TCONS_00048269 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048269
Unique NameTCONS_00048269
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2858

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048269 ID=TCONS_00048269|Name=TCONS_00048269|organism=Clytia hemisphaerica|type=transcript|length=2858bp
ACTCTTTTATGTTCGATTGTTataattaatattttctttttcacaccTCG
CAACATGGACagattttgacgaaaaagaaATCAATTGGCATCCAAAAGCA
TTGAATTATAGATTGTTAAGgatagaaaatgaagaagataggctttttga
ttttcctggTTGTGGCTTTTGTTGTAATCCAATCGGGAGAATCAAAAACA
GCTAAACGTGCAAAGAATCCTACGGTACCGAAGGTTGGAAAGCCGATGAA
AGACCCACAAGTTTCAACGAATAAGCAAGGGAAGAAACTCACCAAAAAAC
TTCCGATAACAGATGCCAAAGCATCAGATTATGGGAAAGAGGAGATGAAA
GGAATGAAGGAAACAAACACATACCGTGGAAGAAGCAAATTTGAAACAGG
TCCTGCGCCAAAATTTCCTGAAGCACCGACCACTTCTGATGTAACTGCTC
ACGAAAGTGAAGTGAACGGATGTCGAGATCATCCTTTAGCACAATGCAGT
AAATGTTCCAGGGCTTGTTATGGACCAGAACATGAAACCTACttgttttc
attctgcagaaAATCATGCGGCTTCTGCAACGAAAAAACAAATACTTTCC
ACAACTTTTGGAGATTGCGTGCTAATTCATCCTTCTCACCGACCTGGATG
TTGAAAGAAGTGCGCATGTACCACGAGGGTGATGGAAATGTCAACTTAGC
CAAAAATTCATCACGCGCTTTTGCAAGCTCCGAATATTCAGGTTTCAAAG
CTTCATACGCCTTCGATAACAACAATGATACATACTGGTACCCAGACCCC
TATGGTCCAACACATACACCAGACAGTAGTGATTTCATTGGATTCGAATT
TCCAGTCGCTGTTCGTATCCACGGCGTTCACCTTTTGAACGATGCGAAAT
ATCCTTCGGCCGCCCCTGATAATATTTTGGTCGAAGCATCAGATGATAAA
TCGAATGGTTGGGATGTTAAATGGGCTATCCACAACTCAGAACACATCAC
TGATAAACGATTCGCAGTTCATGAATGTCCTGTCCTGTGGAAGAAATATT
ACGACGCCGACAACACAGCATGGTGTTTCCGCTTGTTTTCACAAGAAAAG
TCATTTGAAGAAGCCAACGATATTTGTGAAGAAGAAGGCGCTCAATTAGC
AAGTGTTGTTTCTGAAGAACAAAAGTCGTTCATCCTTAAAGATGTCAAGA
TCTGCTACAAAGCGTGGATTGGTTTACACAAAGAAGAGAAAGCATATTAT
TGGCTTGACGGATCAGACTCGTTGTACCACAATTGGAAAGAAGAACATTA
TACTGAAAGTCAACGAGATGATGACAAGTGTGTCCTTATGAATGAAGATG
GAAAATGGGAATTGGAAAAATGTCAAGATAAAAATTACTTCAtttgcaaa
caaaaaatgtACATTCGTCCAGAGGCGAAACCAGAAGAAGTACCAAACGT
GATGCCATACGAACCAGAAATTCCACCAATGATATTCTACTATCCTCACG
TCACTGAACCAGtCGCCAATACCAAACATTTACCACAAGGTGTTTTCCCT
GATAAGACGGGGAAATTCCCTGACGGCTCAGATGCAGAAGATGACGATGA
AGACACTGCAGTGTCAGCCATACTTTATAAACTCGCTCTCAAAAATCTCG
ATGAAATTAAAGGACAAAAAGCACAAACTGGCACTAAACCGGAAGGATGG
CAAGATCCAACCAACTTCACCATGAAAGTCGATGCCATCGCCAAGAAGCT
TGGCAACGAAATGAACAAAAACAATAGTGACATCAAACCATCTAATCCAT
TGGACGTCGTTGCTCTTCCACAATTGAAGGAAATCGAAACACCTAAATTG
GACATGAGCAAGGTTCCAGGTGTCCCAAAATGGTCACATGAAGATAGCAC
CAACAATGATAATGGAAAACAAACTGGGCTCACGTCACCAGTGATGCAAG
GCAAGCCAGTATCTAACCAACAACCTAAAGATGATGATGATTCAGATGAA
AATGATGATCAAAAAGACAAAGCTAATAAACAAACAACAGAGGacgatga
tgaagatgaagaggAAGATAAAAACGATCAAGATGAAGGAACCATTGTTC
CCAACAAACCTCCACAAAATAAAGACCAGAATCAAAAGAACGCACAATTA
GCTGGCCAACAAAATACTAATTATCAAAATCGGTTGGTGAAGAACCCATT
GAGCAGATTACACATTGGACGTTCAAAAGTTGCCAGTACCGCAGACGCCG
