TCONS_00048189 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00048189
Unique Name	TCONS_00048189
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1355

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_141:176961..202996-

transcript sequence

>TCONS_00048189 ID=TCONS_00048189|Name=TCONS_00048189|organism=Clytia hemisphaerica|type=transcript|length=1355bp
atccccccggctattacGTACCCGAGAATTATTAGTTATCtacgaaatga
tttttgaatttaGTAATTTTTATAAACTCTTCATACAtttactctaaaaa
gacgaCGAAAGTGCAATACGTCCAAAATATCCAAAGGTTAAGTCAATTTA
AGGTAAAGTAATTACCATCGATCATTCTGGTCTAAATGGAGGTCTTGAAT
TGAAAAGTTGATTAAATACGATAAATAATTCGATTGACTGACACGAGGCT
CCACCCATAAATACAATTTCTTGGAAATGGATAGTTTGTTTCAAATGTAG
TTTACACCATTTACTGAGTATAAGATCAATTCATTTCAAATCTTATTGCA
ACACTATCATACATAGTTATGTTCTTGAATAAGCCGTGCTCAAAGGCTGA
CCGATTACCCACACAGAAACATGTAAAAGCTGGTCTTTTAAATGAATCTT
TCCATTTACCTCCTGCATCTGTACTTCTTCTCACAGTTTGGGCAATTTCA
ACTCCATTAAAGATTAAAGTGAAAATCAATGATTTCCAAGGCATTGGCCA
TTCTAAAGTAACGTCATAAGGACTCACTCTGTTCTGAAAGTAAACTGATA
GACAAGggttttttttgtctttattggtCTGGCGAAACCCAGAGGAAATA
CATCCTTTATAACCATGCTTAGTAAAAAAATATGGTGAATCACCAGATCT
CCATTTCATAGCAGCGTCAAATTTCTCTTTGAATTTTTCGATAGTCCATG
TATAGTTACATAGTGATGGTGCGCAGATAGCCAAATTTAATTCCTCTTTT
ACAGCTCTACCCGATGCTTTAATAAGATCGTCTTTTTGATTCCgttcttt
gactttttcaacTTCNAAACCTCTACCCGATGCTTTAAAAAGGTCGTCTT
TTTGATGCTGTTCTTTGACTTTCTCAACTTCCTGCTTAGTCAGCATAAAT
TcttctttcaaatcaaaaagagaTTTATCGGTTGCCTTCAACTTCGTCAG
CATTTTTTTCTCCAACGACTTGATGGTGGTTTGGTTCATCTGAATTTTAA
TTTCCATTGCGTCGACCCCTTTCAATTTCTCTTCTGCAATTTTTAACCGC
TCCGCTAATGCTTGAATCATTTTGTCTTTTGCTTTCAAGTCTCCATCAAG
ATCCAACCGGACTTTTCCGATTTCGTTATCCCTCATTTTCAACTGTtcag
caaatttatttttcatttcttgagcTTCGAGATCTTTCGCTGTCAACTTT
TGAtcgaattctttttttattttgaaaatctcacTTTTCATTTCAAGAGA
CAAATGCATGTTGGCCGATTGTGCCATATGATTGTCCAGTTGTAATTTGG
TGCCC

Run BLAST on NCBI

transcript from alignment at scaffold_141:176961..202996-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00048189 ID=TCONS_00048189|Name=TCONS_00048189|organism=Clytia hemisphaerica|type=transcript|length=26036bp|location=Sequence derived from alignment at scaffold_141:176961..202996- (Clytia hemisphaerica)
ATCCCCCCGGCTATTACGTACCCGAGAATTATTAGTTATCTACGAAATGA
TTTTTGAATTTAGTAATTTTTATAAACTCTTCATACATTTACTCTAAAAA
GACGACGAAAGTGCAATACGTCCAAAATATCCAAAGGTTAAGTCAATTTA
AGGTAAAGTAATTACCATCGATCATTCTGGTCTAAATGGAGGTCTTGAAT
TGAAAAGTTGATTAAATACGATAAATAATTCGATTGACTGACACGAGGCT
CCACCCATAAATACAATTTCTTGGAAATGGATAGTTTGTTTCAAATGTAG
TTTACACCATTTACTGAGTATAAGATCAATTCATTTCAAATCTTATTGCA
ACACTATCATACATAGTTATGTTCTTGAATAAGCCGTGCTCAAAGGCTGA
CCGATTACCCACACAGAAACATGTAAAAGCTGGTCTTTTAAATGAATCTT
TCCATTTACCTCCTGCATCTGTACTTCTTCTCACAGTTTGGGCAATTTCA
ACTCCATTAAAGATTAAAGTGAAAATCAATGATTTCCAAGGCATTGGCCA
TTCTAAAGTAACGTCATAAGGACTCACTCTGTTCTGAAAGTAAACTGATA
GACAAGGGTTTTTTTTGTCTTTATTGGTCTGGCGAAACCCAGAGGAAATA
CATCCTTTATAACCATGCTTAGTAAAAAAACTTGGTGAATTATACTCTCT
