGGACAACCCCATCAGTGTTTCTATAAGGAGTATAAAAAGTGCTGGAA
GTTTCTTCAAATATATGGAAAATGTTTTTGTAAGTGCCAGGGCAAATCGC
AGCAGAAAATCTTCAAGTTTTTGATCTTGTGGTAATCTACTTAACAGATT
GTGAACAACTTTATATAGGTTCATGTTTTTCAACTTTTTCTGATTCATCA
ATTTGATGAATTTCGCTTTCTAATAATGAGGAATCTTGTTCAATCCATTT
AGTGAGAATATACTAAATGAATATAAAAGGAAGAAAATAGCATAACCCCC
GTCGCGGATATCCAGATTCATAAGGTTTGCTTGGATTTTCATAGCTCAGA
CAGGGGGTTATTTATAAAAGTTAATGTGAGTTAATAATTTATAAAGCCTT
TTTTGAGCTTGTGTACTTTTATTAATTTTCGCAGTTTTACTGAAAAATTG
AAAAAAATAGAGAATGAAATAAAATATTCTATCAAAACTGAGGTATTGCA
AATTTAAAAACCACAATTTTCTAAAAACAAAAACAGTTAAGAATATCTTT
CAATCACACTCTCCAATTTCCAATGAACTTCCCATATTTCGGATTTCGTG
ATTAATTTATTTTTTTGTGCGGTTTTCCTTTGCTTCTTTAAAAATATTTA
TTTTTAAATTATTGGTTCCAAAGCTCTCACTCTGATATTCTTCTATTTTG
AAGTCTAAAACTTTGAATGACTTTAAATCTTTTGAGAAAAATAATATTTA
TCGCTGTATGAATTTCCGATAAGATTCAAATATAAGAAATAATCCTAAAA
AGAGTAAAAACCTCTCACTAAGAAAATAAATCAACATTTGACATTATCCC
CATATCGCTCCAGTTAAGAGAGGGAGAAAGTATTAACTTTGTTTGTTATT
GATAAATTTGAAACAATGCACCTCCCCCCGAGGAAAAATTATTCAAAAGT
TCCGTTAGGAATGAATGGCCCATGTTGAGGATACGATGCGATATTTTTTC
TCTCGAAGGAGCCGAGTGATTAGTTTGGTTCCTTCCGTTACTTTCCCCGA
ACTTTGATGAAATTTCTCATCTTGAATATAACACTATAGCAATTGACAAA
AGTAAAGAATTCAATCCAACCGAAATTCAGCTTTCTTTGAGCTAAGTAGG
TCTCTTATCCTTTGAAATCATTTTCCCTTCCCTACCAATATTTTATTTTG
TAATAATCTTAAAATTATAAACATTCCGATTGTCCGCTAATCTCCGAGTT
TGGAGCTCCCCTACGGTCTATTCCCTTTGCGGGGCATCGTATATCCCGAT
TCGTATTTTTCTGAAACGTTTTATAACTTTATTGTCTAAATCTATTGTTT
TCACTCTTAAGGAGCGAAGTCGTCATGCACGTGAAACAGAAGTTATCAGG
AAAGAAAAAGAAGAAGAGACATTTGCGGACATGCGCAGATCCATCCAAAT
GATGACTCATACGTCAATCATCCTTGCGGGGGGCGTCAAAAGACATTGTC
CGAATGGTACTGAACAACAACAAAACAATACACCGAATAACGATAATAAC
AATAACGATAAAAAATCCAATCTAATTTATCCGCACAGTCCTAACAAACG
AAAAACATTCAAAGAAAGAATTCAAGACAAGTTAGCGTTCACATTTCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048551-exon-scaffold_143-1575043694:326792..326892 | TCONS_00048551-exon-scaffold_143-1575043694:326792..326892 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1575043694:321759..322919 | TCONS_00048551-exon-scaffold_143-1575043694:321759..322919 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1575043694:321000..321130 | TCONS_00048551-exon-scaffold_143-1575043694:321000..321130 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1575043694:318093..318381 | TCONS_00048551-exon-scaffold_143-1575043694:318093..318381 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1510915933:326792..326892 | TCONS_00048551-exon-scaffold_143-1510915933:326792..326892 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1510915933:321759..322919 | TCONS_00048551-exon-scaffold_143-1510915933:321759..322919 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1510915933:321000..321130 | TCONS_00048551-exon-scaffold_143-1510915933:321000..321130 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1510915933:318093..318381 | TCONS_00048551-exon-scaffold_143-1510915933:318093..318381 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1491911889:326792..326892 | TCONS_00048551-exon-scaffold_143-1491911889:326792..326892 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1491911889:321759..322919 | TCONS_00048551-exon-scaffold_143-1491911889:321759..322919 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1491911889:321000..321130 | TCONS_00048551-exon-scaffold_143-1491911889:321000..321130 | Clytia hemisphaerica | exon |
| TCONS_00048551-exon-scaffold_143-1491911889:318093..318381 | TCONS_00048551-exon-scaffold_143-1491911889:318093..318381 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_143 | supercontig | scaffold_143:318093..326892 - |
Blast
BLAST of TCONS_00048551 vs. Swiss-Prot (Human)
Match: KCNA2 (Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens GN=KCNA2 PE=1 SV=2) HSP 1 Score: 258.84 bits (660), Expect = 2.151e-78 Identity = 174/408 (42.65%), Postives = 260/408 (63.73%), Query Frame = 2
Query: 275 PSH-RVKFAAQAQNDNSNIITINVSGRRYQTYLTTLQRFPSSLLGDPMKRKNFYNQENKEYFFDRNRKAFSGVLHYYQTHGDEIECPTGVSEKTFAQELLFFELFDQKTN---DVDSIMSSTEFLVPKNVTLAKIWILFEKPNSSPSARILAVFSISIILLSITVFCLETVPAL---NPD-----------------HQEGKHMSSTWYLLNVVCNAWFTLEFVIRFVAAPNKLDFMKSAVNLIDLISILPFYI---SELIGHASDN-------SLAXXXXXXXXXXXXXFKLTRHSRGLHILANTIKASFQEXXXXXXXXXXXXXXXXXXXYFAESAGGHPDNKFRSIPHSFWWAVITMTTVGYGDLTPKTLIGQMVGTLCAISXXXXXXXXXXXXXXNFERYYKLE 1396
P H + + +A ++ + IN+SG R++T L TL +FP +LLGDP KR +++ EYFFDRNR +F +L+YYQ+ G + P V F++E+ F+EL ++ + + + E +P+N ++W+LFE P SS ARI+A+ S+ +IL+SI FCLET+P N D +Q+ + ++++ +C WF+ EF++RF A P+K F + +N+ID+++I+P++I +EL D SLA+LRVIR++RV RIFKL+RHS+GL IL T+KAS +EL +L+ FL I +ILF+SAVYFAE+ +++F SIP +FWWAV++MTTVGYGD+ P T+ G++VG+LCAI+GVL IALPVPVIV NF +Y E
Sbjct: 16 PGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQS-GGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEA--DERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRE 420
The following BLAST results are available for this feature:
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