TCONS_00048377 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048377
Unique NameTCONS_00048377
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048377 ID=TCONS_00048377|Name=TCONS_00048377|organism=Clytia hemisphaerica|type=transcript|length=3426bp
CAAAGTATCTCTACACCAAAAAATAACGTTACTAGTATCAAGgctaaaaa
gttcattttttccaatcttcattttcaaagacTCTTAAAAGTTATAGTAC
TCTAAATTATCTTTGTAACGGTATGTATGATTTGTTTGAATTGGAGCATT
GGTTGAAAAATAGCAGGCAAATCAGGACACTTGAAGCGAATTGACTTAAG
TTAAGTTGGTCATTCCTTATACAGTAATGAAATCTTATGTGTTTTGATTG
ACCACTTGGTGCTTTAATCGAtttcacatctttttagaaaaaaaactcaa
aaatggcGGACTACACAGATGATATGCAcataaaaatgtgtaaaaaaatt
gcacaattgacaaaagtaatttacAATTTAAATTCAAGAGCTGAAGAAAG
TGACACTATAATTGcaaacatgaaaaaagaataCAAAGCTAATATTACAA
GAATAATGGAGGAAAGCAAGAACCAAATCTTTTCATGCAAAGCCAAGTAC
CAAGagtatgaaaattttgaaaaacaattaaaaaaatcaactgATGTTTT
GAAAGAGACTGAAGAACAAAATTTAAGATTACAGAAAATTTTGGAAGAAA
CTGTTGAGAGGTCAAAATTGAATGAGAATAGTTTGAGAACTGATTATGAG
AATAAATTATTGGATTTACAGAATAAGTTGTTGGAGAGGAAACGAGAATA
TGGTGAACTTTTGGATAGGTTTTCATCTTTTCAGAAAGATCTAGATGCTT
CTAAACGTGGGAAAATAAGTGAAGTCAATAATCAACATGAGCAGATAGCT
GTTATGAAAGAGAAATTCGAAAAGGAAGTTTTAAGAAATAAAGAGAAGCA
AAATGAATTGAGGGACACCATCGAATCTATTCGAGCAGAATATGAAATTG
ATCGTAAAAATTGGTTTGGTGAAAAGGATCAAATCCTAATCGAAAATgaa
gacaaaattttgaaattgaagcaGTTGCATGCAAGGGAATTAGCCTCTCT
AGGAGGCCAAATCAAGACAAATGagtttgaaaaacttgaaaatgaaaaac
agaaattaatcAAAGATTTCGAGTTGAGAAAAACAGAATTTATTAATAGG
ATTCGATTCTTAGAGAAATCTCTCagtcaaaatgaagaagaaaacgaaga
gatGAAAGCAAGTAACACAAATTTACAAACACAAGTTATTCATTTTGAAA
AGACACTTGCTTCTGTCAATTCGGAACTCAAAGAGAAAATTGTCCATTTG
GAACGTATAGAATCAGAAAGGAGACGAAACACTGACGATTTTTCAAAACA
GATTTCCAATCTTGATCAAATGAAGACACAACAAGAAGcttCTCTTGTCA
AATTGAAAAGCAAATTGGATTCTCAAGCAAACGAGTTGAACGAAacaaaa
atccataaaaagGAACTTGAAAAACAATGCTCATTGTTAGAAAAGGAAGT
GGTGACATGGAAAGACAAATTTGACAGTGAACACAATCGATATCAAATAA
ATCAGAATGAAATTCAGAACCAATTCAATACCGTTAACAATCTTCAACTG
GAAATCCAAAaacttcaatcaaaaattaaaattcttgaaGATAAGAGTCA
AACAGACTTGAAAACTTTACAACAAAAGCAAACCAGTGAGCAAGCTAAAG
AACAGAAGAAACATACACAAGACATCTCACGTTTTAAAGAGGAATCCGAA
AGAATCCTGAAAGAAACACAAAGCTTGCTTTTGGAACAGTTCGAAAAAGA
TAAACAAGCAATCAAACTAGAGTTTGATACTAAAATCAATGATCTTAACT
CACAGCTAAAGGTTTTGGAAGAAAATCTTTCATCCAAGGCAAAGGAGGTT
GACCACCAAAACAAGACATTATCCACTGTCAACAGTAAGCTACACGATTC
GAATCGTCAATTAGTCGAGCTTCAAAAACAGTATAAAGACCAGAAGAGTA
TGCTGGGCAGTGCTATGGAGAAAAACAATGATTATAAGAAGCTTCTAGCT
