TCONS_00047751 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00047751
Unique Name	TCONS_00047751
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2495

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_136:72930..89024+
coding sequence from alignment at scaffold_136:72930..89024+

transcript sequence

>TCONS_00047751 ID=TCONS_00047751|Name=TCONS_00047751|organism=Clytia hemisphaerica|type=transcript|length=2495bp
NGAAAGAAGACTTCAGTGTTCTTGCTTCGCTGCTTGCTGCTTGCTCAAAG
AGAAGGTTAAGTTAAACGCATGCGCAGTTGGATGAAAACGTCGCGCGTGT
CTTGCTCAGTCAAAATACATGTCTTTAGTTTTTTGGTGGATTTTGCAATA
ATCAAGCCAAAATATTCGACTTTAAAGATGGTAGCTCAGTTAACGTGAAT
TTCCAGGAATTGAAGAAGTTCCTTTCATTTTCgatcataaaaaatatttt
tggagggACATTTTCTACTATACTTTTGGAGATGAAACCTCACGAATCTA
TCATTAAACTTGTCTGCATATCAGGATTTTTGGATTTATTTGGTGTTGCT
ATGGTCTATCCCCAATTAGTCCATCGTGCAAAAGAGTTAGGGGCAAGCCC
TCGCAATATTGGAttatttggatcaatttatGGAACACTCCAGTTTTTTT
CAAGTCCTGTCATGgGGCAAATAAGTGATCACCTTGGACGAAGAAACGTG
TTGATAGTTGCATTACTTGGGACAAGTTTGAGTTACTTCTTGTTGGGAAC
AGTTGGAAGTATTTTGTTTCTTAGTTTAGCAAGGATTCCCTCAGGGATCT
TTAAATTCAGTTCCGCCATGAACAAAGCATTCCTTGTGGATATGAACCCG
CCAGAATCGAGAGCTGGTGTTTTGGGTAAATTCAATGCAGCATCAAGTAT
AGGGTTTGTTATTGGCCCAACTATTGCTGGATGGATGATGCAAACAAGTG
GTGGATTTCAATTAGTTGCATATATTTCAGGAACTATTTTTATTATCAAT
GCATTATTTAATCACTTTGTCGTGTCAAAATATTTAGATACGCTTATTGA
TGTCCAACAAAACAATCAGAGAGACAATGATAAAAAGCCAATATCATTAT
TTGCTGCATTTAATGTTTTTCGGGATGCACAGAATGTACCATGGCATGCA
GTATGGGAACCGTTTTTGAATAGATTTTTAATGAGTTTTAGTTTGATTAT
ATACAGAGCTAATTTCACCAGTATTTTAGCATTCAAGTTTGGTACTGATA
CATTGATGAATGGTTATATTCAATCTTTTAATGGTGCAACAAGTATGGCA
ACTGGATGGATGTTAGGAATTATCAGTAACTTCTTCCCTAGCAATACATT
AATGCATAATACATTTTCAATCATATTGGtcatttctttgtttattttga
gtGTAACACCATCATTATATATTTACGTATTATGTATAATTCCTCTATGC
GTATCATCTTCAGTCTTAAGAGTTACAAATGGAACTGCTATTGCTAATAG
AGCTGGAGAGGAAGCAAGGGGACTTGTAATGGGTCTTGCAGACACTCTTA
CTGCACTTGCCAGAGCATTTGGTCCCGCTATTGCTGGATTTGCATTGGAA
GTAAGTTATGAAGCACCTGGTCTTTGTGCTGCTACCTTTGCTTTGATTGG
TACGTTGATTGGGTTGTATGCGAAATCAGAGGCTACACGTATGTTACATG
TGGAATaggttattttccatttttttaatttcagtttTTGAATTTCATAT
CATTTTTGATACAGGATATGTATATTAAATTCGCTAGTGTTTGAGTAATG
CTCAACTGTAAGTAGCGTTACATATCcatcaagaaaaagaaaatgaatga
aatcGTTGGTTTTTTTCTTGATTGTAAAAATGTATTACGTAAATTTTgca
taattagcatatttcgCATATTtacctttttatattttttttctttgtat
agtCTTTTATTTAGATCACGTAATTATCTCGTGGTCTTCTCAGTATTTAA
ATTGTGAGCTCACCTTTTTAGAGCAGAGCTATCATTAGGAGTTCGAGATG
TACAGAAGAGTATGTAAAACAAGTTAACTATCAAGAACTATTCTGCTAAG
ACCCATCTGAACTGACCTCCGAtacataaaaatgaaataaaatggaGACC
TGGAAAACACGGtatataatagaccttttttcaaagaggatgttCTGTTG
AATAATAAAGTAGTCCATCAGTTATTATGTAATGAAAAATACCTCAAAGC
AGATGATCGGCCGCAGTGACCACGCtgagctttttttctttatGGTTGTT
ACCTATACAAGTGTTCACGCAGCAAGCTAGATAGTACAGATGCATTCATT
AGGTTGGGAATTCGAGACCTGATGATGTATCTCCACTTTCTAGCTTGCTG
GACTGACATATTtacctttttatatttttttttctttgtatagtCTTTTA
TTTAGATCACGTGATTATCTCGTGGTCCTCTTAGTATTTAAATTGTGAGC
TCACCTTTTTAGAGCAGAGCTATCATTAGGAGTTCGAGATGTAAAGAAGA
GTGTGTAAAACAAGTTAACTATCAAGAACTATTCTGCTAAGACCCATCTG
