TCONS_00048401 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048401
Unique NameTCONS_00048401
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1911

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048401 ID=TCONS_00048401|Name=TCONS_00048401|organism=Clytia hemisphaerica|type=transcript|length=1911bp
gaaatttttgaaacctttcctCTTGCACTCAGGATAGcgaataaaaatag
aaaatcaagGAGACAATGGCATCATTTGAGAAAGCATACttggttttatt
tttgttatccTTGGTCATCTCGTCAGTTCATTTGTACGCAATCGACGAAG
TCATCAGTGAAGATGGAGAAGAAGAGCTGGTCAAACAGTCACGTGACGAC
TCCGTGTTCGATCAAATAGCCAATCACAATAGAGCGGTATCAAAGGGTGA
CGAGAAGACTTGGTTGTTTGAAGCAGACATTGCTCTTGTGGACAAACCAG
AAGATGAAGATGATAACCAGAATGCAATCAATTCCAAGATGGTCCGCAAA
AGAGGGTTGAGAAGGTCTCAAGAGTATTTATGGATAGATCGGGTTGTTCC
TTATGAATACACAAATGAAATTAGTGTTTCAGGGCAGTCAGCCATTGATA
AAGCAATGCAAGAAATATCTACCAAATCTTGTATCAGTTTTGTCAAAAGA
ACAACGGAAAACAATTGGGTCAAATTTGTCAACAGAGGAGCgTGTTTCTC
GAGTGTCGGTCGAAGTTTCTGGAGAAGTGGTTCACAGGAGATCAGTCTTG
CACCGTCTTGTTTAACCAGTCATGGAACCATTATGCATGAAATACTTCAC
TCCTTAGGATTCTGGCATGAACAATCGAGACCTGACCGAAATCAATTCGT
GGAAATCATGTGGGAAAATATCGCTGAAGGTGAAGAGCACAATTTTGCAA
AGTACACACGTGGAGAATCAGACGATTTGAATTCTCAGTACGATTTATCC
AGTATTATGCATTACGGTCGATTCTCCTTCTCCAAGAATGGACAACCAAC
AGTGTTGGCAATCAGTGATCCAAACAAAAGGTTGGGACAGCGAGAAAAAT
TATCAGAAGAAGATGTGATACAATTGAACGCACTTTATAGATGTAAAGAC
GTTGGTAAAACATACAGTACTTGGTCTGAATGGTCTCCTTGCAGTGATCA
ATGCGTGAAAACGAGGCAGAGATTTTGTCCGAATCATAATAAAGCAAGCT
GTCCGGATGCAAGCCGGTTTGGTGTTCACACTGAGCATGGAGTTTGTACA
CAGGCTGAGTGCAACAaaaaaagggacGGTCATTGGGGCCGGTGGTCATC
TTGGGGTGAATGCAGTTACAAATGTGGCCAAGGGACGCAACAAAGAACAC
GAAAATGTGACGATCCAGCACCTAAGAATGGAGGAGCACAGTGTCCTGGT
GAAGCCACACAATCTACTGGATGTTTCCTGAAACCTTGTGGATTAGGAGC
AAATGATTGTTTATTCGACGGTCAAGGAATGTGTTTTTGGAAGGACGCAT
CAAGCAGTACAAATTACATGTGGAAAAGACACAAAGGGAAAACACCGAGT
GGTCGAACTGGACCTAATTGCGATCACTCTACTGGACAATCAACACGTGA
CGGACATTACATGTACACAGAGTCGTCCTCACCGGCCAGAACTGGAAATA
AAGCATCTCTGATCAGTAACAAGATATTCTCTGCCACACTTGGTCGTTGC
GTCACCTTCTTCTATAGTATGCATGGACTCGGTTGTGGAGCAATGAGACT
CTTTGTTGTCGATGTTGGCTCAGGAGTTGAGCACAAAGTATGGGAGAAGA
CTGGACCCCAAGGTTCAGCGTGGAAGGAAGCAGAAGTCGATGTCCCTTAC
AATACAGATTATAAGATTCGATTTGAATCAGAACGTGGACCATCTTTCCA
AGGAGATCTTGGATTAGACGACATCTTCATAGCAGAAGCGAAATGCTCAG
AGAAACACAATCTCGGGCCGAAAGAAAAGCCGACGACCACCCCAGTCACC
AcgacaacaacaacgacaaccACAACGACCACAACAACAAGAGCTCCAAC
GACAACCATGG
Run BLAST on NCBI

transcript from alignment at scaffold_142:853858..861493-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048401 ID=TCONS_00048401|Name=TCONS_00048401|organism=Clytia hemisphaerica|type=transcript|length=7636bp|location=Sequence derived from alignment at scaffold_142:853858..861493- (Clytia hemisphaerica)
