TCONS_00048155 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048155
Unique NameTCONS_00048155
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length419

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048155 ID=TCONS_00048155|Name=TCONS_00048155|organism=Clytia hemisphaerica|type=transcript|length=419bp
TTTTAGTTCTAAAAGTAAATTGGTAGCTTAAAGTTAGATTTTTAAACAAT
ATGGCAGCTTGTAAACCAGAAGAGTATGGTTTTGATGTGACATTCATCTG
GGAAGACGAAAAATCTGAAGTATCTCAAGCAACAGAAGAAAATTCTGTAC
AGAACGCCAAAGAAATCAACAGAGATGACATCACTTGTGCAATATGTCTT
TTGGTTTTGCGAGAACCAGTACAAGCCGTGAAATGCGGGCATcgattttg
tgaaaaatgtaTTGGGGAATTTCATCTTCAGAATCCGGGGAAATGCCCCA
AAGATTGGCAAGAGATTCAAGTTTTTCCAGATgtgggaaaaaaaagagaa
atactCAGTTTGAAAATTCGATGTCCGAATTTCGTTGATGGATGTACGTG
GCAAAATGAGCTCAGAGAG
Run BLAST on NCBI

transcript from alignment at scaffold_141:188200..199662+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048155 ID=TCONS_00048155|Name=TCONS_00048155|organism=Clytia hemisphaerica|type=transcript|length=11463bp|location=Sequence derived from alignment at scaffold_141:188200..199662+ (Clytia hemisphaerica)
TTTTAGTTCTAAAAGTAAATTGGTAGCTTAAAGTTAGATTTTTAAACAAT
ATGGCAGCTTGTAAACCAGAAGAGTATGGTTTTGATGTGACATTCATCTG
GGAAGACGAAAAATCTGAAGTATCTCAAGCAACAGAAGAAAATTCTGTAC
AGAACGCCAAAGAAATCAACAGAGATGACATCACTTGTGCAATATGTCTT
TTGGTTTTGCGAGAACCAGTACAAGCCGTGAAATGCGGGCATcgattttg
tgaaaaatgtaTTGGGGAATTTCATCTTCAGAAGTAAGTGTGAACAGTAG
TCACGTCgaaattttctatatttttgttgGTCGTCATTTTCTTGTGTTCT
ATAAAAAGTTTTCGTTAAGCAAGGAATCTAcagctcaaatttttaattGC
ATTGGAGAATTTTTTATGTTAAACATTTTATTCTAGTCCGGGAAAATGCC
CCAAAGATTGGCAAGAGATTCAAGTTTTTCCTGATgtaggaaaaaaaaga
gaaatactCAGTTTGAAGATTCGATGTGCGAATTTTGTTGATGGATGTAC
GTGGCAAAATGAGCTCAGAGAGGAAGAGGTTTGTAGGCATTATTTCATTT
GATATCATCTGTACGCAGCGaaaagaagttttcaaaaatggCTGTTctag
aaaaatggtcaaaaacgaCAGTAAAGTACTTTGAatctttctttctaaat
ttcTAGTTTTGTGATCTGACATTGTGTTAATTCCTACAGACCCTCTACTT
TACGCAAATTTTTACCAAAATGGATAGTTTAAGTTATGCTCTCATTAGGA
ACAATTTATGTAGTgaaaccatagtataagaaagccgcggctggaatgat
gacgctattgtttttgttgtaaatagatgttctatctgtgtctcTGTGGT
TTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACCgaaccataaaaaaa
tttgttcttacgacatagatagaacaacagaaattcagctgtactcattc
cagccgcggctttcttatactatggtgaaACCATATCACCTTGGAGGAAA
GGGGGAGGAATTACTTGATGATATTTATAATGACTTTGATTTATAATAAG
ATTATAAAAAGGGGAAGAGCCTAGAGGTAGAGGAGATTGATCTATATTTG
AGGTAGCAACCCCCTTCCGTACTTAAGCTTTTGgccaattttctaattta
aggagttgattttattttgcaataaataataacaatcctttatcattgtt
ttaggTTCACCTGAAAACTTGCGGTTTTGTGACCGTTCCTTGTGAATTAG
ATTGTGGAGAATTCGTCCTCCGTAAAAACGTAAGAACGATTTGTTATCAT
TTGTAAGATATGTGAGAGGCCtggaaaacacgagttaaaggACCTTAAAA
AACCTTAAAGTTATgacgtcgtaactcgggtttttttggCCTTGATATAT
ATGAATACAAACCATGAAAATTTTCGGGATAACTTTCTGTAAGGCCCTCA
