TCONS_00048410 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048410
Unique NameTCONS_00048410
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2025

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048410 ID=TCONS_00048410|Name=TCONS_00048410|organism=Clytia hemisphaerica|type=transcript|length=2025bp
gtttttcgacGTGTACTAAAGACCTTGGagatgtttgtttacattcttaA
TGGGTAGCTGGGTGACATTAAGGGTATCTTTTTATTAGTGTGAAGATATT
AAGTACATCGCTGTAGCTACAGGTCATACCGGAAAAGTGGAAAAACATTT
CGGACAATTTTCAAAAGTTCTTGCCATTTGTTTTGTTGATGGTCAGAAGA
GATTAATTTTTCTACTTTCCACTACACCGTAAATTTCTCCTGTTAATTTG
TTTAAGTGTTTAACTGAGGATGATGGTGGAAAAACAAGATGCTGTTCACA
AATGGGTACAACAAACTTCACTCGAAGAAAACAACACAAACGTCGCCATG
TTGGATCGAAATGAACGGGACCGAAAACCTCGATCGAACGGTCGTTACTT
CAATAAGCAACGTGCACAACAATACTCTCCAACCTCCACCGACACTGGAT
TGTCCGGATCTCCACCGTATGTAAACGGAATTAACGGAAGCCGGACTAAT
CTTACAAATGGCTACAAACCATCCTACTCGCCGACATCTACTGATGCTGA
ATCAGTCTCACCCTTACCTTCAAATGGGTGGGATTTTTCAGAGCTCGAAA
TGCGCTACACATCAATGATAAATAGCCTAAAAGACGAACTTTCTTTTCTT
GAAGAATCAAACACCAATCTACTTACGGAGCTACGAGAAAGTCAAAACTC
GAATTACGTATTAACGGAAGAAATTCGACGTCAGCAACGTAACAACTTAA
GTACGTTAGATGAGTTACAAGCGTGCCAAACAGCAAATTCAGTTCTGAGA
CAGGAGTTGCAACGTCTTGAGCAATCCAGCGTTAAAATGTCCAGAGATTC
TGAAAAATACAAGAAGGCGAACTCGATGCTTAAAGATGAGATCAAAGACC
TCAAAGCTCATAACTATAAACGTAAAAACAGTATGGTTACACTCAAAGAG
AAAGCTATTGATCTACAAAATGACATTCTAGAAAAAGAGAAGGATTTCAA
AGATTTGTCATCTCTCAAACAAACTGTCAATATAATAGTCGAAGCGGTCG
AAAACGATTCTAACATCGATAACGGCTATTTCCCAACCGATTCGGACATT
TCTAGTAACGATGGCAACGATGATAAACAATTGGGTGCTTTCACTCCAAA
ACCGGTGAAAGTATTGGAACGATCAACTCTGCTTCTCCCGAGCAAGGAAC
CTTTGAGCTCTAACATTTCATCTTCCGCGTACGTCTGAAGAAACGATTTA
AGTGGATGCCTAACTCGGATACTACTTTGAATTAATACACCCAGGACGTG
TATCTTCGAGCTCTAACATCTCTTCCATTGAGAATGTACAACCATAACAA
GCCAAGATGTTGTTTGGACGTTATATTAGCGTTCTTTTAACGAATAATGC
TCAGGCGAGAAATAATCTAACATTTCAAATGTTCTAACATTAATTTGTAG
AAGGACTTCAAAGAGACTGACATATGAACAATAAATGAACATGTTACATC
TTGGCTCCCGAAACAACGGATTTAATACACAACGTCCCGCAATATCAATC
TAACGTCGTACAGATCTTTTTCGATGGATATTGTTAATGTAGGATCACTA
GGAAGGCACTCATTAACTCAAAAATTATTTGTACGCTTGTATGCGTAGCA
TCAATGAAGTCTTTAGTTAGAAGACATTTTTATCTGTACGAAAATATATC
TCTAAAGCGTTCACCATACTTGGAAATGTATCTGGAAATTATCACAACTA
CTGCTGTAAAAATACTACTACGAACCGTAAAAATGATCAAGAAGTGAAGT
CTGATAGACTTTTCAATGGCAAAACAGACcaataaaattttacaactttt