GAAATTTTTGAAACCTTTCCTCTTGCACTCAGGATAGCGAATAAAAATAG AAAATCAAGGAGACAATGGCATCATTTGAGAAAGCATACTTGGTTTTATT TTTGTTATCCTTGGTCATCTCGTCAGTTCATTTGTACGCAATCGACGAAG TCATCAGTGAAGATGGTAAGTATTGGCCAATCTCTCTAAAGATAAAAAAT GAAATGTTTTGTCTTATATGATTTCAAGAAAAATCTGTAAATTTTCCTAA TAAAAAGCCTCAAATCAATGGTTTTAATGAAACGGGGGTGTCTGGTCAAT GAAATCAGAAGATGAGGACTAAGCTTACGGTAAAGGAAATGGCGTTACGT TGCATGGAAACTACCTAAATGATCTGAGATTCGATATATTACGGTTTACG CTCTCTAATTTGATGTTCTCTACTATTTGATATGCTCCAGTTTTCAATAA TAGAAAAAACGAATTTCTACTATATTTGATACGCTTCTTTATTCGGTAAA AAACCAATTTCCTTTGAAAATCGAATTAGAGAGGCTAGAGATCGTCAACT GTATAAGACAACCCAAAATGCAAGCCGATCAAAAACCTGCTTAATAATCT TTCTTCGTGCATTACGTCATAGCAGGAGAAGAAGAGCTGGTCAAACAGTC ACGTGACGACTCCGTGTTCGATCAAATAGCCAATCACAATAGAGGTGAGG AGACACATATGATATATTTTTAATTTGTAAATATACCATTCTAATTTGTG ATATTCATGGCGTAATATTTTATACGGAAATACTTAAAAATGGTGAAAAT GGGGTTCAAAATTCCGGTCATCAAAAAAAATCGTGCACCCCTGTTGAGGA GGTCCATTTCCGATCCAAGGGGGTAAGGTTTGAAATGCAGTGGAATTCCA TAAGGGTAGACGAAAATCCGTCAAAAATAAGCGGAATTCCAATTGGGTAA TGATTGAAAATTTGTAAAATTTTGCAATTCCAGAGGGGTAAGATCCTAAA ATTGCCTGGAATTCCAAGGGGGTAGGTCACAAAAGGTTGGACCTCCTCAA CAGGGGTGCACGGTTTTTTTCTGGAAAAGCCCAATTTTGTTCACTTCCCA ATGAATATAACATGAATAGATCTTATCGGACTTTTTGATTTTTCTAAAAA AGCGATACATTGTTGTGGTGTTTTTTCGGGGGTATTACAATAGAAATCTC TTAGTCTATTGTAATACCCCCCGAAACAATTCCACAATGCGTTGCTGTTT TAGAAAAATCTAAAACTCCGATAAGGTCTATTGCATGAGGGTACTATAGA TCAGTCACTGTTTCATTTTCACAATTTCAGCGGTATCAAAGGGTGACGAG AAGACTTGGTTGTTTGAAGCAGACATTGCTCTTGTGGACAAACCAGAAGA TGAAGATGATAACCAGAATGCAATCAATTCCAAGATGGTCCGCAAAAGAG GGTTGAGAAGGTCTCAAGAGTATTTATGGATAGATCGGGTTGTTCCTTAT GAATACACAAATGAAATTAGTGGTGAGTCTTTCTTTTTTTTCGATTTCAT TTCTGAATTGCAAGATAAATATTTTGTTACCTTTATGATTTAAATGTCCA AGTTTGTTCTTGAAACGGGCTTTTAAATACTAAAGTATATCGTTAGCCTT TTCGCCACACGATCAGCCTTATCAAAAAATGTCCGATAAAGATCGTCGAA TTCGAGTTTTCTGAACTTGTTAATCTTTCTAACAATTACAATTTATTCCA CTCAGTTTCAGGGCAGTCAGCCATTGATAAAGCAATGCAAGAAATATCTA CCAAATCTTGTATCAGTTTTGTCAAAAGAACAACGGAAAACAATTGGGTC AAATTTGTCAACAGAGGAGCGTAAGTTTGTTTTGAGCTATGTCATCTAGA GTTAAACAGATAACCTACTTACTTTCCCCCTTGCCTCCATCATGAGGCTT TTGGCCTCAGGTTGGTGACAATATTGTAGATTTGAATAACTATACTATAT TTTCGCACTGCATTCATATTTTTGAAAACAGGTACCGGTGATAATAGGTA ATTCCACAGTCGAAATGGATTATGGGTAATCAGGACTGATTGCGCATCCA TAACGCCTTTCTGTTGACGAGACGCAATAATCTTCAAAATTTTTCAAAAC TTTAGACCATAATAGAAAGTCGTCATTAGCGCGCAGTGGTCCTGATTACC CATTACGCTTTGCGACTGTAAAATGGCCTATACCTAAAATCCAATATTCA CTGCCGAATTCCATTGATCCACAACAGGTGGTTTTTTTCACTTTCAGGTG TTTCTCGAGTGTCGGTCGAAGTTTCTGGAGAAGTGGTTCACAGGAGATCA GTCTTGCACCGTCTTGTTTAACCAGTCATGGAACCATTATGCATGAAATA CTTCACTCCTTAGGATTCTGGCATGAACAATCGAGACCTGACCGAAATCA ATTCGTGGAAATCATGTGGGAAAATATCGCTGAAGGTGAGTTCGGGTTTT TCCGGAAATAGTCCGTGCCCTCCTGTTGAGGATATCGGATATCCAGGAGG TTAACGATTTTTGTTCAAAAGTGGATACCCAAGGGGTTAAATATCTACAA GGGAGCGGATATCCAGGGGGTAAAGTGTCTTTTCAAGTAAAAAATACGAT ATCCAGCCTAGCTGGCACACAACGTTATTTTAAGGTTCATCTAACGTTAT ATGGATGTTGTGAACGTTAGATAAACGTTGAAACAACGTTGTGTGCCAGC TGGGAGGGGTAAGCATCTTTATAAGTTTGTTGTGACAGGATGTTAATCAC TTTAGTGAAAGTCATTGCAATTCAACCAGCGATACTTTAGATACACTAAT