TCONS_00047756 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00047756
Unique Name	TCONS_00047756
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1412

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_136:61169..70709-

transcript sequence

>TCONS_00047756 ID=TCONS_00047756|Name=TCONS_00047756|organism=Clytia hemisphaerica|type=transcript|length=1412bp
TTTGCTTATGGCTCCCGGGAAATTTTATGTGTGCAAATTTTCAagtcctt
tgtttttatctctTTTAGCCTCAAGATGTCCCAGATGCCAATGCAACAGT
TCTGTATGTTGGAAATTTGGATAAAAGAGTTACAGACGCTATGATGATAA
ATATTCTCAAAACTGGACTTGGACatattgaaaacaaaattcttGCATGC
AATATGTTTCCTGGTGATATGAATAATCCAGATGGTTATTGCTTTGTCCA
ATTTGAAGATAACAATGCTGCTTGTCAAGCAATGACATTTTTGAATGGTC
GTGATTTTTGTGGAAAGAAAGTGAAAGTTAATTGGGCAACAAATACAACA
ACAGGAGGACCTCCAAAAGTTATTGGcaCAAGTGTCACAATATATGTTGG
AAACTTGGATGACACCATTGACGAGAATGACTTAAGAACTGCCTTTGAAG
TCTTTGGAGAAATCATAAATATCAAAGTTGTCAGGGATCCAGTCACaaac
aaaagtaaaaacatAGGATTCATCTCTTACACAAACAAACCTGATGCTGA
AAAAGCTATCAGAGACATGAACCAGGCTATGTTGAAAACAAGGAGCATCA
AGACAAATTGGGCAACAAGAAATCAAAACCAAAAGCGAGAGGAGTTAGAC
TATGATGAAGTATTCCGAGAAACAGAAACAACCAATTGCACGGTTTACGT
TGGTGGGATCCCTGTTAATTGTCAAGATGCACAAATCAGAAGACATTTTG
AAGATCATGGAAAAGTTACTGATGTTAGGATCTTTCCTGCCAAAAACTAC
GCATTTGTTAGATTCGAATCACACGCTGCCGCAGCTACAGCAATCGTTAA
AACGAACGGAAGTGATTTAATGGGATCAACCTTAAAGTGTTGGTGGGGTA
AAGAAGGACCCGAAGGAGGTAGCAGCCGTCCACACAACAATTACAACAAC
TCTCACCATGGTGGTGGATACAACAAAGATCACACACACGCCATGCAAAA
CATGACTCCtcaacagcaacaacaataTATGCAACAATATATGCAATACA
ATCCATACTACCAACAACAATATTATCAATACTGGATGCAACAATATCAA
TATCAACAACAGATGCAACAAAATGGCGGCGGTGCTGGGGGCAACCCTGC
AGCCAGTGGTGGTAACTATCAACAAAACGGTTACCAAGGTTACGGTCAAC
AAAGTGCTGGAAGTAACCAAGGAGGCGATCACCAACAACAAAGTTATCAA
CAACAAAACTAACCgactttatttttttaacgAACTGCTTGCGCGCTTGT
AAATAGGTTTTGCTTTCATTGTTACAAACCCAACTACACCAACAACTTGT
GTCGATTttataaagaagaaaattttataaaaaatgaagaaattgctACT
CTAGTTTTCATT