AACTGACCTCCGAtacataaaaatgaaataaaatggaGACCTGGAAAACC
CGTAAGTCtcgaattatgacgtcattatcatTTTATAAATcgaaa

Run BLAST on NCBI

protein sequence of TCONS_00047751-protein

>TCONS_00047751-protein ID=TCONS_00047751-protein|Name=TCONS_00047751-protein|organism=Clytia hemisphaerica|type=polypeptide|length=408bp
MKPHESIIKLVCISGFLDLFGVAMVYPQLVHRAKELGASPRNIGLFGSIY
GTLQFFSSPVMGQISDHLGRRNVLIVALLGTSLSYFLLGTVGSILFLSLA
RIPSGIFKFSSAMNKAFLVDMNPPESRAGVLGKFNAASSIGFVIGPTIAG
WMMQTSGGFQLVAYISGTIFIINALFNHFVVSKYLDTLIDVQQNNQRDND
KKPISLFAAFNVFRDAQNVPWHAVWEPFLNRFLMSFSLIIYRANFTSILA
FKFGTDTLMNGYIQSFNGATSMATGWMLGIISNFFPSNTLMHNTFSIILV
ISLFILSVTPSLYIYVLCIIPLCVSSSVLRVTNGTAIANRAGEEARGLVM
GLADTLTALARAFGPAIAGFALEVSYEAPGLCAATFALIGTLIGLYAKSE
ATRMLHVE

Run BLAST on NCBI

transcript from alignment at scaffold_136:72930..89024+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00047751 ID=TCONS_00047751|Name=TCONS_00047751|organism=Clytia hemisphaerica|type=transcript|length=16095bp|location=Sequence derived from alignment at scaffold_136:72930..89024+ (Clytia hemisphaerica)
NGAAAGAAGACTTCAGTGTTCTTGCTTCGCTGCTTGCTGCTTGCTCAAAG
AGAAGGTTAAGTTAAACGCATGCGCAGTTGGATGAAAACGTCGCGCGTGT
CTTGCTCAGTCAAAATACATGTCTTTAGTTTTTTGGTGGATTTTGCAATA
ATCAAGCCAAAATATTCGACTTTAAAGATGGTAGCTCAGTTAACGTGAAT
TTCCAGGAATTGAAGAAGTTCCTTTCATTTTCgatcataaaaaatatttt
tggagggACATTTTCTACTATACTTTTGGAGATGAAACCTCACGAATCTA
TCATTAAACTTGTCTGCATATCAGGATTTTTGGTAAGTTataatattatc
aaaatacataaaattgtaCTTGCAAAAATTGGATAGATctttccagacga
tctcaatcgaacggaatcgacgatcgaaccaatcgaaccaaatcgaacgc
aatcgaccaattgaaattcgattgtcgaacgcaatcgaatctcaatcgaa
tgtcaaaattctgggtaatattcgattggttcgattgttgttcgactggt
tcgatcgtcgattccgttcgattgagatcgtctggctttattcttgcagc
ttcacaatcatccaagctctcaaacatcacaagctgaatgaaattacttt
cgatttcccgtagaaattatgcgatgaacaatccgggggtcaatgattcg
acgatcgaacgcaatcgaacgcaatcgaacatcaatcgaacgcaatcgaa
tatcaatcgaatctgaaaggtgcggtaatattcgattgagattcgattgc
gttcgacaatcgaatttcaatcggtcgattgctttcgatttggttcgact
ggttcgatcgtcgattccgttcgattgagatcgtctggatctTTCATTTt
ggttatatttttttcttttggttcTTTTATATTCTGAAGATGATAttaca
aaaaagaagaaaataggCTGCCATATTTCAATCACTCTTTTGTCATTTGC
ATGTTTTTTTCCCCAGACATTGCACCATATTGCATTTACATTTGGTATGG
AAAACCTGTTATAAAAATGCCACACCCCTGCATCCATCATGTGCATTCAT
GTGCATGTGCAACCCACCACTGCGGTCGGTGTGCAACTGCAAAGAGTTCT
ACTCAATAACAACTTAACCACTAGGCTACCAATCCGCTGAAAATTTACGT
GATTTGAGCAAATTTATAAAGTGACATATActataagttggtctaatgag
GACCctctgccgacgcaccggacttaacgaacaccggacacgcgaaagtc
tggtgtaaaatgaaaattttttttaccactggACAATTTCTAAACCAGAC
TTAAAGAAGTACGATGTCCgggtcggagaaggatattttttcccaccgga
caatcaaaacaccggacatggcCAGTCCGGTgggtccggtgtttcttaat
tttttgtttcataaatgtccggcgtccaaaatccTCTGTATGCAACACcc
gactgacaccggacttattgcgtccggtgtagcgaaaggatactttttgc
caccggacaaatacactggacagtccggtgcgtcggcagggtcctgtcta
atgtcgacatccgtctactaagttagggaaaccatccaggatcctgccat
tctataagccagcaaaaactaaatgccacttgtaaacttaagtttcttac
tattttccatcaaTAACAACCAAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNgaataataagaaggtcgaaatcactgatagacta
