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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047969 ID=TCONS_00047969|Name=TCONS_00047969|organism=Clytia hemisphaerica|type=transcript|length=1049bp
gatttaaatccagttttgacccctaaactaccattgtgcaaagtttcatg
cttttacgcCCTTGTGCACAATGTTTATGACTTTTGGCACATTTAGACTG
CACTATTGTGCAAATCTTTATGGTCATAGGTCgtcagatcaggttttatg
actttattgtgaaacatgacgtaaaacccagctaaaatcacCTTAAACTC
AACATTTttaagtgctgataacttctgaaacatttatgaaatcgttttca
aattttgactagTGATATAGGCATTGACAATATGAATTTAGAATactaaa
aaaaaactgaaaacgatgaggtcatcatttatgacgtcatagcaTGAATT
TTAAGAACAAATCCTAATGGAAACAGCTAAAActgttaaagaacaacatt
ttgaatttcagaatcttcaaacagaatttaAAAGTCTTTATTGGTTTGAC
TGTgaaagacatttttgtaaaccattaTATTACTTACTGGGAATACTTGG
AAGTGCTTTTGATGGTCTCCCATCTAGGTGAGCAATCTAATGTCCGCCTA
CATGTTGTTGATTTGGTGTTTAATTGAGTTGTATGCAGCATTGGAAGAGA
GGCAAGGAACTTGTCTAACTTTATTTTGAAGGTTAACAAAGGGCATCCAC
TTAAATTCCTCAATTCTTTTGGGAGGGAGTTGAACAAGATGGGCCTACGG
GTAGACAAGAAATTTTATCAGATAGTCTGTAAGGCAGCTGATGTTTTGGG
AATTCGGGCTTTGACAAAACAAAATCAGGCAAGTCTGGGTTGAAAAACAG
GTCGTAAACCGTTTGACAGGTTGATGTTTGGCACAAGGTTTTCAACGATC
TTCCATGTGTAGATAAACATGTATCTTTCTCGTCTTCGTTCCAGCGAGTA
GAGTTGGAATTCCTTCAATTTTGACCAGTATGACTTTTAAGGATGGTGGA
TTTTTCGAATAAAGCTCCATTGGACAATCTCAAGACTTAGTTTATCAGCT
TTCAGCCATGGATTCCAGAGTTGGGAGCAATATTCTAGTTTGGGTAAAA Run BLAST on NCBI transcript from alignment at scaffold_139:619098..620146 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047969 ID=TCONS_00047969|Name=TCONS_00047969|organism=Clytia hemisphaerica|type=transcript|length=1049bp|location=Sequence derived from alignment at scaffold_139:619098..620146 (Clytia hemisphaerica)
TTTTACCCAAACTAGAATATTGCTCCCAACTCTGGAATCCATGGCTGAAA
GCTGATAAACTAAGTCTTGAGATTGTCCAATGGAGCTTTATTCGAAAAAT
CCACCATCCTTAAAAGTCATACTGGTCAAAATTGAAGGAATTCCAACTCT
ACTCGCTGGAACGAAGACGAGAAAGATACATGTTTATCTACACATGGAAG
ATCGTTGAAAACCTTGTGCCAAACATCAACCTGTCAAACGGTTTACGACC
TGTTTTTCAACCCAGACTTGCCTGATTTTGTTTTGTCAAAGCCCGAATTC
CCAAAACATCAGCTGCCTTACAGACTATCTGATAAAATTTCTTGTCTACC
CGTAGGCCCATCTTGTTCAACTCCCTCCCAAAAGAATTGAGGAATTTAAG
TGGATGCCCTTTGTTAACCTTCAAAATAAAGTTAGACAAGTTCCTTGCCT
CTCTTCCAATGCTGCATACAACTCAATTAAACACCAAATCAACAACATGT
AGGCGGACATTAGATTGCTCACCTAGATGGGAGACCATCAAAAGCACTTC
CAAGTATTCCCAGTAAGTAATAtaatggtttacaaaaatgtctttcACAG
TCAAACCAATAAAGACTTTtaaattctgtttgaagattctgaaattcaaa
atgttgttctttaacagTTTTAGCTGTTTCCATTAGGATTTGTTCTTAAA
ATTCAtgctatgacgtcataaatgatgacctcatcgttttcagttttttt
ttagtATTCTAAATTCATATTGTCAATGCCTATATCActagtcaaaattt
gaaaacgatttcataaatgtttcagaagttatcagcacttaaAAATGTTG
AGTTTAAGgtgattttagctgggttttacgtcatgtttcacaataaagtc
ataaaacctgatctgacGACCTATGACCATAAAGATTTGCACAATAGTGC
AGTCTAAATGTGCCAAAAGTCATAAACATTGTGCACAAGGgcgtaaaagc
atgaaactttgcacaatggtagtttaggggtcaaaactggatttaaatc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047969-exon-scaffold_139-1491911889:619098..620146 | TCONS_00047969-exon-scaffold_139-1491911889:619098..620146 | Clytia hemisphaerica | exon |
| TCONS_00047969-exon-scaffold_139-1510915933:619098..620146 | TCONS_00047969-exon-scaffold_139-1510915933:619098..620146 | Clytia hemisphaerica | exon |
| TCONS_00047969-exon-scaffold_139-1575043694:619098..620146 | TCONS_00047969-exon-scaffold_139-1575043694:619098..620146 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_139 | supercontig | scaffold_139:619098..620146 . |
Blast
The following BLAST results are available for this feature:
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