GATACCCAGTCTGGTGCTTCAAACGAGAAAGAACAATTTCTTATGgaaca
aaaacacaaagaacaAGAATTTCAACAACGaatagaaagaatcaaagaac
tAATGCGAAAAGAATCTTCCGAAAATATCAGGAATTTGACTGAAGCTCAC
CAGAAAGAGTTAAGCGAGAAAATCACCCAGCACAACCTTATCATAGAAAA
GATGAGACTAGAGTCAGAACAAACGAGACAACATAAAGAAAACGAGATAC
TGCTTTTacaaaatgacCTCAAAATGTTATCCGAAAAACAAGATAGAAAT
CGTGAAAGCTTATCAAGCCAGCACCTGACACACCAACAAGAAATTACAGA
TCTTAAGAAGGCCTTTGAACAACAAAAAGAGGAGATGTTAAATGATTTTG
AGCGACAATTGAGTACACTCAAGGACACTTCTGTCGAAGAAATGACCAGA
AAAGAGGACGGATGGCACGAGATGATGAAGCAAGAAATGTCGACCATTTC
AGCAGATCATCAGCGTGAACTTGAAGAACTACACAAATCAAATCAATTAT
TGCTGACGTCGCTAAAAAGTCAATTGGTTGCTGAACAGAAAGCAGAGAGT
GAAGAGCTAAAAAGGAATTTTGCAATTGAAAAAGAAAAACTGCAAAATGT
GTTACAAATTCAGCACGAAGAGCGATTGAAGCAAATTATGAAAGACTTCG
AGAAAGAGATTACAACTCAGAAAGATGAACTCTCAACCAGTAAAGACCTT
CGTCAGAAAGAGGTATGTTTTCTTTCCATTCTTCagttcattttttccat
ttttctgtCAACAAAAATTTTACGTTTTGGCCAAAGttaagtcaaaattt
taaaggCTAGTTTTTTTAGActataggaaattttgaaataaaatgtgCTT
TGCTCAAAAGTGAAGGGTGCTATCTCTCCAATGTGTCGGGACTATGCTTG
AAGCCAAGGCTAAAAACAACACTGAACACTTAGATATTCCCTTTGAGAGA
AAATGAATGCACGAATCAAAACAGAATGATTTAAAGAGAGTGGTTTAAAG
TcatcaatttaattttaattatgattttgttttctttttaccaAAAGGAT
TCGCCCACTCGAGCGGTATTCTATTCTCTAACGAAATATCGATTTGGGAT
TTTTGTGGCGGAAACTTTCTTCCACCCaccgttatttttattttgttgaa
aaccTATTTATTTTTAGCTTTTACATTGTTTTAAAATCGTTCATCGAACT
GTAAGGGTTACTTTCAGATAGGAAAAGAGGTTTTGTTTCGATTTTATTCA
CACCTTTGCTTTATTGAAGATTTTTTCCCGTCTTCATTGGAAAGTGTTAT
TAACTCATTGATTGTTGtgtgttaaaaaaataaagaaaattaatctAATC
TATTAGAGACGTGATTATTCCGTCAG
Run BLAST on NCBI

transcript from alignment at scaffold_142:488645..496461-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048377 ID=TCONS_00048377|Name=TCONS_00048377|organism=Clytia hemisphaerica|type=transcript|length=7817bp|location=Sequence derived from alignment at scaffold_142:488645..496461- (Clytia hemisphaerica)
CAAAGTATCTCTACACCAAAAAATAACGTTACTAGTATCAAGGCTAAAAA
GTTCATTTTTTCCAATCTTCATTTTCAAAGACTCTTAAAAGTTATAGTAC
TCTAAATTATCTTTGTAACGGTATGTATGATTTGTTTGAATTGGAGCATT
GGTTGAAAAATAGCAGGCAAATCAGGACACTTGAAGCGAATTGACTTAAG
TTAAGTTGGTCATTCCTTATACAGTAATGAAATCTTATGTGTTTTGATTG
ACCACTTGGTGCTTTAATCGATTTCACATCTTTTTAGAAAAAAAACTCAA
AAATGGCGGACTACACAGATGATATGCACATAAAAATGTGTAAAAAAATT
GCACAATTGACAAAAGTAATTTACAATTTAAATTCAAGAGCTGAAGAAAG
TGACACTATAATTGCAAACATGAAAAAAGAATACAAAGCTAATATTACAA