tactACAGTTTTGCGTGtttttgtctttaaaaataatatctaaatatctt
ttaaaaacctTCTATAAGAATACCCACGTATTTTTACTTGGCAATATACT
AAGAACATATTTGACTtaagaattttgtaaaatattgttattttctACAA
AACTTTGAAACATACTAGAAAATGA
Run BLAST on NCBI

transcript from alignment at scaffold_142:870718..884887-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048410 ID=TCONS_00048410|Name=TCONS_00048410|organism=Clytia hemisphaerica|type=transcript|length=14170bp|location=Sequence derived from alignment at scaffold_142:870718..884887- (Clytia hemisphaerica)
GTTTTTCGACGTGTACTAAAGACCTTGGAGATGTTTGTTTACATTCTTAA
TGGGTAGCTGGGTGACATTAAGGGTATCTTTTTATTAGTGTGAAGATATT
AAGTACATCGCTGTAGCTACAGGTCATACCGGAAAAGTGGAAAAACATTT
CGGACAATTTTCAAAAGTTCTTGCCATTTGTTTTGTTGATGGTCAGAAGA
GATTAATTTTTCTACTTTCCACTACACCGTAAATTTCTCCTGTTAATTTG
TTTAAGTGTTTAACTGAGGATGATGGTGGAAAAACAAGATGCTGTTCACA
AATGGGTAAAAAACTTTCATTATTTTATTGAAGATTCTTTGATAGAATCA
ACTTTTGTATTACGCCTTATTATAAAAGAAAACCAATTTTTTTGAAATCA
CTTCAGAAATTTAGAAAAAAAGATCCCCTTTACCCAACTGCAATGTCCAA
TCCAGTGTGTACGGCCATCCCACCGTTCATTGAACATTAGCGAGTTTATG
TATATGCGCTTTTGAAGACGTTAAAGTGACTGAAGCGATTTGGAATAACC
CGCAGTGCTGCCCTGCAAAATCGAGGATGGTAAAGTTGCTGATTTACCGT
CGATTTTACCGTTCATTTTACGTCCTCGGTTGGTCAGGATGTAGACAAAT
TAAAACCTTACCGTATCCGTCGTAGAAAAACACACATACATAAACTCGGT
ATTACAAATGGGGGAACGGGAAAAATAGCTGGGAATTCGTTTTTTTCTTA
TGATTTTTTTCTATGATTGTGAAAGCCTCTAAATTTTGAGTTCGTGCTTT
TGAAGGTAAAAATATCATTAAGAGTAATTTCACGCATGAAAAACTAATTT
GATTCAAACTCGAACTCAGTCCATTTAGTCCGCTCTTGAAAACCACTACA
ATAGACGATATTGCGTTTAGATAAATGCAATGCATTCTTGTTTCTCGGGG
ACCCTTAAGGGAATTATAATCTATTCCAGATCATTATATAATCGACATTA
TAATTCCTTTGAGAGTCCCCGAGAAACCAGAATGCATTGCATTTATCTAA
ACGCGATATCGTCTATTGTACTAACGTCCATCGGTAATAAAAAAAACGTG
GTGCAAGTGGGTTCGGGTAAGTACGCGATTGAATTTAAATGGTAATCGAA
CTTACCGAAAATGTTTTTTTCCGTCATCGGTAGCGTCAAGCAGTTTTTTA
AGCACGCACAGAGGAAGTACTGAACGCTTTTGCAACGAATTTTCAATTCG
ATTGTTGACGTCAGCTAAAAGCCGCGGTGACTTTGATAAAATGTTTCTTA
TCTAATCACTTAAAGTCAACTGCTCCAATTACGAAAACATATTGGAAAAT
TCTTGAATGCCAAGTTTGACGCAGTAGATCAATTCATTTCGTTTGCTTTT
GACGTTCAAAATATTTGATACATTTATAAATACTGACTTGAATGACTCTT
ATAGTGCTTATGTTGAATCATGGTTTAGTTGTAACAGTTAGTTAGAAGAA
TCTGGATCGAAATGCTTTTTACATCTGCCTGAAGGCTTTATAATTAATTG
ATCGTAGACTTTGGCAGACCATGAGTGTTTTCTGACCAACACGCTGAAGC
TCTTAAAGAGATAGATGAAAACAAACAATCTGACGAATTAGCTATCAAAC
TCATATTTCGTAAAGACCGCATATTGAAATTGGACAAAAAAGTCGTTGCG