CCATTCCGTAGCAGCGTCAAATTTCTCTTTGAAATTTTCGATAGTCCATG
TATAGTTACATAGTGATGGTGCGCAGATAGCCAAATTTAATTCCCCTTTT
ACAGCTAAACCTCTACCCGATGCTTTAAAAAGGTCGTCTTTTTGATGCTG
TTCTTTGACTTTTTCAACTTCCTGCTTAGTCAGCATAAATTCTTCTTTCA
AATCAAAAAGAGATTTATCGGTTGTCTTCAACTTCGTCAACAATTTTTTC
TCCAAGGACTTGATGGCGGTTTGGTTCATCTGAACTTTGATTTCTATTTC
GCCGACCCCTTTCAATTTCTCTTCTGCAATTTTTAACCGCTCCGCTAATC
CTTGAATCATTTTGTCTTTTGCTTTCAAGTCTCCATCAAGATCCAACCGG
ACTTTTCCGATTTCGTTGTCCCTCATTTTCAACTGTTCAGCAAATTCATT
TTTCATTTGTTGAGCTTCAAGACCTTTTGCTGTTAACTTTTGATCGAATT
CTTTTTTCATTTTGAAAATCTCACTTTTCATTTCAAGAGACAAATGCATG
TTGGCCGATTGTGCCATATGATTATCCAGTTGTAACTTTGTGCCCTGAAA
CCAAACAATTTAGAGACTCTTAGCTTTTCAAATAATATAACAGTTTTTTT
AACCTCTATACTTTACCGTACTTACTTTAAACAATCCAAACGTTCCTTAA
GCCTCAAACGCGCCAAGATGACAAAAATTCGGATAGTGCTGCGGTACAGC
TACTTTGAAAAAAGACAAAATAAAGCTAGCACTTCAGCTTCAACATAAGA
AAAATTTACCTTAAAGTAACATCCTGAGTCTTTGTATTCACAAGAGGAGA
CCATTGGACATACGGTATCCACATGATTTGTTATCTAAAGAAGAATCTGT
AAACTAAAATGATATGTCTTACAATTGCAGATGAATTATAACATGTTATA
AGATAGGATTTAATCCAAAAAAATCTCTTGAATTACAAAGTTATTTCCAC
TGTTGTCGTTTTGAAGTAAATGTTCGATTTGCGTAAGGGTTCACCTTTAC
AGATTTGTACTAAAATTCCCTCTTAGTAAGATATTTCGAGTTTTTCAACC
TCGGGTCTTTCGGGCATTTTAAAAATCCGAGTCAAGTAACTCGAAAAAAG
AATCATACAGTAAAAAACTCGATTTTTTATGGTACACCTCTAAAATACGA
AAAATTTAGGGGCGCCTTAAAAATAAAAGTTTGCTAACTAGAAAAATTAA
GGTTCATCATAATCAACCGAGTTAATTAACTCGAACGATAACGGTAACCA
CAAAAAATCGAATTATTATAAATCTTCTAAAATGACGTCATACCTCTCAA
GTTATGACGTCACAAATAGGTAACTAGGGTTTGCCAAACTCGGGCTTTTC
TAACTTGGGTTGTTCTAACAATTTTTATAATTTTTAATTTTTATAACTTG
GGTTTTGAGGGCCTCACAAAAAGTTATCCCGAAAGTTTTCATGGTTTGTA
TTCACATATCAAGGCCTGAAAAACCCAAGTTAAGAAAACCCGGTTTATGA
CGTCATAACCTTTTTTTTAGCTCAACTGAAGTTGAGAATCATAAGATGAG
ATTTCCACTGTCGTTTTTGAAGCAAATGTTTCATTTGCATAAGAGGTCAC
CTTTATAGATTCGTACTAAAACTCCCTCTTAGTAAGATATTTCGAGTTTT
TCAACATCAGCTCTTTCGGGCCTCTTGAAAATCCGAGTTAACAAACTCAA
AAAAACATACACCAAAAAGACTGGGTTAAAAGATTCCGGAAAACAAATTT
TCATAACTCATATTTTCGTAACAACCGAGTTAACTAACTCGAACGATTAA
GGTAACCACAAACAAATCGAGTTATTATCATAAATCAAGTTATCTTCTAA
AATGACGTCATTTCTCTCAAGTTATGAAAATAGGTAACTAGGGTTTGCCG
AACTCCGGTTTTCAGGGCCTCACAAAAAGTTATCCCGAGTGTTTTCATGG
TTTGTATTCACATATCGAGGTCTGAAAAACCCGGGTAAAGAAAACCAGAG
TTATGACCCGAGGTTTTTTAAAGTCCTTTAACTCGTGTTTTCCAGGCCTC
TCACATATCTTACAAAAGATAACAAATTGTTCTTACGTTTTTACGGAGGA
CGAATTCTCCACAATCCAATTCACAAGGAACGGTCACAAAACCGCAAGTT
TTCAGGTGAACCTAAAACAATGATTAAGGATTGTTATTATCTATCGCAAA
AGAAATCGACCCTAAATAGGAAAATTGGCCTAAAGCTTAAGTACGGAAGG
GGTTTACTACTAGGTATAGATCAACCTCCTCTACCCCTAGGCTCTTCCCC
TTTGAATCAAAATCATTATAAATACCATCAAGTAGATTCCTCCCCCCTCC
CTCCAAGGTGATATGGTTTCACTTCATAAATTGGCCCTAATGAGAGCATA
GCTTAAGTATCCAATTTAGTAAAAATTTGCGGAAAGTGAAGGGTCTTTAG
GATTTTAACACAGTGCCAGATCCCAGAATTAGAATTTGGAAAGAAAGATT
CAAAGTACTATCCCTCCACTTTTGAAAACTTCTTCTTTCTGCGTACAGAT
GATATCGAATGAAATAACGCCTACAAACCTCTTTCTCTCTGAGCTCATTT
TGCCACGTACATCCATCAACGAAATTCGGACATCGAATTTTCAAACTGAG
TATTTCTCTTTTTTTTCCCACATCTGGAAAAACTTGAATCTCTTGCCAAT