CTGAAAATGGCAGTGGATCTGGAGATGCTGAGACTAAAGAAATAAACGAT
ATTTTAGACTCAATGAACAAAGAATAAAAATGTACAAATTGAATGGGATC
TTTATCAAGAAGAAACAATtacaaagaacatttttcttggACGAAGAACG
ACATTTTGATGCTGTGATCGAAGTATTTAACGCATTGTAGTTTTTGTACA
AAGAAATAATTGTAAGCTAGGTACAAAGTACAAATGAGATTTTCTCAGAA
TGGATTTCTCGCCTTAATTTTTTACCGTAATTATTCTCTGAAAGGGAAAT
AATGATACCAACGGAATTGTGACTTACACGTGTCGAGGGGGATGGTGATC
TTCGCCCACGTATGAATTACCAGATTCGAAGGTAGTGTCTAAGTATCAGC
AACAGTTTTTTTTGttaggaaatttatttttctaaaatgcaCAATGATTG
CTAAATGTAGAACATagtttttttgtatttaaattttaagaaaatagaca
aaaatattattaatgaCATCGGTTAACTTACCCCTAGATATCAATAAAGG
TCTTCCTTACATATTTGTCGATGATAATTTCTAATGCTTTTTAAGAAAGG
CTTTTGTA
Run BLAST on NCBI

transcript from alignment at scaffold_142:52828..61725+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048269 ID=TCONS_00048269|Name=TCONS_00048269|organism=Clytia hemisphaerica|type=transcript|length=8898bp|location=Sequence derived from alignment at scaffold_142:52828..61725+ (Clytia hemisphaerica)
ACTCTTTTATGTTCGATTGTTataattaatattttctttttcacaccTCG
CAACATGGACagattttgacgaaaaagaaATCAATTGGCATCCAAAAGCA
TTGAATTATAGATTGTTAAGGTATGCAACATTTTTGGAATCAGAGGGTTT
TGTTCAGATAGTCTTTCAGACATTTCGCCAAATTAACTTAACGTTCTTAA
TGGGTTGtacagaaaatgagtaaattatAGAAAGAGATCAAAACAGATCC
CGGCTGATGgcttgaataaaaatttcatcgtgatttttattataatttcg
CATGTaatatcaaagttttttttgcaaaactaGCTTTCAACGAAAATTTC
TCGCTCGGCTTTTAAATTGCTGAAATCCGcaaaaaatttcataagaatac
gtataatataatttattttctttacaggatagaaaatgaagaagataggc
tttttgattttcctggTTGTGGCTTTTGTTGTAATCCAATCGGGTAAGAA
AACAACACATTTATATCGGTGACACCTCGCTTTCAATCTTGTTGATAATT
TCCAGCGCGATCAAGAGAAGATGAGAAGAAAAACCTAGAATATTTTAGCT
ACTTTATATTTGTGAAGACTATGTGTTGTATCCTGCGTTATGATACCTAG
TAAGCTTCGAGCTATAGGTAGTACTATGTAATTAAAATCTCGATTGGTAA
TAGCACGTCCGACATAGTATTCATCGTTGTATTCCCCAAGAAATTTCAGG
GATGTCTACGATTCCAAAGAGGTCTAATCTTCACTTACAACATAAATTGA
AAGTAGCATGCTCCGAAAAATTCCTAAGTTTTTAGACATCTAAGGAATAG
TTTCCAACGGAGGGCCATGTTTGAGTCAATTATAGAAGATTTTACTCGAT
CGAAAACACCTACAGTtatactcaatttttacaattcaAAATCTTCCAGG
AGAATCAAAAACAGCTAAACGTGCAAAGAATCCTACGGTACCGAAGGTTG
GAAAGCCGATGAAAGACCCACAAGTTTCAACGAATAAGCAAGGGAAGAAA
CTCACCAAAAAACTTCCGATAACAGATGCCAAAGCATCAGATTATGGGAA
AGAGGAGATGAAAGGAATGAAGGAAACAAACACATACCGTGGAAGAAGCA
AATTTGAAACAGGTCCTGCGCCAAAATTTCCTGAAGCACCGACCACTTCT
GATGTAACTGCTCACGAAAGTaagaatttttcttataaaatattgATCCA
AATGAACGGGTCATTTTATTacaaacattttgttttttgttggaaTTCTA
GGAAAGAGAAGACCACGTACGTAATGATTTCACTAAGATTTCAATTTCCT
TGATTCGAAATcggaaatgaaaaaatttacaaatagcaTAATCTAGAATC
CCACACTAGAATCTGGTTGGCCTGGCCAAATAAATTCTGAAAACTGTCTG
AACATTCAATATTCTCAACAGGTGAAGTGAACGGATGTCGAGATCATCCT
TTAGCACAATGCAGTAAATGTTCCAGGGCTTGTTATGGACCAGAACATGA
AACCTACttgttttcattctgcagaaAATCATGCGGCTTCTGCAACGAAA
AAACAAATAGTAAGTACTATACAGGCTGTTTGTTTCTAAGTCCATTCGTA