GAATAATGGAGGAAAGCAAGAACCAAATCTTTTCATGCAAAGCCAAGTAC
CAAGAGTATGAAAATTTTGAAAAACAATTAAAAAAATCAACTGATGTTTT
GAAAGAGACTGAAGAACAAAATTTAAGATTACAGAAAATTTTGGAAGAAA
CTGTTGAGAGGTCAAAATTGAATGAGAATAGTTTGAGAACTGATTATGAG
AATAAATTATTGGATTTACAGAATAAGTTGTTGGAGAGGAAACGAGAATA
TGGTGAACTTTTGGATAGGTTTTCATCTTTTCAGAAAGATCTAGATGCTT
CTAAACGTGGGAAAATAAGTGAAGTCAATAATCAACATGAGCAGATAGCT
GTTATGAAAGAGAAATTCGAAAAGGAAGTTTTAAGAAATAAAGAGAAGCA
AAATGAATTGAGGGACACCATCGAATCTATTCGAGCAGAATATGAAATTG
ATCGTAAAAATTGGTTTGGTGAAAAGGATCAAATCCTAATCGAAAATGAA
GACAAAATTTTGAAATTGAAGCAGTTGCATGCAAGGGAATTAGCCTCTCT
AGGAGGCCAAATCAAGACAAATGAGTTTGAAAAACTTGAAAATGAAAAAC
AGAAATTAATCAAAGATTTCGAGTTGAGAAAAACAGAATTTATTAATAGG
ATTCGATTCTTAGAGAAATCTCTCAGTCAAAATGAAGAAGAAAACGAAGA
GATGAAAGCAAGTAACACAAATTTACAAACACAAGTTATTCATTTTGAAA
AGACACTTGCTTCTGTCAATTCGGAACTCAAAGAGAAAATTGTCCATTTG
GAACGTATAGAATCAGAAAGGAGACGAAACACTGACGATTTTTCAAAACA
GATTTCCAATCTTGATCAAATGAAGACACAACAAGAAGGTGCGTGTTGAT
TTCTATGTTTAAAATTTCACTACACTTTTGAATTGAAACATAATTTAGTC
TCAATGAAAATATAAAATTTTTCCTTTGAAATTGTATTAAACTTTGAGAC
ACTTTTTTGTTCAATTTATAACTCAAGCTATAATATGAAACTAAACACCA
GTTAAACACCATCTGTCAAACTAAATGTAGTCATCATCAAACATCAAGTG
TATAATGAGTTCTTATTTCAGCACTTTTTGAATGTTTTTGTGGAATTTTG
GCAGAAACGTGAAGTGAAAACGTGAAATTTCTACAGTATGTGAAGCCTGC
ATTTTCTTAAATCTTTGGCTCAGCTCTATGTCCTTATAGTACCTTTTTCT
TGTAAAAGTACTTAAAATAATTGATAATTTTTTAACAACATTAGTAACTT
GTGGTGAAAAATTGATCTATACCAAGGTCCAAGGTAGAGCTAAATTCAAA
ATTTATTATTCTTTAAAAAATTAAAAACATGATAATTTTTTCATTTTTTT
TTAGCTTCTCTTGTCAAATTGAAAAGCAAATTGGATTCTCAAGCAAACGA
GTTGAACGAAACAAAAATCCATAAAAAGGAACTTGAAAAACAATGCTCAT
TGTTAGAAAAGGAAGTGGTGACATGGAAAGACAAATTTGACAGTGAACAC
AATCGATATCAAATAAATCAGAATGAAATTCAGGTTTGATAATCTTTACC
AATTTTCATGCAAAGGTTTTCCCATTCACTTTTTTTTGATAAAGAAGTAC
ATTATTGTTATTAGTGACCATATTATAAAAGTAGAGCACTCGGCTAGAGT
GTTTGTTGGTGTCAAACCCAGGCTGCCGGGCCATACCAAAGACTAAAACA
TAGTAAATGATGCCTTACTGCTTAACACTCAGCAGTTAAAAAGAAGGATT
TTAAGGCTAAATTGAATCTAGTTTGAAAGAGGGGCCTTCAGGTCGCTCAG
ACTAAAGTTGTTTGAATACTTCCCTTAGCCTCGTCGTTCACTTACAAACA
AGCTCTAAAAATAATGTAGAATCCAGATCTGATTTGCTTGGGCCATTTTT
AAGAAATAGTCTGTACCCCCTCCCCCGTATGTTTGGAAGGTGTTTCGTCC
AGGGTGGTCTGGATAACAAAATATCCAGGGGGTCACCTGTCCCAAAATAG
ACCTCATCAATTCTGGGATTGCNTTTAGTCTCAATGAAAATATAAAATTT
TTCCTTTGAAATTGTATGAAACTTTGAGACACTTTTTTGTTCAATTTATA
TCTCAAGCTATAATATGAAACTAAACACCAGTTAAACACCAACTGTCAAA
CTAAATGTAGTCATCATCAAGTGTATAATGAGTTCTTATTTCAGCACTTT