aagatttttcctctcatcgcgctaatcaaagtcaatcagcgattccgacc
ttccttagtttctattgttcctatctctaaagaagggtgtcaaaattaga
agacggatgtcgacattagaccaacttacggaagtaccgtgagattgggt
ataTAACTTgaatcagtggaggctaacatgcatagccctcaaatgaaaga
cctggctggtcattaaaatacaataaAGTTAAATCAAGACAAAAGTGGTA
GAGTAgggctgcgagcggagctgcgtactGTAGTTGTATTTTAACGACCA
GAcaagtcattcatttgagggctatgcatgttagcctccactgatgcaag
ttacccaatctcacgatATATAATAGAcgttttttcaaagaggatgttCT
GTTGAATAATAAAGTAGTCCATCAGTTATTATGtaatagtcaggtagaat
tagcctgagacctggacaaaattgccatcaagctgaaaattggcacagat
gttctttagggtatactgagtaaccaaaaaaaaagccccatcAATCCGGA
CAGGGGAAACCACTTTTTCGGACAGTTTAAAACCGGACATGTCCGGAAAt
tatgtccgaaaaaaaaattgttNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCtgagttaccaaaaaaaaagccccatcAATCCGGACAGGGGA
AACCACTTTTTCGGACAGTTTAAAACCGGACATGTCCGGAAAttatgtcc
gaaaaaaaaattgttcagatatacaagtattatatatcaaaagaaagata
atttcaagacgaacaaaaaatttgcttacaaaaagtcatggaaataaaca
aagaaaaagttatGAGTATCAGAAAAAACCTTACTGtccaattatttttg
aattatgtagTAGTATTCCCTATTCTCAATGGCAGCGAATCTTCTTACAG
CTTCAAGCCATGTGTTTTTAGACCAGCTCCTGAGTGCCGGGTAGGGCTAG
CCTAGAGGGGTAGTAATTTTCTATACGATTTTCATGCTCCTCAATATATT
TATGGAATGAAGAGGTTAATAGCGTTTTAAGGGGGCTTTTGAATTATGGG
GTCCTAAAAGAGCTCGGGTAAGGAATTATTATTGAGAAGCCGTTTTATGT
CAGTAACATCAGTGCATATCTTTTTATCTTAGCCATGGAAATGTCTTGAA
ACTTGGTAAAATACTCAAAAGAAGTAGTAAAACAATcttaagaaattttt
gaaatatgttttcCGGGGGCTTGCGGGTAAAAGTAgccatttttgcctat
ttttagcCTGTTTTCATCCTCATtaacaaattacacgctttaaaatattc
aaaaatgcaacaaaaacatagaaaacgttGGACTTAATCGAAATCGTTAA
GAAAATTAAGGTTACGTTGTCATTACTGGCAATTTTCAAcgcttcagggg
gtaaaaaatgctatttttaccTATATTTTGACTATTTTGCTTACCTAAGC
TAGTTGGAGAGCTCAAAAATGCCCACAAACCTCATAGAAGTGTGCATAAT
ATtgaacttcaaaacttttgccTATTTTTCACCTATTTTGTTTACCtgcg
aaagcagccggcgaggcgacctttttttcaaatgtgttctgagagcatat
ttctgctagaaattttgatctgttctgatctgagaacttcaaaaattaAT
CAGCTCGAAATAATAATGTGTTCTGACAAGACAAGGGATAATCAAGttca
tctaacgtgttcttgttgtctaggtaaccctagaaagtttcaggagacag
gggtataatcaagagaaaattgatgtaatcttgttgcctagtaatcctag
aaattttcagaacacatcttttgtggagaaaaacaaatatcttacaagtt
tatcttggcaaactgtttttcctagattttagaacacatcaataCGTGTA
TAGTTTGTGAGTTTCCTTAAGATTCACAGTCAAATCTCAGCCGCCTCAGG
TTCCTTATAAAGGTgtttcttataacaaaaatacaacgtgtagtcaaata
aaaaaaatctaaaatttcagtgatccgcgaaattaaattcccgcgaattt
ttcgaaaatcgatgaaccgcgaaattaaattcccacaaaaaaaaaacaat
ttgaccaaccgcgaaattaaattcctgcgaaaatttcttcccttaaggta
ctacAATTTCACGACACGTTTATTTGCACTTTTTGGCATCTCAGGGGGCA
AAATTCGGGGCATTCTCCGACCGCCATGTTGTACACTGAGTATCAACCTC
AGGACGACCAAGTATAGAAATTTTATGGCGCTTGTGTCAATCCAATCACT
ATAgagagaatcaaagatgaaagaTATTGCtgtattaatgtctagcagat
tgTATCAGTATACATGCTTACCATTGACTGACGAATTCCCCCAGAAACCT
CCGAGTTTAATTGAAAtgtgtttctttcaaaagaaatcctcTACatcatt
cccaaatgtataacagtaattgtactaaactattaattatacttcaatgg
aatcgaaataatacacagatctttatgttatcattctctatcactgactc
tttttttaAAGCGTCGATGATATTTTTGAGATATGCTTTCCACGACGCGA
GTAAAAGTATCAACTTTAAACTTAATCCAAGACCTTAGATTGTCGTCATG
CTTACTTTTCAcagcgttgattgcgcgctgaatagaattgaTATTCGCTG
TCACAGGTCAGAATATGATTTCGACATGTGATTTTCATGGTAGTCATGTT