CTGCAGTTGGCTCTCCATATCTTGCACCTCCATAACTCAAATTTCGCCAT
AAATCGAACAGCTTTTTCCTCACTGTTATTCAAACTCCTCATTAGCCGTG
CAATTACTGACAATATAGTGTAGTTATCATAAGATACGACTGTTcacatt
ttctttcttcaagTAAGTATTAATCTCAAATTTTTCACCGTCTAACTACA
GCTTTCCACAACTTTTGGAGATTGCGTGCTAATTCATCCTTCTCACCGAC
CTGGATGTTGAAAGAAGTGCGCATGTACCACGAGGGTGATGGAAATGTCA
ACTTAGCCAAAAATTCATCACGCGCTTTTGCAAGCTCCGAATATTCAGGT
Gagatttgtactagtaataacatggtttagaggggctttagagggtgatt
tgggattaataccttaagggaagaaattttcgccgAAGacattttcgcgg
aatttaatttcgcgaattcgggcataattcgcgaaattaaattccgcgaa
acacaccaaaattgttaaatcgcgaaattgaattccgcgaaattcgattt
tttttcttcttcttttattttgttgtttttgaccaggtattaccaaaaaa
gatggacacaattgatttttaagcattataacNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttgattggcttaa
aaatttcgtacgatattttgttaaccaatcaaaatatcgtacgatacttt
tctttcaaccaatagaaatttttgtttacatcaggggctattacggattt
atcgccccgctcgtcctttacaaatctaagctaaatataatcaaccatat
aattaggGGAAAAACACCTTGGAGATTTTTCAACGTATGGTTTAAATCTT
AACTAGAAGACCAGTAAGAATTGAATCCAAATTCATATTTGAATTATAGT
AGATGAGATGTCATTTGCTCTCATCTTGAATGCATGCGTGAATGTGTCCA
ACATTAAACCCAAATTTATTCAACCCAAAATaatcaataatcaaaataaC
AGGCAATCTTTGATCTACTTCATTCCCAGGTTTCAAAGCTTCATACGCCT
TCGATAACAACAATGATACATACTGGTACCCAGACCCCTATGGTCCAACA
CATACACCAGACAGTAGTGATTTCATTGGATTCGAATTTCCAGTCGCTGT
TCGTATCCACGGCGTTCACCTTTTGAACGATGCGAAATATCCTTCGGCCG
CCCCTGATAATATTTTGGTCGAAGCATCAGATGATAAATCGAATGGTTGG
GATGTTAAATGGGCTATCCACAACTCAGAACACATCACTGATAAACGATT
CGCAGTTCATGGTAAGTGTGCACGGACGaagttgaaaaagttttatatag
ttttaaatttcaaaatggtttgCAGTAGCGAGAACTGTTAATACATATAT
GTCAATACATGAAAAATAATTGACCAGTAACACGCCATCAACAAACTGAT
CTCATCTTTTTAGAATGTCCTGTCCTGTGGAAGAAATATTACGACGCCGA
CAACACAGCATGGTGTTTCCGCTTGTTTTCACAAGAAAAGTCATTTGAAG
AAGCCAACGATATTTGTGAAGAAGAAGGCGCTCAATTAGCAAGTGTTGTT
TCTGAAGAACAAAAGTCGTTCATCCTTAAAGATGTCAAGATCTGCTAGTA
AGCAAAGATATTTGGTCTTGTTAAGCTTTGAGTTTTAATCTTCTTACTTA
TGATATGTCTATTTGANTTGCTAGTAAGCAAGGATATTTGGTATTGTTAA
GCTTTGAGTTTTAACCTTCTTATGATATGTCTATTTGATTCAAGTAATAA
GAGGCTTGCATGTATACCATCTATACTTAAAGTGTACGTGATGAAAGATA
CCTTTTCTATTTATTGGGTCTGACTTCAATGAGCACTTTGCAACATCAAT
CACAAAGAAGACAATACAAAAAGGGGTAATTCAACGAACCCTGACTCTTA
TACATAGCTCGTATATATGATGCTTTAGCGTTCACATACATCAGTTCGCC
GCACTGAAAAGTAGTGGAAGTGGCTCTGCTTTGCAAAATTTATAATCATA
ACTGATTTTTATATTGCACCATTTTTATCCCCTGTATTCCAGCAAAGCGT
GGATTGGTTTACACAAAGAAGAGAAAGCATATTATTGGCTTGACGGATCA
GACTCGTTGTACCACAATTGGAAAGAAGAACATTATACTGAAAGTCAACG
AGATGATGACAAGTGTGTCCTTATGAATGAAGATGGAAAATGGGAATTGG
AAAAATGTCAAGATAAAAATTACTTCAtttgcaaacaaaaaatgtgtAAG
TACCAGAAAATGACGGATTTCATACGAAAGAACCTACTTAAAAAACAACC
ATTATTTTTGGGTAAACCCATTGTGAAAGATGCAGATGAATTTGTCTAAA
AGTcatgaaatttctttttaatcatcTATCAAAACCAGTATCTAGGATAA
CATTCAGAGTTCTTAAACCAGCAACAATAAAGTAAGATGAATGCCTGTAG
CCACTTGCTTCTAGAGATGTTGTACAGGCTACTCTAACCATCGTAAATTT