CTTTGGGGCATTTCCCCGGACTAGAATAAAATGATTAACATAAAAGATTC
TCCAATGCAATTAATTTGAGTAGTAGATTCTTTGCTTAACGAAAACTTTT
TATAGAACACAAGAAAATGACGACCAACAAAAATATAGAAAATTTCGACG
TGAACTTACTACTGTTCACACTTACTTCTGAAGATGAAATTCCCCAATAC
ATTTTTCACAAAATCGATGCCCACATTTCACGGCTTGTACTGGTTCTCGC
AAAACCAAAAGACATATTGCACAAGTGATATCGTCTCTATTGATTTCTTT
GGCGTTCTGTACAGAATCTTCTTCTGTTGTTTCAGATACTTCAGATTTTT
CGTCTTCCCAGATGAACGTCACATCAAAACCATACTCTTCTGGTTTACAA
GCTGCCATATTATTTAAAAATCTAATTTTCAGCGATCAAGATCGAACTTT
TCACAAATAATTAAAGGATCAGATTAAAAAGAAATTTCCGTTTCTCTTCC
CTCTCCGAAACTATAGCTTGCTACAGTAAGCTCATATCTCGATACTATCA
CTTTCAAAATACCTCTTGAACAAAAAAATCTATCAAAAAACAGAATATAG
ACAAATCAATGGCCTTGAAATTTAAAGACACAGCATTCCTTAGAAAAATG
AAACTACTTAGGTAAGAGTGATAGTTCCTTTATAATAACACTGTAGAACC
TTTCGCCCTAAAAACACACGTTTTTCTCAAGAATCACCCTATAATACGCT
ATCACTTAGATCAGCAATTTGAGCATAAAATCGAAAAATCAGGAAGGTTA
TTCATTTTTTGCGAATTGTTGATTCATTGTTCTTAGTAACAGTTTCAAGA
AATTATTCAAATTTTCATATAAGCATTAATGATTGCATTCCATATTCATT
CACTTTACTTAATTTATTCATAGAATTATTAATTAATTATCTACGAAATA
ATTTTAGAATTTATTAAATATTGTCTAATCTTCATCTGTCGTCCAGTCGT
CAGAAGATATGGACAGACTAGACGTTGTTTTGGTATTTGTTCGAGGTTAT
CGAACTAAATTTGAAAATTTTCCAACGCCCCCGTATTTCTAATCTTTATA
AACTCTTCATACATTTACTCTAAAAAGACGACGAAAACGTAATATATAAC
GACATTTACACCAATTAATGACTAGAAGATTAATTCATTTCAAATCTTAT
TGTAACACTATCATTCATAGTTATGTCCTTGAATAAGCCGTGCTCAAATG
CTGACGGATTTCCAAGCCGGTAAGCACATACATTACATGGTCTTTTAAAT
GAATCTTTCCATCTACCTCCTTCATCTGTACTTCTTCTCACAGTTTGAGC
AATTTCAACTCCATTAAATATCAAAGTGAAAATCAATGATTTCCAAGGCA
TTGGCCATTCTAGAGTATCGTCATGAGGTCCCACCTCATTATTAAAGAAA
ACTGACACATAAGTGTATATGTTGTCTTGATTGGTCTCGCGAAACATGGA
GGAAATACATCCTTTATAACCATGCTTAGCAAAAAAACTTGCTGAACTAT
ATGTCCTATATGTCCATTTCGTACCAGCGTCAATTTTCTTTTCGAAATTT
TCGATAGTCCATATATAGTTAAATAGTGATGGTGCGCAGATATCCAAATT
TAATTCATCTTTTTGATGCTGTTGTTTGACTTTTTCAACCTCCTGCTTAG
TCAGCATAAATTCTTCTTTCAAATCAAAAAGAGATCTATCGGTTGTCTTC
AACTTCGTCAGCAATTTTTTCTCCAACGATTTGATGGCAGTGCTGCCATT
GCCAACATTTTATTTATTTATGATTTTGGGTAATTAATTAGAAGATTAAG
TGCGTGAAATTTGAATAGTTTTACCGAAAATATTTTACCGTTAAAACCTC
AATTTTTTAGACAATAAGTTCTATGATGGTAGTNGAAAATATTACAAAAT
TTGGCTAAATCGCAAAAATATTTTACCGTTAAAACCTCAATTTTTTAGAC
AATAAGTTCTATGATGGTAGTTTGAACTTCTTTGTTCAAATAAAAAAAGG
AGAGCACTCGTCGCAGTCGTTATTAAGTTCTTATAAAGGGATTTGAACTT
CTTGCAACTCTTCATCTTTTCAATTTTTCTTTGGCGACTTGTAATTTCTC
CGCCAATACTTGAATCGTTNCCTTTTCAATTTTTCTTCGGCGACTTGTAA
TTTCTCCGCCAATACTTGAATCGTTTTGTCTTTAACTTGAATCGTTCTGT
TTTTAGCTTGAATCGTAATTTCATGTGCTTGAATTGTTCGGTTTTTAGCT
TGAATCGTAATTTCTTGTGCTTGAATCGTTATGTCTTTAGCTTGAATCGT
ATTTTCATATGCTTGAATCGTATCGTCTTGAGCTTGATTCGTTTTGTTTT
TAGATCGAATCTTATGTTCATGTGCTTGAATCGTATCGTCTTTAACTTGA
ATCGTTCTGTTTTTAGCTTCAATCCTAATTTCATGTGCTTGAATTGTTCT
GTTTTTAGCTTGAATCGTATCGTTTTTAGCTTGAATGGTATTTTCATGTG
CTTGAATGATTTTGTCATAAGCTTTAATAATTTGGTCTTTTGTTTTCAAG
ACCTGACCAAGTTCGGATTTCCCGATTTCGTTATCCCTTTCTTTCAACTG
TTCAACGAATTCATTTTTCATTTGTTGAATTTCGAGATCTTTCGCTGTCA
ACTTTTGATCGAATTCTTTTTTCATTTTGAAAATCTCACGTTTCATTTCA
