TCONS_00047998 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047998
Unique NameTCONS_00047998
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3321

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047998 ID=TCONS_00047998|Name=TCONS_00047998|organism=Clytia hemisphaerica|type=transcript|length=3321bp
CTCAGTCTCTTGGTGGATTTCCATCAATGGGTGGTGGCGGCCTTGGAGGC
GGCGGTGGCGGAGCAGCAGGCGgCGGCGGAGGTGGTGCtgctggtggtgg
tggtggatcctctggtggtggtggtggtggtgATAGTGGAGGAGGAGGCG
GAGGAGGCGGTTCAAGTGGCGGAGGTGGTGGTGGTGATTCAAGCGGAGGT
GGAGGCGGCGGCGGTGGAGGTGGCGGTAACCTTCAGCCCGCCCTCCTCAA
AATGTTAACCGGAACCTGCCGTGGACTTGAATGCATGAATCGTGCAATGC
CTTACATCGCACCCGCACAAGTCGCCCCAAGTACGCCCTTTGCCGCCCTT
ATGCAAAGCACGCTGAATACCATGGGGCCAAAGAACGCTGCGACTTTCAT
GAACGGTCTTGCAGAAGGAATGAGTAAAGTAACAAATCAATATTTATCGA
AGGTTGAATCAAGTGGAGGATTTAAACCACCGCAGGTACCAGTTATTGGA
AGTGGTGGGGCGGATGGCGCAGCGGCTGGTGGAGCCAGAGAAGGTATTGG
TGGTACTGGCGCCCCTGCATCCGGCCCTGCACGTGGTGGTGGCCTCAAAA
GGTCCAAAATACCAAagagaattttaaaatcaaacttatttaaatcaaaa
tcaatgaaaaattcaaaacgtgGTAAAGTTTTTCAAATCGAACGTAGCGA
ActtgaaaagattttgaaaaatgcacaaCTTCAAGATAGCGGGCCGCTAA
AACGTGATTCAAGTCAACAGCAACGACCACAAACAGTAAAATCTACGGGC
CGTCAACAGATTGGACCGTTACCTGGAGCAGAGACCCTCACATCACAGCA
AGCCGGGAGTAAACTTAAAGCATTGGAAAAAAGCGCAAAAGGAAAACTCA
AAGAGAAACAAGGTTCATTACAACAAAACATCTTGAACAGTATTTTAGCA
TCCAAAGCACAGAGCATCAAGTTCGGGAATGGATTGAAGCCAAGTAAGAC
AATTTAAGATCAACCTGGAGTGACACGTGAGGTCTATTGGGAGGTGGATG
ATATTATGGATGGGTACGTTGAAGGAGTTtacaaaaattggaaatttcct
TCAAAACCAGATCAACGCGATGTTTTATACAATTTTGATTCCACAACTAT
GTTGGCGGAAGATTTTGGTCAACGCATATATGGGTGGTTTTTGCCGCCCC
TGACGGGCGGATATATCTTTTACACTTCATGTGATGACGCTTGCGATTTG
TTTTTGAGTCCAAACGAGAATCCAATGACGAAATTAAAGTTGATCTCACA
GAGGGAGTGGTCTGAACATAATCAGTTTGACAAATATCCACTCCAACAAT
CATCAACTCTCATTACACTCCAAGCTGGTCGTTCATACTATATcgaaatt
gtttcatcaaatgCTGATGGACCTAACCATGCATCAGTGGGATGCCAATT
CCCGAACGGACTCGTCGTTCGCCCGATTCCGGGTGAATTCTTAAATCGGT
TACCATTTTCAGCGTCTGGTACCAGCCGCGCGGTTCAAAACCCTGCCACC
ATATTGGGCACCTATCAAAACGCAGAGGTCTTAACAACGAGCCAAGGAGG
TGGGGCAGTAGGGGCTTTCCCTACAAATGTTCCTGAAGACGACGGCGGGA
CATTTGGACTAGGTACTCTTGGTACTATCAATCCGTCTGATTCGACTGTC
AATANCTACCAAAATGCAGAGGTCTTAACAACAAGCCAAGGAGGTGGGGC
AGCAGGGGCCTTTCCTACAAATGTTCCTGAAGACGATGGCGGGACATTTG
GACTAGGTACTCTTGGTACTATCAACCCGTCTGATTCGACTGTCAATAAA
GCACCCCTTGGGAGTGTCTTTGATACAAAACTAGCAGCCAAACTATCTGG
TACCACCGTCAAGCAGAAAATATCCCAAACAGTGGCGGCTGGTATAGCAG
CTGGAATTATGTCGGGTGGAAACGCCCTTCTTGCTAACATTGAAAGCGAC
ATCAAGAAATCCGTCAAACCAATCTCGCCCTCGGGCGTTACTGCTCTCAA
GGCAACCACTCTATCTTCGGACGCCCTTGCTGGTGCAGGTGTTAGTGAAC
CCGGAGCACCTGGTGGACCAGGGGGCCCAGGAGGGCCTGGAGGTCCCGGA
GGACCCGGTGGACCTGGTGGACCTGGTGGCCCAGGAGGGCCTGGAGGACC
AGGTGGCCCTGGAGGACCTGGTGGCCCTGGTGGACCATCTGGTATGCAAC
