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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048118 ID=TCONS_00048118|Name=TCONS_00048118|organism=Clytia hemisphaerica|type=transcript|length=504bp
CAGGACAAAAGgtagatacataaactcgcttatGCCGCGGTGTGGGGTAG
AAATATTTGAAGATAATGGTTCGGTAATCTCATTTTAGATCTTATGCGTG
TTTTCAGGGAAACGTACAAGCCAATGCCTGAAATATCATTGATGGAGTAC
ATTTACGATATTCGGGAATGTCCAACGGTGTGGTATAAATGAAATACAAA
AACTGGGCGAACGACAAAGAATGGTTGCCACTTGACGAGacactaaaaat
tttaaatAGGAAAACATCAACCTTCAAATCACACCGAAGCTTGTGCCAGT
TAACAAAGATTGCCAAGACTTTGCACGCCTGAAGAACGATATTGGAAAGT
ACTACCGANATGATACCGTGAGATGGCTGGATTCCAAAAGCAAGCGTCAT
TTTTTATAGGGGTTTACACTAATCAACGACGTCCTGACCAAGTCACATCG
GGAATATCTACGTAAGAAATACAAGGAATTTAAAGAGATGAGGCTAGATG
TATA Run BLAST on NCBI transcript from alignment at scaffold_140:138465..139283- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048118 ID=TCONS_00048118|Name=TCONS_00048118|organism=Clytia hemisphaerica|type=transcript|length=819bp|location=Sequence derived from alignment at scaffold_140:138465..139283- (Clytia hemisphaerica)
CAGGACAAAAGGTAGATACATAAACTCGCTTATGCCGCGGTGTGGGGTAG
AAATATTTGAAGATAATGGTTCGGTAATCTCATTTTAGATCTTATGCGTG
TTTTCAGGGAAACGTACAAGCCAATGCCTGAAATATCATTGATGGAGTAC
ATTTACGATATTCGGGAATGGTTGGGTCCAATGATGAAAGGCCTTCACAA
TATTGTGTATCCGCACTGTTTCAAGATCGTTAAGTCCAACGGTGTGGTAT
AAATGAAATACAAAAACTGGGCGAACGACAAAGAATGGTTGCCACTTGAC
GAGACACTAAAAATTTTAAATGTAAGTGATATAATCATCAACTTACAGTA
TCGTTATAATAAAGGTGTGGACCCTACGTGAGACATTTTGATTTGCGGAC
TGCAGACTTCTATATGATTTGAAAGATTTGCCATAAAGACTGCCTCCGAG
AAGAAATGTTCATTATATATCCGTGGTTTTGCGATCATGAGACATACGGA
GGTAAAAATAAAATAACTGTAGATCCCGGTATTCTCAATTTTGTGAAACT
CTATTTTTACTGTTCATATAAGAGGAAAACATCAACCTTCAAATCACACC
GAAGCTTGTGCCAGTTAACAAAGATTGCCAAGACTTTGCACGCCTGAAGA
ACGATATTGGAAAGTACTACCGANATGATACCGTGAGATGGCTGGATTCC
AAAAGCAAGCGTCATTTTTTATAGGGGTTTACACTAATCAACGACGTCCT
GACCAAGTCACATCGGGAATATCTACGTAAGAAATACAAGGAATTTAAAG
AGATGAGGCTAGATGTATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048118-exon-scaffold_140-1575043694:139114..139283 | TCONS_00048118-exon-scaffold_140-1575043694:139114..139283 | Clytia hemisphaerica | exon |
| TCONS_00048118-exon-scaffold_140-1575043694:138963..139049 | TCONS_00048118-exon-scaffold_140-1575043694:138963..139049 | Clytia hemisphaerica | exon |
| TCONS_00048118-exon-scaffold_140-1575043694:138465..138711 | TCONS_00048118-exon-scaffold_140-1575043694:138465..138711 | Clytia hemisphaerica | exon |
| TCONS_00048118-exon-scaffold_140-1510915933:139114..139283 | TCONS_00048118-exon-scaffold_140-1510915933:139114..139283 | Clytia hemisphaerica | exon |
| TCONS_00048118-exon-scaffold_140-1510915933:138963..139049 | TCONS_00048118-exon-scaffold_140-1510915933:138963..139049 | Clytia hemisphaerica | exon |
| TCONS_00048118-exon-scaffold_140-1510915933:138465..138711 | TCONS_00048118-exon-scaffold_140-1510915933:138465..138711 | Clytia hemisphaerica | exon |
| TCONS_00048118-exon-scaffold_140-1491911889:139114..139283 | TCONS_00048118-exon-scaffold_140-1491911889:139114..139283 | Clytia hemisphaerica | exon |
| TCONS_00048118-exon-scaffold_140-1491911889:138963..139049 | TCONS_00048118-exon-scaffold_140-1491911889:138963..139049 | Clytia hemisphaerica | exon |
| TCONS_00048118-exon-scaffold_140-1491911889:138465..138711 | TCONS_00048118-exon-scaffold_140-1491911889:138465..138711 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_140 | supercontig | scaffold_140:138465..139283 - |
Blast
The following BLAST results are available for this feature:
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