CGAATGAGTCAGCCTAGTTTAAACCCCATTTCGGTCGCGAAAGATTATTC
TCAGTCTTATCGAGGATAacttttcaaatcatttttttccaacAGACATT
CGTCCAGAGGCGAAACCAGAAGAAGTACCAAACGTGATGCCATACGAACC
AGAAATTCCACCAATGATATTCTACTATCCTCACGTCACTGAACCAGGTG
AAGCTTACCTAACAAAATTATGCAACTTCCCCGTTCACGTTATTTATGAC
CAGTGTTGCCATGGTGACGTAATGTAAAGGGTAGCATATTCTGAATTAAT
AATATACCCACCACAAGGATTTCACGAAATTATGTAActtaactgttttt
tttttcacccaatacgtcacttgcaactaATCAGCTGCCCTAAAAGTATC
ACCCTTTATTTTAAtaggaattttattttctttcagtCGCCAATACCAAA
CATTTACCACAAGGTGTTTTCCCTGATAAGACNATTTTAGTCGCCAATAC
CAAACATTTACCACAAGGTGTTTTCCCTGATAAGACGGGGAAATTCCCTG
ACGGCTCAGATGCAGAAGATGACGATGAAGACACTGCAGTGTCAGCCATA
CTTTATAAACTCGCTCTCAAAAATCTCGATGAAATTAAAGGACAAAAAGC
ACAAACTGGCACTAAACCGGTGAGGCACAGTCTGTCACAAATCAATTTGC
TTTCTATGTGTTCTTCTTTTTGGTCCTCAGGACCTGGGATGGGATGACGA
TTCAAGTTTGTTAATTCATTGAGGAAAAAAAGCCGgtctgaaattaaaaa
taaatgcaCAATTTTAACAATTATTCTATTCACCTTTCGATCTTTCTTCT
GTACAGGAAGGATGGCAAGATCCAACCAACTTCACCATGAAAGTCGATGC
CATCGCCAAGAAGCTTGGCAACGAAATGAACAAAAACAATAGTGACATCA
AACCATCTAATCCATTGGACGTCGTTGCTCTTCCACAATTGAAGGAAATC
GAAACACCTAAATTGGACATGAGCAAGGTTCCAGGTGTCCCAAAATGGTC
ACATGAAGATAGCACCAACAATGATAATGGAAAACAAACTGGGGTAAGTT
GGTTTAAGAGCTCTTTATTGCTAATATTCTCAGTTATGGTTAGAGAAATG
GACCTTTAAGAGAAcaattttaagaacaataaggctcaaaacctcaaaaa
ctaacaacaatcaaagaaaaaggcTGAGTCTGTTATGATTAATGAGAAAC
AAAGTTTCATccaagaagaagaaacaaaacattttcaatgtaaaaaacAC
ATCGTTTCACATGAGAATtcaactaaaaatcaaaaaaggtcCATATCGGG
TTTTCAGCAACCTTTACCTATGCAAGCGAAATGGTTTTTCTTCAATGAAA
ATTAAATGACCAAGTATCCAACccggctggcacacaacgttgtttcaacg
ttcacctaacgttatatggacgttatgaacattagataaacgttgaaaca
acgatgtgtgccagctgggaaataAATAAACCCATGTAAATTTTTGCAGC
TCACGTCACCAGTGATGCAAGGCAAGCCAGTATCTAACCAACAACCTAAA
GATGATGATGATTCAGATGAAAATGATGATCAAAAAGACAAAGCTAATAA
ACAAACAACAGGTATAAATAGTATCTTTATACTCTCTGACATTCTCTTTG
AATTTCCTGTTGCAAATCTATTCCTAGTAAACTTTGTTGTAGGGATCTTT
AAGATTAGGGTGTGGCTTAAACATATAGCCCTCCAGGTAGACTGTCCATG
CTCTTTATCattgataaataaaataaagtaaattttgaaatgCGTAGGGA
TTTCACATCAGACTTAGAAACAAATACGTAGAAAATTCTCATTCGACGAA
TCCCTTAACATGATTCATTCCCAGGTCAAGCCACACAATCTACAGGCCAG
AAAATACAAGCACAAAATTTACCAGCAAGTATTGCAAACagtcaaaataa
tcaaaacaatcaaaagaacCCAAGCGCTAATCCACCAAACCCCGTGCAAC
CAACCAAAGATCAAGCTAACAAACAGCAGGATAAGAACCCACCCTCAGGA
TCGACCCAGGGACCCGTAGGTAACGTGAAGCCACCTCCTACAGAGGAGCA
AGGATCGAACCCAGATGCTTCTGTTGGAGAAGCCGGTGAAGAAGGCAAAG
AACAAAACGAAAAAGGTGAGCTTCTTACCTTTTGACTGTTTGCAATACTT
CCTGCCAGTGGCGTTGTGGTAGGGGGGAGGGCacgccccccccccagcgg
agctttttggaaggggcgccgaagagcgAGGGGCGCCAAATAAGATTgtt
ttaaacgccccaatcttaaaaatcatactttatgcgccttaaattgcgcc
ccaagaccaattttactgaaatAATTTTACATTACTTGCAATtgttttcg
ctcgcttcgctcgcaataaagtcaattggtaacttctttgcaatctagct
aatttatgcctgggcaaatgaattagtaaaagtttagaaactggtgggtT