AGATTGAGCCGTTAGTGCATTTCGTGGCTGAACTAGAGCACGAACACGAA
CATATTCACGGTCACGATGCAGAATgggaaaatcataattttcatcaTCT
CCACGAAGATGACGGTGGCAATTTCCATGAAATCGAAGATGGCCCTGGGA
TTGGCGAATCCTTGAACAGTCATTTTGCTTCTGGAAACAGAGGTCGGTTT
AACGGACAAGGAATGACAAGCCaagtgacgtcatcacaaattTTTGGACA
CCAAGCTGGACACTTTGGAGGATCATCAGGACattcagaaaaatttcatc
atttcgGACATGGCAATGATCGTTTCGGACATGGATATCATCCTGTATTG
GTTCCAGCTCATACATTAAGTTTGGCTGATACTGGATCAATTTCACCTAA
TCCTGAAACAGCGACAACAATGCCTTTACATCCAGCTCATGAGATGCTTA
GTAACCTAATGCGTTATGAACAAACGGAGCCGAACCTGAAATACCACCCT
GACCGATTGGGCACAATGATTGGAATCGATGGTAGGCATAATTCGGGTGT
AGTCATAGAACGCCCTGGAGAAACGCCCTGCTGTGGTGGTGAAGGTGTCA
GGATGGGTGGGTGTAATTGCGAAGGTAGTGCTCATGATAAACAGAAGATT
CCAACGCCCGTTCAAGTGTTGGATCCTCATGAAAGCAGCTTGACGTCACA
TCCAGTGAAAGAAGATTCGAAAACAGAAAACGGGGAATCNTTTGACGTCA
CATCCAAAAAAAGAAGATTCGAAAACAGAAAACGGGGAATCAAGATCTCT
TAAAAAAGATGAATTCTCCAACTTCAaagaaacttcaaaactttcaaaaa
tggtGGATACAGATAACCCGAAAACTCAGAATCGGGAAAACCAAGAATTC
GAGAAATCGTCAAATCCTAGCAATGAaataaggcaccatttacatcACCA
TCATTTACACCATTCCAAGCAGCTTGAAAATGATAAGAAAATGTTGGGTT
cgatttttaaagatatttcacCCGACAAAAGAACTTTGCACCTTAACAAT
CTTACAAGCAAACCATATAAT
Run BLAST on NCBI

transcript from alignment at scaffold_14:358930..371872+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047998 ID=TCONS_00047998|Name=TCONS_00047998|organism=Clytia hemisphaerica|type=transcript|length=12943bp|location=Sequence derived from alignment at scaffold_14:358930..371872+ (Clytia hemisphaerica)
CTCAGTCTCTTGGTGGATTTCCATCAATGGGTGGTGGCGGCCTTGGAGGC
GGCGGTGGCGGAGCAGCAGGCGGTAAGTTTTCTTTTGCACACGGACAGGG
CCCATAGCTTGTAATATTCTCTTTTGCGATTATGACTATAACTTTtaact
agccataattttcattaaagtgccaccgcagaagaacgatcaaataagtt
gttgaatttggaaagaaatgttactgatagccgttacttctgttagaatg
gcatctcatctgaagcaaaatttagtctacaaatattagcaagttatgtg
tccatctcatagatatcttcttatagagataagataaagttatttatctg
ttttttttgttatctcttttattaccaaaataatggtatacAATGGCTtg
tttataataataataatatatacCTTCCTATAATATAGGACTAGGCCTCA
GTGAAGCTGAGGATCACAGCACAATGGCTTGTTTAtatcatactaaacgc
tactgtactaaACTGCCTTTTTAATGTAATAGTCACacgacaagtttttg
aaaagatacaaatttctaatttgcgttgctcagagcggttaataactact
tgtggtttaaatagggaatttcgcaacaaaaaaggaatttcccttaattc
gactccctgaggtaataaaaaaagacatatagagctttgaaaatgggtaa
tcagatcaaaacaaatccgGAAAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNatttttaatgatgataaaacaatagaNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaacgcgcgca
aaattatgagatgtttgcccaacttccttatgcgtgaagctatgaatgcc
atcctcggaagctttaggcttcctgcggtggcaataagGGTGCGTTCAAC
CTCGTTTTCTGCGTATTATCAACTTTTTGGTGCTTACTGATAGCactaga
taatattctctggcgtcaatcagtaacgtaaataaagcctgggatacatg
gggacgaggttgcgGTTATGACTATAACTTTTAATAAAGGTGCGTTAGAC