AGATTTTGTTAAAATAGGGCCCTTAAATGGTTAATCTTAAGCTACTTACT
ACTGCACGGTTTACCGTATGCGTAAGAAAGTTATGGTTGTCTGTTACAAG
AGGTCACATGTTCCACAAATGTACTGAGCAATAGTGTAGATGAAATCTTA
AAATGGAATCCTTAACCTCAAAGTTTAGTGTAGTAGGTCGTCAAGTTTTG
TTGGTCGGGATTGCCAGCTAAACTTCCAATGACATAACATGTATTTTTAA
ACTATGTTATACAATGTGGAAATCTAAACTTGATTCTGTTTTACCCAGAA
GGAAGAGAAGTTAGATAATAAAGCAGTCTCCACGTTTTTATTTTCTCCTT
TTCGCGGAACTCTATAAGTCACTATTATAACTTGTTATGAAGAATATTAC
TTTCCTTGGAGACGGTAGGAAGAAGGCGGTCTAATGGTTGACCCTCGATA
TTGCGTTTTTTATGACCTTTAATTTTCGATTTCAATCACTGATCAGAAAA
TAAATTTATAATCATCGTTGAATTTTGTGTTGCTGACAACGCTCGTTGTA
GAAGGGGTATATACCGAGTTTATGTACGTGTGTTTTTCTGTGACGGGAAC
AGTAACGTTCTTATTTGTCTAACTCCTGGACTAACCGAGGACGACGGTAA
ATCAGCACTTTTACTCCTCGATCTTGCGGGTCAAAACTGCGGGTTATTCA
AAATCACTTCAGTCACTTTACTGTCCTCAAAAGTCCAATTTCATTTTAAA
CGTTCCTTGGTATTGTGGTGTTTGAAGAAAGATGTGATGGTACTTCAAAC
ATTCCCCCATAGGCGTAGCGAGATGCCCTGCAAAATTTATGGATGAGAGT
GGTTTTTACGACACTGTAATTATTGTCTTTGTTTTATCAAAAGATAGTCA
ATATGTCAAAAACGTCTACACTCCCTCATAAATTTTGCAGGGTATCTAGC
TACGCCTACGCATGTGGTGACAAAATATGGAGTTTAGTAATTTGTGTGTG
TGTCGATATTTCGGTGTTTTTGGTCCCCGTACGCCCCTACCATTGTATAT
CGACATTGAGCCTCAAAAATACCAAAATATAAGAATAATTTAAGAGTCTT
GAATTGCCTTTCTTAAAGCCTTTTAGGAATCAGAGAAATAAAAATCCTCA
ATTTTGAAATATTAGAATAATATAAGAAAAAATCAAGGCTCAAAATGCTT
AAAAAATTTACTTTGCTACTAAAGTCTGTTCACGATAAGTGTGCGCTCTT
TTTTCTTTTACCTATAACTTTTAAAGGAATTCTTCAAGAGTCTAGGTAAT
GTTCTAGTTGGTGAGTTGGGGAGTTGGGGAGTTGCTAGTTTCGAGTTGGG
AGTTCGTAAAACTTTACGGCGACCGAAAATTTTCTAATTTAAACTAATGT
AGCCCAAAAGTACAAATTTCAAATTAGCCAGTACCAAACATATTATTGAC
TTTAAGATCATGAAAATGCCAAAGCCAAGCAAAGCCAAAATACTTAGTAC
TGTTATGTCATTGTCATAATGCTGATAACATGACACGTTCTTGTGAAAAT
ATTGACAAAATCTTTAAATATAATGATTGTCAAACAAATTCCCCAAAAAA
TATTGATCATACTGCTAGTGATGCTTATTGTATAAAAGGATATAAGTTGA
CAGTCATCTTAGCCTCAAAAAATTCGTAGAGATAGCTTATAGAGCTAGAA
AAATAATGACACTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAAATACAATGGTTCTAAAGTCACTTTAATCAAGAATTATATTTATACTC
AATGTGATGCAGGAAATATAAATGGATATGAATTGACAGTAGAAAATAGC
TGTCCATGTTCTCAGCGCACGTGTTTAAGGCAAATAAGCCTATTACAGGT
GGTATATGTATTATACGTATTATATGTGTTATATATTACTCTCATATTAT
ATTTACTTTCAAAATCGTACTTTTGATGTATGTTATTCTTTTTCGGTAGC
CGGTAATTTTTTAACTCCCCAACTCGAAACTAGCAACTCCCCAACTCCCC
AACTCGAAACTAGCAACTCCCTAACTCGCGACTAGAATAGTTTCCAAACT
CATTCTTCAATCTTTATAAATTTGGTATCGTTGAAGAGATAGTTGTTGGC