ATGCCCGTTAGAAAAACCCGAGTTCGGCAAACCCTAATTACctatttgtg
acgtcataacttgagagatatgacgtcattttagaAGATAATGAATTAAT
GATAATTCGATTTTTTCGTGGTTACCTTAATCGTTCGAGTTGATTAACTC
TGTTGATTATGACGAACCTTAATTTTTCTAGTTAGCAAACTTTTATTTCT
AAGGCGCCCCTAAATTTTTCGTATTTTAGAGGTGTATATCGAGTtatgaa
atttatattttggaatcttttaacttgtttttttttggtgtaagattttt
ttttcgagttaCTTGACTCGGATTTTTAAGATGCCCGAAAGACCCGTGGc
tgaaaaactcaaaatatctAACTGAGGGAGGGGGGAGGAATGTAGTGCGA
ATCTGTAAAGGCGAGTCCTTACGCAAATTGAACATTTGCTTCAGTAATGT
TGGAAATAACTTAGTATTTCAAGGATGAGATTTTTtggattatttatttt
ttttattttttatttattaattgtctttcaggctcttccatattttacaa
tggctattcgtcctatgtaaaaataatcatatttaaataaaaagataatt
atattctatgaaaaaaaatatgctgtagaaacaaaacacacaaaaaaaaa
caactcaagGATAGTAAAAACGGGGATAATTTATTATTTCGCGAAACCGT
AAaactgtagaaacaaaacacacaaaaaaaaacaactcaagGATAGTAAA
AACGGGGATAATTTATTATTTCGCGAAACCGTAAaactgtagaaacaaaa
cacacaaaaaaaaacaactcaagGATAGTAAAAACGGGGATAATTTATTA
TTTCGCGAAACCGTAAaactgtagaaacaaaacacaaaacagaACTCAAG
GATACTGGCAGAGCTCGCAAAATTgcagaaaaagaaaacagaaagtaTAA
CTTGTTGGTGTTGTAGTGGCTGATTAGGAAAAGTTCGGTTGAGTTGTAAT
AGTATTGAAGTAGCTAATCCTGCGAAAATTTCAGTGTTGATCAGACCACC
AGactaaaatatcaagtaaatatTTTAAGGTAAATATTAATAATATAACC
ACTAGACCTCATGATCATAGAATCTACAATATATTGGCTTGAAataggaa
aaattttgaaagtgagtgagGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcatgtat
tgcttggctctacatatgatacctctaactttgaacacctccagaatgtt
gaaaaaagcattttacgagataagtttcaattataattttcatcattatt
catggaAATtgttaatcgacagatttggcttggcgtcagttttgtttggt
tgatgtttggtatcatGATCattaaagcaatgaaatgccacacagtcact
ctacacatgatgcctccagccatgattggtatcagaatgttggaaaaaaa
cattttacgagaaattgttgatagaaattatattgacttatttttacaat
tttggcggtgtgggtttagttggttgataatgtttacactgtgggatggt
ttccaaaaaaatgttatattgattgttgtttgttggaattgattaccaaa
aaaaagaaaagagaacctttttttgataaatactttatttttttcatgat
tcgAAAAAACCAtgtggatggttgacatctttctctagtcttgtaaacca
atgcagtgtctgttttcaaattttgaaagctctttacctactgaattgaa
gctctgactagctctgtttttaaaactttgagccatgattttttctttgc
tgctattaaagatagatttttaaattgtcgtagtgtaaatttatggtaaa
attttagtttttgagtttagttcatctacagtagtattttttcagtaatc
ctttcttgtaaatttagtaacatttaaccagactcattgccctcattata
ttcaaatttgtatttttttaggactgataagtacatatttttaaatacca
aaacaaagcaaacatgccaaacaacatgccagttctttctggacaaatat
gtatactttattgtgtgctttgatttctattttaatcaaccctctcaact
gctgatctttcaactatcatttaggagtatagaatgggcttccatagtac
cattttctctaagtattttgttcaactaagtagacttcttgactgtcctt
gtcccttatgttaaagttgttctgatggaggacattgctatttttggtag
ctttcacatatcaataaggagctttggtgtaaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGATACGCAACATTGAGGAGTAGTTTA
GAATGTTTGTTTTTTCCTTCAATTTCAACCCATAGATGTTCGAGGGCTGG
GTTGATGTTGGTGATATCTTTGCGTATTTTGAGCTTGATGTCATCTTTGA
TGTATATGCCGACACCGCCACCACGCCTGTTGTCTCGGTTATGATAGTAA
AGTTTGTAACCTTCAATTTTAACATAATCAAGCAAGAAAGGATTGTCTTT