TTGAATGTTTTTGTGGAATTTTGGCAGAAACTTGAAGTGAAAACGTGAAA
TTTCTACAGTATGTGAAGCCTGTATTTTCTTAAATCTTTGGCTCAGCTCT
ATGTCCTTATAGTACCTTTTTCTTATAAAAGTACTTAAAATAATTGATAG
TTTTTTAACAACATTAGTAACTTGTGGTGAAAAATTGATCTATATACCAA
GGTCCAAGGTAGAGCTAAATTCTAAATTTATTATTCTTTAAAAAATTAAA
AACATGATAATTTTTTCATTTTTTTTAGCTTCTCTTGTCAAATTGAAAAG
CAAATTGGATTCCCAAGCAAACAAGTTGAACGAAACAAAATTCCACAAAA
TGGAACTTGAAAAACAATGCTCATTGTTAGAAAAGGAAGTGGTGACATGG
AAAGACAAATTTGACAATGAACACAATCGATATCAAATGAATCAGAATGA
TATTGAGGTTTGATAATCTTTACCAATTTTCATGCAAAGGTTTTCCCATT
CACCTTTTCTTGATAAAGAAGTAACATATTGTTATTAGTGACCATATTAT
AAAAGTAGAACACACAGCTAGAGTGTTTGTTGGTGTCAAACCCAGGCTGC
CGGGCCATATCAAAGACTAAAACATAGTAAATGATGCCTTACTGCTTAAC
ACTCAGCAGTTAAAAAGAATGATTAAGGCTAAATTGAATCTAGTTTGAAA
GAGGGGCCTTCAGGTCGCTCAGACTAAAGTTGTTTGAATACTTCCCTTAG
CCTCGTCGTTCACTTACAAACAAGCTCTAAAAATAATGTAGAATCTAGAT
CTGATTTGCTTGGGCCATTTTTAAGAAATAGTCTGTACCCCCTCCCCCGT
ATGTTGGGAAGGTGTTTCGTCCAGGGTGGTCTGGATAACAAAATATCCAG
GGGGTCACCTGTCCCAAAATAGACCTCATCAATTCTGGGATTGCCGTTCT
GAAAATTCCTTCTATCCTTTTTCTTTTAGAACCAATTCAATACCGTTAAC
AATCTTCAACTGGAAATCCAAAAACTTCAATCAAAAATTAAAATTCTTGA
AGATAAGAGTCAAACAGACTTGAAAACTTTACAACAAAAGCAAACCAGTG
AGCAAGCTAAAGAACAGAAGAAACATACACAAGACATCTCACGTTTTAAA
GAGGAATCCGAAAGAATCCTGAAAGAAACACAAAGCTTGCTTTTGGAACA
GTTCGAAAAAGATAAACAAGCAATCAAACTAGAGTTTGATACTAAAATCA
ATGATCTTAACTCACAGCTAAAGGTTTTGGAAGAAAATCTTTCATCCAAG
GCAAAGGAGGTTGACCACCAAAACAAGACATTATCCACTGTCAACAGTAA
GCTACACGATTCGAATCGTCAATTAGTCGAGCTTCAAAAACAGTATAAAG
ACCAGAAGAGTATGCTGGGCAGTGCTATGGAGAAAAACAATGATTATAAG
AAGCTTCTAGCTGATACCCAGGTAATTTTTTAGCATTTGGTCTTTTGGGT
TTTCGTATATTCTAAGGATCTTAGGAAGAACATCTTTGGGAAATGTCTCG
ATTTAAACAGGATATAATTTGACCAGTAAAATTGACCATTAAAAACCATA
CGAGAGTCTATTTCATGCTTTGCCAAGGCACAAAATGGATTTCTAGATGT
TTTGTTGTGACTCTGGTGACTCAACGACAGATTCGAGTGTAGTTCGAAAA
TACATATATACTAGGTTTTCTTTTATCCATCTCCATTTATAGAAATCAAC
AATCTACAAACACTACAAACAAATCGAGTTGTATTTTTTAAAAGTTAAAC
TTCCTTATAGTCTGGTGCTTCAAACGAGAAAGAACAATTTCTTATGGAAC
AAAAACACAAAGAACAAGAATTTCAACAACGAATAGAAAGAATCAAAGAA
CTAATGCGAAAAGAATCTTCCGAAAATATCAGGTTTGTTCAGAATCACTA
ATGAATTCCCTTGCAAAATGGTGTTAACTGTTCTTTTCTTGCTAATACTA
ACAAATTTTGCCCTTAACAACTTTTATTCAAGTTTCACTCATGGTAATTT
TTTCCAAATTATAATATATAAGAACAAGAGCCAAACTATTAAGAATAAGT
TAAGAACATGCTTCGCGTACTCCAAAGCAACCAATTTCTTTGTGAAAGTG
GTGAAAATAAGAACATGTTAACAATTCTTTTAGGCTATAAACTTAAGTTA
AGAACATCATCCGAAGGCTTCATTCAAAACGTGTATGAATTTTTTTATGA