GGAACAATTTGAAATAAAAAAGTCTTTAAAAAAATTCTAAAAATATAGAT
GAAAATAAAGAAGAAAAAAAGGAAGATCTTGAAGAAAAGTGCTATAACTT
TCATTTTCACTGGAGAGATTCTTTGATCTTAGGAGGTCATCACTGTGAAG
AAATTTCACTAAAATATTTATTCAATATAAAGTTAAGATACAAAGTTAAT
AAGTGATTGACCCCAAAAAACAGCAAAAAACAGCAGAAAGCAGCGTTTTT
AGACGTCAATGGAGCTTATAACTTGTTTGATATCTTTTGATTGAATGATT
ATTTTTGAGAAATTTTTGCACAGGGATGAACGTTGGTTGATTAAGGATTC
AATTCAGTGAAAATAAAAGTTATAGCACTTTTTTACAAGATCTTCATTTT
TTTCTTCTTCATTTTCATCTACATTTTTAGAACTCTTTTAAATATTATTT
TATTTCAAATTGTTCCACTCACTAATATCTTTCCAATGATACCAAATTTA
TAAAGATTGAAGAATTCCTTCATAAGTTATAGGTAAAAGAAAAAAGAGTG
CACACTTATCGTGAATAGACTTTAGTGAGATGCATCTTNTAAGTTATAGG
TAAAAGAAAAAAGAGTGCACACTTATCGCGAATAGACTTTAGTGGCTGTA
ACTTTCGATGCAATTGATGCAATGATTCATAGATAGAAATTAAAATTACT
GTTTTATGTAGGCCTTGGACATCCTTACCTCAAGTTAGAAAAAAAAAACT
CTACAGCTTTCTTCATCTTCAAGAGGTAAGGTTGAGCCGTAACTCTTCTA
TAAAAGGAACAAAAATTGATCAGTAGTAATTAAAAAGCAATCAAAAATAA
ACAATGGAAAAAACGTTAATTAGTGTCAATTAAGAAACAAATTCTTTTTA
TCCTCTATTTCATCTTGTATGTTGTTATGAGAGTTGCAATTTAGTGAAAG
ATTTTCGTGGTCAGATTTGTGTTAAAAGATTTCGTTGCAAGGCTTGGTAG
CTGAAAAGTTGCTTGAAAGATTTTTTTGGGGGAGCGAATCGGTAATGTCA
GGAGTCAAAATGCAAAATGGCAGCGTACCTGTCAAAGGCAGAAAAATTGA
TTCCAAATTAAAACTGAAAGTAGGTTTAAAATTTTCATGTTATAAAAATT
ATTCCTTCTAGCGATATATAGAGGACTTTTACAGGGCAGGGTTGGCCACT
TAGACAAAATTGGGTACAAGGAGGTGCCACTGGTCGTGGTCCCATTTTTT
AGGCTCTGAAGATATCTGACAGGGTCTTAAATTTACGGATCAGGTCCGGT
TGAACTGGTCGCTGGTTGGATTCTTTTCAGGATGGAAATTAGAAAATTTT
GCGTTCACTTTTAGTCATTTGAGCCACTTTCTAGGGTGAAAATGGGAAAT
TTTTTCGATTTTTCTTTCTGACAGGGTCCCAAATTTTCCAGATATTCATA
TCTGACAGGGTCCATTTTTCAAACTTTAGCGACACGTCCCCGTCGGCCGT
CAAAGTCAGTGCCCCCCGGGTTTTCATATTTCTGTGTACCGGAATGCCAC
TATGTACACGTTTGTTTTACAAAACGTGTACGTGTTTTTCTCAGTGACTC
GGTGACGAAAATGGCCCTTCACGATTGGATAAAATTATAAGAAGAATATA
ACAACATACAACGGATAGGGGGAGTGCTTTAAAATCCGTTAGTTTTTAAT
GAGTGGGGAATTCTAGTCCACAATCCAGAAAACTCGTTTGGGATAACAAA
ATTTCTCAGTATGTTTCCCCTAAGAGTAAGAGAGCTCAGCTTAATCTCTC
AATGTAGATGTAATTTTGTGGGAAGTTATTTCTTAAAAGGGAATTTTCTA
TATAGCCATAAACAATTGTTTCCATCTAGGCTAAGGGGTCAATATGTTAT
ATTGATGAAGAAAAATCAGAGCCTTCTCATAAAGATATAGTATCAAAGAC
GATAGTTAATCGCGTGGGAACACTAAATACGTGACATCGAATGGTTCAAA
TATATCGGAAAGGATATTGAGTATTTACGAAATCAAAAAGAGATCTAAGA
AGGAGTGGTCTGGGTCGTAATGATCTCCTATTTCTGGGTTTGAAGCACTC
TTCCACAGTGTCGTTTGCTTTCATTTCGGCATTTGTTTTCCTGAAAACGG