TAGCCAGGTTTCGGTGAGTGTTACCGCATCGAATTTGTATTTATTAACAA
AGAGCACAAATTCATCGAACGTGGATACCATGGACTGTGTATTGATGTGA
GCGATGCTAAACAAATGTCTAAAAGTCCATCGTATAATTCTACAGTTGAT
TACATATCTTTTTAGTTTACTGATTCTTATTTAGATAACGAATCACGTGG
ATACCGTATGCCCAATGGTCTCCCCTTGTGAATACAACGACTCTGGATGC
TACTTTAAGGTAAATTTTTCTTATGTTGAAGCTGCTATTTTAATTtccaa
agaatgaaaaaaattacaatcagCGTGAACTTTTTTTTGCGAATCGAAGA
TTATCGAAGATAAATTTTGCGAAGAGGGTCAAACTATGCGAAAATCGTAG
ACCGGAGTCATAGTCCGTTTATTACAGTAATACTAGTGTTATATGAAAAT
ATGATAACATGATAGTTGTTCCGGGATAATATTAGTTTGTATGCAATTTA
TTCCTCTTATTAATTTCTGTCTGTCTCAATTAGTCGTTTAGTATACTAGA
CtacaaaaatcccaaaaattgaCGCATGCGAAATTTAAACCATATAAGGT
GTTCAGAGTTTTTCGCTAAGTGTGGGAAATTTTACAAGAGTTCcgcaaaa
gtttcttttttaaagtaGCTGTACCACAGCACTATCcggatttttgtcat
tttggcgcGTTTGAGTGTTAAGGGAACGTTTGGATTGTTTTTAGTAAGTA
CGGTAAAGTATGGAGGTAAAAAAAGCCGATATATTATTTGAAAAgctaaa
attctttgaattgtNCGGTAAAGTATAGAGgttaaaaaactgttatatta
tTTAAAAAGCTAAGATTCTTTAAATTGATTGGTTTCAGGGCACCAAATTA
CAACTGGACAATCATATGGCACAATCGGCCAACATGCATTTGTCTCTTGA
AATGAAACGtgagattttcaaaatgaaaaaagaattcgATCAAAAGTTGA
CAGCGAAAGATCTCGAAATtcaacaaatgaaaaatgaattcgTTGAACAG
TTGAAAGAAAGGGATAACGAAATCGGGAAATCCGAACTTGGTCAggtctt
gaaaacaaaagaccAAATTATTAAAGCTTATGACAAAATCATTCAAGCAC
ATGAAAATACCATTCAAGCTAAAAACGATACGATTCAAGCTAAAAACAGA
ACAATTCAAGCACATGAAATTAGGATTGAAGCTAAAAACAGAACGATTCA
AGTTAAAGACGATACGATTCAAGCACATGAACATAAGATTCGATCTAAAA
ACAAAACGAATCAAGCTCAAGACGATACGATTCAAGCATATGAAAATACG
ATTCAAGCTAAAGACATAACGATTCAAGCACAAGAAATTACGATTCAAGC
TAAAAACCGAACAATTCAAGCACATGAAATTACGATTCAAGCTAAAAACA
GAACGATTCAAGTTAAAGACAAAACGATTCAAGTATTGGCGGAGAAATTA
CAAGTCGccgaagaaaaattgaaaaggNAACGATTCAAGTATTGGCGGAG
AAATTACAAGTCgccaaagaaaaattgaaaagatgaaGAGTTGCAAGAAG
TTCAAATCCCTTTATAAGAACTTAATAACGACTGCGACGAGTGCTctcct
ttttttatttgaacaaAGAAGTTCAAACTACCATCATAGAACTTATTGTC
TAAAAAATTGAGGTTTTAAcggtaaaatatttttgcgatttagccaaatt
ttgtaatattttcNACTACCATCATAGAACTTATTGTCTAAAAAATTGAG
GTTTTAACGGTAAAATATTTTCGGTAAAACTATTCAAATTTCACGCACTT
AATCTTCTAATTAATTAcccaaaatcataaataaataaaatgttgGCAAT
GGCAGCACTGCCATCAAATCGTTGGAGAAAAAATTGCTGACGAAGTTGAA
GACAACCGATAGAtctctttttgatttgaaagaagAATTTATGCTGACTA
AGCAGGAGGTTGAAAAAGTCAAACAACAGCATCAAAAAGATGAATTAAAT
TTGGATATCTGCGCACCATCACTATTTAACTATATATGGACTatcgaaaa
tttcgaaaagaaaattgacGCTGGTACGAAATGGACATATAGGACATATA
GTTCAGCAAGTTTTTTTGCTAAGCATGGTTATAAAGGATGTATTTCCTCC
ATGTTTCGCGAGACCAATCAAGACAACATATACACTTATGTGTCAGTTTT
CTTTAATAATGAGGTGGGACCTCATGACGATACTCTAGAATGGCCAATGC
CTTGGAAATCATTGATTTTCACTTTGATATTTAATGGAGTTGAAATTGCT
CAAACTGTGAGAAGAAGTACAGATGAAGGAGGTAGATGGAAAGATTCATT
TAAAAGACCATGTAATGTATGTGCTTACCGGCTTGGAAATCCGTCAGCAT
TTGAGCACGGCTTATTCAAGGACATAACTATGAATGATAGTGTTACAATA
AGATTTGAAATGAATTAATCTTCTAGTCATTAATTGGTGTAAATGTCGTT
ATATATTACGTTTTCGtcgtctttttagagtaaaTGTATGAAGAGTTTAT