CATTTACTTTTAGGAATTTGACTGAAGCTCACCAGAAAGAGTTAAGCGAG
AAAATCACCCAGCACAACCTTATCATAGAAAAGATGAGACTAGAGTCAGA
ACAAACGAGACAACATAAAGAAAACGAGATACTGCTTTTACAAAATGACG
TAATGTTAAATCAATACACCTTTTCGACCGTAGTCGCGTGGTCAGGCGCG
TGCCACTTAATTATTTGATTATCCTTAAACTCGATTCAATCCTTTTTTGA
CACATTTTTCTATTGTCTATAAGTGCGAAAAATGGACTGGGACGGTTTTA
GTGGGATAAAGCGGACAAAAAAATGCCTGCGCGGTAATTCGCGGCTACAG
TCGAAAAGGTGACGTTGACTTTTTTCTTGATCTAGTGTCAATATGCTGTA
GACTCGGGAATTTATCAGATATTACCATCTTTCAGTGGCCCTATAAGAAT
TAAAGATTTTTGAAATAATGTCAGTGACACAGATTAGTCGACCAATTGTC
ATCTCTTTTTCAATTCTTCAGAATTCTTATATAATTTCGTAATATGAAGA
ATGTGACAAAAATACATTTTCCATCGAATTATTTTGTTCTTTCAACAGCT
CAAAATGTTATCCGAAAAACAAGATAGAAATCGTGAAAGCTTATCAAGCC
AGCACCTGACACACCAACAAGAAATTACAGATCTTAAGAAGGCCTTTGAA
CAACAAAAAGAGGAGATGTTAAATGATTTTGAGCGACAATTGAGTACACT
CAAGGACACTTCTGTCGAAGAAATGACCAGAAAAGAGGACGGATGGCACG
AGATGATGAAGGTTCGACTTTGAAACTTTAAAACAGAATGAATAAACACA
AAGTCAAGATGAAGTTAGGACGAAGATTTTTGTTTGAAATTTCATATTCC
GCTCAACTGAGCAGGTGTTGAAAAAGACTTGAAAATTTGGTTCCCGTATT
TACCACTCTTTTGGGATGGGATAGTCATTCATCATAAAGTCACATTTTCT
TTGGCAATAATTCTTAAAAGAAAACCTTTAGCCCAGTAATGAAAAAAGTG
TTACTATGGCCTAAGAACGTTCCATAGCCATATGTTTACATATTGCTTTT
AATTCTATTACACAGCAAGAAATGTCGACCATTTCAGCAGATCATCAGCG
TGAACTTGAAGAACTACACAAATCAAATCAATTATTGCTGACGTCGCTAA
AAAGTCAATTGGTTGCTGAACAGAAAGCAGAGAGTGAAGAGCTAAAAAGG
AATTTTGCAATTGAAAAAGGTAAAAGTTACTTTAGACGTACAAAATATTT
CGTAAACGCAAACCTTACCTTAGCTATTTTCGCGATTTTTAGCCTTTTTC
ATTAAAGTGCATGTTTTTGAAATAACGATTCGCGTTAAAAAGATTACTTT
AAAAAGCTGAAAATCATTGCACTCCTAGTTGAAACTTCAGTCAATTTGAT
CGTATGCTTTTAATCTTTTTAAATTCAAAGGAAACCTTTTTAATTGAATT
GGAATTTTTAACTCTTCACAATGTTTGATGAAAGTTTTGGTGAAAGAACT
CGCGAAAGTCTATGTTGTAATTTCGTGATTTCCCTACAAGTTAATGGTCG
CGAAAGTTTGTACGCCTAAAATATTTTCTACACCCGAACTGTCGTCTTTT
CTCTAGCAAGTCACAGTTCTAAAGATTATTTAAGATTAATTTATTTTTTG
AAAACTCTAAATAATATGAAAATGTCACCCTCAAAGTTAAAGACACGGTA
GAATAAATTCTGGTTAAAGGATGAACCAACTGCTACTAAGTTGAAATTTA
AAATCATTTCCTTATTGGAACTAATTTTCGGGGAAACTAATTTTCGCGGT
CGAAAAAATATCCGAAAAATTGCATTTCACGGGTTTTTATTTTCGTGGTT
TTTTTCATTCTGGAATTTTCACGAGTTTTAATTTTCGCGGTATGATCTTT
CTTTACCTGCATCGCTATGCTCCTTTTGTGAAAAAAGGGTGCGTTTTAAT
AAAATCTTTATTTTGTACTGAGGATCTGTTCACACACGGATTATATTCCA
TTCTTGTTGAATGTTACTATTTCAGAAAAACTGCAAAATGTGTTACAAAT
TCAGCACGAAGAGCGATTGAAGCAAATTATGAAAGACTTCGAGAAAGAGA
TTACAACTCAGAAAGATGAACTCTCAACCAGTAAAGACCTTCGTCAGAAA