GGGCActtctttggaaaattgggggcgCCATTTTCAACAAATTGACTTTG
GTCCCTCCAGAAAAACTTTCCCACGACGCCACTGCTTCCTGCTTGTAATG
TTGGTGTGCTCTGGGGCTTTGGAGAGgatgaacaaaaagaaaagtgtTTT
AATGTTCTTGATTTAATACAAAGTCACATGGCGTGGAAAATTTTTATACA
GAGACTAATATTAAAGTCATGCGATGTTCCCCGATAAAAAGGATTTAGGA
ATCTCTTACAAGACTTTTTCAACCACCTAAAAGACACATATGtgtctttc
aaactttttaaactCCTCCAGCTCTTGTTCTACTTTAGTTCACAAAAAGA
TAACTCGAAGATGGAGTGTCTTTAGATCCTTTGAACTtaccaatttttaa
ttttcacactcCTCCACCCCTGCTTTTCTTTACTCTACAGAGGacgatga
tgaagatgaagaggAAGATAAAAACGATCAAGATGAAGGAACCATTGTTC
CCAACAAACCTCCACAAAATAAAGACCAGAATCAAAAGAACGCACAATTA
GCTGGCCAACAAAATACTAATTGTAAGTTGTTCACATATACCTTTCAACA
CTGGGTTCTAGTAATGATCAGCATTGGTATAAGAAAGCCCTTGTCAATTT
TAATCCCCTCGGAATAGCATACTGAATTGcaatctctgaaaatttcgGCC
ATTCATCTCCAAGATCAACTCAACAATGCCTATGAAATGATAACTAATAA
ATAAATTCGAAAGGTTTATGCTTTAATCGGATGATTTTCGCGAGATATAA
TTTTGCTAGTCAAAAAGAAAAGTCAGGATTTGATTTCACGTTTGTAGTGG
TTCAACCCGAAAAAATACAGAATTTGGGATCCACGCAGATCGAATTTCGC
GAGTCTGGATTTTCAAgcgattttgcaaaaaaaattggcgAATCTTCGAA
ACGTCCATCCGATTAAAGTTTTGCATCCCGGTTAGAAATTATGATAGTAA
AAACTTCCTTAGTTATACGAATCGTAATATCTTACCAGAAGAAAACTGTT
CTTTCTTTATAGATCAAAATCGGTTGGTGAAGAACCCATTGAGCAGATTA
CACATTGGACGTTCAAAAGTTGCCAGTACCGCAGACGCCGCTGAAAATGG
CAGTGGATCTGGAGATGCTGAGACTAAAGAAATAAACGATATTTTAGACT
CAATGAACAAAGAATAAAAATGTACAAATTGAATGGGATCTTTATCAAGA
AGAAACAATtacaaagaacatttttcttggACGAAGAACGACATTTTGAT
GCTGTGATCGAAGTATTTAACGCATTGTAGTTTTTGTACAAAGAAATAAT
TGTAAGCTAGGTACAAAGTACAAATGAGATTTTCTCAGAATGGATTTCTC
GCCTTAATTTTTTACCGTAATTATTCTCTGAAAGGGAAATAATGATACCA
ACGGAATTGTGACTTACACGTGTCGAGGGGGATGGTGATCTTCGCCCACG
TATGAATTACCAGATTCGAAGGTAGTGTCTAAGTATCAGCAACAGTTTTT
TTTGttaggaaatttatttttctaaaatgcaCAATGATTGCTAAATGTAG
AACATagtttttttgtatttaaattttaagaaaatagacaaaaatattat
taatgaCATCGGTTAACTTACCCCTAGATATCAATAAAGGTCTTCCTTAC
ATATTTGTCGATGATAATTTCTAATGCTTTTTAAGAAAGGCTTTTGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030725XLOC_030725Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048269-exon-scaffold_142-1491911889:52828..52947TCONS_00048269-exon-scaffold_142-1491911889:52828..52947Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:52828..52947TCONS_00048269-exon-scaffold_142-1510915933:52828..52947Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:52828..52947TCONS_00048269-exon-scaffold_142-1575043694:52828..52947Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:53255..53320TCONS_00048269-exon-scaffold_142-1491911889:53255..53320Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:53255..53320TCONS_00048269-exon-scaffold_142-1510915933:53255..53320Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:53255..53320TCONS_00048269-exon-scaffold_142-1575043694:53255..53320Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