TACTCTCTGGGCGTGTGACACCTTAGCAATACTCTTCAGCAACATTTCGA AACCTCGCTGTTGCAAGGAAAATAGGTATTTTTAGGGCAATGATAGACGC TTTAAGGTTCAGTTGTTTGTTTAAATAATCTGTATACCTCTAAGAGGAGT ACTTAAAGCCTTTTAGCACTTTCCAGGAATTATATGAGTTGTCCACGAGT AGAGATGGTTATTCGAATTGCAAAGGATGTCCAAGTTCTGAAGGGGTCCA AAATTTACGAGGGAGAGTTTTTTTAGCCATTGACTCTCCCTAAATTTTGA GCCCCCCTCAGATTCACCCGGTGTCAATCACTTCAGTGTTTCACCTTTCT ATCCACTTTCAGGTGAAGAGCACAATTTTGCAAAGTACACACGTGGAGAA TCAGACGATTTGAATTCTCAGTACGATTTATCCAGTATTATGCATTACGG TCGATTCTCCTTCTCCAAGAATGGACAACCAACAGTGTTGGCAATCAGTG ATCCAAACAAAAGGTTGGGACAGCGAGAAAAATTATCAGAAGAAGATGTG ATACAATTGAACGCACTTTATAGATGTAAAGGTATGGATGATCGAGTCAA ATTATCCTGAATCATACTTTTAGTTTAGTCTCGTCACTTTACCCAGGCTC TATTTGCGTTATGCTACTGTAAGTAAGGAAAAGTTGATTATATGCGGAAA CGCAGCTAAATTTTAGTTGAATAGCTGTGTAAACTGGATACTTATAAAGT CGTTTTGTGAGAGTGTTTTCGGCGCACGAGTCGAGCTGCTGATATCCAGT TTTTAACATTCCCTAGATAGATTTAATGTCCATCAACACCAATATTTAGA CTTAAAGGTAAAAAAATCCATTCGCTTTAAGTGTGCACTCTTTTTGGCTA CCATATGAAAACCATGTCGCGTATTAAGACTATAATACTCCGTTGGTGAC AAAAGGATTGCTTAAAGAGAATGGAATTTTAGTGGCTTTTCTTCTTTTCT TAATTAAGGGTACATGCAAAAACTCAAATTCAATTTGTTTCATTTTAGAC GTTGGTAAAACATACAGTACTTGGTCTGAATGGTCTCCTTGCAGTGATCA ATGCGTGAAAACGAGGCAGAGATTTTGTCCGAATCATAATAAAGCAAGCT GTCCGGATGCAAGCCGGTTTGGTGTTCACACTGAGCATGGAGTTTGTACA CAGGCTGAGTGCAACAGTGAGAAATACTATATTTTTTAGAATCTCTCCCT CTTTGATATAAAACAGCCTTAAAAGTTTACTTTTAGTATAAGGAATGTTT TCAACATAAAACACACAATAACGTAGTTGGTCAAAGAAATTTGGGCAAAT TGGAGAAGGAATTTTCGAAAGTTTGAATTTTAGCACCCCCTTTTAAAAGT AAATCATATTTGTAAAATTTACGCAACAGCCAGTACAAATATTTTGGTTG CAAAAGTCACCAAACATTTTCGTTTTTCAGAAAAAAGGGACGGTCATTGG GGCCGGTGGTCATCTTGGGGTGAATGCAGTTACAAATGTGGCCAAGGGAC GCAACAAAGAACACGAAAATGTGACGATCCAGCACCTAAGAATGGAGGAG CACAGTGTCCTGGTGAAGCCACACAATCTACTGGATGTTTCCTGAAACCT TGTGGATTAGGTAGGTCTAAGTATTTTGTATTTTAGAGAAGCGTCTACGA ATACACCTAGAAAGTATATCTTTAAAAATTATATTAGTTTAACGTTTAAA ATATCAGTTTATTCATCCCACATGTAATTTGAATCTGAAAAATGCCCCAC ATGACTGAATAATAGGAATTACTTGGACTAGAGATAGAGGTCCAATATAT TCATGATCAAAATAAATAGTATGGTTTGTTTAATACACAATTTAACTTGT GTCAAAAGGTTATTAGATTTCATCGGTCTTGTTAGATCTTGAGTCAAATT TATAAAAAAAGTCCTTAAAAGTGACTGAAAACTCAGACTCAGACTCTAAG CAGCCAATTCCTGTCTTCGGTCACGTTCCAAAAATAGTTATTTTCTGTTA AATTATTCTCCAGGAGCAAATGATTGTTTATTCGACGGTCAAGGAATGTG TTTTTGGAAGGACGCATCAAGCAGTACAAATTACATGTGGAAAAGACACA AAGGGAAAACACCGAGTGGTCGAACTGGACCTAATTGCGATCACTCTACT GGACAATCAACACGTGACGGTAAGTCAATCAAACAGACACAAAGTGAATC TATAACGTTCATGAAACGTAGAAGCAACATTGTGTGTGTTTGTCAGCTAA TTTTATTCTTGAAAGTAAATATAAATCTTGAGATCTACAATAGTTGCCAA TCCTCCAGACAATGTTGTCTGCGCGGGATATGGACCGGCCAAGGGCTCTT CCAGAAAAAATCCGTTCATGGGGGGTGGAGGATATATTATTTTTTTCATG AATTACCCCTGGACATCTTGATTTTTAACCCCCTGGACACGGGTTATACC CCTGGACAAAAATCAAATCAACCCAGTGGACACAAAAAATTACCCCTGGA AATTGAAATTTACCCCCTGGACATTGCAATTTTTTGGTACTTTTTCAATA CCCCTGGACAATTCATCCTCCACCCCCCATGAACGGATTTTTTCTGGAAG AGCCCAATGAAGCGTTCTTTTCCGTCAATATTGCTCGTAGGGCTAGCGGA