CTGATCGAGGTGATGTTTTGGTGTCAGTATTCCCTCTACCGGTAAGTAGG
TACCTCTATCATTGAACATACTTTAATCATAGGAATCTTAgcaagactaa
ttttagcgttttggcgagttttccctattttcgctaaaatttatccgcgc
gaaatttctggttatattgccttgatacatttttatcaataggaagggtt
tcagtacAAAGATatgctagaaaacgaaagcgattaataatataatacga
gtattcgctaaaatttatccacgcgaaatttttagaaatcgtgattcgct
aaaataaatccaaaaaaaatcaagattttcctgactcgctaatatactgt
aatatacgctaaaataagtctcgctaaaatttctacgattaaagtaatat
CTGTGTTTATTTTTCTCACTTTCACTAATTTTGTTGTCTGGTCATTTATT
TTCACCAATTCTTTCTTAATATAAAGATCTAGGTAATTTTTTTAGTAACC
CGCATGAGTTCAACACAATGTTTGCtgaattgaaaaaatgtggCATCatg
gtaccgtgagattgggtaacttgcatcagtggaggctaacatgcatagcc
ctcaaatgaatgacctgtctggtcattgaaatacaactacgtagctccgc
tcgcagctctactctatcatttttgttttgatttaactttgtattttaat
gaccagacaagtcattcatttgagggctatgcatgttagcctccactgat
gcaagttacccaatctcacggtaattACTCTTACCAGaatatgatttatt
tatttgttacgATATGCACTTGTATTAATAGACCATGGCTGCATTCGAAT
GCGACCCGAAAGCTTGGCTATCAACCCAAAGGTGGAGGAAGGtgtcactc
tttctccctggactACTCACTACTCCAATTACCCTTTATCTTTCTCTTTA
ATACTGAGCATTAGGATTGAACCTACGACCTCGCGCATCTTTTCACTATG
GTTCGCTTCAACGTTTCATTTTCAGGGTTTGCAATTAACTGTATAGCGAG
TTGATTTTTATCAGGCGGAAAAGTTGGGTCCAAATTAATTGTTTCATATC
TAAGGAACTGTATCGTACGGGTTGTTCGACAATATATCCAAGCAGATTTC
TGGGAAATTTCTTGTAACGGACTTTTTTGCTTTCATTTTAATGCTTAGGT
CGTAAAGTGTTGTTTTCCCTTGCTCCTCATTACTAAGCCTTGGCGATTGC
GTCAGTCAAAGCTGTTTCGAATGACGAATGACGATGCGCTCTCGAACTAG
GTAAGGTAAGCAAAATAGGCGAAATATAGGTAAAAACTGGCAAAAATAGC
ATTTGAAACGTTGAAAATTGCCAGTAATGACGACGTAACCTTAACGATTT
CGATTAAGTGCaacattttctatgtttttgtcgagtttttgagtttttta
aagcgtgtaatttgttaAAGAGGGTCCAAACAGGCCAACAATAGGCAAAA
ACGGCTTCTTTTTACCCGTTTTTCGCCTTGCGAGCCCCTGGAAAACGctt
ttcgaagtttttttgttttactaCTTCTTTTGAGTATATTTACCAAGTGT
CAAGACATTTCCATGGCTAAGATAAAAAGATATGGACTGATGTTACTGAC
ATAAAACGGCTTTTCAATAGTAATTCCTTACCCGAACTCTTTTAGGACCC
TCTAATTCAAAAGCCCCCTTAAAACGCTATTTACCTCTTCATTCCATAAA
ATGGATGTTGAGGAGCATGAAAATCGTATAGAAAATTACTACCCCTCTAG
GTTAGCCCTACCCGGCACTCAGGAGCTGGTCTAAAAACACATGGCTTGAA
GCTGTAAGGAGATTCGCTACCATTGAGAATAGGGAATACTACTACATAAT
TCAAAAATTGGACAATAGGGTTTTTTCTGATACTCATAACTTTTTCTGTG
TTTATTTCCATGACTTTTTGTAGGCAAATTTTTTGTTCGTCTTGAAagta
tctttcttttgatatataNtacataattcaaaaataattggaCAGTAGGG
TTTTTTCTGATACTCATAACTCTTTATGTGTTTATTTTCATGACTTCTTG
taaggaaattttttgtttgtcttgaaattatctttcttttgatatataat
ccttgtatatttgaacaacttttttttcggacaTATTTTCCGGACATGTC
TGGTTTAAAACTGTCCGAAAAAGTGGTTTCCCCTGTCCGGATTgatgggg
ctttttttttgctaactcagtataccctaaagaacatctgtgccaatttt
cagcttgatggcaATTTTGTCCGGGGTGTGGTGAAATTTCaactaattct
acctgactataaTGAAAAATACCTCAAATAGGGTATggcgtcaacagtca
tttttggggcaaagtcagaaaattcaagatgtagtgtttttttatgaaaa
tttaacctattgtgaggcattctgcgcaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattggaaaaa
atggcattttctggccttttcaggcctgtaaatatgtcaaaactattgca
aatcttatttttttcacttgctgtactaaatcttatgaagaaacaacaaa
ataatcatattggattgaaaattgtgcccattagagccctaaacgagccg
ttttaagccaattttgggtaacaaaatgctttttaaggccaattttgcaa
gctcataaactttaaactgattgattcacatatctgaaattttcagagat