GATTTGCGTCAACAAGTTTCATAATTGCTACATTTTTTGTACCAGGAAGA
AAATTTCGTTTTATGAAGAAACATTTTGAAAAAATTAATGATTTCTTTTT
TTTTGCATCCGAGGGGTTTTAAAATTGAGAAATCCGTTACTTTGAAATTC
AAAGGAGAGAAACATAATATTTCATAAGGAAATTCAGTATATTTTTCTAA
TTAGGATAAAATTGCAGAACGATATTTTTCTCTGCAGATGAACCTTTGAC
TAACCTTTCCAGAAAGAAGTGATGCTTGAACCCGGTCTGCAGCACATGCA
CGTGAATATTGCAAGGTGATTATCCGACGGAGAGATGGAAGTTTAGTTCT
CAGTAAAAGTAGAATTGATCAAAACTGAAACATCAGCTTTTTTTCAGCTA
TTTTTCTGTCTTCACTGAATTTTCTGATTTGAAAACAATGGAATTCAAAT
CCCAGCAAGCCTATGCAATATCTATCTCCGTCAAACACCCCTGTCTCACA
GCCCCGGTGAAACTTTTTTCCTCATGGGGATAAAAACTCCTATTGAAATC
CCAATGGGGATAGAAATTCTATTGGGTTCTAAGGTTAAAAAAATTCAGTG
GGGATGTGTTTTGAGTGCAATTTTTAAACATTGAATTTCGAATGGGGGTG
AAATCAAAGTCAATTTCCCAGTGGAGCTGAAATTTCAGGGTATTTTCCCA
CCAAAGATTTTCCTGTTGGGCTGGGGTCTTAGTGGGTCTGACACAGGGGT
GACATCGAGCTTCAGTCCGTAATTTTTACCCCCATTGGTTGAAAATCCTA
CTGGGTCTTTGAGGAGGGGGTGTCTGTGTAGGTTGGCTAAATCTCTTAAG
ATAAAAAGGAAATGTCAAGAAATACCAAAGAAGCTTATCTCTAATCTGTT
CCGTATAAATGCCAGAAGTTAAACCGTGACATTTGAATTCAAAAAGAACT
ATGTAGATAAAATGGAGAAGAAATCCTTGAAAAGGAATTAGAATTTGATT
TCTTGTACGTCAAATTCAGATTAAAAGAGACGTAAATGTTTTCATTATTT
TTCGTAGGGTATGCTGGTTTTTTATTGTTGACTTAAGTACTGGAATCTCA
CTGGACTTTTTTAATTGCTTTTTAATTCTGATGTTATGACGTTGGGAAGC
ATTCTTCCATCGTTGGTTATGGGCTCTTCTAGCAAAAATACCTAGGAGGT
TAAAGATGTACACTTTATTTTTTTATAAGAACAATGAGGCTCAAAAATGC
GAAAAAATAAGAACAATTTAAGAACAGTGGAGAGGCTGAAGTTAGAGAGT
TATAGCAAAAAGAATAACTGGTTTCTAAAATCCTCTAAATAGTAAAGTAA
ATAGCCAAAACTTGTTTTTTACCTTAGAAAAAATAAGAACAAAATAAGAA
CAATTCAAGGCTCAAAATGCCAAAAAAATAAGAAAAGCCGAGCGTCAGCA
AAAATTTACTGGCAAAAAAAGAGGTGTATTTTCAGCGTATTGCGATGGAA
AATTGTGAAAAACTGTAGATTAAATTTGCATTGTCCAGGGGTAAATTTTA
AATGCCCACTCACTGAAAAAATAAAATATTGAGCGGGTTTAACTTTAGTT
CAGTAGAGCCAGGTCTGTAATCAGCTTTCCTGAAATTTAACTCCTTTTGT
TTTAGTGCTTTTACGATTTTGAAGGCGAAGTTATTTTAAAGCTTGCTCGA
GTTAGGGAAACATTCGAGTTATAGAGGTCTGAGTTAAAGAGTCTCTACCG
TAGTTGAAATTGATGAAAAGTCACGTGATCCTAGTATGTAAAGAAATGTT
GAAACATATTTGAAAAGTCTTTTTCGATGCCATGTTTCGGAAATCAAAAT
AATACCTGGCTAATTAAGCACTAATTAAAAATTTATTGTTCAGCCTACAA
TTTCAAAAAGTTCGAAGGAAATTGGTATAGCTCACTATGATAAAAAAGAA
TTCCAAAATTTTATTTTTTGTTTTTCTTTTAATTTGTTTGTTGTTGTTTT
CGATGGTCATTAAATGCTTCGAGCAATAAATAAACAGTTCAGTAGTAAAG
TTTTGTACTTTGTTGAGAGAAGATCTTGAAGGATTTTAAATCAACTTTTT
CTTCTGACCTAAATTTCACTTGAATACCACAAAGATTGTATATCAATGTT