GGTATTGCCTTGTTTCTAACTTTGACCAGCGGAAATGCCATTATATATTG GCAAAAATTGTAGCAAGAATCAATTAATGTCCTATTTCTTGGAGTAAACT TAAGAATTCCTCTGAGAATCAATTACCATAGCAAAAACGAAACTAACGTT GTTCATAGTGTAATTTATGAAAAGGTCTATCAATTGAAAAGAGTGGTAGG TCGGTGACAAGAGCAGCTATGGCCACTTAAATAGCACTCATTCAAGAAAT GGTGGTCTAGGTGCTAATAATTAGTAGGTGAATTACGACCTTTGTATTAT TTTACCTTCGTAATCATTTCAGGACATTACATGTACACAGAGTCGTCCTC ACCGGCCAGAACTGGAAATAAAGCATCTCTGATCAGTAACAAGATATTCT CTGCCACACTTGGTCGTTGCGTCACCTTCTTCTATAGTATGCATGGACTC GGTTGTGGAGCAATGAGACTCTTTGTTGTCGATGTTGGCTCAGGTAAGGA ATAGTTCCCATTTCTAAATCAAGAGTTGTATTCTAACAGTTCCAAGTTTC ACGATGAAAGCCATTACTGAAAAAAGCAAAGCAAAATTTTGAAGATTTTA ATACACACCGAGAAGCATAGTAGCATAATAGTATTTTCAGTAGTTTTTAT CACTCGCGTACTTAGATGGAAAAAGGTCAGTCAAAATAACGGAGAGTACT ACTAGTACTTTTCAGAAATTTCAAACTGTTTCTCATCAAGGCAGCCTAAG TATCATATTAAGACTCCAAGCCCTAATCATCATCAGCAAATCCTTGTCAC AACTTAAGGGAACTAACTTCGCTAAGGAGACTTGATTCTTTATTTTTGCA AATTCTGATAAAACTCACTAAAACTAGTTCTCATAAAGCATGTAAAAGAA GTGACCGGTTACTTGAACTACAAGATATCATCATTGCTTTTTGTAGGAGT TGAGCACAAAGTATGGGAGAAGACTGGACCCCAAGGTTCAGCGTGGAAGG AAGCAGAAGTCGATGTCCCTTACAATACAGATTATAAGGTAAACCGTGGA ACCTAACCTCTACCAATGAAATTTGCACATGTAGCTAAGGGGAATTTCGT TGGAAAGGTTATTACTTCAACCAGGCCTAAATCGTCGATGTAGCAATTTT TGCATTGCTAATTACGCCAGCTGACAATATGTGTCATGTTGCTTTATAAA TCTCATCCATATGCATCTCTGCCATATGTAAAATTCTATGAGCACAGTTG ATGTTCTCAAATTCGTTTTCAAGGGGAATATAACTTTATCGAATACACAG CATCGTTTATAAGAGTTTCTTGTTGACGGTGACTTTCAATATTATCGAAT AAGGGAGTGATTCGAATAATAAAGTGTCGTTTATAAGAGTTTCTTGTTGA CGGCGACTTTCAATATTATTCTCGAATAAAAGACTGTATCAAATAGTAGN GGAAAGGTTACTTCAACGAGGCCTAAATCGTCGATGTAGGAATTTTTGCA TTGCTAATTACGCCAGCTGACAATATGTGTCATGTTGCTTTATAAATCTC ATCCATATACTTCTCTACCATATGTAAAATTCTATGAGCACAGTTGATGT TCTCTAATTCGTTTTCAAGGGGAATATAACTTTATCGAATACATAATAAT AATAGCGTCGTTTATTGTTGACGGTGACTTTCAATATTATCGAATAAGGG AGCGCTTCAAATAATAAAGTGTCGTTTGTAAGAGTTTCTTGTTGACGGCG ACTTTCAATATTATTCTCGGATAAAGGAGTGTATCAAATAGTAGAACGTC GAATTAGAAAGCGTCAACTCTACTCCCTATAGAATCAGATCAAATTTATA AAAAGATCTGCTCGTAATTACTTGAATTTTCTTGGACTAGATTCGATTTG AATCAGAACGTGGACCATCTTTCCAAGGAGATCTTGGATTAGACGACATC TTCATAGCAGAAGCGAAATGCTCAGAGAAACACAATCTCGGGCCGAAAGA AAAGCCGACGACCACCCCAGTCACCACGACAACAACAACGACAACCACAA CGACCACAACAACAAGAGCTCCAACGACAACCATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030794XLOC_030794Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048401-exon-scaffold_142-1575043694:861329..861493TCONS_00048401-exon-scaffold_142-1575043694:861329..861493Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:860800..860868TCONS_00048401-exon-scaffold_142-1575043694:860800..860868Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:859972..860163TCONS_00048401-exon-scaffold_142-1575043694:859972..860163Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:859624..859738TCONS_00048401-exon-scaffold_142-1575043694:859624..859738Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:859009..859196TCONS_00048401-exon-scaffold_142-1575043694:859009..859196Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:858063..858281TCONS_00048401-exon-scaffold_142-1575043694:858063..858281Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:857428..857595TCONS_00048401-exon-scaffold_142-1575043694:857428..857595Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:856984..857163TCONS_00048401-exon-scaffold_142-1575043694:856984..857163Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:856425..856580TCONS_00048401-exon-scaffold_142-1575043694:856425..856580Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:855451..855621TCONS_00048401-exon-scaffold_142-1575043694:855451..855621Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:854906..854997TCONS_00048401-exon-scaffold_142-1575043694:854906..854997Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1575043694:853858..854053TCONS_00048401-exon-scaffold_142-1575043694:853858..854053Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:861329..861493TCONS_00048401-exon-scaffold_142-1510915933:861329..861493Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:860800..860868TCONS_00048401-exon-scaffold_142-1510915933:860800..860868Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:859972..860163TCONS_00048401-exon-scaffold_142-1510915933:859972..860163Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:859624..859738TCONS_00048401-exon-scaffold_142-1510915933:859624..859738Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:859009..859196TCONS_00048401-exon-scaffold_142-1510915933:859009..859196Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:858063..858281TCONS_00048401-exon-scaffold_142-1510915933:858063..858281Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:857428..857595TCONS_00048401-exon-scaffold_142-1510915933:857428..857595Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:856984..857163TCONS_00048401-exon-scaffold_142-1510915933:856984..857163Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:856425..856580TCONS_00048401-exon-scaffold_142-1510915933:856425..856580Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:855451..855621TCONS_00048401-exon-scaffold_142-1510915933:855451..855621Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:854906..854997TCONS_00048401-exon-scaffold_142-1510915933:854906..854997Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1510915933:853858..854053TCONS_00048401-exon-scaffold_142-1510915933:853858..854053Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:861329..861493TCONS_00048401-exon-scaffold_142-1491911889:861329..861493Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:860800..860868TCONS_00048401-exon-scaffold_142-1491911889