AAAGATTAGAAATACGGGGgcgttggaaaattttcaaatttagttCGATA
ACCTCGAACAAATACCAAAACAACGTCTAGtctgtccatatcttctgacg
actggacgacagatgaagattAGACAATAtttaataaattctaaaattat
ttcgtagataattaattaataattctatgaataaattAAGTAAAGTGAAT
GAATATGGAATGCAATCATTAATGCttatatgaaaatttgaataatttct
TGAAACTGTTACTAAGAACAATGAATcaacaattcgcaaaaaatgAATAA
CCTTcctgatttttcgattttatgcTCAAATTGCTGATCTAAGTGATAGC
GTATTATAGGgtgattcttgagaaaaacGTGTGTTTTTAGGGCGAAAGGT
TCTACAGTGTTATTATAAAGGAACTATCACTCTTACCTAAGTAGTTTCAT
TTTTCTAAGGAATGCTGTGTCTTTAAATTTCAAGGCCATTGATTTGTCTA
TATTCTGttttttgatagatttttttgttcaagaggtattttgaaagtga
tagtaTCGAGATATGAGCTTACTGTAGCAAGCTATAGTTTCGGAGAGGGA
AGAGAAAcggaaatttctttttaatctgATCCTTTAATTATTTGTGAAAA
GTTCGATCTTGATCgctgaaaattagatttttaaataatatggcAGCTTG
TAAACCAGAAGAGTATGGTTTTGATGTGACGTTCATCTGGGAAGACGAAA
AATCTGAAGTATCTGAAACAACAGAAGAAGATTCTGTACAGAACGCCAAA
GAAATCAATAGAGACGATATCACTTGTGCAATATGTCTTTTGGTTTTGCG
AGAACCAGTACAAGCCGTGAAATGTGGGCATcgattttgtgaaaaatgta
TTGGGGAATTTCATCTTCAGAAGTAAGTGTGAACAGTAGTAAGTTCACGT
CgaaattttctatatttttgttgGTCGTCATTTTCTTGTGTTCTATAAAA
AGTTTTCGTTAAGCAAAGAATCTACTACTCAAATTAATTGCATTGGAGAA
TCTTTTATGTTAATCATTTTATTCTAGTCCGGGGAAATGCCCCAAAGATT
GGCAAGAGATTCAAGTTTTTCCAGATgtgggaaaaaaaagagaaatactC
AGTTTGAAAATTCGATGTCCGAATTTCGTTGATGGATGTACGTGGCAAAA
TGAGCTCAGAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030652XLOC_030652Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048155-exon-scaffold_141-1491911889:188200..188482TCONS_00048155-exon-scaffold_141-1491911889:188200..188482Clytia hemisphaericaexon
TCONS_00048155-exon-scaffold_141-1510915933:188200..188482TCONS_00048155-exon-scaffold_141-1510915933:188200..188482Clytia hemisphaericaexon
TCONS_00048155-exon-scaffold_141-1575043694:188200..188482TCONS_00048155-exon-scaffold_141-1575043694:188200..188482Clytia hemisphaericaexon
TCONS_00048155-exon-scaffold_141-1491911889:199527..199662TCONS_00048155-exon-scaffold_141-1491911889:199527..199662Clytia hemisphaericaexon
TCONS_00048155-exon-scaffold_141-1510915933:199527..199662TCONS_00048155-exon-scaffold_141-1510915933:199527..199662Clytia hemisphaericaexon
TCONS_00048155-exon-scaffold_141-1575043694:199527..199662TCONS_00048155-exon-scaffold_141-1575043694:199527..199662Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_141supercontigscaffold_141:188200..199662 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.191284	0	0.665916	0.360064	1.06956	0.771738	0.611799	0.176341	0.924686	0.884529	4.32604	4.89331	0.101773	0	0.160296	0.137253	0	0.393862	0.275483	0.296535	0.492062	0.414625	2.34839	3.48093	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048155 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top