:53777..54046TCONS_00048269-exon-scaffold_142-1491911889:53777..54046Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:53777..54046TCONS_00048269-exon-scaffold_142-1510915933:53777..54046Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:53777..54046TCONS_00048269-exon-scaffold_142-1575043694:53777..54046Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:54299..54436TCONS_00048269-exon-scaffold_142-1491911889:54299..54436Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:54299..54436TCONS_00048269-exon-scaffold_142-1510915933:54299..54436Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:54299..54436TCONS_00048269-exon-scaffold_142-1575043694:54299..54436Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:54679..54825TCONS_00048269-exon-scaffold_142-1491911889:54679..54825Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:54679..54825TCONS_00048269-exon-scaffold_142-1510915933:54679..54825Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:54679..54825TCONS_00048269-exon-scaffold_142-1575043694:54679..54825Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:55907..56188TCONS_00048269-exon-scaffold_142-1491911889:55907..56188Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:55907..56188TCONS_00048269-exon-scaffold_142-1510915933:55907..56188Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:55907..56188TCONS_00048269-exon-scaffold_142-1575043694:55907..56188Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:56341..56524TCONS_00048269-exon-scaffold_142-1491911889:56341..56524Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:56341..56524TCONS_00048269-exon-scaffold_142-1510915933:56341..56524Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:56341..56524TCONS_00048269-exon-scaffold_142-1575043694:56341..56524Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:56970..57172TCONS_00048269-exon-scaffold_142-1491911889:56970..57172Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:56970..57172TCONS_00048269-exon-scaffold_142-1510915933:56970..57172Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:56970..57172TCONS_00048269-exon-scaffold_142-1575043694:56970..57172Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:57523..57624TCONS_00048269-exon-scaffold_142-1491911889:57523..57624Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:57523..57624TCONS_00048269-exon-scaffold_142-1510915933:57523..57624Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:57523..57624TCONS_00048269-exon-scaffold_142-1575043694:57523..57624Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:57864..57890TCONS_00048269-exon-scaffold_142