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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048019 ID=TCONS_00048019|Name=TCONS_00048019|organism=Clytia hemisphaerica|type=transcript|length=2543bp
ATTATTTTATTGATATAGATTTCAAATGTACCAGCAGCCAGTGGCGTATC
CACTGGGGGAGGGGGCAGGTAGGATGGTTGCTCCCCCGAAAATATAGATT
GGCTCCTTTAAGCTATTTGACTGTTCTTAGACAAAAAATTTCGCCTGCGG
TGTCAAAGAAAACTCTCTGCGACATGAAATATCATGATTTCTGTACtatt
tgtgacctttttctcgctagctttgtttttcaattcaatttctttttcaa
tctcGGCCCTCGAACCGAAAAACTCGTCACGACGCCTCTGGCAGCTGCTA
TTATTGTAGcttcaaatcatttttttcaaattgttttgagcGATCAAAca
acatttcaaaaataaaaattaactgGTTAGGGGGAGGGCCAGAAATATTT
TCGAGAATATCGCCCTTGAAAAGTGAGAGTTTTGTTTggaattcttgaaa
atatcctccaccccaccctagtagatactttctgaccactccttAAGGAG
GCCTTTCTCTCTTTCTATATTATATATATACGCGAAGGTAGCAGGAGATG
ACACTGGATTACTTTACTTACCTTTCTCTTTAATTGCTTAGCATTTAGCC
GAGAGGcatcaagtatttttttttgtacCAAGTTAGAAGTCTTTGGGGTC
GTACCGGCACGAAATTGAATCTATGACTTCGTAAACCATAGCTGGATAGG
TAGAGTATACACATACTCTCCCTTTACACAAAGGTTTTATACCAAAGTCA
CTCTATAAAGGCTGTTGTTGAGGGGGAAGCTCTGCTTCTCCGCTCACCAC
AAGCAGCTTGATAGCCTTGGAAAGGACGAATTACGTGTCTGCGGATAGTT
AATAGACACATTTTCTCAGAACAGCTCTCAAATTAGGTCACGTATAGGGA
ATTTCAAACTCCAAATGAATGATGTTTCAAAAACATCAAGTCCTTTTTTG
GCTCACCGTGCTAGTTTTAAACGTAGTTTTCCTGCTTTTAAGATATCTAT
GTCCTTTGGTCTCGGGGACTTTTCAATTAAACAGTTTGCGTTAATGCTTT
GTTAGCTTCCTTGTTTTACCGGTTTATAAGTATTCGGAGGCTTTTTTGTG
TGACGTATTACCAATTCATATACGAcggtttttgacagtttttttgTATG
CGTTTCTCTCGAGTTTTCTaggagtttttgttttgaagttaAGAATGACG
TATGCTTATTTTGGTATTGTCATGATGATTGGTATCACATTGTTATGTTT
CTTTGCacatattttattgttttcaactaCGGCTTAACAATGATAATAAA
ATAATTCCATGTTAGGTTGAAATACGTCATTCTGTACAGTTTGCAAATTT
ATGCAAAATATATAAAAGGACAATTTTGATCGTCTATAAATCAAATCAAA
CATAGTAAGCAGTCAAAGCATACCTACATAAACGCAAAGGGAAGCACAAA
GAAGTTACAagtaaatcataaaatatgGACAAGTATGGATCAGAGAGCAT
TGACTTCTATCCAACGAACAACAAATTCAACAAAGGGATGAACCAGCAAT
ATCAAGAAACATTTCTGGAGAATCAACAACTCAAACAAACTGTAGACATA
TTGAACAAGAGACTGCAAGCTGTCGAAGAACAGTCTAGACTACAGTATAA
TGACCTGTTGGAAGCAATGGCGCAGTTATCCAAGAAGATCAACGGAGCTG
ACAATAATGGGNTATTAGAAGCAATGGCACAGTTATCCAAGAAGATCAAA
GGAGCTGACAATGATGGAAATGTCCAAGAAGGTGCGGTTGAGCAGATACA
AAACAACACTGAAAACCTTGCAGATCTTGACTTGAAATTCCAACTCCATG
AGAACTCGGTCAATGACGGCCATCTTGTTTGGAAGATCAACAATTTTCAG
CAACGAACAACTGATGCAATTATTGGCAAGACAAGAGCATTACATTCCGC
CCCTTGCTTTACGAGCAAGTATGGATACAAGTTCTGTTTAAGGCTGTATC
TACACGGTGATGGTATGGGTAAAGGAACACACTTGTCACTTTTCTTGGTT
CTTATGAAATCAGAATATGACAACATTTTGGAATGgcctttccaaaagaa
aatcaaattcactTTGATCAATCAAGAGGACAGAAGTAAAGATCATGTGG
AGAAAATGTTTCCAAACAAAGATtcatcaagctttcagaaaccGAAAAAA
GATATGAACATTGCTTCAGGTTGTCCAATGTTTATGAATTTGAACAGATT
GCAGCCTGAAGGATTTTTAAAGGACGACTCTTTATTTGTCGAGGTtaaaa
tagattaaatttttacACCGTTTTGTGATCTCAAGAAATAGTAACTTAtt
