TCONS_00047946 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047946
Unique NameTCONS_00047946
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length152

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047946 ID=TCONS_00047946|Name=TCONS_00047946|organism=Clytia hemisphaerica|type=transcript|length=152bp
ATCGAGAAAAGCGAAATCTTGTCTGACCCATCGAATCTTCTGACATTGAA
GTATTATAAATAAAAAGACATCGAATTCACCCATATTTATTTCTCGCATG
CCAAACGTGCTCAAGATTCAATATATCTCAGTTTTAACAGTCACATTCTG
TG
Run BLAST on NCBI

transcript from alignment at scaffold_139:65707..65858

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047946 ID=TCONS_00047946|Name=TCONS_00047946|organism=Clytia hemisphaerica|type=transcript|length=152bp|location=Sequence derived from alignment at scaffold_139:65707..65858 (Clytia hemisphaerica)
CACAGAATGTGACTGTTAAAACTGAGATATATTGAATCTTGAGCACGTTT
GGCATGCGAGAAATAAATATGGGTGAATTCGATGTCTTTTTATTTATAAT
ACTTCAATGTCAGAAGATTCGATGGGTCAGACAAGATTTCGCTTTTCTCG
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030507XLOC_030507Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047946-exon-scaffold_139-1491911889:65707..65858TCONS_00047946-exon-scaffold_139-1491911889:65707..65858Clytia hemisphaericaexon
TCONS_00047946-exon-scaffold_139-1510915933:65707..65858TCONS_00047946-exon-scaffold_139-1510915933:65707..65858Clytia hemisphaericaexon
TCONS_00047946-exon-scaffold_139-1575043694:65707..65858TCONS_00047946-exon-scaffold_139-1575043694:65707..65858Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:65707..65858 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047946 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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