Run BLAST on NCBI

transcript from alignment at scaffold_136:61169..70709-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00047756 ID=TCONS_00047756|Name=TCONS_00047756|organism=Clytia hemisphaerica|type=transcript|length=9541bp|location=Sequence derived from alignment at scaffold_136:61169..70709- (Clytia hemisphaerica)
TTTGCTTATGGCTCCCGGGAAATTTTATGTGTGCAAATTTTCAAGTCCTT
TGTTTTTATCTCTTTTAGCCTCAAGATGTCCCAGATGCCAATGCAACAGT
TCTGTAAGTTCCCATCTAAAGAAATTGTAATGAAGGCAATGATTCAGGGA
TTTGTTTAAAGGCCAGGGCAAACCAGTTCAACATTTCATCCAACATGACT
TTCCAATGTTGGATGAAATGTTGGATGGAAAACTCCTGTTGGTTGAAGCA
AAACTTCAGGTTTGTGGGACTTTTTTAAAAAACCATTCAACAATAATTAG
TTCATTCATTCTTTCAAAATAAAATGGCGTCAATTCAGACAATGAAAAAC
CAACCAGACAGTCTAAACTTAAACTCCTATATCAGGGTTAGAAACTAGGC
TGGTCTTACCTCTTTTATCTTTTCCTTTATAACAATTCAATGCTCACAAC
ACATGTGTACATGTACATTGACAAGTAATCCCTCAGAAGTTTATTCCGAA
ATCTGCAACAATAACAAAAGTTGTCTCTTCTACTGATTGCTTCCCAGCGC
TCCTTCACAGCTGTTTATCAAATTTCCACCAATAAGGTTGCCGCATTTCA
AACGGCCCTTCTCTTTGGCATCCGTTGCCTCTCAGTGCCTTGCACAACGA
GCGGCTGTAAAATCCCACCCTTCATATATTTGTTTCAATCTGTCATTTGT
GGCTTGGATTTTTTCCCCTCCTCAATTTACTGAAAAAAGCTGAGCAAATC
CCTTTGTTTGTCCTGTACTCGTTAGGTGCTCAAAGGATACATAGCATCTC
GAAGAGTTGTTAGGTTCGTTGGGTAGATTCAGCAAACAAAGACAAAATGA
ACGAAAATTTCGTTAACATTTTAATGAAAAGAAAGGCGCTGTGGTATATG
GTCATTGACCTTGGTTGCTGCACAGGTGACTGAGGTTCGATTCCCACTCG
CAGCGGTTCACTTGGCAAGTGAATAAACCTTCGCCCGGGTCAACCCATGC
CATGTGAGGGGAATTGGGTAGTCAGTTCAAGGTACTGACGGGGCGCTAAT
TGAAAGCGTCTATAGTTGCGAAAATTGGCCTCTAAGCCTCCTGCGACTCA
ACCAAATAGAAAAAGAAAAGAGAAACTATTTTGACAAATTTGTCTCACAG
CTAGATTGTGACAAGAATCCTCATGTATTAGAAATCTTAAATGTTGGGTC
ATATACTTAAGGTCCCGATAAACATAGCTAACTGAGGCCATAAATACAAA
ACATAGAAAATATGATGATGACTATGGTTCTTGGATTGGATTAGCAGTTA
AAAAATTGTAGTCAAGTGGTCCTTTCCAACAAACATTGCTCAATAATGAA
TATTTATAAATGGAAGTAATTCTTTTATAGGTATGTTGGAAATTTGGATA
AAAGAGTTACAGACGCTATGATGATAAATATTCTCAAAACTGGACTTGGA
CATATTGAAAACAAAATTCTTGCATGCAATATGTTTCCTGGTGATATGGT
AATAATTATCTTATTAAAAAAGGAAATCTAAAGGGTGAATTAGTGAAAAT
GTCCAACTTTTATATATTAANTTATTAAAAAAGGAAATCTAAAGGGTGAA
TTAGTGAAAATGTTCAACTTTTATATATTAATTATTAAGGCTTGCATTAT
CCTGAATTAAGGAAGTTCAAGGTATATTGAATATAAGCCTATCAAGTCAC
CAAAATCACCCATGCCGACATAATAATGAATTTCCATCATATTTCAAATT
TGTATTTCTGTTTCAGAATAATCCAGATGGTTATTGCTTTGTCCAATTTG
AAGATAACAATGCTGCTTGTCAAGCAATGACATTTTTGAATGGTCGTGAT
TTTTGTGGAAAGGTAACAAATCCTTATGGCAGGGAAATATCCTGAATGAA
TGTAACAGTGGATAATTTGAGATTCATGTGGGCAAAACCTAAATCAACAA
TGAGACCTTTCTATCATGAAAAATGAAATTTTTTTTTTAAGAAACACACT
TTTAAGAAACATGAGGCTCAAAATGCCTAAAAACTAAGAAACATCTAAGA
AACATGCTGAGGCTGAGAATGAGAAAATAACATTTTTTAATTCGTTTTTT
TTAAGAACCTTCCAATCAAAAGAAATTTTTTTTCTTTGCATGAAATTAGG
CTGATTATGTCAAAAAGTGTAGAAACATTTAAGGCTCAAAAGGCCGATTT
TTTAAGAAACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAGA
ATGTGTATATTTATTTTTTTTCCACAGAAAGTGAAAGTTAATTGGGCAAC
AAATACAACAACAGGAGGACCTCCAAAAGTTATTGGCAGTAAATATTTTT
TAATTTATTAATGCATTTTATTTTCTGTATGCCACCTGACTGCTACTCTG
TACCACAGTGTACCTGGCGTTTATCGCTTCTTAGTACACTCTAGGTGCTC
ACTGTCTGTTTAATTAAAAATTCCTGTCTAGAGACCTCTGCGATGAAGTA
TGATTTTAAAATAGCAACCACTTCTCTCATGGTCTCCCCTCTCTCACCAA
CACTCCATTGCAGCAGTCGGTTTGAAAAATCTCAAATGAGAAAAGACAAT
GACAACAGACCCTCTACGGCAATGAATTTTGAAATAAGCCGTAGATACTG
AGTTTGTGTACATACAACCTGACTGCCTGTTATTTTAAACTAAGCAGTGC
TAGAGTTTAATTAAAATTTCATGTTGGAATCAAAATTGAAAAAAANCAGT
GTTTAAAGTTCTTCCGTCTCAGACGGATTTCCGTCTTAGCAAGGTGCAAA
AAGAGGCTTTTCCGTCACCAAATTCAACAAAAATTCAGCAAAACATGAAG
AATCTGGCCAGATTTGTTGTTTAAAGTCTATTTCCGTCTGTGATGAAAAC
TTTGCTTTGACCACTGTATTTTAAACTAAGTAGTGCTAGAGTATAATTAA
AATTTCATGTTGAAATCAAAATTGAAAAAAACTTTTACTTGTTTTACTTT
TAGCAAGTGTCACAATATATGTTGGAAACTTGGATGACACCATTGACGAG
AATGACTTAAGAACTGCCTTTGAAGTCTTTGGAGAAATCATGTAAGTTTT
TCTTTAACTCATTAGTTGTCACTTTTATTAATCCTTTTTCCATCTTCATA
TTTTCTTGTTTTTATATCAATATCAATTTAAAACTTTCAAATTTATTTTT
TCATAAATTGCTAAATGATAATTTTATCATCTCATAATTATTGTAGATGG
CTCCAACAAAAATGAAAACATCAAAGCAACCTGAATTGCAAAAGAGTAAA
TCTCTATAGTTATTCTATTTGTCTCATTTTTTCTTTTTTATTTCTTTTTC
ATTATTTCAATTTTTTGGTATTTCATTATGCCTTTCTTTTACTTAATTAT
TACTTTTTGTTATTTTAGTTTAGACTTCTTGTAAAAGTGCATTTTGTTAT
TTTTAAGTTTAAATCCTTCTTTCAGAAATATCAAAGTTGTCAGGGATCCA
GTCACAAACAAAAGTAAAAACATAGGATTCATCTCTTACACAAACAAACC
TGTGAGTACTTTCTATCTGTGAGTGTGAATCTATTTATATTGTTTTTGTA
TTTCCCATGTGTTAAATTGTGACTCCTTCAGAAAAGAATCAACTTTTTAA
AAAGGTCATAAAAAGATTCTTTGTATTTGCAGCTGAAGTTTTAATCTCAA
CTTTTAATGTTTTTTTGGTGCATGAAAGACAAGGTTAAAATATCATGAAT
TTGCAAGGTGAAAAACGATTATTTTAGGATGCTGAAAAAGCTATCAGAGA
CATGAACCAGGCTATGTTGAAAACAAGGAGCATCAAGACAAATTGGGCAA
CAAGAAATCAAAACCAAAAGCGAGGTATGTTTTTTGCTTTTTTTAAAACT
ATTAACAATGGCTTGGAAACGACTCACAGAAAACATTAAAGAATGAAATT
TGTAATCAGCTTTGATTAGAAAGTTAAATTCTACATGATCCAGAGTGTCA
TTACTAAAATCTCAAAAAAAAAATCATAAAGTATTATGGGTAACCAAATA
GATGGCATGCAAAGGGAAAAAGCAACCTTCGAGTTAGAATACTTGAATTG
GATTAACTTCCACAAAATTAAATTTTGCAAAGAAAATGTGTGAGATTGCT
GACTTGCAAGATTAAATCAACGTGAAATTAAAAAAACTCTTTTTCAGTGG
AGGAACCAGTCAAAACACTATTCATGCCAAAAAATGAAAATTTTCAGCTT
TTTTCAGGCTCGTTTTCTAGATTAAGTCTGCACAGAATTTTTCGAAACAA
TTAACTTGCAAAATTAAATCGAAAAAATTTCGTGATTTCTTTATCCAATT
AAAGTAATAGCAATTTTAGTCGAAGTCTTCATTCAACGGTAGAATTTCAT
TTCCTTAAATTTTCAGCAAATAAAATGATTTTTTTTTTCTTAAAATATTT
CTCTCTGCAGAGGAGTTAGACTATGATGAAGTATTCCGAGAAACAGAAAC
AACCAATTGCACGGTTTACGTTGGTGGGATCCCTGTTAATTGTCAAGGTA
TACAATGTCTGATTAATCTTCAGCAATCACTATATTTTTCAAAGTAAACT
ACCTTTCTTTCTATAGTGTTATGTTCGTTTTATGGCCAGGCCATGGCGTA
CAGAGTGCATTCGATTTGTTTTAAAGTCAATATGAAAAATTGTTAGCTCT
TTGGAAAATTCTCGAAATTCTTCTGTCTGCAGTTTGCTTTCATATTTTTA
TTATTTTCTAAATAGATGCACAAATCAGAAGACATTTTGAAGATCATGGA