TAAATGATTACTGCAGCTTGAATATTTTCTCCCTCTAAGCTTTGAAGGGT
ATTTTCACTGTTTTCAGAGAATATCTTTtacagatttgaaaaaaatgtgt
caCTGATAGCATTTGGTATATTTTAAATacgtttgattttttttttgatt
aggCGGCGGAGGTGGTGCtgctggtggtggtggtggatcctctggtggtg
gtggtggtggtggaggtagattttatttttgtgtttctttctttttttaa
cgaTTTATTGTATCGACTTTTCTCGGTACCAGTTTTCTATGAAATATTAG
GCCACTAGCTTATTTCGTAGGATTCGTGTTTTGAGTACATGATATCTTTC
TACGTCATTGCAATATAATCAACTTTTTATGGTTGAGTACTCCACGGTCA
GGCGTGTgctactttattatttaatttaccaccctaaactcgatccaatc
cttttttatacttttttatcgtcctttggtgcgaaaaaagactggggtgg
ttttagggtggtaaaacagtttgaaaaaatgaccgcatggcaattggcgg
ctacggtcgaaaaggcgtATTGAGATTATAAGTTTGACAAAGACAACaac
aatagaaaatatttcttgaattcccaagttaattaaatattgacaaaaag
tcaatttttttgcaatGTATTTCGTGAAGGGAAATCGACACACATTTGTG
CTTTTTTCCCATTTAAATCGAATAGAAAAAAgcatgtactcttaggtgcc
aaataaataGAGGGTTCGAATAAACGCGGGTGGGggattttcgagatttt
aataaacggtgggacctaattgccgggggttggaaattgtacttctgaaa
agtgaaaacccaaaaaataaggtaaatataggctaaaatcagactattta
gagaaaaataaggggtcttctctttgacagctgaaaatattcttaaaatt
ggGTGGGGggtgtttatttggcacctaagagtaacagATGAACGAACCCT
ATGAAATTAATTAATAAAGGAATGGTTTAAAGAAGAAATTCGACATAAAG
ATTTAGGgaaaggttggaaatttttgtttctcgAGTAACCATAAATCTCg
gatttaatttttcaggtgATAGTGGAGGAGGAGGCGGAGGAGGCGGTTCA
AGTGGCGGAGGTATTTTTCATCacgttttttataggaacatccaaaattt
ttgaagtcatcagatgttcttaatttttcgggtttcaagcctaataatgt
tcttaacatgttcttattttgagtatttttgtccattttcctaagaaaac
aggtgttttagagcccacgaagccttaaaatgttcttaacctatAGTATG
TTGTTATGAAACAATCTACGAAGAATCGACTGCATACTGAATAAtccatt
tttttatttgtagGTGGTGGTGGTGATTCAAGCGGAGGTGGAGGCGGCGG
CGGTGGAGGTGGCGGTAACCTTCAGCCCGCCCTCCTCAAAATGTTAACCG
GAACCTGCCGTGGACTTGAATGCATGAATCGTGCAATGCCTTACATCGCA
CCCGCACAAGTCGCCCCAAGTACGCCCTTTGCCGCCCTTATGCAAAGCAC
GCTGAATACCATGGGGCCAAAGAACGCTGCGACTTTCATGAACGGTCTTG
CAGAAGGAATGAGTAAAGTAACAAATCAATATTTATCGAAGGTTGAATCA
AGTGGAGGATTTAAACCACCGCAGGTAATTTTGCTACTTCAAGCTTGTAT
GAAAGGATGGTGAAGGGGGATGGTAGCTAGCACCTCATTAAAAACCGGGA
TATTTAaactcgtttcttagtgagttccactttgacgatatttgaataat
agaaacctttcaagtgttttgacgcaaacgCAAtatttttgctactgcag
gaacTTCGAAactttaaagtgacgtcaaaaaatcgaatatttagagcccg
aaaacccgggctccaaacattcgaaaaagtcgcaaagtggaatagacgtt
aattgcgtagaaaaaacacgggtgacgtctagtataggctagggGGGGAT
ggtaaatcacaaaaaaaatcttgtACACAACCTTCAAATCTCTTGGTATG
GTATAAAAATCGAGACAATATCAATCTCCGAAGTCTATAACTTCAGTCAC
TTATTATTCAGCGCGCGATAAACGTTACAACCAAGTGATTATTAGAGAGG
CTGGAAAAGCAACTTTTAAAAAAAGAGGatattaatctttttttttttaa
taagagtcTTTGGGGCCGCCATGAAAGTTGTCCTTTGTGGACAAACCCTG
TTGTACTACCCCTGCAAATTGAATGGAAAATACCATGTAACAAATCCACG
AATTCTTTTAgatcggattaactttcgcaaGATTAGATTTCGCGATTTCG
CAAATTTTcgtcattttcgcgaaattaaaactcgcgaaaactCGTATCAA
ACCTTCATTACAATACAATTTACTGTGTCACTGTTTAGGTACCAGTTATT
GGAAGTGGTGGGGCGGATGGCGCAGCGGCTGGTGGAGCCAGAGAAGGTAT