aatttaaatattttcataattattatttattattatttttcaaaaatgaa
aagtcGATACACATAAACATTTTACCCTGATTTGTAATTTCGAGAAATTG
TAATTTATTGATTtagatatattttttataattaatatttattaatattt
tttcaaaattgaaaagtcAATACACCAAACATTTTGCAACATA Run BLAST on NCBI transcript from alignment at scaffold_14:731377..749271+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048019 ID=TCONS_00048019|Name=TCONS_00048019|organism=Clytia hemisphaerica|type=transcript|length=17895bp|location=Sequence derived from alignment at scaffold_14:731377..749271+ (Clytia hemisphaerica)
ATTATTTTATTGATATAGATTTCAAATGTACCAGCAGCCAGTGGCGTATC
CACTGGGGGAGGGGGCAGGTAGGATGGTTGCTCCCCCGAAAATATAGATT
GGCTCCTTTAAGCTATTTGACTGTTCTTAGACAAAAAATTTCGCCTGCGG
TGTCAAAGAAAACTCTCTGCGACATGAAATATCATGATTTCTGTACtatt
tgtgacctttttctcgctagctttgtttttcaattcaatttctttttcaa
tctcGGCCCTCGAACCGAAAAACTCGTCACGACGCCTCTGGCAGCTGCTA
TTATTGTAGcttcaaatcatttttttcaaattgttttgagcGATCAAAca
acatttcaaaaataaaaattaactgGTTAGGGGGAGGGCCAGAAATATTT
TCGAGAATATCGCCCTTGAAAAGTGAGAGTTTTGTTTggaattcttgaaa
atatcctccaccccaccctagtagatactttctgaccactccttAAGGAG
GCCTTTCTCTCTTTCTATATTATATATATACGCGAAGGTAGCAGGAGATG
ACACTGGATTACTTTACTTACCTTTCTCTTTAATTGCTTAGCATTTAGCC
GAGAGGcatcaagtatttttttttgtacCAAGTTAGAAGTCTTTGGGGTC
GTACCGGCACGAAATTGAATCTATGACTTCGTAAACCATAGCTGGATAGG
TAGAGTATACACATACTCTCCCTTTACACAAAGGTTTTATACCAAAGTCA
CTCTATAAAGGCTGTTGTTGAGGGGGAAGCTCTGCTTCTCCGCTCACCAC
AAGCAGCTTGATAGCCTTGGAAAGGACGAATTACGTGTCTGCGGATAGTT
AATAGACACATTTTCTCAGAACAGCTCTCAAATTAGGTCACGTATAGGGA
ATTTCAAACTCCAAATGAATGATGTTTCAAAAACATCAAGTCCTTTTTTG
GCTCACCGTGCTAGTTTTAAACGTAGTTTTCCTGCTTTTAAGATATCTAT
GTCCTTTGGTCTCGGGGACTTTTCAATTAAACAGTTTGCGTTAATGCTTT
GTTAGCTTCCTTGTTTTACCGGTTTATAAGTATTCGGAGGCTTTTTTGTG
TGACGTATTACCAATTCATATACGAcggtttttgacagtttttttgTATG
CGTTTCTCTCGAGTTTTCTaggagtttttgttttgaagttaAGAATGACG
TATGCTTATTTTGGTATTGTCATGATGATTGGTATCACATTGTTATGTTT
CTTTGCacatattttattgttttcaactaCGGCTTAACAATGATAATAAA
ATAATTCCATGTTAGGTTGAAATACGTCATTCTGTACAGTTTGCAAATTT
ATGCAAAATATATAAAAGGACAATTTTGATCGTCTATAAATCAAATCAAA
CATAGTAAGCAGTCAAAGCATACCTACATAAACGCAAAGGGAAGCACAAA
GAAGTTACAagtaaatcataaaatatgGACAAGTATGGATCAGAGAGCAT
TGACTTCTATCCAACGAACAACAAATTCAACAAAGGGATGAACCAGCAAT
ATCAAGAAACATTTCTGGAGAATCAACAACTCAAACAAACTGTAGACATA
TTGAACAAGAGACTGCAAGCTGTCGAAGAACAGTCTAGACTACAGTATAA
TGACCTGTTGGAAGCAATGGCGCAGTTATCCAAGAAGATCAACGGAGCTG
ACAATAATGGGNTATTAGAAGCAATGGCACAGTTATCCAAGAAGATCAAA
GGAGCTGACAATGATGGAAATGTCCAAGAAGGTGCGGTTGAGCAGATACA
AAACAACACTGAAAACCTTGCAGATCTTGACTTGAAATTCCAACTCCATG
AGAACTCGGTCAATGACGGCCATCTTGTTTGGAAGATCAACAATTTTCAG
CAACGAACAACTGATGCAATTATTGGCAAGACAAGAGCATTACATTCCGC
CCCTTGCTTTACGAGCAAGTATGGATACAAGTTCTGTTTAAGGCTGTATC