AAAGTTACTGATGTTAGGATCTTTCCTGCCAAAAACTACGCATTTGTTAG
GTAAATATTTTCTGCAAATCAAAAGGGTTACAGTCACAAAATGATCGTTT
TAGGTAAATTCCTAGATATTTGCTTTCAAATGACTGAAATGACTGACGAT
TTCAGGTGTAAAACTTTCTCTACCATGTTGAAATTCTATTTAGTCTGTTA
AAAAAAAGTAGATAGTAAAATTTAAGCGGTTTTGATTAAAGCCAAATCGA
CAGTATAAAAAGTGAGGTCTGGATCGCTGTAAAAAGTGTTGAGCTTGCAA
AAACAGTTTGTAAAACGAATGATCAAAACAAATTTCTTCGTCTTAGATTC
GAATCACACGCTGCCGCAGCTACAGCAATCGTTAAAACGAACGGAAGTGA
TTTAATGGGATCAACCTTAAAGGTAATGCAAAACTTATCACTTTCTTTTG
TCACAGCAGGCAAACAATGGCTAAAGCTATAGAACTTAGATTTCTTTAAA
AAGATCTCAAACTTTGCCTGAATCATTGCATTTTGTTGTGAAGAAGCATT
GAGTTTGGAATTAGATTTGGCCGGTCAAAAATGTTGTTTAACAAGTGTTG
TTTGGCACTTATTTGGTTCAATATCATGCAAAACTTAACTGAAAATCAAC
AGTTTTGCAAACAAAGAAATTCTCACCCTAAGAGAATTTAAAGGGGAATT
AACGTTTGGAATTAACCCTGAAATTTGTTTTCCAAACATTAAAGAGGAAG
AAAAATGTGATCGAACAAAAAAGAACCACTTCAAAATGTCTTTTATTCAT
TGAGTTATTAATCTTTAATTTCTCACAATTTTGACTCTACAATGGAGAAA
AACTCCCCCTCTGTGTATTTTTTGACGTAAAGTGCACTGCAACTATTCTC
ACTGTTACACTCTATGTAAAAGAGATATAAAACGTTAGAAATGAATCTTT
TTTAGAGTAATTATAGCAAAACGTCGAAGACATAAAACTAGGAGAATGTA
GTTAGTATTCCAAAGGTGCAGTAAATTCACTGACGGTAAAAAGAAACTCA
AAAACTGCATATAAAAAAGAGAAACACAGTTCGCACCCTATGTCACATTT
TTCGTATCGATAGCAACACAAGGGAATTTTCAAAGAACTCTTATTGGGTT
CTTCCAGAAAAAAATTGTAAATGGGGGGTGGAGGATATAACAATTTTTAG
TGATTTACCCCCCGAACAGAGTGACTTTTGGCCCCCCAGACAATAGGTTT
TACACCCCGGACAATCATCTGTTGACCCCCCAGACAGAGCAAATTTTGAT
TTTTTGCTACCCCCTGGACAAAATATCCTCCACCCCCCATGTACAATTTT
TTTCTGGAAGAGCCCATTCCGGATGTAGAAGAGTAAAGCCCTATAAACCA
TATATATTTGAAATCGTCTCAATGAGCTCTACAGTATTTGAATCTGTCAT
TTGTTTGTTGACAAATTTGAAACATTAATTCCCCTTTAAACTTGACTTTT
TCTTAATAACAGTGTTGGTGGGGTAAAGAAGGACCCGAAGGAGGTAGCAG
CCGTCCACACAACAATTACAACAACTCTCACCATGGTGGTGGATACAACA
AAGATCACACACACGCCATGCAAAACATGACTCCTCAACAGCAACAACAA
TATATGCAACAATATATGGTGAGTGAAACAAATCCTTTCATATAGAACAC
CTCCCCCCTATTTTTAAGGGTTGACATCTAAAAAAAACTTTCCCTTTCTT
CTTAAGGAAATGTTAGAATCCATATCCTCTTACTTTCTAAAGTAACTTTC
TTGTATCCGGCAGTCAAAACATTAAATTTCAAAGACTGTGATGCCCAGAT
ACACTATGAAGCCATATTTACTTTTCAATAGCCACTATTCTCTATTCTCT
AAGAGCTCTTTTCACACAACAGATAATTGAATGAGAGTAAAAATAATTTT
CTCATGTGTATCTATTCCAGCAGCAATACAATCCATACTACCAACAACAA
TATTATCAATACTGGATGCAACAATATCAATATCAACAACAGATGCAACA
AAATGGCGGCGGTGCTGGGGGCAACCCTGCAGCCAGTGGTGGTAACTATC
AACAAAACGGTTACCAAGGTTACGGTCAACAAAGTGCTGGAAGTAACCAA
GGAGGCGATCACCAACAACAAAGTTATCAACAACAAAACTAACCGACTTT
ATTTTTTTAACGAACTGCTTGCGCGCTTGTAAATAGGTTTTGCTTTCATT
GTTACAAACCCAACTACACCAACAACTTGTGTCGATTTTATAAAGAAGAA
AATTTTATAAAAAATGAAGAAATTCCTACTCTAGTTTTCATTTGTATTTG
TAACTTAAGTTTGTTCTCCGCAAATGTTAATTGCTGCCTGGTTGATCATT
CCTTTTCACATGCACGTAAAATTTTAATTTATATATTAAGCTCGTGGTCC
ACTTAGCCTTTTTTGGTCATCGAACAACGCGCACGGCTCGATTTTTGCAT
TCTTTTTAAAGTAGCCAATCAGCGGGCGAGAAGGTAAACATACTGTGTGT