ACTACAAACGGTCGAGGTAAACATTATCAATTGCTTTTGAAAATTTGATT
TTGACTTAAATTTCTAGGACCATACTTGACTAACTTTCATGGGTCTCTCC
AGTACGTTTTCAATGACTTTTTAAACCTTTTGATTTTGACAACTGTAGTC
TTTTTAGGCCACACCCACTCATCAATGCAAGAATCTCTTATTCTCGGCAA
ACTTTGAAAGTCTTTGTGAGGTTTTCAGGATAAACAAGTCCGAAACATAC
CATTTAACCATTTAAAATTGCTTTATAAGAGGAACTGTGAATCGCACAGT
TAGTCTTGACCACAATAAAGACTATGAAGTTTCCTTTTATCGCCAAATGG
AACAAATATAAAAGATAGTTATAGCATTCTCCTTGTATCAAACTAAATTT
TGACTCTGGTCAAAGGGGTTGTATTTTTTGATTGAGCAAAGTAGATAGCG
TTGAGGACATTTTTCAAAAAAAAATATTTTGGAAGTTCTAATTCTATCGG
ATTTGAAGTGTAAGTATACTCTTGTCTCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAGAACTTTTTTTAACAACAACAAAAAAGAAACTTTAGCAAAT
GAACACGTAAAATAAGAACCAATACTAACAAAAAAGGAAAATTTTAATAC
GTTTAAGGTCTATCTACACTTTAATAAAATATTGAACTATTCGAATTTAA
TTGGCGGGGGGGACGTCTATTCGGGAGACAAGAGTAGGTAAGGTAATGCT
ATTAGCCACATTTTATCATGTGATTCAATTTTGATGATTTAACTTTTGAC
AACAATAGTTTTGTCATCAGCAGTTCATAGGGTTACTGTGAAAGAAGATT
GTAGATTTCTTTTTTGAAATTGCGGGGATTGTTGGCTATGTAGACGACAT
ATCTCACCGCACATTGTTAATTTTATCCTGTAACATCGACAAAGATTTTT
CATAATTTATCACTGTCAGAATTGTGTAAATTATTCAAAATAATTGTTAC
GAATAAATTCTCTAATCACCGAAAAACATCAGATGTTGACAACTTTCAAA
CTAGTCAACAATCATTCCTCTAAATACGGAAACATGCAATCACGTCATAC
AGTAGGAAAAAAACTTTCATAATTAAGGAGGTTATTTAGTGGCTTTTTCA
GGAAGAAATACCGAAATTAAGCAGATAGTCATTAAAAATATACTCATTAT
ATGCAAAATGTTTTACTGTATTTAGAGCATGGTGCCACATTGGCTTTTGA
TTATTTTGTTCTAGAGAGGGGAGTGACTGTTGGATATGAACGGTGTTCTG
CGTAATGTGATATGATGATATCTATGTTGTCGAACGATTTGAGGGTTTTA
TTAAGTCGAGGAATGAATACATAATCAAAATATTGAATTGATGAAGTGAT
TGAATGAATTTAGCCATGAAAATTTTTAATGATTGTGGTTAGAGTCTGAT
GCCACACTACGTTGTTTGAGGGTCCATCTAATGTCTACAACACCCATCTT
ACATCTTTGACGTTGATTGGACGTTAAATGAACGTTGAAACAACGCCGTG
TGTCAGTTGGGAGTTTGTATAAGGCATCTTTGTTGAGTCAACATCAGTAT
TAGGCATTAAAATTTGAATAAGGTATTTTCTGTTGGAAAAAGTTTTGCTA
AAAGTTAACTACTAACCTTTGAAAACTTCAAACTATTTTGACAAAAACTC
GCCAAAATAAAAACTTTTGAAACTATGCAAAGTTTTTGGGTCACCTATTA
GAATATCTCATCTTTGTTTCCCAGGTACAACAAACTTCACTCGAAGAAAA
CAACACAAACGTCGCCATGTTGGATCGAAATGAACGGGACCGAAAACCTC
GATCGAACGGTCGTTACTTCAATAAGCAACGTGCACAACAATACTCTCCA
ACCTCCACCGACACTGGATTGTCCGGATCTCCACCGTATGTAAACGGAAT
TAACGGAAGCCGGACTAATCTTACAAATGGCTACAAACCATCCTACTCGC
CGACATCTACTGATGCTGAATCAGTCTCACCCTTACCTTCAAATGGGTGG
GATTTTTCAGAGCTCGAAATGCGCTACACATCAATGATAAATAGCCTAAA
AGACGAACTTTCTTTTCTTGAAGAATCAAACACCAATCTACTTACGGAGC