gcaagtcttcaataaagtctttcaaaaaatcataatggcgtcttcaaaaa
tcgctttttagcaaaaaaaatcatatttctcaaaaaacagcattttttaa
ggcacacttctacaaactgagtttaaatgctgactgaaactttttttgta
GTGATAGTATACttgagatactccagggaaatcaaaatcatttgggtctg
ggatgcgtctatgtccgccattatggaaataaaatccctgctaagaacca
tttttcaggccaaaaacccaaatttggactgaaaaaatctctaaaatgtc
aatagacatgggtcgaaattttcttgcagtgatagtattctggaaatact
acaggaaaatcaaagtcatctgggcttgggatttgggtaaatccaccatt
ttggaattgaaattcctgctaaaacgcaatatttcaatcaaaaatcaata
tttcaatcaaaaatcaaatttttgactcaaaaaatcttaaaaatggcaat
agacatgaaccaggctgcatcatttgaaaatttcaggcgtgtggtcaatc
acactcctaaaaccttaattttagtaatttaggcgtgtgataaANGAAAA
TTtcaggcgtgtggtcaatcacactcTTAAAATCctaattttagtaattt
aggcgtgtgataaAGAGTGCTATGCACAACTTTCAGTTGTGAAACTTACT
TTATGGGGTGTGATTGATCGCACTCCTCAgacattttaggtgtgtgtgga
ggtgtgcgcATGCTATCGCACGCCTCAAATGATGcagaacctaaaatctt
tttgcagtgatagtcttctggaaatactccaggtaAATCAAAATcgtttg
ggtttaggatttgggtatatcccccattatggaattgaaatatgtgttaa
aactggctaaaatacaacgtttcaagcaaaaacccccGTTTTTGAATAAA
AATTGCTCTAAAATGACAATAGACATGGACCCAAATTTTTTTGAAGTGAT
AGTATTCTGTGAATATTCCTGGGAAAACAAAAACATTTCAGTCTGAGATT
TGTTTACATCCACCCTTATGGAAATGAAATCTCTGTTAAAATGCTACATA
TTTCCATCCGATACATCATaattgactaaatattttgtatattatatTAA
ACAAAGAATGTGAATTTACAATCTTTTTATTTAGAATTACTAGttgaaat
aaattatttaaaaaatcccatttcactcaacaattctttatagcccactt
acatttccattttcaaaacttgttccgtcaaaaaaagattgaattttagc
ttgaaatattatatacattttaaaactggcttCAGTTTAAAAATTGTGGT
CCCAGAAGCATCTTATACCTGAATAGTTTTTACCCCTAGaatatttacag
aacactatcactgcaaaaagattttaggttcatgtctattgccatattag
agcagtttttaagtcaatataggatttttgattgaaatgttgcaatttag
ccagttttagcacagatttcaattccataatgggggatatacccaaatcc
taaacccaaatgattttgattttcctaggagaatttccagaagactatca
ctgcaaaaagattttaggttcatgtctattgccatttttaagattttttg
agtcaaaatttggatttttgattgaaatattgcgNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNcgttttagcaggaatttcaatttcaaaatg
gtggatatacccaaatcccaagcccagatgactttgattttcctgcagta
tttccagaatactatcactgcaaaataaTTTGGACCCATGTCTGttgaca
ttttagagattttttcagtccaaatttgggttttttgcctgaaaaatggc
tcttagcaggggttttatttccataatggcggacatagacgcatcccaga
cgcaaatgattttgatttccctggagtatctccagtatactatcactgca
aaagaAATTTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNttttgacatatttacaggcctgaaaaggccagaaa
atgccattttttccaatttttacctgtagtgcgaatcagtacccccaggg
gggttcagccaattttgaagttttgacattaaaaattgcgcagaatgcct
cacaataggttaaattttcataaaaaaacactacatcttcaattttctga
ctttgacatttgatgCCCCACCCTACCTCAAAGCAAATGATCGGCCGCAG
TGACCACGCtgagctttttttctttatGGTTGTTACCTATACAAGTGTCT
ACGCAGCAAGCTAGATAGTACAGATGCATTCATTAGATTGGGAATTCGAG
ACCTGATGGTGTATCTCCACTTTCTAGCTTGCTGTACTGACAATTTCATA
GGTAACAGCTGTAAAGAAAAGCGTGCGTCGCTGTGGCCAATCATCTGctt
taaggtatttttcatTACGTAATTTCTACTGgactattttattattttat
tattaataTTAACGTCTATGGGTAACCAGACCTCACGAGTTAGGCTAATT
GTTATGATCCCAAATCCTCCAAATGAGCCCCACCCATGCAAACATCCTTG
GAGGGTAAACCTCCAATCAGGTGTGGGGGTTACTCGTTTTTTCCAGGTTG
GGCAGCTTTGCTGGCTCACTCTATATAGGCACTGCGCGCCCTGTGCATGA
TACTTGTGTCTTCTCGGGATTTAGTTGCTTCTTCTTCCATGGGTCATTTT