GTGTGTTTGTTTTTATCATGTGCAATTGCTTTTGTTTTGATTTTCTCTTG
CGGGTAATGTTTTTCTTATTTACAATGGAAGTATAAAAGCGCTCAGCGAA
CAAAACGCTCGAGCTGTGTTTATCTGGTAATCGATGTAGAAATTTTCTTC
CGACACACTAAAGCTCTGAAGGTCGGGAAAATTTTAACATCTGGAACCTT
TGGGTTACCATTTTTCATTTTTCTGTAAGGTTTCTCTGGCAGCAGAGATT
TTCATGCCAAATTCAGTCGGGTGCAACTGATAGTCAAGCAAAAAGTGTAA
GGATAGCTAGACACAACTGTGATGCGGTACATCAAACGATGACTACTATA
GGTCTCCGATGGTGATATTGGCCCGCTCCTTCAGAGCTTTAGCGTGGGCG
GCCGCCAATAAACCATCGGAATATCAGATAAGAGCTGTGTGCGTTGTTGG
GCGACCAAAAAAGCTAAGTGGACCACGAGCTTTACAGAAAATCGTTCGTA
AGTAGGGAAATTCCCCGCTATTACACACTACGTAAGCTTAGGGAATTTCC
CATTCTCTTAGGTCCAAATTTTGAAAAAATCCGCCAAATTAAATCCTCGT
CAAAATTTAATTAGTATATTAGTATATTTTTTAAAGTATCTTTCATCCAT
TTCAGTGTCTCCAATTTCCCAAATTAATTCACTGCCATAAATCTCATTCC
TGCAAATCTCCAAAATTAATCCACTCAAATAGGGGGGTCCAAAAATTTTG
ATGTTTAGCCATCTGTTTTAAATTAATTTTTCATGCTGATTCCGAATTTG
AAATCCGTTTTTCCATATCTCTTACCCCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNACTTTTGGCCCCCCAGACAATAGGTTTT
ACACCCCGGACAATCATCTGTTGACCCCCCAGACAGAGCAAATTTTGATT
TTTTGCTACCCCCTGGACAAAATATCCTCCACCCCCCATGTACAATTTTT
TTCTGGAAGAGCCCATTCCGGATGTAGAAGAGTAAAGCCCTATAAACCAT
ATATATTTGAAATCGTCTCAATGAGCTCTACAGTATTTGAATCTGTCATT
TGTTTGTTGACAAATTTGAAACGTTAATTCCCCTTTAAACTTGACTTTTT
CTTAAAAACAGTGTTGGTGGGGTAAAGAAGGACCCGAAGGAGGTAGCAGC
CGTCCACACAACAATTACAACAACTCTCACCATGGTGGTGGATACAACAA
AGATCACACACACGCCATGCAAAACATGACTCCTCAACAGCAACAACAAT
ATATGCAACAATATATGGTGAGTGAAACAAATCCTCTCAGATAGAACACC
TCCCCCCTATTTTTAAGGGTTGACATCTAAAAAAAACTTTCCCTTTCTTC
TTAAGGAAATGTTAGAATCCATATCCTCTTACTTTCTAAAGTAACTTTCT
TGTATCCGGCAGTCAAAACATTAAATTTCAAAGACTGTGATGCCCAGATA
CACTATGAAGCCATATTTACTTTTCAATAGCCACTATTCTCTATTCTCTA
AGAGCTCTTTTCACACAACAGATAATTGAACGAGAGTAAAAATAATTTTC
TCATTTGTATCTATTCCAGCAGCAATACAATCCATACTACCAACAACAAT
ATTATCAATACTGGATGCAACAATATCAATATCAACAACAGATGCAACAA
AATGGCGGCGGTGCTGGGGGCAACCCTGCAGCCAGTGGTGGTAACTATCA
ACAAAACGGTTACCAAGGTTACGGTCAACAAAGTGCTGGAAGTAACCAAG
GAGGCGATCACCAACAACAAAGTTATCAACAACAAAACTAACCGACTTTA
TTTTTTTAACGAACTGCTTGCGCGCTTGTAAATAGGTTTTGCTTTCATTG
TTACAAACCCAACTACACCAACAACTTGTGTCGATTTTATAAAGAAGAAA
ATTTTATAAAAAATGAAGAAATTGCTACTCTAGTTTTCATT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_030407	XLOC_030407	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_136	supercontig	scaffold_136:61169..70709 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00119418	8.71494e-05	8.82359e-05	0.00513591	6.14461e-09	1.46258e-09	2.13865e-09	0	1.05293e-08	3.42776e-06	2.50855e-06	2.36352e-06	1.01663e-07	1.46811e-08	8.09166e-07	8.53933e-07	1.67239e-08	5.14967e-07	4.74712e-05	9.36228e-08	3.36561e-05	3.06381e-06	1.74293e-05	1.83899e-06	0	6.72783e-10	4.65484e-05	0.000595564	6.73559e-06	9.66789e-05

