TCONS_00048130 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048130
Unique NameTCONS_00048130
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048130 ID=TCONS_00048130|Name=TCONS_00048130|organism=Clytia hemisphaerica|type=transcript|length=149bp
ctttcactttctaGATTTTCTGAACGGGCAACATCATTTTCACAAGATCA
AGATGGCGTTTTCGCACGTGTGCAACTTATGTCGTGTGCACGTGTGAGCC
TGCTGGCTGGAAGATCATCAAGAGATCATCACTCCAATTTTAGTAGGTA
Run BLAST on NCBI

transcript from alignment at scaffold_140:9596..9744

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048130 ID=TCONS_00048130|Name=TCONS_00048130|organism=Clytia hemisphaerica|type=transcript|length=149bp|location=Sequence derived from alignment at scaffold_140:9596..9744 (Clytia hemisphaerica)
TACCTACTAAAATTGGAGTGATGATCTCTTGATGATCTTCCAGCCAGCAG
GCTCACACGTGCACACGACATAAGTTGCACACGTGCGAAAACGCCATCTT
GATCTTGTGAAAATGATGTTGCCCGTTCAGAAAATCtagaaagtgaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030635XLOC_030635Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048130-exon-scaffold_140-1491911889:9596..9744TCONS_00048130-exon-scaffold_140-1491911889:9596..9744Clytia hemisphaericaexon
TCONS_00048130-exon-scaffold_140-1510915933:9596..9744TCONS_00048130-exon-scaffold_140-1510915933:9596..9744Clytia hemisphaericaexon
TCONS_00048130-exon-scaffold_140-1575043694:9596..9744TCONS_00048130-exon-scaffold_140-1575043694:9596..9744Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_140supercontigscaffold_140:9596..9744 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048130 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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