AGAGACAAATGCATGTTGGCCGATTGTGCCATATGATTGTCCAGTTGTAA
TTTGGTGCCCTGAAACCAATCAATTTAAAGAATCTTAGCTTTTTAAATAA
TATAACAGTTTTTTAACCTCTATACTTTACCGNACAATTCAAAGAATTTT
AGCTTTTCAAATAATATATCGGCTTTTTTTACCTCCATACTTTACCGTAC
TTACTAAAAACAATCCAAACGTTCCCTTAACACTCAAACGCGCCAAAATG
ACAAAAATCCGGATAGTGCTGTGGTACAGCTACTTTAAAAAAGAAACTTT
TGCGGAACTCTTGTAAAATTTCCCACACTTAGCGAAAAACTCTGAACACC
TTATATGGTTTAAATTTCGCATGCGTCAATTTTTGGGATTTTTGTAGTCT
AGTATACTAAACGACTAATTGAGACAGACAGAAATTAATAAGAGGAATAA
ATTGCATACAAACTAATATTATCCCGGAACAACTATCATGTTATCATATT
TTCATATAACACTAGTATTACTGTAATAAACGGACTATGACTCCGGTCTA
CGATTTTCGCATAGTTTGACCCTCTTCGCAAAATTTATCTTCGATAATCT
TCGATTCGCAAAAAAAAGTTCACGCTGATTGTAATTTTTTTCATTCTTTG
GAAATTAAAATAGCAGCTTCAACATAAGAAAAATTTACCTTAAAGTAGCA
TCCAGAGTCGTTGTATTCACAAGGGGAGACCATTGGGCATACGGTATCCA
CGTGATTCGTTATCTAAATAAGAATCAGTAAACTAAAAAGATATGTAATC
AACTGTAGAATTATACGATGGACTTTTAGACATTTGTTTAGCATCGCTCA
CATCAATACACAGTCCATGGTATCCACGTTCGATGAATTTGTGCTCTTTG
TTAATAAATACAAATTCGATGCGGTAACACTCACCGAAACCTGGCTAAAA
GACAATCCTTTCTTGCTTGATTATGTTAAAATTGAAGGTTACAAACTTTA
CTATCATAACCGAGACAACAGGCGTGGTGGCGGTGTCGGCATATACATCA
AAGATGACATCAAGCTCAAAATACGCAAAGATATCACCAACATCAACCCA
GCCCTCGAACATCTATGGGTTGAAATTGAAGGAAAAAACAAACATTCTAA
ACTACTCCTCAATGTTGCGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNTTACACCAAAGCTCCTTATTGATATGTGAAAGCTA
CCAAAAATAGCAATGTCCTCCATCAGAACAACTTTAACATAAGGGACAAG
GACAGTCAAGAAGTCTACTTAGTTGAACAAAATACTTAGAGAAAATGGTA
CTATGGAAGCCCATTCTATACTCCTAAATGATAGTTGAAAGATCAGCAGT
TGAGAGGGTTGATTAAAATAGAAATCAAAGCACACAATAAAGTATACATA
TTTGTCCAGAAAGAACTGGCATGTTGTTTGGCATGTTTGCTTTGTTTTGG
TATTTAAAAATATGTACTTATCAGTCCTAAAAAAATACAAATTTGAATAT
AATGAGGGCAATGAGTCTGGTTAAATGTTACTAAATTTACAAGAAAGGAT
TACTGAAAAAATACTACTGTAGATGAACTAAACTCAAAAACTAAAATTTT
ACCATAAATTTACACTACGACAATTTAAAAATCTATCTTTAATAGCAGCA
AAGAAAAAATCATGGCTCAAAGTTTTAAAAACAGAGCTAGTCAGAGCTTC
AATTCAGTAGGTAAAGAGCTTTCAAAATTTGAAAACAGACACTGCATTGG
TTTACAAGACTAGAGAAAGATGTCAACCATCCACATGGTTTTTTCGAATC
ATGAAAAAAATAAAGTATTTATCAAAAAAAGGTTCTCTTTTCTTTTTTTT
GGTAATCAATTCCAACAAACAACAATCAATATAACATTTTTTTGGAAACC
ATCCCACAGTGTAAACATTATCAACCAACTAAACCCACACCGCCAAAATT
GTAAAAATAAGTCAATATAATTTCTATCAACAATTTCTCGTAAAATGTTT
TTTTCCAACATTCTGATACCAATCATGGCTGGAGGCATCATGTGTAGAGT
GACTGTGTGGCATTTCATTGCTTTAATGATCATGATACCAAACATCAACC
AAACAAAACTGACGCCAAGCCAAATCTGTCGATTAACAATTTCCATGAAT
AATGATGAAAATTATAATTGAAACTTATCTCGTAAAATGCTTTTTTCAAC
ATTCTGGAGGTGTTCAAAGTTAGAGGTATCATATGTAGAGCCAAGCAATA
CATGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNCCTCACTCACTTTCAAAATTTTTC
CTATTTCAAGCCAATATATTGTAGATTCTATGATCATGAGGTCTAGTGGT
TATATTATTAATATTTACCTTAAAATATTTACTTGATATTTTAGTCTGGT
GGTCTGATCAACACTGAAATTTTCGCAGGATTAGCTACTTCAATACTATT
ACAACTCAACCGAACTTTTCCTAATCAGCCACTACAACACCAACAAGTTA
TACTTTCTGTTTTCTTTTTCTGCAATTTTGCGAGCTCTGCCAGTATCCTT
GAGTTCTGTTTTGTGTTTTGTTTCTACAGTTTTACGGTTTCGCGAAATAA
TAAATTATCCCCGTTTTTACTATCCTTGAGTTGTTTTTTTTTGTGTGTTT
TGTTTCTACAGTTTTACGGTTTCGCGAAATAATAAATTATCCCCGTTTTT