TACGAGAAAGTCAAAACTCGAATTACGTATTAACGGAAGAAATTCGACGT
CAGCAACGTAACAACTTAAGTACGTTAGATGAGTTACAAGCGTGCCAAAC
AGCAAATTCAGTTCTGAGACAGGAGTTGCAACGTCTTGAGCAATCCAGCG
TTAAAATGTCCAGAGATTCTGAAAAATACAAGAAGGCGAACTCGATGCTT
AAAGATGAGATCAAAGACCTCAAAGCTCATAACTATAAACGTAAAAACAG
TATGGTTACACTCAAAGAGAAAGCTATTGATCTACAAAATGACATTCTAG
AAAAAGAGAAGGATTTCAAAGATTTGTCATCTCTCAAACAAACTGTCAAT
ATAATAGTCGAAGCGGTCGAAAACGATTCTAACATCGATAACGGCTATTT
CCCAACCGATTCGGACATTTCTAGTAACGATGGCAACGATGATAAACAAT
TGGGTGCTTTCACTCCAAAACCGGTAAAAAAATCGGATACTTTCTCAAGT
TCTTTGCCTTCACCTCTAGCAAGGAAATTCTTTGCACATCAAAACGGGGG
TAAATCTCCATTACTGAGACGAAAACAGAAAGACAAATACAACACTGACC
TGACTGAACGATCTCGCTCGAGATCCTTGAACGTGACTTCTGGGGAAAGC
CGGGACGAAAGTCCCTCTCCTCCCCATTACAACGGTCCCTCATCCGGCCC
TTTACCGGCGGCTGGGGACCGACGACGAGGGTCTCTTGATAGTTTTCATC
AGAATAAGGACTTGAAAGAGACCTCTCTTCGTAACAATACTTTGACACGA
CAGTTAGGGAAATCCCTTGAACGACTTCACGATCATAAAATCAAACGATC
GGAGTCGGGGAATCGCCCACGTAGTATGACGTTTGACGATCGACATAACG
ATAAAATGACGGATGACTTTTCTTACGTCGTAAAAGGTAATGTTTAATGA
CTATGACATGACGGAACTGACGAATCGTTTTTATAGAAAATCTACGTTTA
TTTGTTTCAACAAGCTTATAGTGACTACCGCATGTTTTTCAGACGTGTAG
GGCTGCAATACACATATTTCCTATTAGCAGATTCATGCAAAAGTCACGAA
AGACGTCGAGTAAACAAACTTTTGATTGGCGGAGGGATGCAAAGATTACC
TCTTACATGGACAATTTGAAAAAATATGCTTGTATGTGCAATATTTCAGC
CAATCAGAGACTTTCTCGACGTTTTTCGTGACTTTTTTACACGAATCCGC
TAATAGGAAATAGGTGTATTCCCTTTATCAACCTTCGTATAAAGAAATCG
ATTTAAGCTCCCCTGCTAGGCATTTTCGTACCCAGAGTCTCTTACACCAC
TTTTTGATTGTGCTGATGGATGTGATACAATCGTGAACGCTATTAGATTC
ATCGAAAAAGCGAAATAAGGGACTGGGTTCGAGTCTACCTATTTTCTAAA
TGCAAAACTTTTCATGATCTTATAACTGAATGTTCTTCAATTTTTAATGC
TCTTGTGTTCTTATAAGTAAATGTTCCTTCTTTGACTTTTAACGTTATAT
ATAACTAACTACAGTTGACTTTCTCTAATTCGATCTCAAAGCACAAAATA
TTATCTTCGAATTAGAGAACGATTCGAATTACAGAGAGTAATTTATTTCA
TTCTCAAGCCGGGGGACCAATGTTTTAGTTTTAGTTTCGAAAAAACTTAA
ATAATAGGAGTTCGAACTAGAGAGAATTGACTGAAGAAAAATGGTCTACC
TTTTCGATGTTTTATCTAAAAATATGTTCTGTATTTGATGTTCTTTTAGG
TGAAAGTATTGGAACGATCAACTCTGCTTCTCCCGAGCAAGGAACCTTTG
AGCTCTAACATTTCATCTTCCGCGTACGTCTGAAGAAACGATTTAAGTGG
ATGCCTAACTCGGATACTACTTTGAATTAATACACCCAGGACGTGTATCT
TCGAGCTCTAACATCTCTTCCATTGAGAATGTACAACCATAACAAGCCAA
GATGTTGTTTGGACGTTATATTAGCGTTCTTTTAACGAATAATGCTCAGG
CGAGAAATAATCTAACATTTCAAATGTTCTAACATTAATTTGTAGAAGGA
CTTCAAAGAGACTGACATATGAACAATAAATGAACATGTTACATCTTGGC
TCCCGAAACAACGGATTTAATACACAACGTCCCGCAATATCAATCTAACG