TGGTGGTACTGGCGCCCCTGCATCCGGCCCTGCACGTGGTGGTGGCCTCA
AAAGGTCCAAAATACCAAagagaattttaaaatcaaacttatttaaatca
aaatcaatgaaaaattcaaaacgtgGTAAAGTTTTTCAAATCGAACGTAG
CGAActtgaaaagattttgaaaaatgcacaaCTTCAAGATAGCGGGCCGC
TAAAACGTGATTCAAGTCAACAGCAACGACCACAAACAGTAAAATCTACG
GGCCGTCAACAGATTGGACCGTTACCTGGAGCAGAGACCCTCACATCACA
GCAAGCCGGGAGTAAACTTAAAGCATTGGAAAAAAGCGCAAAAGGAAAAC
TCAAAGGTAGAGCTTTTTGTTTAGTTAGTTCaaatcatagatttataaag
cccgaagggctagatggagtgctttaagctcttccaagcgaaaaaaaagt
gaatattgcaaaaaatattgctgctattgttttcgaaaacccgtgaaact
tctgattggtcaagcgctaaaattctattgtaatgtcacctcggcacact
tttcagcaaaagcacgatatctagcccttcgggctttataaatctatggt
tcaAATACcttaaaaggttttgttttttaataagagtgatatcgtttgct
tactcgtcaattttctttcacaagctttttcacattggattacggatgtg
gagcaagtttggtcagaaagaggaaaataaaaagattttttgcttatatc
aacaCAATATAACAAGACACTGTACacatatgaaatatgtgtctgatatg
aaatgcggtaacacttatgtaaaaataaaacatttaaaacggAAAATTTG
ACTAATAAAGTCTAAGTTGGAGGAAATTTTCCTACGGTAAAACTTCGTCA
TTTTTGTGAAAACCTTTGTTGCAACTCCCTTGAAGTTGACcagaattttg
tttttgttggagAAAACTTACCTTAAAAATGTCGCCACTCTTCCCCTTGA
CTAATATTTTCCCCTTAGAGGGAAtaaatttatgattttatgaCAATTTA
AGCTTGCTTTTATTCTCCTATCACtttcaatcaaatttaaaataattccT
CAGATTCgccaaaaatactttcctaaGATACAGTATTgtcaactctctct
ctaattcgatcctcattctgtaattcgaatataAAAGCACTTTCACACCT
GAAAAGTCACCTAAAATGCTCtccgtaattcgaatctttctctaatcgAA
GAAAAATTTTAGTCTCACaaaagtcgaattagagagagagtctAGAACTC
ACAACCATGAGAATTTTAActctaacatttttttttaaatgattttcatT
CCCTGAACTTTCCCTGAGCAACTTTTTGAGCTTCTAAGAAATCGGATACT
TTATAGAACCCAAAATGTGCTTAgctttttcttaacatttttgtccATCA
CGAAtgtgttcttatgtagtttgttcttatttcttCTAGAGAAACAAAGT
TCATTACAATAAAACATCTTGAACAGTATTTTAGCATCTAAAGCACTTTG
AGGTCTCTTGGGAGGTTTTCGATATCACAAAACTCCGATCTCAACTGAGC
TCCAATTTTATGTCAATGCCTTTAGACACTCAAAAGTAGGCTACTGTAAC
CTAACTTTTTGCTTGCTttttatgtagtttgttcttatttcttTTAGAGA
AACAAGGTTCATTACAACAAAACATCTTGAACAGTATTTTAGCATCCAAA
GCACAGAGCATCAAGTTCGGGAATGGATTGAAGCCAAGTAAGACAATTTA
AGGTTTGTTtgatttcttagtttttagtatattttactTTTTCCGTAATC
CCCCGATTTATCTCTGAGACACTTCACATGTCCCCCTCCCCACTGTCACC
ATTCTCGGCCATTTCCGGACTCAACACTGAGGTCCGGGGGACGGNGCCCC
CTTCCCTCACTGTCACCATTCTCGGCCATTTCCGGACTCAACACTGAGGT
TGAGCTCCGATTTGATGCTACAGTCTTAAAACCCTTTAAAAGTAGGCTAC
TGGAATCTAGCTTTTAGTTTGCTTTAACGAGACCTTTCTGGTGTAGTGGA
AGCAGACTAAAACTTGATATCTCGACTAAACTTCAATCTAATGTTATAGC
CTTTAGACCCTTAAAAGAAGGTTAATGTAACCTAACTTTTTGCTTGCTTT
TTACAGATCAACCTGGAGTGACACGTGAGGTCTATTGGGAGGTGGATGAT
ATTATGGATGGGTACGTTGAAGGAGTTtacaaaaattggaaatttcctTC
AAAACCAGATCAACGCGATGTTTTATACAATTTTGATTCCACAACTATGT
TGGCGGAAGATTTTGGTCAACGCATATATGGGTGGTTTTTGCCGCCCCTG
ACGGGCGGATATATCTTTTACACTTCATGTGATGACGCTTGCGATTTGTT
TTTGAGTCCAAACGAGAATCCAATGACGAAATTAAAGTTGATCTCACAGA
GGGAGTGGTCTGAACATAATCAGTTTGACAAGTAAGTTactttgaaaata