-1491911889:57864..57890Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:57864..57890TCONS_00048269-exon-scaffold_142-1510915933:57864..57890Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:57864..57890TCONS_00048269-exon-scaffold_142-1575043694:57864..57890Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:57945..58096TCONS_00048269-exon-scaffold_142-1491911889:57945..58096Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:57945..58096TCONS_00048269-exon-scaffold_142-1510915933:57945..58096Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:57945..58096TCONS_00048269-exon-scaffold_142-1575043694:57945..58096Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:58284..58520TCONS_00048269-exon-scaffold_142-1491911889:58284..58520Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:58284..58520TCONS_00048269-exon-scaffold_142-1510915933:58284..58520Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:58284..58520TCONS_00048269-exon-scaffold_142-1575043694:58284..58520Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:58977..59088TCONS_00048269-exon-scaffold_142-1491911889:58977..59088Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:58977..59088TCONS_00048269-exon-scaffold_142-1510915933:58977..59088Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:58977..59088TCONS_00048269-exon-scaffold_142-1575043694:58977..59088Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:60418..60549TCONS_00048269-exon-scaffold_142-1491911889:60418..60549Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:60418..60549TCONS_00048269-exon-scaffold_142-1510915933:60418..60549Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:60418..60549TCONS_00048269-exon-scaffold_142-1575043694:60418..60549Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1491911889:61040..61725TCONS_00048269-exon-scaffold_142-1491911889:61040..61725Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1510915933:61040..61725TCONS_00048269-exon-scaffold_142-1510915933:61040..61725Clytia hemisphaericaexon
TCONS_00048269-exon-scaffold_142-1575043694:61040..61725TCONS_00048269-exon-scaffold_142-1575043694:61040..61725Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:52828..61725 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0133929	0	0	0	2.62287	3.64537	24.2741	24.007	7.67599	7.70986	20.9693	15.8528	14.8853	14.3416	11.0493	28.0572	16.282	14.3552	0	0.178775	11.5938	11.8219	5.1722	6.84524	7.47064	11.6869	2.9845	0.794361	0.000168876	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048269 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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