TTCGTACATATTTCAAGCCTATTCTATGTTCAGAAGAAATAAGATTGCAT
TGCTCTTCCCATTcataaaattataaattaagctataatatatagataga
tttttaggcttttcaCATGCCATTATCTCTCTGATATATAGTTGATGTAC
AACACAGTGCTGGTGAGTCCCAATAACTATAAGTCCCAAAAAGGCATACA
ATTGCTCTCAGGTAGCAGAGCAGAGCAAGTGTATGCAATCTCCAGATAGA
AGGTAGTTTGACAGAAATTCTATGAAACCAGTAAAATATATACCTAATTG
AAAAAAGAGACACAATATACCTATTAACCCTAAGCAGCACAGTTTGCTTT
TTAGGGGtctggtaatgaatttaaaaagaatttttgtgGCATTTTCAGGT
TAACTAAGTGAAACCAAGCAAATTCCTGCCTAAACTCTAGACACATTTTC
ATAGTGCAAACTATTTTAGCATTCAAATgacttaccgtcaactgctccaa
cttgggactatctgacgcaacatgggacggccatgcCACCACCATTTAat
ctatttgttaatcccattgggcgGTAGGCAGTTAGGCGGCGGGCATTCTC
TATCCTCCATTCGGTGTCCGctcattttgaatgaaacaaaagttaaaaag
gttgcactatcagtgaaagttatcgtgacatgttatgacagaaagtatga
ttgataaactttgtggagttatcaaaacaaatttgttgtcaacgagattt
aacagtaagtgaaaatacaggccagatatcaacaagtcccatgttgtgAC
CACttgtcccaagttggagcagttgacagtaacTATATTGATGTTACGAT
ATCACTTCAATGCAAATgtatctttcatttttcaaaaagcattccTACAC
TTGTTCTTTCTATATATTTgtcaagaaaaattttccttatATTTTCATCA
CCAGTTTTTTCAAAAGCTCTAAAGGTTGTAATATGCATAGCAAAATTCAC
AGGATAAAAACATTAAGATACTTTAATCTGCAACACCAATTAAATTGCCC
GAAAACAGCCTGCTATATTTCCTAACACAAATATAATTCAAAACAAAGGA
CAAAGAAAGGACACGAACAAGACAACTTAATTTCTAATGCCTAAATTTGC
ACAAAGTATTTTGAAATACCGGCTGAATAGCtgatacaaaaaaatatgaG
TCAGATCTGGACAAAGTTATTTTCTATCATGAATTAACGTCATAACGATG
TTGAACCAATTTCCAAAACGTATAccactgtctatcaagagttattaact
tgattcttataaaatagatGCTTagaagaaaaatagatatgctcataTTG
AGCATCTTTCCTTATTTACTTGTGAGAATTGATGTCGAAAGGAAAGCGTG
catatatacaattttttttaatttggcgtGTAGGTCCATCCCCAAAATTt
aaaatccccgcgaaagtttatcccgtTATAGTACGCTAAggcaaaattaa
taaaattgttGCCCTTTTTTACTTAACAGGATTTATTTGGTGTTGCTATG
GTCTATCCCCAATTAGTCCATCGTGCAAAAGAGTTAGGGGCAAGCCCTCG
CAATATTGGAttatttggatcaatttatGGAACACTCCAGTTTTTTTCAA
GTCCTGTCATGGTAAGTAGAGGATTTTGTATGAAAACTTTTTGTTGATGA
ATTACCCCCATATGTCCCAACTGCCAGATAACAATGAAATAAGGCATATA
TTTATATAcctcatttttcattcagattTTGAACATGTTCAAAAAAAGTT
CTTTGCCCAGCCAACTATCTAACAGGtggtgaggtgaggtatttacAAAT
TACGTATTACTGTAGTTTGAAACAAAGTTTTAGATTTAGGGTCATATGTA
ACCAATTGCTAGATTCATTATGAGACTAATATATATTTTAATAAACCAAT
TTACTGTAACAAGATAGCAGTGCATATTAGTACCGTGACAAAAGTAACTA
AAAAATTAACTTGAAAAACATCATTGTAACAGTGTTTTGGTGAGAAATTA
TTCTGAGCATATCAGATATGTTATGTTGAATATTCTTCCTCTAAATTTTG
TGTTATTTTTCTgcctttctttttatttaggGGCAAATAAGTGATCACCT
TGGACGAAGAAACGTGTTGATAGTTGCATTACTTGGGACAAGTTTGAGTT
ACTTCTTGTTGGGAACAGTTGGAAGTATTTTGTTTCTTAGTTTAGCAAGG
ATTCCCTCAGGTAGGTTCTTTATTCAtgtaacaaaaaaattcatattaGC
TCTACTTTTACatgcataaaaacaatgatttgCTGTGTTCTTGACACATT
ACAAAATCTTAGAAATCTtcaaggttaaaaatattaaattattaatatta
ttgttattataaaaTTGTATGGGAACTGAGTTCTGaggaacttttttttc
tttgtcaaggTCCTTCGCATTAAGTGCTTTCCTCCTTAAATTAAGTGAGC
AACAAAGTTAACAGTTtcgttttcatttctttctttacGTCTAGGGATCT
TTAAATTCAGTTCCGCCATGAACAAAGCATTCCTTGTGGATATGAACCCG
CCAGAATCGAGAGCTGGTGTTTTGGGTAAATTCAATGCAGCATCAAGTAT
AGGGTTTGTTATTGGCCCAACTATTGCTGGATGGATGATGCAAACAAGTG
GTGGATTTCAATTAGTTGCATATATTTCAGGAACTATTTTTATTATCAAT
GCATTATTTAATCACTTTGTCGTGTCAAAATATTTAGATACGCTTATTGA
TGTCCAACAAAACAATCAGAGAGACAATGATAAAAAGCCAATATCATTAT