gaatatagAGAAAATTAAGGAGTTCACTATCTCAAATTTTTCCTCTATCT
ACGAGAGGGAATAACAAGTGTAGTTTTagcaaacaaaattttatcTCAAG
TGGAAACCGACCTTAACGATCTAACTTTTATTGATTCTTaaacaaaaaaa
cgaaaataaataaattttctccGAGATTAAATTCACGGATCAGCCTATAC
GTGAATTCTAAGATTTCGCTGGAACTTATTTTTGCGGGTGGTGGTTTTAA
ATATTTCGTGGGTAATTATTTTTGcggatttcttttttaaataaaccACC
AAGTTGCTGAGGGTTGCACCTTGAGAAAGAGACCAATCTTTCAAATATTT
CGTTAagactttctttaaaaaaacatcCCTCTGGACTTATCCACAAAATC
CGTGAAATTTAACCAGGGCGAAAACTTATGCCATAAAAGTAAGATAAATT
TATTTTGTCGTTCGATTTTGTTAAAGAGTCAATAAAAATTGGATGGatag
ttaaaggttttgtttttaaataagagtgatttcgtttgcttactcatcaa
ttttaattcacaagctttaaCATaagattgacacggatgtggagcaagat
tgctcaaaaagaggaaaagaaaaacatttttttgcttatatcagcataat
ataacgataggaagacactgtcctgttATGAAATaggtgtctgatatgaa
acgggaacacttatgtaaaaataaaacctttaatgggcttttccagaaat
tttctgtAACCACCGTTTGTTGAGAATATACATTTTTCGGGTTCAACAAC
CCCCTGGATAGCTAAAAAGAAAAGACCCCCAGATATCCTGCCTGAAAAAT
ATTATCCCCTGGATGCCCGATTTGATAGGATATCCATGCATTTTATCTTT
TATCCTGTACCCCTGATATCCAGGTATTTTGTCTTGTGCCCCGTGCTGGA
TATCCTCTCCCTCTTATGGTCCAACCTCCTGGATAACATTGGAACCCTGG
ATGTCTGATATCCTCAAAAGGGGGAGCCATggactttttctggaaaagcc
taagctctagtttagacggcccacttttcgccctgcctattctaattgtg
aattaaagttggcATAAAGTAGGCTcagtctaaagtcaatgcatagccct
cttttgacgttaatgcaatgtcttcttttaaCCTTTAccaagattttaac
tgccaactttttacccactttctgcctactctaacaattagaataggcag
gcagaaagtcggccgtctaaactagagctaacaGGTTGTGTAAACATAAC
ACAACGTACACATAAAGACGACTTTCATGCTCTAATCTTTCTTTAGATAT
CCACTCCAACAATCATCAACTCTCATTACACTCCAAGCTGGTCGTTCATA
CTATATcgaaattgtttcatcaaatgCTGATGGACCTAACCATGCATCAG
TGGGATGCCAATTCCCGAACGGACTCGTCGTTCGCCCGATTCCGGGTGAA
TTCTTAAATCGGTTACCATTTTCAGCGTCTGGTACCAGCCGCGCGGTTCA
AAACCCTGCCACCATATTGGGCACCTATCAAAACGCAGAGGTCTTAACAA
CGAGCCAAGGAGGTGGGGCAGTAGGGGCTTTCCCTACAAATGTTCCTGAA
GACGACGGCGGGACATTTGGACTAGGTACTCTTGGTACTATCAATCCGTC
TGATTCGACTGTCAATANCTACCAAAATGCAGAGGTCTTAACAACAAGCC
AAGGAGGTGGGGCAGCAGGGGCCTTTCCTACAAATGTTCCTGAAGACGAT
GGCGGGACATTTGGACTAGGTACTCTTGGTACTATCAACCCGTCTGATTC
GACTGTCAATAAAGCACCCCTTGGGAGTGTCTTTGATACAAAACTAGCAG
GTAATATTCCACATTTATTTCCCTATTAAGTTTGAAAGacttacaaaaaa
tattttgtattttcaaatttggtCCATTTCTATAGTTAAACTTGTTAAGG
TTGCTGAGAAaccaaaattaaattcattcaaaatttccaaaattcgtCTT
TATACGAATCAAATATGTTAATAAACGGCTGTTTGGTAAAAGCAGTTAAG
TATTACCCAAAAATATTTGACATAATGATAAGTTTAAAGACGCCAATAGA
AATTTACTCATGCTTTTCGCAGGCTAATGACACACAGATCAATTATTAAT
ATCAATTTCCCGATTATTATAACATCGCAAGCGTCCGTACTGTTATGCCG
TTAGCGTTAGTGACCATTTTATGTTTAGTTAATCAAGATAACTAGAACTT
TGGCTCCAGTGAGCCTTTTCGAAGAAAAACTGAATTGGCGACGAAGAGAA
TTTTCCATTATTTGCACCTTCTAAATATACTATAAAACACTATCTTATTG
GGTAGAAAGAGGTTTTCGACTTTAAAAAATCAGTCAGCAAGAAGTGAGTC
CATCTGCCCAACAACTCCCCTCCCCTGTGACGAGACCAACATACTGTTTG
AATCAGTAATAAATCATTGTTTAATTTACTTTCAGCCAAACTATCTGGTA