TACACGGTGACGGGATGGGAAAAGGAACACACTTGTCACTTTTCTTGGTT
CTTATGAAATCAGAATATGACAACATTTTGGAATGgcctttccaaaagaa
aatcaaattcactTTGATCAATCAAGAAGACAGAAGTAAAGATCATGTGG
AGAAAATGTTTCCAAACAAAGATtcatcaagctttcagaaaccAAAGAAA
GATATGAACATTGCTTCAGGTTGTCCAATGTTTATGAATTTGAACAGATT
GCAACCTGAAGGATTTTTAAAGGACGACTCTTTATTTGTCGAAGTTAAGA
TAGATTAATTTTTTATACGATATTTAGTACTTTTTAAGTAATAGttaatt
tattgatttatttctgtAGATAATTTTAGTATCATGATATCAAGTTCCTT
GATCATACCTTGtaaattttgttatttatttctatTCATTGCTATTTATT
TGTATACGATAACCGtgacataaaaatgaaaatataaagtAATAAATTAG
ATTCCTGGAATaattttctatttgtttttacCTTCTATCGTATGCCTTTA
GAAAATTTGCATTATTTTATTAGGGATAAATTAGCTCGTTTCTTTTAGAA
GATTCAATTTTGACAATTCCCTATAatgtatttgaaaattcaagaaGATC
CTCCACAATCAGACATCGTAGGGTCATTGTCAATTGTTTGTCGATAGACT
ATTTCGAAACACTCTCTAACATTGCTATGCATTTTCTTGCTTATTTTGCA
ATGCAGATTGATGTCTGAGATTAACTCTGAGCATCTCATCTTACTTGTTA
TTTGATCTTACATACTGAATTTTTCCAGTGTATGAAATATGAGTCTTATT
TCtatcatgaaggtaataaagatatagatggagagaaaacgtctcggtga
CCTATATGGTCGttcaaatcttttataaatctaatcaaagcggcttttct
ttgatgtaccatcattggaagcaaaaaaatccgaaatgtaaatttataag
aacagaaaaagGCTGgtccgttgattttgaaaaacttaattttgcgagaa
atcttagttaaaatgcgattcgaaatagtttcaactgatttaaggataaa
agaatatattaatttcataaggatatatttctgggctggcattttgtaaa
cattgagagtcgcatcacattatcattgaaattttcttatcttaaaatct
tcacgtctaagtgagcagcggttttcatactttcaaaattaatcatctta
ttcccaaagcaaccaaacagctgtttgcttccgatgataaatcagaatag
aacaaaaggcattgactctccatctatctttattaccttcatttTTCTAT
CTTTTGAATATGAAATAGTTACATTGAacacccttgtgtcacagacccgc
tgggaccccagttccactggaaaatttggcaaaaatgttgtccccactgg
gaaaataccctggaactTCCGCCCTAATGAGAAATTGACtctgattttat
ccccatttgaaattcaatgtctaAAAACTTACTCCAAACCACCCCCGCTg
gattttttaaacttgaaataatagaatttctatccacaTTGAGAtttaaa
tagaaatttttatctagggaagaaagttccaccggggctgtgagacataC
AGGGTGGCATTGAAGTATCAGAAGCACATCTAAAGGGAATTAAATGATTA
GATTCAGATAATGTCAAAAGACAGcaaatatcttcatttggaAAACATCG
ATAGTGCCTAAACTACTCTAACTTGCCCGGAATGTATTCGAACTTTCTCG
CACTTACTACGAACACACTTGGACTTATGCAAAAGTTCTTGAGCTCACTC
GACgttttcgaacattttcttaactttctcGAACAAATACTCGAACTTAC
ttgactttttcaaatttcctcgAAAAGTCACCTGAGATTACTCAAACTTT
TCTCGaactttttcgaattttcaaaaaatgctcaaaattatttattgaaa
tttcTCGACTCTTTCGATCTTTCTGAACTTTAGAACTcgctcaatttttt
ttgaaacacacCCGAACTTTCTCGAATTTACTCAAAGTTTCTCGAACTTA
ATTGAAATCACTTGACTTTATCGAACTTACtcgaactttttttattttaa
tcgaACATATACTACAAGCCCGAGTGAAGAAACTACAGTACAGTGAGGGT
TGATCATTTCTGCTTACGAACATTATCTAGTATTTAGTTAAAAAAATCAG
GGAAACAGGAGACATTTGTGAATTCaggttatttttattttgaaatcttt
tttttttggaaattcgaTTTTTCTTTCCTCAAACATACTCCACGATGAGT
CGTGTTAAAAGTATTTTGTCTTTGATCGTGAATTTTGCccttatgtatta
caatgaagtgaatacagtcaaTTTCATGTTGTATTCTGACCAGCCACTaa
aaccgttggaaaaccaacggatctgGTGACACTCGAACTCATAACCATGC
CATTGCGGGTATATGCTCTATCATTGAGCTACGTTCCCTATGTGGAACCC
