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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048188 ID=TCONS_00048188|Name=TCONS_00048188|organism=Clytia hemisphaerica|type=transcript|length=520bp
AGCATCTTTCATGTTGACCCCACACCCCAAGCTACTTGTTGCAACAATAA
CTTTTAACGAGACCACTTCTGTTAAAGATTCCAagacaatatttttcttt
ttcttcctgGTTTCTGCGTGGAATATGCCAATAAAGTCTTTTGGATTAAG
GTCAGGTCTTGGTTTTTTAAAAAATCTTCTCAGTTGTTGATATACTATAC
CAGCTGTATCAACAGATTTACAGAAGATAACAAATTTGGGTGATTCGTGA
ACATCTTTAGCTAAAATTGATAGAATCCAATGAAGGCATTCAACATTCTC
TTGTTTCGGAACTTTAATAACTtcaaggaaaatgtttggaCGGTCACTGC
ATGTCGATATAATTTTCAACGACTTTGACAAATTGCAGCTTTCAATAACC
AACTGAGTCAAGTCCAAATCGATTGTAGCACTCAGAGCAAGAACAGGGAC
ATTTTGTCTGCAAGTTGAACGTAATTCACCGATCCGACTGAAAGTCTCTC
GAAAGGCCTTTGAACCTTTT Run BLAST on NCBI transcript from alignment at scaffold_141:152742..154132- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048188 ID=TCONS_00048188|Name=TCONS_00048188|organism=Clytia hemisphaerica|type=transcript|length=1391bp|location=Sequence derived from alignment at scaffold_141:152742..154132- (Clytia hemisphaerica)
AGCATCTTTCATGTTGACCCCACACCCCAAGCTACTTGTTGCAACAATAA
CTTTTAACGAGACCACTTCTGTTAAAGATTCCAAGACAATATTTTTCTTT
TTCTTCCTGGTTTCTGCGTGGAATATGCCAATAAAGTCTTTTGGATTAAG
GTCAGGTCTTGCTTTTTTTTTAAATCTTCTNTAGATGTTTCTTTATCATT
TTCTTCAGCATAACAATCATTGTTCAAGTCAAGGAAAACAGTTTCCTCAT
CATCTTCATCAATAAAAGCTTCCTTTACAATAATTGCAATTTCTTTGGCA
CAACGTTGATTCAAAACTTTTAATTCACCAATGATACACCAATGATAAAA
AAAACTGAGTTAATGTAAGGTAGATTTTGCACCACACTTTCAATCACAGT
CTCACTTAAACCAGTGACCAGTTCAGGAGGAGTGAGTAGAGGAAGTAGTG
AACTCTGTTGCTCATGCGATTCAACTAACATTTCACGGACCAAATTTTTA
CTTTCATCTGAGACATTTCTGATAACCTTTTTCTCACTGCAAATTTCCAT
TTCTTCAACTTTTGGTAACAAGGTATAGTCACAACCACCATCACAGTCAC
AACTTAAAGCACAAAACGAACAACGAGAATGGCCAGGGTTCAATGGTTCC
CCTTTTTCGCAGTTTTCATTGAAGGGTGTATATAGGGTTGATCTGAGGCA
CTTGTTTTTTGCTTCAGTGACAAATTTCTTCATTGACCGGCTGACATGGG
CGTGGTGGGGAAAACTGTATAAAATAGCATGGCACTTACTGCTACCATCT
CTACCTGCTCGACCAACCTGTTGGCAGTAATCAACCAAATGGAATGCAGG
ACCATAATGAATAATGTACCGAACATCTTTCATGTTGACCCCACACCCCA
AGCTACTTGTTGCAACAATAACTTTTAACGAGACCACTTCTGTTAAAGAT
TCCAAGACGATATTTTTCTTTTTCTTCCTGGTTTCTGCGTGGAATATGCC
AATAAGGTCTTTTGGATTAAGGTCAGGTCTTGGTTTTTTAAAAAATCTTC
TCAGTTGTTGATATACTATACCAGCTGTATCAACAGATTTACAGAAGATA
ACAAATTTGGGTGATTCGTGAACATCTTTAGCTAAAATTGATAGAATCCA
ATGAAGGCATTCAACATTCTCTTGTTTCGGAACTTTAATAACTTCAAGGA
AAATGTTTGGACGGTCACTGCATGTCGATATAATTTTCAACGACTTTGAC
AAATTGCAGCTTTCAATAACCAACTGAGTCAAGTCCAAATCGATTGTAGC
ACTCAGAGCAAGAACAGGGACATTTTGTCTGCAAGTTGAACGTAATTCAC
CGATCCGACTGAAAGTCTCTCGAAAGGCCTTTGAACCTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048188-exon-scaffold_141-1575043694:153978..154132 | TCONS_00048188-exon-scaffold_141-1575043694:153978..154132 | Clytia hemisphaerica | exon |
| TCONS_00048188-exon-scaffold_141-1575043694:152742..153106 | TCONS_00048188-exon-scaffold_141-1575043694:152742..153106 | Clytia hemisphaerica | exon |
| TCONS_00048188-exon-scaffold_141-1510915933:153978..154132 | TCONS_00048188-exon-scaffold_141-1510915933:153978..154132 | Clytia hemisphaerica | exon |
| TCONS_00048188-exon-scaffold_141-1510915933:152742..153106 | TCONS_00048188-exon-scaffold_141-1510915933:152742..153106 | Clytia hemisphaerica | exon |
| TCONS_00048188-exon-scaffold_141-1491911889:153978..154132 | TCONS_00048188-exon-scaffold_141-1491911889:153978..154132 | Clytia hemisphaerica | exon |
| TCONS_00048188-exon-scaffold_141-1491911889:152742..153106 | TCONS_00048188-exon-scaffold_141-1491911889:152742..153106 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_141 | supercontig | scaffold_141:152742..154132 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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