TTGCTGCATTTAATGTTTTTCGGGATGCACAGAATGTACCATGGCATGCA
GTATGGGAACCGTTTTTGAATAGATTTTTAATGAGTTTTAGTTTGATTAT
ATACAGAGCTAATTTCACCAGTATTTTAGCATTCAAGTTTGGTACTGATA
CATTGATGAATGGTTATATTCAATCTTTTAATGGTGCAACAAGTATGGCA
ACTGGATGGATGTTAGGAATTATCAGTAACTTCTTCCCTAGCAATACATT
AATGCATAATACATTTTCAATCATATTGGtcatttctttgtttattttga
gtGTAACACCATCATTATATATTTACGTATTATGTATAATTCCTCTATGC
GTATCATCTTCAGTCTTAAGAGTTACAAATGGAACTGCTATTGCTAATAG
AGCTGGAGAGGAAGCAAGGGGACTTGTAATGGGTCTTGCAGACACTCTTA
CTGCACTTGCCAGAGCATTTGGTCCCGCTATTGCTGGATTTGCATTGGAA
GTAAGTTATGAAGCACCTGGTCTTTGTGCTGCTACCTTTGCTTTGATTGG
TACGTTGATTGGGTTGTATGCGAAATCAGAGGCTACACGTATGTTACATG
TGGAATaggttattttccatttttttaatttcagtttTTGAATTTCATAT
CATTTTTGATACAGGATATGTATATTAAATTCGCTAGTGTTTGAGTAATG
CTCAACTGTAAGTAGCGTTACATATCcatcaagaaaaagaaaatgaatga
aatcGTTGGTTTTTTTCTTGATTGTAAAAATGTATTACGTAAATTTTgca
taattagcatatttcgCATATTtacctttttatattttttttctttgtat
agtCTTTTATTTAGATCACGTAATTATCTCGTGGTCTTCTCAGTATTTAA
ATTGTGAGCTCACCTTTTTAGAGCAGAGCTATCATTAGGAGTTCGAGATG
TACAGAAGAGTATGTAAAACAAGTTAACTATCAAGAACTATTCTGCTAAG
ACCCATCTGAACTGACCTCCGAtacataaaaatgaaataaaatggaGACC
TGGAAAACACGGtatataatagaccttttttcaaagaggatgttCTGTTG
AATAATAAAGTAGTCCATCAGTTATTATGTAATGAAAAATACCTCAAAGC
AGATGATCGGCCGCAGTGACCACGCtgagctttttttctttatGGTTGTT
ACCTATACAAGTGTTCACGCAGCAAGCTAGATAGTACAGATGCATTCATT
AGGTTGGGAATTCGAGACCTGATGATGTATCTCCACTTTCTAGCTTGCTG
GACTGACATATTtacctttttatatttttttttctttgtatagtCTTTTA
TTTAGATCACGTGATTATCTCGTGGTCCTCTTAGTATTTAAATTGTGAGC
TCACCTTTTTAGAGCAGAGCTATCATTAGGAGTTCGAGATGTAAAGAAGA
GTGTGTAAAACAAGTTAACTATCAAGAACTATTCTGCTAAGACCCATCTG
AACTGACCTCCGAtacataaaaatgaaataaaatggaGACCTGGAAAACC
CGTAAGTCtcgaattatgacgtcattatcatTTTATAAATcgaaa

Coding sequence (CDS) from alignment at scaffold_136:72930..89024+

>TCONS_00047751 ID=TCONS_00047751|Name=TCONS_00047751|organism=Clytia hemisphaerica|type=CDS|length=4908bp|location=Sequence derived from alignment at scaffold_136:72930..89024+ (Clytia hemisphaerica)
ATGAAACCTCACGAATCTATCATTAAACTTGTCTGCATATCAGGATTTTT
GGATTTATTTGGTGTTGCTATGGTCTATCCCCAATTAGTCCATCGTGCAA
AAGAGTTAGGGGCAAGCCCTCGCAATATTGGAttatttggatcaatttat
GGAACACTCCAGTTTTTTTCAAGTCCTGTCATGgGGCAAATAAGTGATCA
CCTTGGACGAAGAAACGTGTTGATAGTTGCATTACTTGGGACAAGTTTGA
GTTACTTCTTGTTGGGAACAGTTGGAAGTATTTTGTTTCTTAGTTTAGCA
AGGATTCCCTCAGGGATCTTTAAATTCAGTTCCGCCATGAACAAAGCATT
CCTTGTGGATATGAACCCGCCAGAATCGAGAGCTGGTGTTTTGGGTAAAT
TCAATGCAGCATCAAGTATAGGGTTTGTTATTGGCCCAACTATTGCTGGA
TGGATGATGCAAACAAGTGGTGGATTTCAATTAGTTGCATATATTTCAGG
AACTATTTTTATTATCAATGCATTATTTAATCACTTTGTCGTGTCAAAAT
ATTTAGATACGCTTATTGATGTCCAACAAAACAATCAGAGAGACAATGAT
AAAAAGCCAATATCATTATTTGCTGCATTTAATGTTTTTCGGGATGCACA
GAATGTACCATGGCATGCAGTATGGGAACCGTTTTTGAATAGATTTTTAA
TGAGTTTTAGTTTGATTATATACAGAGCTAATTTCACCAGTATTTTAGCA
TTCAAGTTTGGTACTGATACATTGATGAATGGTTATATTCAATCTTTTAA
TGGTGCAACAAGTATGGCAACTGGATGGATGTTAGGAATTATCAGTAACT
TCTTCCCTAGCAATACATTAATGCATAATACATTTTCAATCATATTGGtc
atttctttgtttattttgagtGTAACACCATCATTATATATTTACGTATT