GAGGACTCAATTGACATTCGGTAAAGCTTTTGTCTTTAAACTTAGCGAGT
TAAGAGGAATTAAAAAGCTCCGatttttctctgaaaatgtAAAGTAAAAG
TCTTGTAAATCATCTAAGATTCTGTTTTCATTGATAATCAAGTGGTTGTC
AGATTGCGTAATTAATGCTATTTATAGAACAGTTACTGTatcaaaataca
tatttttattttttatacaaNGCGTAATTAATGCTATTTCTAGAACAGTT
ACTGTatcaaaatacatatttttataCAATTTGTTACTTAAGTTATCCTG
ATGGCTTGGTCGATTTTCAAGTTGCTATATAAAGTCATCATCTGCACAGT
CGATTATACAACAAATATGCATCATCTACTTGTAACTTTGAGCTTGTTTG
CAAAACTGAGATCTAAAAATCTCGAATCTTTGATTTGCACAACTTATGAT
ATAACATATAAATTCTTTTTATGCATAACTAGACTCATACTGTGATGAAT
GAAATTGCccctggtcagggtacctttctttacctccacgagtcccagaa
aggctcgcaaaaacaccaaaatagaaaaaatcttgccttttttggaaaac
ttggggggaaagtagaaaattggagaaaattttggaatttcagtcccatt
cagggtcactctttcgcaaattttggcaaaattaaaaaaaaaaaaagtcc
cactcagggtccatttttcgaacctcagggGAGcaccccgtcggtcggca
agggtagtaccccccccccagggAGACGAATCAAtcctgaaaatttgagc
tctttTCGATCACTGTATATAGCTTTGTTTATCCATGTTAAAATGtctca
taaaaatcaaaacgtaTAGCCCGGCCTCGTTTTCAtttaattctattgtt
taaaataaaagttaggctacgtcatatcttccttcgtttcgatcGTGAAA
CTCCTATTtttcgggatatgagcactgctcttgttttgaatattgaaatt
tctccggataaatcgcatgcgcacttaggtcttaatgaaacaatagagag
tttcgaaatcTAAGCctatcagctgtgttttaaacattcctTTATTTGAA
ATCTTCATTGCTCATTCATCgtttgtgaaagttgtctattatgtttaaac
cttttaataagcaattcccggtggagGTTACTAGTGGCcgctatagcagt
gcctatagaccaagagtaagacCTAaataaaagcctggagctgctctatt
gtgtagactaaatAAAAGTTTAATTCAAAATAGCTCAAAAACTGGAagag
ctttttagataatcctttttttatttgtttcgtattttttttACAGAGTT
TTATTTGACCAAAATGAAACACTCAAACATTGTAACAAAAAAGTCGAAAA
CatctcgggaaaggtgtattgcctTTAGGcgtgaaaaaaagactgggacg
gtttttaGGGttgtaaaacggacaaaaagaTGCCCGTGTGTCAATtgacg
gctacggtcgaaaaggtgtattgcattttttaaaagaatcatcaaaacat
aaaagcACCCGTTTTGTCTGATTGTCAGTATGACAGAAGAATGTCTTCTG
ATGGGTAAAAAATTGCATTGCTCACATGTAGGTATATAGACTGGCTTTAA
ATACATTGGACGATGAAAGGAATTGGAGGCCTTCTATGTATATGGTGTtg
tttttttgtatatttcctaaaaatctagtttttttgtatgagtttttttt
ttcgatgttGTGTTGCTTCCAAGAATAAATCAATGAGCGTGGTAAGCGTT
TTTAACGGCACTGTAGGGAACTACCACTATCAACCTCGTGTGTTGTCTTT
TTGATGGTGTTTTTGCAACTGATGTTTTTTCTTTAATAGATATCGAGAaa
tcataatttatttatttttgcgaTTTCCAGATACTTTCTATTCTGGCCTG
CAAAATACACCAGTGttcgaaattcgaaaaaaaattagcaCCCATATAAT
TCGGGCTCCTTTATTGATATACTCACTAAAAATGTattaacaagtgcttt
gactaaaaaaatcgagtgaTCTCAAAATCCCCCTAACTAGGATGTTGCAC
CGTGTCacgtagacgatgttatcgtccgttacagtgatagtaaaggcggc
ggaaaaatggcggtatgacGTTATGGCgatatacggaaaaaaatcggcgg
gagagtttcgaagaaacggacgataactctttggcataaatttttttttg
cggttTTGCTTNNNNNNNNNNNNNNNNNNCTAACCAGTGAGACTGGTTAG
TCGCTCCGTGGTGAAAACCGCCTAAGTTTAAAGGCCGAGCTTGGTTCAAA
CGATCAAAAACACGCTGGTCTCAGGGAAGAAGACACAAGGACAAGATGCA
AGATGGATCTattatggattttttcttcttggttcatttgttttattgag
acTACAAGATAACTTAGCTGAAGGGAGTACTTATTCCTCAAGTATGCTTC
TGTAGAAGCTGTTTTCAACTGAAGTCTACATACTGACATTCAGCAAAAAG
