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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048463 ID=TCONS_00048463|Name=TCONS_00048463|organism=Clytia hemisphaerica|type=transcript|length=908bp
NNAAGCATTAGTTAACCCTATGGACaatcaaaattacccccaaacagagc
aaatttaccccggacaaggcaaattttgtagatatttTTACTACGGACAT
TACCCTCGccatattttatttcaataccTTAGTCGGAGAAAAGTAACGTA
ACTTCTTATGGAAATAAGTTGCCTTTACAGTGGGGTGTGGGTGGTGCCCT
TATAAAAGACCTCTTTCTATTCAACCCCCTATTTGTTCGACCTTTTAACC
GCAAAGGCTTTCATTttgtgaaagaaaaattaaagcatCTGTCTTGCAAG
AGTTTTACCTTCTTTCAAATTAatgacaaatttttcaaaattctaaaaat
ttcaaataactcAATTAAATTACGGAGGTCTTAGTTAGAAACTAACAGAG
AATAGAACAAAAGCAGCTCTTAGCAATATTTCCTGACTGCTCGATCCGGC
TTTTCAATCGGTAATCgtatatttcaaattataatttcaatcccaatttt
ttatttgcaaaaatatgTCGTTTTACTAAGTTCTAAGTACAAAGCCTACC
CTGAATGATGTGGTGGATTTTAAATACCCTATTTAGTGTGATAATTTCAT
ATTCTTTACGAGGTCTGATTTTGGATACTTGATAATTTTAACTACTTTaa
aattaactttcgcgaagtcaacttttcaaaatattttgcaagCCAAAACA
AAAAGGTGTCACATTAATTTGctttaagaaaaagtttttaggaaAAGTAC
ATTTTTCGCGAGAATAAACTTTCGCAAGTTAGGTTTTCAGAATATTTCGC
GGAATTAACTTTTCACGAGATTCGCAAAACATTGCGAAAGTTTGATTCTG
CGAaagtttctttgaattttttttgaaaattgtatgaTTAAATACTAACt
gtacaaat Run BLAST on NCBI transcript from alignment at scaffold_142:276670..277577 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048463 ID=TCONS_00048463|Name=TCONS_00048463|organism=Clytia hemisphaerica|type=transcript|length=908bp|location=Sequence derived from alignment at scaffold_142:276670..277577 (Clytia hemisphaerica)
atttgtacaGTTAGTATTTAAtcatacaattttcaaaaaaaattcaaaga
aacttTCGCAGAATCAAACTTTCGCAATGTTTTGCGAATCTCGTGAAAAG
TTAATTCCGCGAAATATTCTGAAAACCTAACTTGCGAAAGTTTATTCTCG
CGAAAAATGTACTTttcctaaaaactttttcttaaagCAAATTAATGTGA
CACCTTTTTGTTTTGGcttgcaaaatattttgaaaagttgacttcgcgaa
agttaattttAAAGTAGTTAAAATTATCAAGTATCCAAAATCAGACCTCG
TAAAGAATATGAAATTATCACACTAAATAGGGTATTTAAAATCCACCACA
TCATTCAGGGTAGGCTTTGTACTTAGAACTTAGTAAAACGAcatattttt
gcaaataaaaaattgggattgaaattataatttgaaatatacGATTACCG
ATTGAAAAGCCGGATCGAGCAGTCAGGAAATATTGCTAAGAGCTGCTTTT
GTTCTATTCTCTGTTAGTTTCTAACTAAGACCTCCGTAATTTAATTgagt
tatttgaaatttttagaattttgaaaaatttgtcatTAATTTGAAAGAAG
GTAAAACTCTTGCAAGACAGatgctttaatttttctttcacaaAATGAAA
GCCTTTGCGGTTAAAAGGTCGAACAAATAGGGGGTTGAATAGAAAGAGGT
CTTTTATAAGGGCACCACCCACACCCCACTGTAAAGGCAACTTATTTCCA
TAAGAAGTTACGTTACTTTTCTCCGACTAAggtattgaaataaaatatgg
CGAGGGTAATGTCCGTAGTAAaaatatctacaaaatttgccttgtccggg
gtaaatttgctctgtttgggggtaattttgattGTCCATAGGGTTAACTA
ATGCTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048463-exon-scaffold_142-1491911889:276670..277577 | TCONS_00048463-exon-scaffold_142-1491911889:276670..277577 | Clytia hemisphaerica | exon |
| TCONS_00048463-exon-scaffold_142-1510915933:276670..277577 | TCONS_00048463-exon-scaffold_142-1510915933:276670..277577 | Clytia hemisphaerica | exon |
| TCONS_00048463-exon-scaffold_142-1575043694:276670..277577 | TCONS_00048463-exon-scaffold_142-1575043694:276670..277577 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_142 | supercontig | scaffold_142:276670..277577 . |
Blast
The following BLAST results are available for this feature:
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