TCGTACAGATCTTTTTCGATGGATATTGTTAATGTAGGATCACTAGGAAG
GCACTCATTAACTCAAAAATTATTTGTACGCTTGTATGCGTAGCATCAAT
GAAGTCTTTAGTTAGAAGACATTTTTATCTGTACGAAAATATATCTCTAA
AGCGTTCACCATACTTGGAAATGTATCTGGAAATTATCACAACTACTGCT
GTAAAAATACTACTACGAACCGTAAAAATGATCAAGAAGTGAAGTCTGAT
AGACTTTTCAATGGCAAAACAGACCAATAAAATTTTACAACTTTTTACTA
CAGTTTTGCGTGTTTTTGTCTTTAAAAATAATATCTAAATATCTTTTAAA
AACCTTCTATAAGAATACCCACGTATTTTTACTTGGCAATATACTAAGAA
CATATTTGACTTAAGAATTTTGTAAAATATTGTTATTTTCTACAAAACTT
TGAAACATACTAGAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030795XLOC_030795Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048410-exon-scaffold_142-1575043694:884583..884887TCONS_00048410-exon-scaffold_142-1575043694:884583..884887Clytia hemisphaericaexon
TCONS_00048410-exon-scaffold_142-1575043694:872915..873763TCONS_00048410-exon-scaffold_142-1575043694:872915..873763Clytia hemisphaericaexon
TCONS_00048410-exon-scaffold_142-1575043694:870718..871588TCONS_00048410-exon-scaffold_142-1575043694:870718..871588Clytia hemisphaericaexon
TCONS_00048410-exon-scaffold_142-1510915933:884583..884887TCONS_00048410-exon-scaffold_142-1510915933:884583..884887Clytia hemisphaericaexon
TCONS_00048410-exon-scaffold_142-1510915933:872915..873763TCONS_00048410-exon-scaffold_142-1510915933:872915..873763Clytia hemisphaericaexon
TCONS_00048410-exon-scaffold_142-1510915933:870718..871588TCONS_00048410-exon-scaffold_142-1510915933:870718..871588Clytia hemisphaericaexon
TCONS_00048410-exon-scaffold_142-1491911889:884583..884887TCONS_00048410-exon-scaffold_142-1491911889:884583..884887Clytia hemisphaericaexon
TCONS_00048410-exon-scaffold_142-1491911889:872915..873763TCONS_00048410-exon-scaffold_142-1491911889:872915..873763Clytia hemisphaericaexon
TCONS_00048410-exon-scaffold_142-1491911889:870718..871588TCONS_00048410-exon-scaffold_142-1491911889:870718..871588Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:870718..884887 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.438347	0.221127	0	0.133751	0	0	9.06916e-06	0	0	0	1.72135	0.782307	0	0.135794	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048410 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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