ACACAGAGAAACAAAGTAGGTAAGTCAGTTTGTATATTTCTTATGAATCC
TATGAATCACAGGCAGTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttgatttgaattgtc
gAGAAGTTCAGTTACCTAGTCGTACCtgtaaaaattatcagattattatt
ctaaattttctaggtaagaatcagaaattcagaaatgggatgcatgggaa
aataatgagaaTATGTGTGGCAGTAATTTGCAGAGAGCACAaccgaaatg
aaatatttggcacagtATCCTGATGGTTTATTATTGAGATTAAGACTTGC
CATCACGACGTCCTATGGTATTATTTGAGAAAATGCCTTGCAACGTCCtg
gtataatttgagattataacttggaatatttcacttcacgtcctggttta
atttgggattataacttggaatatttcacttcacgccCTGGTTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTACTGAAATATGTTATCATGATATGCAatttttcacttgacgtcct
gatataatttgagattatgacttggaaaaatTTACATCAGCCTTCTGGAA
TTAGTCGCGACTGTAATACAGTATTGTCGGAAGACAGTTTAGAATCATTT
TTTATCATGATTGAATTACCTATTTAtcagtttttgtaaataagaaatTT
ATTGTCATTTAAATCTGCCTCAAGCTTTTTACTAATTGGTACTTTTCCAT
TTTAAGCTAATTTCTGGGGATTTCTTAACTTTTCTTCTATTTCATCCTCA
TTTTTTAACGTCTCTTTTTGGGTAGAATCAAAGCAAGATCAACATACTGC
AAAGCTTACaagctggaacttttttactttttccctgcaaaagttatcat
aagatttttcatccactactgtaaatttttttatcaaagaaaacAGGAAA
CATTGTGGTCACACTagagattttaatttttataaaatcgGATAACAATA
GGTAGAAGCAAAATTCTTTTCAGTTACGATCTCAAATCAATTCCGGTCTG
AaaagttttgagttttttcttctcttgctcAAGCCAGACACAAAAGACTT
CattgtttaaattttaaaacattttcgaGGTGCCCCCGAGCTCCTctttt
ctgttttgaattttaaaacaatggaCCTCTCAGAAAAATGCAAAATGCTA
TCTGGTTGATAATCGTTTCCATAAAAGAAGTAGTGTATCATTCATACAGA
ATATAATGGGGTGGGTGTGGTGATATAAATAAACGTGAGAAGATTTCTCA
CACACAAATCATTTCAAAGAAAGCTGTGCACTGTTTCTGTGTGCAAAGTG
TTGAGTTTGTGAAGCGAAGCAAAATGAATTATAACAATTATTGTGGTCCA
GGTTACAAACCTACGTATTATCCTGTACCAAGTCACCTTAACGAAATGCC
ACCaatgcccggggggggtactacccttgtcgaccgacgggggtgctccg
ccgaagttcgaaaaatggaccctacgtgggactcgaaatttgcgaaaaaa
gtgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCTTTTTTCTATG
GGTATTGCTCTGCGTAACTGTGTGTCACGTTTTTCTAATCTTGGCCGAAC
AAGTGCTACTAACGACAGAAAGGTCTCCCGTGACATTCGAAAATCGTTAC
gccaaaaatgattaaaaatctGATCTGCCTGCATACGCGAAAACCAAAAC
TCTTGTCTGGGGTAAGCCCATAACGAACGTGCTCTACGAACTCTTAATTG
TAGCAAAGAAGTACGCATGATGGATGACAAAAAGAATCTTCTAGTTAACG
AGCGATGATGGGATATTGCgtttttgaaacaaattttgctAAAACGTCGT
TTTTTATGCTTCTTTTGATAGTGCTTGAGAAGGAGCAGAAGTAGTGCTTT
TGATTCGGTGTCCATAATGTAAAAGGTCAAAAAGTTTGAATGAGTTTGTT
TATTAATTTCCTGGTAAGAGAAAAACAAACTGAAAACTAATAGAGAAAAG
CACTATTGAGAAGCTCTATTGTTAAAaaccattttaaaatttttaaaatt
tcatagtGTGACTACGATGAAAGTCACAAATTCGAAATTACAAGTATTTA
TAACTGTTTATAAAACTGTCAATGATTTGTATACATATCCTTTGTCTGGT
AGTAATGGTAGTGGGGAGAATATACTATAGCTTTTTATTTACACGGACTT
TAATATATAAAAGGGGTAAACATAAGGATATAatcctcaggcaaaaaaaa
aacaaaaaaaaaaaaacaaacttacatgatttgatgttttttaagaaatt
tataaggtgaaagtttagatagatatccttgttgcaaagaaattactagc
ttattaaaaaatgactgtttataaaaattgttttctaagaaaagaaagtg
TAGTTCCAAGAAACTACAAAGGGAATGAAAGGAAGAGGGTCTCCAAAGAG