CCACCGTCAAGCAGAAAATATCCCAAACAGTGGCGGCTGGTATAGCAGCT
GGAATTATGTCGGGTGGAAACGCCCTTCTTGCTAACATTGAAAGCGACAT
CAAGAAATCCGTCAAACCAATCTCGCCCTCGGGCGTTACTGCTCTCAAGG
CAACCACTCTATCTTCGGACGCCCTTGCTGGTGCAGGTGTTAGTGAACCC
GGAGCACCTGGTGGACCAGGGGGCCCAGGAGGGCCTGGAGGTCCCGGAGG
ACCCGGTGGACCTGGTGGACCTGGTGGCCCAGGAGGGCCTGGAGGACCAG
GTAAGAAACCTTTTCGTTACGTCTATTACTGTTTCACCAAATGAAGTATa
gccccgaagggctagaaatgaatttccttggtaggatttgaagccaataa
atcctaccaaagttgcgcagcCTAGCGCGCACCgcctcccagctggcaca
caacgtcgctTCAACGTTCttctaatattcacaacgtccatataacgtta
gatgaacgttgaaacatataacgttagatgagcgttgaaacaatgttgcg
TGTCAGCTGGGCAAGTTTTTGCACAAATgtcaaattgaaactaaaaaaat
atcactcgaaaacaaaggaatcgctagatttaatccgtcgtcaaaaatac
gttgcatattttaaggcttcactttttcttgcctgagaacgGCTAAATAT
TCgcttctagcctttcgggcttatacttcattggtttcACCGCCGATGAC
CTATTGCCATAATGACTGTTATAAAATAATTGCATACCTTTTATTCTAAG
AAACTTGCACTGTAGTAAAAATGGAGATTCTATAAAAGTGGATAAAATCA
ATTAGAAAACATTTTAGGAATAGaatgagaaaaagattttggtatacagt
atgtggcccccaaaacggcgatcaaatttgaaatttctctcaaatctaga
ggaaaagagattttacaaaaatttttgctgcatgaaaacaNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNcaaaagcttaactgaaactgaaaatatt
aagctttaaagatatttttctcctatattttgcaaaaaaatgacagaatt
tgccgtttttgttGATTCAGTGAaagattttatatataatgttaattttt
tgttataaactattaattcaaggtgataggaatagaattccaagattttt
tgctttttctcatatttagaattttcggttttatcaatgctgattctagg
gctccaaaatactggttgaccttcacgatgctatatcttttacccagcct
ctaaagtcacagatgtatttccattttctgaacggcattaggtgtagaaa
gtttcctataccccgttttcataccTTATTTTCTTATCCAAGGAGCTTGA
GTGAGTTGTATgcaatttttatataattttggtgttaaaatatttccttt
agacgcaaatatgttattttaaatctgtctcaaaccagcaaaaacatgct
catttttaagtataaccaccattctttcaaaataaacaaaaatcgtttaa
ttctgataaatctacaagtcagaatcttcattttaatgaaaacctccgtt
ttgggggtNacaaaaatcgtttaattctgataaatctacaagtcagactC
TTcgttttaatgaaaacctccgttttgggggccgtctccgttttgggggc
catatactgtaggtgaaaataaaaaataattgtaggcgaaaataaaaaaa
tgtagtgtttccggaatgcgggtcaaggaaaaaagctctcatgcgcgGCC
GGccgataaaaaactttttttgctatttttgataactatagataattgaa
atagaactttaaagataacttttacgTACAAACAGTAAGAAGAAATCACT
GAATACTattgtatcaactactaacaaaGTCTGCAGCCgggtcagaattt
tttttttttttttcatccggccggtttccggaaagctgcatttttttatt
ttcgccttattaTAAATATTTGTCCTTTCTTAAGATAAGGTGTATATGAT
TCTGATTTTGGTCTCCCGTGATTTGGTTCTCCTGATTATCAGAAATATAA
TGTCAATAATTTCGCCTTTTTCAGGTGGCCCTGGAGGACCTGGTGGCCCT
GGTGGACCATCTGGTATGCAACAGATTGAGCCGTTAGTGCATTTCGTGGC
TGAACTAGAGCACGAACACGAACATATTCACGGTCACGATGCAGAATggg
aaaatcataattttcatcaTCTCCACGAAGATGACGGTGGCAATTTCCAT
GAAATCGAAGATGGCCCTGGGATTGGCGAATCCTTGAACAGTCATTTTGC
TTCTGGAAACAGAGGTCGGTTTAACGGACAAGGAATGACAAGCCaagtga
cgtcatcacaaattTTTGGACACCAAGCTGGACACTTTGGAGGATCATCA
GGACattcagaaaaatttcatcatttcgGACATGGCAATGATCGTTTCGG