GAGGTATGTTTTCTTTCCATTCTTCAGTTCATTTTTTCCATTTTTCTGTC
AACAAAAATTTTACGTTTTGGCCAAAGTTAAGTCAAAATTTTAAAGGCTA
GTTTTTTTAGACTATAGGAAATTTTGAAATAAAATGTGCTTTGCTCAAAA
GTGAAGGGTGCTATCTCTCCAATGTGTCGGGACTATGCTTGAAGCCAAGG
CTAAAAACAACACTGAACACTTAGATATTCCCTTTGAGAGAAAATGAATG
CACGAATCAAAACAGAATGATTTAAAGAGAGTGGTTTAAAGTCATCAATT
TAATTTTAATTATGATTTTGTTTTCTTTTTACCAAAAGGATTCGCCCACT
CGAGCGGTATTCTATTCTCTAACGAAATATCGATTTGGGATTTTTGTGGC
GGAAACTTTCTTCCACCCACCGTTATTTTTATTTTGTTGAAAACCTATTT
ATTTTTAGCTTTTACATTGTTTTAAAATCGTTCATCGAACTGTAAGGGTT
ACTTTCAGATAGGAAAAGAGGTTTTGTTTCGATTTTATTCACACCTTTGC
TTTATTGAAGATTTTTTCCCGTCTTCATTGGAAAGTGTTATTAACTCATT
GATTGTTGTGTGTTAAAAAAATAAAGAAAATTAATCTAATCTATTAGAGA
CGTGATTATTCCGTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030777XLOC_030777Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048377-exon-scaffold_142-1575043694:495124..496461TCONS_00048377-exon-scaffold_142-1575043694:495124..496461Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1575043694:494429..494607TCONS_00048377-exon-scaffold_142-1575043694:494429..494607Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1575043694:492291..492782TCONS_00048377-exon-scaffold_142-1575043694:492291..492782Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1575043694:491830..491951TCONS_00048377-exon-scaffold_142-1575043694:491830..491951Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1575043694:491363..491498TCONS_00048377-exon-scaffold_142-1575043694:491363..491498Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1575043694:490701..490913TCONS_00048377-exon-scaffold_142-1575043694:490701..490913Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1575043694:490243..490396TCONS_00048377-exon-scaffold_142-1575043694:490243..490396Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1575043694:488645..489436TCONS_00048377-exon-scaffold_142-1575043694:488645..489436Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1510915933:495124..496461TCONS_00048377-exon-scaffold_142-1510915933:495124..496461Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1510915933:494429..494607TCONS_00048377-exon-scaffold_142-1510915933:494429..494607Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1510915933:492291..492782TCONS_00048377-exon-scaffold_142-1510915933:492291..492782Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