Blast

[Close]

BLAST of TCONS_00047756 vs. Swiss-Prot (Human)
Match: TIAR (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.604e-61
Identity = 112/284 (39.44%), Postives = 164/284 (57.75%), Query Frame = 3

Query:   84 DANATVLYVGNLDKRVTDAMMINILKTGLGHIENKILACNMFPGDMNNPDGYCFVQFEDNNAACQAMTFLNGRDFCGKKVKVNWATNTTTGGPPKVIGTSVTIYVGNLDDTIDENDLRTAFEVFGEIINIKVVRDPVTNKSKNIGFISYTNKPDAEKAIRDMNQAMLKTRSIKTNWATRN-------QNQKREELDYDEVFRETETTNCTVYVGGIPVNCQDAQIRRHFEDHGKVTDVRIFPAKNYAFVRFESHAAAATAIVKTNGSDLMGSTLKCWWGKEGPE 914
            D     LYVGNL + VT+ +++ +  + +G  +    +C M     +N D YCFV+F ++  A  A+  +NGR   GK+VKVNWAT  T     K       ++VG+L   I   D+++AF  FG+I + +VV+D  T KSK  GF+S+ NK DAE AI  M    L  R I+TNWATR        Q    ++L +++V  ++   NCTVY GGI     D  +R+ F   G++ ++R+FP K Y+FVRF +H +AA AIV  NG+ + G  +KC+WGKE P+
Sbjct:    5 DGQPRTLYVGNLSRDVTEVLILQLF-SQIGPCK----SCKMITEHTSN-DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 280

The following BLAST results are available for this feature:

BLAST of TCONS_00047756 vs. Swiss-Prot (Human)

BLAST of TCONS_00047756 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TIAR	1.604e-61	39.44	Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=...	[more]

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TCONS_00047756 (transcript) - C. hemisphaerica