ACATGGATATCATCCTGTATTGGTTCCAGCTCATACATTAAGTTTGGCTG
ATACTGGATCAATTTCACCTAATCCTGAAACAGCGACAACAATGCCTTTA
CATCCAGCTCATGAGATGCTTAGTAACCTAATGCGTTATGAACAAACGGA
GCCGAACCTGAAATACCACCCTGACCGATTGGGCACAATGATTGGAATCG
ATGGTAGGCATAATTCGGGTGTAGTCATAGAACGCCCTGGAGAAACGCCC
TGCTGTGGTGGTGAAGGTGTCAGGATGGGTGGGTGTAATTGCGAAGGTAG
TGCTCATGATAAACAGAAGATTCCAACGCCCGTTCAAGTGTTGGATCCTC
ATGAAAGCAGCTTGACGTCACATCCAGTGAAAGAAGATTCGAAAACAGAA
AACGGGGAATCNTTTGACGTCACATCCAAAAAAAGAAGATTCGAAAACAG
AAAACGGGGAATCAAGATCTCTTAAAAAAGATGAATTCTCCAACTTCAaa
gaaacttcaaaactttcaaaaatggtGGATACAGATAACCCGAAAACTCA
GAATCGGGAAAACCAAGAATTCGAGAAATCGTCAAATCCTAGCAATGAaa
taaggcaccatttacatcACCATCATTTACACCATTCCAAGCAGCTTGAA
AATGATAAGAAAATGTTGGGTTcgatttttaaagatatttcacCCGACAA
AAGAACTTTGCACCTTAACAATCTTACAAGCAAACCATATAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030544XLOC_030544Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047998-exon-scaffold_14-1491911889:358930..359001TCONS_00047998-exon-scaffold_14-1491911889:358930..359001Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:358930..359001TCONS_00047998-exon-scaffold_14-1510915933:358930..359001Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:358930..359001TCONS_00047998-exon-scaffold_14-1575043694:358930..359001Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:360332..360388TCONS_00047998-exon-scaffold_14-1491911889:360332..360388Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:360332..360388TCONS_00047998-exon-scaffold_14-1510915933:360332..360388Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:360332..360388TCONS_00047998-exon-scaffold_14-1575043694:360332..360388Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:361295..361339TCONS_00047998-exon-scaffold_14-1491911889:361295..361339Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:361295..361339TCONS_00047998-exon-scaffold_14-1510915933:361295..361339Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:361295..361339TCONS_00047998-exon-scaffold_14-1575043694:361295..361339Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:361593..361903TCONS_00047998-exon-scaffold_14-1491911889:361593..361903Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:361593..361903TCONS_00047998-exon-scaffold_14-1510915933:361593..361903Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:361593..361903TCONS_00047998-exon-scaffold_14-1575043694:361593..361903Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:362668..363085TCONS_00047998-exon-scaffold_14-1491911889:362668..363085Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:362668..363085TCONS_00047998-exon-scaffold_14-1510915933