ACTATCCTTGAGTTGTTTTTTTTTGTGTGTTTTGTTTCTACAGTTTTACG
GTTTCGCGAAATAATAAATTATCCCCGTTTTTACTATCCTTGAGTTGTTT
TTTTTTGTGTGTTTTGTTTCTACAGCATATTTTTTTTCATAGAATATAAT
TATCTTTTTATTTAAATATGATTATTTTTACATAGGACGAATAGCCATTG
TAAAATATGGAAGAGCCTGAAAGACAATTAATAAATAAAAAATAAAAAAA
ATAAATAATCCAAAAAATCTCATCCTTGAAATACTAAGTTATTTCCAACA
TTACTGAAGCAAATGTTCAATTTGCGTAAGGACTCGCCTTTACAGATTCG
CACTACATTCCTCCCCCCTCCCTCAGTTAGATATTTTGAGTTTTTCAGCC
ACGGGTCTTTCGGGCATCTTAAAAATCCGAGTCAAGTAACTCGAAAAAAA
AATCTTACACCAAAAAAAAACAAGTTAAAAGATTCCAAAATATAAATTTC
ATAACTCGATATACACCTCTAAAATACGAAAAATTTAGGGGCGCCTTAGA
AATAAAAGTTTGCTAACTAGAAAAATTAAGGTTCGTCATAATCAACAGAG
TTAATCAACTCGAACGATTAAGGTAACCACGAAAAAATCGAATTATCATT
AATTCATTATCTTCTAAAATGACGTCATATCTCTCAAGTTATGACGTCAC
AAATAGGTAATTAGGGTTTGCCGAACTCGGGTTTTTCTAACGGGCATTGA
GGGCCTTACAGAAAGTTATCCCGAAAATTTTCATGGTTTGTATTCATATA
TATCAAGGCCAAAAAAACCCGAGTTACGACGTCATAACTTTAAGGTTTTT
TAAGGTCCTTTAACTCGTGTTTTCCAGGCCTCTCACATATCTTACAAATG
ATAACAAATCGTTCTTACGTTTTTACGGAGGACGAATTCTCCACAATCTA
ATTCACAAGGAACGGTCACAAAACCGCAAGTTTTCAGGTGAACCTAAAAC
AATGATAAAGGATTGTTATTATTTATTGCAAAATAAAATCAACTCCTTAA
ATTAGAAAATTGGCCAAAAGCTTAAGTACGGAAGGGGGTTGCTACCTCAA
ATATAGATCAATCTCCTCTACCTCTAGGCTCTTCCCCTTTTTATAATCTT
ATTATAAATCAAAGTCATTATAAATATCATCAAGTAATTCCTCCCCCTTT
CCTCCAAGGTGATATGGTTTCACCATAGTATAAGAAAGCCGCGGCTGGAA
TGAGTACAGCTGAATTTCTGTTGTTCTATCTATGTCGTAAGAACAAATTT
TTTTATGGTTCGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAAACC
ACAGAGACACAGATAGAACATCTATTTACAACAAAAACAATAGCGTCATC
ATTCCAGCCGCGGCTTTCTTATACTATGGTTTCACTACATAAATTGTTCC
TAATGAGAGCATAACTTAAACTATCCATTTTGGTAAAAATTTGCGTAAAG
TAGAGGGTCTGTAGGAATTAACACAATGTCAGATCACAAAACTAGAAATT
TAGAAAGAAAGATTCAAAGTACTTTACTGTCGTTTTTGACCATTTTTCTA
GAACAGCCATTTTTGAAAACTTCTTTTCGCTGCGTACAGATGATATCAAA
TGAAATAATGCCTACAAACCTCTTCCTCTCTGAGCTCATTTTGCCACGTA
CATCCATCAACAAAATTCGCACATCGAATCTTCAAACTGAGTATTTCTCT
TTTTTTTCCTACATCAGGAAAAACTTGAATCTCTTGCCAATCTTTGGGGC
ATTTTCCCGGACTAGAATAAAATGTTTAACATAAAAAATTCTCCAATGCA
ATTAAAAATTTGAGCTGTAGATTCCTTGCTTAACGAAAACTTTTTATAGA
ACACAAGAAAATGACGACCAACAAAAATATAGAAAATTTCGACGTGACTA
CTGTTCACACTTACTTCTGAAGATGAAATTCCCCAATACATTTTTCACAA
AATCGATGCCCGCATTTCACGGCTTGTACTGGTTCTCGCAAAACCAAAAG
ACATATTGCACAAGTGATGTCATCTCTGTTGATTTCTTTGGCGTTCTGTA
CAGAATTTTCTTCTGTTGCTTGAGATACTTCAGATTTTTCGTCTTCCCAG
ATGAATGTCACATCAAAACCATACTCTTCTGGTTTACAAGCTGCCATATT
GTTTAAAAATCTAACTTTAAGCTACCAATTTACTTTTAGAACTAAAAACA
CTGATGATGATTATTAAATTGAAACATGTATGAAAAATAAAAATTAACAT
GCTTGGTCAAGTTTACCGACTATGCCTTCACTACTCATTTAAGCTACCAA
TATACTACCGAACTTTTACAAGTTACAGTAGGATTAACTAACTTTATAGA
TAGACTCTAATGAAAAATTTCATTATAGCTTTACTATTAGTCATTCCATA
CTATCGCTTTCAATTATCTCTCGAACAAAAAATATCACCAAAAGTTAACT
TAGAGATCTATCAATAAAAATAAATCGTTTTAATAATTATTAAGATAGCA
TTCCTAGGAGAAGTAAAACTGATGAGGCTCTTTTTAAATTAGCACTAAAC
AGAGCATTGTGAAATTTAATCTTTCCTATTGCCACTAGTAAACTGCATTA
TATGTTGCCATGACGGAAGCGCTATACGAATAAAGTCAACTCTCATTATA