AACtataatatttcttggaatcCCTCTTTTATCTCAGTTTCTCTCCcgcc
tctttttttttgttttgattttttcgaataccGAACACAGTTGGCCTCGC
ATACGGAAACTCGAATTCGTACGACTTgggctgtttttgtattttgtacc
aaaatcgtatagtctaagactggcaactctaccgactgtaaactcttttc
ggcaaaaagatccgtttgcgaattttcttcggctttgggcatttttctta
gatagtgattcgtcttacactatagcatagtctacgtGTCACGTAGCTTT
GAACCTTTTCTACATATTTACGTTTAGAAAGTCATGTCCTGTACAAGAGC
TTGCATGCGTCAAGGTATGATAATAGTACACAGTCTCTTTAACTGGAACC
TCTATAACTGGAAGATCTGAATTCGACGTTTTCTCGTTCCTTCAGTTGAC
AATGCCATGCTAGATGCACACGCTGACCCTCCTACTCTAATAAACATTTC
ACCTAACATGTCTCATACCCAGATCCTGCACTTGACAGAAGAGGTTTAGT
TGCTTTACAAGTTTTTTACCCTTAGATTGTTTAGGCCGAAGCTCACATGA
GTCATGCTATCATCtacccccccccaaaaaaaaaaaattctttgcaTTAC
AGTAATACCTATAGATATAAACCCACGGCATACCCTTTGTATACTCTCCG
CGAATTGCTGACTAGGTTTCTGTTTTAATTCTAAATTCCTTGGAGTAAAG
TGATATCTTAATACATTTCACAAGTCTTTATGTTTTGAAAGCCTTAGCCT
ACGCTAATAGATTGAGAAATGTCTTCCTTCGATTACTAGAATTACTAAAT
ATGACCTTTTTCGTCAGCATAAATTACATGAATTGTAATGCTTGTTTAAA
TTGTTTAGATAGGGCTTTATTGAATATCAAATTGAGTAATAAGTTATCTT
TACAGAATTTCCCTCGGATTCGGACGATTCCTCTGAAAACAGAATAGCGT
CTCcgtctgactgaaaccaacacaaCCGGGGCTCATTGGAAGTTCTGAAG
CCGATACCGATTCTCCACAAACCTGCAACTCGACTCCAAGCAAAGGGTTT
TTCTTAGGAGAAGAGCGCGGATTCTAAACTGTTCGAACCAGAACCGGCCT
CTAAATTCATACTGCAATCTTCCGGCGTATTTGTCTCGACAACTTAGTAC
GACAAGAGAAAATTCGAAGGCCTTCAGAAGCCagttgaaatttctgaaag
ttgagtgaacatcaaaatttataatttgttaTTATGGAGCGAAGAAAGAT
TTTTGCATGCTAATACTTTGGGAAGTTGcttttcatatgattatgaagtg
agtgtcttgttatcatttttaatgttcttaagatgttcttattttagcca
tttttaagtatttttgtcaattttcctaagaaattcggtgttttagagtc
cacagagccgtaaaatgttcttaacattttgacgatcgaagccttatgct
cttatatagtttgttcttatcaaaaatgTGTAATGTCAATTTCTGTCAGG
ACGTCTTTGTGTCAAGTAAGTAAAACAAACTCTTTGTCTTTACCACTGGG
AAGATTATAGGACAAGGTTGTACCATTTTCCGAGAACATAACGAATTTCT
TGTTAATGAAAGTCTTCCTAGAACCGCGTCATTTCTTTGTAGTACAGTAC
TTTTTTAGATGTAGCAAGTTCTTCTGCGTTCAGTGTTTTCCTGTTTTGCG
AAGATAGTGAATGTTCAGTTGAGATCTTCTATTTTTCTTGGATGGAAATC
AACAGTGGTTGTTTTTCTCTGTCACACTGTCAACAGTTTGTTTAAGTTTT
TCATCCAACTCGTGCAAATTTTGGCCATATGTTATAGAATTTGTTTTTGA
TGTCGTTGGTTATAGGTTCTTTTTCTTTGTCACACTGTCAACAGTTTGTT
TGAGTTTTCATCTAACTCATGCAATTTTCGGCCGTATATcatagaattta
tttttgatgtcgTTGGTTATAGTTTCCTTTTCTTTGTTACACTGTCAACA
GTTTGTTTGAGTTTTTCATCTAACTCATGCAAATTTTGGTCGTATATCAT
AGAATTTGTTTTTGATGTCGTTGGTTATAGTTTCCTTTTCTTTGTTACAC
TGTCAACAGTTTGTTTGAGTTTTTCATCTAACTCATGCAAATTTTGGTCG
TATATCATAGAATTTGTTTTTGATGTCGTTGGTTATAGTTTCCTTTTCTT
TGTCACACTGTCAACAGTTTGTTTGAGTTTTTCATCTAACTCATGCAAAT
TTTGGTCGTATATCATAGAATTTGTTTTTGATGTCGTTGGTTATAGGTTC
CTTTTCTTTGTTACACTGTCAACAGTTTGTTTGAGTTTTTCATCTAACTC
ATGCAAACTTTGGCCATATATCATAGAATTTGTTTTTGATGTCGTGGGTT
ATAGTTTCCTTTTCTTTGTCACACTGTCAACAGTTTGTTTGAGTTTTTCA
TCTAACTCCCGCAAATTTTGGCCGTATATCATAGAATTTGTTTTTGATGT