:362668..363085Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:362668..363085TCONS_00047998-exon-scaffold_14-1575043694:362668..363085Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:364427..364531TCONS_00047998-exon-scaffold_14-1491911889:364427..364531Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:364427..364531TCONS_00047998-exon-scaffold_14-1510915933:364427..364531Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:364427..364531TCONS_00047998-exon-scaffold_14-1575043694:364427..364531Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:364936..365260TCONS_00047998-exon-scaffold_14-1491911889:364936..365260Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:364936..365260TCONS_00047998-exon-scaffold_14-1510915933:364936..365260Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:364936..365260TCONS_00047998-exon-scaffold_14-1575043694:364936..365260Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:366626..367179TCONS_00047998-exon-scaffold_14-1491911889:366626..367179Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:366626..367179TCONS_00047998-exon-scaffold_14-1510915933:366626..367179Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:366626..367179TCONS_00047998-exon-scaffold_14-1575043694:366626..367179Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:367815..368129TCONS_00047998-exon-scaffold_14-1491911889:367815..368129Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:367815..368129TCONS_00047998-exon-scaffold_14-1510915933:367815..368129Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:367815..368129TCONS_00047998-exon-scaffold_14-1575043694:367815..368129Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1491911889:370754..371872TCONS_00047998-exon-scaffold_14-1491911889:370754..371872Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1510915933:370754..371872TCONS_00047998-exon-scaffold_14-1510915933:370754..371872Clytia hemisphaericaexon
TCONS_00047998-exon-scaffold_14-1575043694:370754..371872TCONS_00047998-exon-scaffold_14-1575043694:370754..371872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:358930..371872 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0456012	0.0333513	0	0.0126285	0.122992	0.0364461	1.89709	1.94178	0.260042	0.618713	0.777527	0.144073	1.25662	1.48905	1.0338	2.92493	1.29352	1.28881	0.206019	0.164859	1.10512	0.747063	0.637298	0.46282	2.06473	1.82626	0.276625	0.16683	0.0081564	0.0257837
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047998 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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