ATGTTGACATTACGAGATCTAAATTGATGGGTCGCATTGTGTACTTTTTG
AAAGAAGAAAGTATATTGTCAAATATGCAATTTCACGGTCGAAAGGAAAC
ATTGGTAATCAGGACCAATGCACTCTGATTTTTATATAAGAATACACTTT
ATAAGAATGACGAAAATGGCCAAAAATTTAAGAATAATGCTAAGAATATC
ACCATCATGGAATAATCTTTCCATAGAATAATCTTTCCATAGAATAATCT
TTCTTAACAAATACGTCTCAGATTGGAATTTCAAGAATTTGATAGATCTC
ATCAAACAGCCTCCTGATTATAACCGATATCAATTTTACCAAGCTCTCCC
ACTAGATGATCATTTAATGAGACTTGCTTGCATGGAATAACCAGGATCGA
AATTTCACTCATTTCTATAAACGAAGCTTTTCTCCCAATGGCTTTAAGGA
TTACTAACAAAGCGAATATAAGACAAAAGGAATTGAAAAAGGAACCTTTA
AAGATTATTTTCCATGTCAGTTTACGAACTAATGGTATCTATCCAAGATA
TATTGAAGCCATTGAAAACTTGCAAGAAACTCATGAAAAATATGTTGAAA
TGTATGAAAGTTCCTCTTTATCATCTCTTATCGAACACTGTAATGAAGGG
AGAAGCACAGTTTGTGTGAAATTCGAACGAAGAGGATATTCTTACTGGTT
ATTCTTACCACCAGATGCGATTTTTGTTCATGAAAATTTTCACCGAAGAG
CTTTAATGATTAATGATAATCCTGATTTTTTGTTCGAATTCATCAACGAG
GATATTTGCAGATTACACGGAACTAAAAACTAGGCAGAACAAAGGCTCAG
TGGAGCAAGATTTGGTCATTTAATGGTCATTTAGAACCACTGCATATAGG
ATGAGTAAACACTTATTTCAAAAATATATCACTTTATTATAATAGATTTG
ACCGAATTTTCAACTAGTTCATTTTTTCATCATTTCAATTCAATTTTTTG
CCCTGTAAAGTCCCGGGGGGGGGGATATCGTCAAAATCTCGTTAAATCGT
TCCAAATAATTTCAAAGGTATTAGGCCTTACTCTTGAAGAGTTTTATTCT
CGGAACAGAAGAAGGTGTGAGGTAGCTTAGCAGGCCAATCTCGCACTTAT
TTCTACCATATGTGTAGATATATAAACATCCGTAAATCTATCATATTGGT
AGTTACGGTAAATACTATATCTACAATTACAGTATGAATAATATTGTAAA
TTGTGATAGATTCAATCTTTCATCTAAAATGTGACGCTCTGAAATTTTAA
GGCAACACTTTCGATCGGCTGGAAAGGCTTTAAGATTTCTAGCTTTCAGT
TTTATTTCATTGATGATCGTAACTAGGCTAGACAATAAGGAAGTGAAAAG
CTTGTTGGTGCCAAAGGAATAAAGACTAGAAACAAGCAAATAAACACTAA
TAGAAATAGCTTACAATTCCTGTTCCCCGTATTTCATAAAACCGTAATTA
CAAACACGGGTCTTTGATAAGAGTCGGAAATAGGTCCGGAATTCTTAAGT
GTTTATAAACGGAACATGGAAACATTATTCGTCTGCTATTGACAGTTATA
ACAGACTTTGCTGTTTTTATCATAAGAACAAGCTGTAATAAGACACCCCT
TCTCACAGACCCACTGGGAACCCTACGCACTGGAAAATTGATCAAATTAT
CGTCCCCGGTGGAAAATTATCTTGTAATTTCTGTCCCCACTGGAAAAATT
GTCAGTTTACGTACTAATGGTATCTATCCAAGATATATTGAAACTGACAC
TGAAAATAATCAAATAAACCGATCCTCACTGCTAAATATTATGCTATTTT
CCCCATCCCCATTGAATTTCTAACTCGAAAACAAAAGAATAGAAATCCCC
AGCCATTAAAGCTATGGAAATATCAATCCTCGTCGAGTTTGAGTCCGTTA
TTTTCAACCCCTGGTTGAAAAAATCCTATCGGGTCTGTGAGAAAGGGGTG
TAATAAGCACGAACGTCTCCCTTCAAAAAAGCACTAAGGGTTTCTTATAA
CCAAGAAAAACAAGATGTTACATTTGTAAGAGGTTGTCTATAGAAACAAG
AGAGACACTTAAAGTCTGGTCAAGTACGTACAAAGTATTAGAAATTTTAA
TCCCTGCCTTCTTTCGGTAGACGTAAATTTTCTCTAAGAACAATTTTAGA
AGCGCATATGAAGCTCGATTTAGGTCATAACTTGTGAAACATAAAAGAAG
GAAAACCAAATGGCAAAGATATTAAAAGCATTTTGTAATCAAACAACTTT
TGAACATTTCAGCCTTAGAAAATATGTCACATTCTTAGAGTTTAAGGAGA
CTCTTCTGGTTCTTAATATGTAAAGCGTATTCTACAAGTGTGAGCTTATA
ATACCATTCGCATGCTAATAAAGGTTTTAACACTTTGGGGGAGGGATGAT
TTTTCTGCAAATATGGCATTAGAGTCTCCGAAAAAGTGCTGCACCATCGT
AGAGAGTTTTATTAGGGTTTGACGACAAATTAAGTGTTGAATAAAAATAA
AACTAGTTTGTTTTTTTTAGACTCCTCTCAACTCATTAAAAATCACAGTC
AGTCGAAATATTTTCGTAATCTCGTTTGTTTTTGGGTTAAACTTTTTATC
GATGATGATAGATTCAACATTGCAGTCAGAACATTTTTCTGGATGACGGA
CATGATGGGCTCTGATGAGTGAAAAATGAAGTTCGCCGATAAAATTAGAA
AGATTAAGGTTTGACAGACAGAAATATCATAAGAAAAAGTATTTCGTTGA