1510915933:491830..491951TCONS_00048377-exon-scaffold_142-1510915933:491830..491951Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1510915933:491363..491498TCONS_00048377-exon-scaffold_142-1510915933:491363..491498Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1510915933:490701..490913TCONS_00048377-exon-scaffold_142-1510915933:490701..490913Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1510915933:490243..490396TCONS_00048377-exon-scaffold_142-1510915933:490243..490396Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1510915933:488645..489436TCONS_00048377-exon-scaffold_142-1510915933:488645..489436Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1491911889:495124..496461TCONS_00048377-exon-scaffold_142-1491911889:495124..496461Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1491911889:494429..494607TCONS_00048377-exon-scaffold_142-1491911889:494429..494607Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1491911889:492291..492782TCONS_00048377-exon-scaffold_142-1491911889:492291..492782Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1491911889:491830..491951TCONS_00048377-exon-scaffold_142-1491911889:491830..491951Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1491911889:491363..491498TCONS_00048377-exon-scaffold_142-1491911889:491363..491498Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1491911889:490701..490913TCONS_00048377-exon-scaffold_142-1491911889:490701..490913Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1491911889:490243..490396TCONS_00048377-exon-scaffold_142-1491911889:490243..490396Clytia hemisphaericaexon
TCONS_00048377-exon-scaffold_142-1491911889:488645..489436TCONS_00048377-exon-scaffold_142-1491911889:488645..489436Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:488645..496461 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.02934	3.39027	1.51624	1.01802	9.30984	3.95091	2.77899	3.43203	1.66138	1.18278	1.7928	0.462718	0.249373	0.370692	0.743947	0.585224	1.29702	2.58214e-05	1.33645	0.729917	1.28752	1.38344	3.99122	3.20161	1.40665	1.41772	0.792386	1.40727	3.1305	3.18828
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048377 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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