:860800..860868Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:859972..860163TCONS_00048401-exon-scaffold_142-1491911889:859972..860163Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:859624..859738TCONS_00048401-exon-scaffold_142-1491911889:859624..859738Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:859009..859196TCONS_00048401-exon-scaffold_142-1491911889:859009..859196Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:858063..858281TCONS_00048401-exon-scaffold_142-1491911889:858063..858281Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:857428..857595TCONS_00048401-exon-scaffold_142-1491911889:857428..857595Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:856984..857163TCONS_00048401-exon-scaffold_142-1491911889:856984..857163Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:856425..856580TCONS_00048401-exon-scaffold_142-1491911889:856425..856580Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:855451..855621TCONS_00048401-exon-scaffold_142-1491911889:855451..855621Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:854906..854997TCONS_00048401-exon-scaffold_142-1491911889:854906..854997Clytia hemisphaericaexon
TCONS_00048401-exon-scaffold_142-1491911889:853858..854053TCONS_00048401-exon-scaffold_142-1491911889:853858..854053Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:853858..861493 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.0230904 1.20874 0.86224 0.638268 0.697895 1.08107 0.559534 0.464607 4.06655e-07 22.059 21.1767 0.0790017 0.304853 2.18973 4.0279 108.649 137.682 13.6681 19.82 7.5613 13.0607 16.486 15.8832 0.0857468 0.0610075 3.59416 4.82614
Blast
BLAST of TCONS_00048401 vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 6.957e-39
Identity = 85/228 (37.28%), Postives = 121/228 (53.07%), Query Frame = 3
Query:  264 LFEADIALVDKPEDEDDNQNAINSKMVRKRGLRRSQEYLWIDRVVPYEYTNEISVSGQSAIDKAMQEISTKSCISFVKRTTENNWVKFVNRGACFSSVGRSFWRSGSQEISLAPSCLTSHGTIMHEILHSLGFWHEQSRPDRNQFVEIMWENIAEGEEHNFAKYTRGESDDLNSQYDLSSIMHYGRFSFSKNGQPTVLA-ISDPNKRLGQREKLSEEDVIQLNALYRC 944
            LFE DI L     D    +N+I             ++Y W    +PY   + + ++ +  I  A +    K+CI F     E N++       C+SSVG    R G QE+S+  +C     T+ HE LH+LGFWHEQSR DR+ +V IMW+ I  G EHNF  Y+   SD LN  YD +S+MHY + +F    +PT++  ISD    +GQR   S+ D+++LN LY C
Sbjct:   48 LFEGDIRL-----DRAQIRNSI-----------IGEKYRW-PHTIPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNR--RVGKQELSIGANC-DRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNC 255          
The following BLAST results are available for this feature:
BLAST of TCONS_00048401 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B6.957e-3937.28Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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