GTTCGAAAGGCTTGCTTTGGACGAGGGTTTCTCAACCTTTTCGAGGGTCG
GTTTTCGGAGGTCGAGTCCGCACATAGACGATGTTAGCGTCCATTACAGT
TACGTTACGCGCAGAGTTTGTAGCCGTTATGCCGTTATATTATACTGTTT
TTTTTGAAAAAAAATCAGTGGTAGAGTTTCGAAGAAAATATCAAACTCTA
TCGACTGTAAACTCTTTTAGGAAAAAAAACTCGTTTGCGAATTTTCTATG
GACTTTTTCGTTGGATGTTGATTAGTCTACTCCGCACATAGCCGACATTA
TCCAACCCTTTGGGACAAGCGTGCAAAATTTAATCCTGCATAACACAAAT
GTAGACTTATTTGCTTTAAGCAATTATTACCCGTGTGTAGAAACGAGAGC
TTGGCTAATAAATTTCACCTTTAGAATCATTGACCTTCATTGACTTTTTT
TCAAGTGGAAAAAAACATTAAGTGAGAACCACAGAGAAANNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTAAAATACTGTTTACATTGAACATAGATAATAATCAAGGG
ATGATCTCCTGAAAGTGTAGTCAACACATTGGTTGCATCGTATTACTAAG
CGATGAGTTACCAAGCTCATATATGAAGAGTTTAAGATTATAATCAACAA
AAGAAGAAAGGCTCCACACCTTTTTTGGTCCAGTGATTTGTAATAGAAGG
CCAAAAAAAAGCAGGATGAGGTCACAAAGAGACTTATAGTTATAGATGTA
GAATTTAAGATTAGAATCAACGAAAGAAGAAAGGTTTTTTTACGCCTTTT
GTGTCCCACAATTTGATATAAAAGCCAACATAGTGGTATGAGTTCGAAAT
ACTGATGATAAGAGCACTTTTCATTCTGTTTATTCTGTTTATTTCAGCCG
TCCGTTGTTATGACAACAAGAAGGAGAGTGAGTTGGGATTGTGTAAACAA
TGGAAAGAACACGGGGCATGTACCAAACACACCAATTTAATGAAACGGTT
CTGTAGAGCAACGTGCGACATGTGTGGTAAGCCTTATTCGGGAAATAGTC
CGTACCCCTATGTTGAGGAGGTGTGGCGTACAGGGTAATATGGAAAGTAA
AAATTCCAGGGGGTCAGGTTTTTCGCTTTTTCGTGTAAAAATTTACGATG
GTCAATAAATTGAGGTTGAAAATTCAGGTTGTTTAGTAACATGAGGTTGA
AAATCCAGGGTGGTCAATAAAAGGAGGCAAAAAATTCATGGTGGTCCAAG
AATGAGAAAAAAATTATGGGGCTCCTAAAAATTGAAAAATAAGTCAATGG
GGTTCTCCTCAATAGGGGTACAATTATTTTCTGGAATAGCCTAATTTTTC
TGATATCGTCTAAACAAAAACTACTAGATTTCAAGCAAAAGAAATTTGCC
GAATCATCAAATTTTTGAAACTTACTATATTTGTCTTTTGTCTTTTTTCT
ATTCATTAGACGTGAAAGCCTTGCCAGCTGCTTGCATGGAATCCAAGTTC
GGGTGTTGTCCTGGTAACAAAATACAAGCTTTAGGTCCTCGAAATAAAGG
CTGTTTTAATGGTAAGTCAGCAATATCAATTTCGATCCTATTAATTTCTC
ATAATGCTTCTTGTTCTTTTTGTGAAATCANAATCCGTTTCGATCCCATT
AATTTCCCATGATGCTTTTTGTTCTTTTTGTATCATTGGCACAAAAATAA
AAACTTCTTAGAAAAGCAAATTATACCAAACTCTTGCGTTATCTGATATT
CAGATGGCGGATTGGCGGCCACCCACGTTAAAGCGCTGAAGGAGCGGGCC
AATTTCCCATCAGAGAGGAATGATAGTCAGCCTTTGATGTGCTGCACCCC
TAGTCGGGTTCAACTACCCTTACGCGTAAAAATAAATCGGTCGGACCCGC
CAATCCCCGAAAACGAGGGCTGGGTTATTAGGCCTCCCGCCCAGATTTAT
AAAGCCCGAAGGGCTAGATGTCATGCTTTAAGTCATCGCAGGCAAAAAAA
AGTGAATATCGCAAGAAATATTGTTTCTGTTGTTTCCAGAAATCCTCTAA
GCTTCTGATTGGTCAAGCACTGAAATTCTATTCTAATGTCACGTGACCTA
GGTAGAATTTCCTTCCTAACCACGGCACACTTCTCAGCCAAAGCACGACA
TCTAGCCCCTCGGGCTTTCTAATCTGTTCCTCCCTCTTCAAAATCCTTGA
CGCGGTCTTTTAAAATTTTGTAATCTAAACCTTCCAGATGTTGAAAATTT
TCCCGACCTTCAGACCTTAACGTGTCGGAAGGAAATCTCAGCACCTGAGT
GCCAGATACTTTAATGGGATAAATTTTCGCGGGGATTAATTTTCGCGGAT
TTCGCGGATTTGGGTGTCATCCGCGAAAATAAGTCCCATTGGAAATTTGA
AAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNCTGGTAACAGACGGACGAACGAACGGACGGACGGA
CGAACAGACATGGGTTAATTTATAGGACCTCCACCGGGGCACCCGGAGGT
AGGTCCAAAAAATACCAATTTTTACGTCTACACTTGTTTCGGAACCGTTT
CGTTTCTGAACATGGTCTTAGGTTCCAAATAACCACCCCTGATTGTTAAT
TTTCGAAAATTATTTGGAACCAAAGAGTATTTGTAATCTTTATAAACTCT