CGTTGGTTATAGGTTCCTTTCCTTTGTTACACTGTCAACAGTTTGTTTGA
GATTTTCATCTAACTCATGCAAATTTTGGCCATATATCATAGAATTTGTT
TTTGATGTCGTTGGTTATAGGTTCCTTTCCTTTGTTACACTGTCAACAGT
TTGTTTGAGATTTTCATCTAACTCATGCAAATTTTGGCCATATATCATAG
AATTTGTTTTTGATGTCGTTGGTTATAGGTTCCTTTCCTTTGTTACACTG
TCAACAGTTTGTTTGAGATTTTCATCTAACTCATGCAAATTTTGGCCATA
TATCATAGAATTTGTTTTTGATGTCGTTGGTTATAGGTTCCTTTCCTTTG
TTACACTGTCAACAGTTTGTTTGAGATTTTCATCTAACTCATGCAAATTT
TGGCCATATATCATAGAATTTGTTTTTGATGTCGTTGGTTATAGGTTCCT
TTCCTTTGTTACACTGTCAACAGTTTGTTTGAGATTTTCATCTAACTCAT
GCAAATTTTGGCCATATATCATAGAATTTGTTTTTGATGTCGTTGGTTAT
AGGTTCCTTTCCTTTGTTACACTGTCAACAGTTTGTTTGAGATTTTCATC
TAACTCATGCAAATTTTGGCCATATATCATAGAATTTGTTTTTGATGTCG
TTGGTTATAGGTTCCTTTCCTTTGTTACACTGTCAACAGTTTGTTTGAGA
TTTTCATCTAACTCATGCAAATTTTGGCCATATATCATAGAATTTGTTTT
TGATGTCGTTGGTTATAGGTTCCTTTCCTTTGTTACACTGTCAACAGTTT
GTTTGAGATTTTCATCTAACTCATGCAAATTTTGGCCATATATCATAGAA
TTTGTTTTTGATGTCGTTGGATATAGGTTCCTTTTCTTTGTCACACTGTC
AACAGTTTGTTTGAGTTTTTCATCTAACTCGTGCAAATTTTGGCCATATG
TCATAGAATTTGTTTTTGATGTCGTTGGTTATAGTTTCCTTTTCTTTGTC
ACACTGTCAACAGTTTGTTTGAGTTTTTCATCTAACTCGTGCAAATTTTG
GCCATATGTCATAGAATTCGTTTTTAAAGTCGTTGGTTTTAGGCTCCTTT
TCTTTGTTACACTGTCAACAGTTTGTTTGAGTTTTTCATCTAACTCATGC
AAATTTTGGCCATATATCATagaatttgttttgatgtcGTTGGATATAGG
TTCCTTTTCTTTGTCACACTGTCAACAGTTTGTTTGAGTTTTTCATCTAA
CTCATGCAAATGTTGGCCATATGTCGTAGAATTTGTTTTTGATGTCGTTG
GTTATAGTTTCCTTTTCTTTGTCACACTGTCAACAGTTTGTTTGAGTTTT
TCATCTAACTCACGCAAATTTTGGCCGTATATcatagaatttatttttaa
agtcgTTGGTTTTAGGCTCCTTTTCTTTGTTACACTGTCAACAGTTTGTT
CGAGTTTTTCATCTAACTCATGCAAATTTTGGCCATATATCATAGAATTT
GTTTTTGATGTCGTTGGATATAGGTTCCTTTTCTTTGTCACACTGTCAAC
AGTTTGTTTGAGTTTTTCATCTAACTCATGCAAATTTTGGCCATATGTCA
TAGAATTTGTTTTTGATGTCGTTGGTTAtaggttttttttctttgttacg
CTGTCAACAGTTTGTTTGAGTTTTTCATCTAACTCATGCAAATTTTGGCC
ATATGTCAtagaatttgttttaaaagtcGCTTGGTTTtaggttcttttgt
ttttgaatttgaaagtaTTCTAGTGACTTCAAAAGCATGCAATAGTAAAG
AATAGTTCTACATTAGAAATACCAATTTTCAGGTAACTCTTTTGCTGTCa
agttttttatgttttgtttttgcggtgtttaatgaaaattattttcgtta
ttttggGCACGAATTGCATAGTCCTATAAGTTTTCCCTATGAAGGGTAAA
TTATTCTTTATGATGTACAAACTTTCTTTATCGCTATCTAGAGAATGTAC
CAGAAAAAAGCGGAATGTACCAGTACAAGCTAGGtcagttttaatttcaa
tttatttcGGACATTACATCATCAATAGCCAATCAGGACTCGCAATATGA
TGAAATATTTCATCCCATGGAAACTTTTGTTTACTAAATAAATTTGTGAA
AATCTTAATGTGTATTCACTATATTTACCATAGTAAATAAATTATGCCAC
GTCATAATATTCGATTATAGTTTCATCTCATGATTTCATTGTTTAAAAGT
TCAAAGTCCGCATAAATTAACATATTTAAGTACAACATTTCTCCAAGGAA
CAGTCATAAATTATCGAGACTTGAAAGGAATAAGTTAAATACTAAGAAAG
GAATTATTTCAGAGAACTTTTGTAATCATGGCTAATGAATCTAAACGAGT
AATTGAAAACACAGACACCACCACacaccattatggaaatgaaCATGACT
ATCAAGAAATCTTATTGGATAACATTCAACTTAAACAAACTGTGGACAAC
TTATTGGCGAGATTAAATGCAGCTGAGAAGAGATCCAAGGAGCAATATCA
AGAACTTCAAAAGGAGATTGCTGGATGCTCAAATAAAGTGACTAGTGGTA
CACTTGAGAAGAGCCCAATTCCTGATTTCAACATTTTAACAGAAGCAGTA
GAAAAAAATACAGAGAGTTTTAGTGATTTGGATTTGAAATTCCAACTCCA
TGAGAACTCGGTCAATGACGGGCATCTTGTTTGGAAGATCAACAATTTTC
AACAACGAACGACTGATGCAATTATTGGCAAGACAAGAGCATTGCATTCC
GCTCCTTGCTTCACGAGCAAGTATGGGTACAAGTTTTGCCTAAGGCTGTA
TCTACACGGTGATGGTATGGGTAAAGGAACACACTTGTCACTTTTCTTGG
TTCTTATGAAATCAGAATATGACAACATTTTGGAATGgcctttccaaaag
aaaatcaaattcactTTGATCAATCAAGAGGACAGAAGTAAAGATCATGT
GGAGAAAATGTTTCCAAACAAAGATtcatcaagctttcagaaaccGAAAA
AAGATATGAACATTGCTTCAGGTTGTCCAATGTTTATGAATTTGAACAGA
TTGCAGCCTGAAGGATTTTTAAAGGACGACTCTTTATTTGTCGAGGTtaa
aatagattaaatttttacACCGTTTTGTGATCTCAAGAAATAGTAACTTA
ttaatttaaatattttcataattattatttattattatttttcaaaaatg
aaaagtcGATACACATAAACATTTTACCCTGATTTGTAATTTCGAGAAAT
TGTAATTTATTGATTtagatatattttttataattaatatttattaatat
tttttcaaaattgaaaagtcAATACACCAAACATTTTGCAACATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048019-exon-scaffold_14-1491911889:731377..733368 | TCONS_00048019-exon-scaffold_14-1491911889:731377..733368 | Clytia hemisphaerica | exon |
| TCONS_00048019-exon-scaffold_14-1510915933:731377..733368 | TCONS_00048019-exon-scaffold_14-1510915933:731377..733368 | Clytia hemisphaerica | exon |
| TCONS_00048019-exon-scaffold_14-1575043694:731377..733368 | TCONS_00048019-exon-scaffold_14-1575043694:731377..733368 | Clytia hemisphaerica | exon |
| TCONS_00048019-exon-scaffold_14-1491911889:748721..749271 | TCONS_00048019-exon-scaffold_14-1491911889:748721..749271 | Clytia hemisphaerica | exon |
| TCONS_00048019-exon-scaffold_14-1510915933:748721..749271 | TCONS_00048019-exon-scaffold_14-1510915933:748721..749271 | Clytia hemisphaerica | exon |
| TCONS_00048019-exon-scaffold_14-1575043694:748721..749271 | TCONS_00048019-exon-scaffold_14-1575043694:748721..749271 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:731377..749271 + |
Blast
BLAST of TCONS_00048019 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 6.218e-49 Identity = 80/164 (48.78%), Postives = 123/164 (75.00%), Query Frame = 2
Query: 1817 LADLDLKFQLHENSVNDGHLVWKINNFQQRTTDAIIGKTRALHSAPCFTSKYGYKFCLRLYLHGDGMGKGTHLSLFLVLMKSEYDNILEWPFQKKIKFTLINQEDRSKDHVEKMF-PNKDSSSFQKPKKDMNIASGCPMFMNLNRLQPEGFLKDDSLFVEVKID 2305
LAD+DL+FQ+ E + +G L+WKI ++++R +A++GKT +L+S P +T +GYK C R+YL+GDGMGKGTHLSLF V+M+ EYD +L WPF++K+ L++Q S+ H+ F P+ +SSSF+KP +MNIASGCP+F+ L+ ++KDD++F++V +D
Sbjct: 399 LADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQ-GSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVD 561
The following BLAST results are available for this feature:
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