TCACTTACTCTAAAAAGAAGACGAAAACATACGTCCAAAATATCCAAAGG
CGAAGTCAATCTAAGAGTAAGGTTAAGTAATTACTGTAATTACCATCGAT
CATTTAGGTTTAAATGGAGGTCTTAAATTAAAAAGTTGATTAAATACGAT
AAATAATTCGATCGACTAATCCAAGGCTCCACCCATAAATACAATTTCTT
CGAAATGGATAATCTGTTTCAAATGTAGCTTACACCATTCACTGAGTATA
AGATCAATTCATTTCAAATCTTATTGCAACCCTATCATTCATAGTTATGT
TCTTGAATAAGCCGTGCTCAAATGCTGACCGATTGCCCACAAATGAAGAT
ATATCCCTAAATGGTCTTTTAAATGAATCTTTCCATCTACCTCCTTCATC
TGTACTTCTTGTCACAGTTTGAGCAATTTCAACTCCATTAAATATTAAAT
TGAAAATCATCGATTTCCAAGGCATTGGCCATTCCAAAGTATCGTCACGA
GGTCCCACCACATTATTAAAGAAAACTGACACATAAGTGTTTTCGTTGTC
TTTATTGGTCTCGCGAAACCCAGAGAAAATACATCCTTTATAACCATGCT
TAGTAAAAAAATATGGTGAATCACCAGATCTCCATTTCATAGCAGCGTCA
AATTTCTCTTTGAATTTTTCGATAGTCCATGTATAGTTACATAGTGATGG
TGCGCAGATAGCCAAATTTAATTCCTCTTTTACAGCTCTACCCGATGCTT
TAATAAGATCGTCTTTTTGATTCCGTTCTTTGACTTTTTCAACTTCNAAA
CCTCTACCCGATGCTTTAAAAAGGTCGTCTTTTTGATGCTGTTCTTTGAC
TTTCTCAACTTCCTGCTTAGTCAGCATAAATTCTTCTTTCAAATCAAAAA
GAGATTTATCGGTTGCCTTCAACTTCGTCAGCATTTTTTTCTCCAACGAC
TTGATGGTGGTTTGGTTCATCTGAATTTTAATTTCCATTGCGTCGACCCC
TTTCAATTTCTCTTCTGCAATTTTTAACCGCTCCGCTAATGCTTGAATCA
TTTTGTCTTTTGCTTTCAAGTCTCCATCAAGATCCAACCGGACTTTTCCG
ATTTCGTTATCCCTCATTTTCAACTGTTCAGCAAATTTATTTTTCATTTC
TTGAGCTTCGAGATCTTTCGCTGTCAACTTTTGATCGAATTCTTTTTTTA
TTTTGAAAATCTCACTTTTCATTTCAAGAGACAAATGCATGTTGGCCGAT
TGTGCCATATGATTGTCCAGTTGTAATTTGGTGCCC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_030671	XLOC_030671	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00048189-exon-scaffold_141-1575043694:202346..202996	TCONS_00048189-exon-scaffold_141-1575043694:202346..202996	Clytia hemisphaerica	exon
TCONS_00048189-exon-scaffold_141-1575043694:176961..177664	TCONS_00048189-exon-scaffold_141-1575043694:176961..177664	Clytia hemisphaerica	exon
TCONS_00048189-exon-scaffold_141-1510915933:202346..202996	TCONS_00048189-exon-scaffold_141-1510915933:202346..202996	Clytia hemisphaerica	exon
TCONS_00048189-exon-scaffold_141-1510915933:176961..177664	TCONS_00048189-exon-scaffold_141-1510915933:176961..177664	Clytia hemisphaerica	exon
TCONS_00048189-exon-scaffold_141-1491911889:202346..202996	TCONS_00048189-exon-scaffold_141-1491911889:202346..202996	Clytia hemisphaerica	exon
TCONS_00048189-exon-scaffold_141-1491911889:176961..177664	TCONS_00048189-exon-scaffold_141-1491911889:176961..177664	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_141	supercontig	scaffold_141:176961..202996 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.300588	0.201758	0.24795	0.608231	0	0.472044	0.645105	0.677521	0	0	0	0	0	0	0	0.155202	0.101245	0.184322	1.25167	1.38706	0.232171	0	0	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR008974	TRAF-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00048189 vs. Swiss-Prot (Human)

BLAST of TCONS_00048189 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00048189 (transcript) - C. hemisphaerica