ATGTATAATTCCTCTATGCGTATCATCTTCAGTCTTAAGAGTTACAAATG
GAACTGCTATTGCTAATAGAGCTGGAGAGGAAGCAAGGGGACTTGTAATG
GGTCTTGCAGACACTCTTACTGCACTTGCCAGAGCATTTGGTCCCGCTAT
TGCTGGATTTGCATTGGAAGTAAGTTATGAAGCACCTGGTCTTTGTGCTG
CTACCTTTGCTTTGATTGGTACGTTGATTGGGTTGTATGCGAAATCAGAG
GCTACACGTATGTTACATGTGGAATagATGAAACCTCACGAATCTATCAT
TAAACTTGTCTGCATATCAGGATTTTTGGATTTATTTGGTGTTGCTATGG
TCTATCCCCAATTAGTCCATCGTGCAAAAGAGTTAGGGGCAAGCCCTCGC
AATATTGGAttatttggatcaatttatGGAACACTCCAGTTTTTTTCAAG
TCCTGTCATGgGGCAAATAAGTGATCACCTTGGACGAAGAAACGTGTTGA
TAGTTGCATTACTTGGGACAAGTTTGAGTTACTTCTTGTTGGGAACAGTT
GGAAGTATTTTGTTTCTTAGTTTAGCAAGGATTCCCTCAGGGATCTTTAA
ATTCAGTTCCGCCATGAACAAAGCATTCCTTGTGGATATGAACCCGCCAG
AATCGAGAGCTGGTGTTTTGGGTAAATTCAATGCAGCATCAAGTATAGGG
TTTGTTATTGGCCCAACTATTGCTGGATGGATGATGCAAACAAGTGGTGG
ATTTCAATTAGTTGCATATATTTCAGGAACTATTTTTATTATCAATGCAT
TATTTAATCACTTTGTCGTGTCAAAATATTTAGATACGCTTATTGATGTC
CAACAAAACAATCAGAGAGACAATGATAAAAAGCCAATATCATTATTTGC
TGCATTTAATGTTTTTCGGGATGCACAGAATGTACCATGGCATGCAGTAT
GGGAACCGTTTTTGAATAGATTTTTAATGAGTTTTAGTTTGATTATATAC
AGAGCTAATTTCACCAGTATTTTAGCATTCAAGTTTGGTACTGATACATT
GATGAATGGTTATATTCAATCTTTTAATGGTGCAACAAGTATGGCAACTG
GATGGATGTTAGGAATTATCAGTAACTTCTTCCCTAGCAATACATTAATG
CATAATACATTTTCAATCATATTGGtcatttctttgtttattttgagtGT
AACACCATCATTATATATTTACGTATTATGTATAATTCCTCTATGCGTAT
CATCTTCAGTCTTAAGAGTTACAAATGGAACTGCTATTGCTAATAGAGCT
GGAGAGGAAGCAAGGGGACTTGTAATGGGTCTTGCAGACACTCTTACTGC
ACTTGCCAGAGCATTTGGTCCCGCTATTGCTGGATTTGCATTGGAAGTAA
GTTATGAAGCACCTGGTCTTTGTGCTGCTACCTTTGCTTTGATTGGTACG
TTGATTGGGTTGTATGCGAAATCAGAGGCTACACGTATGTTACATGTGGA
ATagATGAAACCTCACGAATCTATCATTAAACTTGTCTGCATATCAGGAT
TTTTGGATTTATTTGGTGTTGCTATGGTCTATCCCCAATTAGTCCATCGT
GCAAAAGAGTTAGGGGCAAGCCCTCGCAATATTGGAttatttggatcaat
ttatGGAACACTCCAGTTTTTTTCAAGTCCTGTCATGgGGCAAATAAGTG
ATCACCTTGGACGAAGAAACGTGTTGATAGTTGCATTACTTGGGACAAGT
TTGAGTTACTTCTTGTTGGGAACAGTTGGAAGTATTTTGTTTCTTAGTTT
AGCAAGGATTCCCTCAGGGATCTTTAAATTCAGTTCCGCCATGAACAAAG
CATTCCTTGTGGATATGAACCCGCCAGAATCGAGAGCTGGTGTTTTGGGT
AAATTCAATGCAGCATCAAGTATAGGGTTTGTTATTGGCCCAACTATTGC
TGGATGGATGATGCAAACAAGTGGTGGATTTCAATTAGTTGCATATATTT
CAGGAACTATTTTTATTATCAATGCATTATTTAATCACTTTGTCGTGTCA
AAATATTTAGATACGCTTATTGATGTCCAACAAAACAATCAGAGAGACAA
TGATAAAAAGCCAATATCATTATTTGCTGCATTTAATGTTTTTCGGGATG
CACAGAATGTACCATGGCATGCAGTATGGGAACCGTTTTTGAATAGATTT
TTAATGAGTTTTAGTTTGATTATATACAGAGCTAATTTCACCAGTATTTT
AGCATTCAAGTTTGGTACTGATACATTGATGAATGGTTATATTCAATCTT
TTAATGGTGCAACAAGTATGGCAACTGGATGGATGTTAGGAATTATCAGT
AACTTCTTCCCTAGCAATACATTAATGCATAATACATTTTCAATCATATT
GGtcatttctttgtttattttgagtGTAACACCATCATTATATATTTACG
TATTATGTATAATTCCTCTATGCGTATCATCTTCAGTCTTAAGAGTTACA
AATGGAACTGCTATTGCTAATAGAGCTGGAGAGGAAGCAAGGGGACTTGT
AATGGGTCTTGCAGACACTCTTACTGCACTTGCCAGAGCATTTGGTCCCG
CTATTGCTGGATTTGCATTGGAAGTAAGTTATGAAGCACCTGGTCTTTGT
GCTGCTACCTTTGCTTTGATTGGTACGTTGATTGGGTTGTATGCGAAATC
AGAGGCTACACGTATGTTACATGTGGAATagATGAAACCTCACGAATCTA
TCATTAAACTTGTCTGCATATCAGGATTTTTGGATTTATTTGGTGTTGCT
ATGGTCTATCCCCAATTAGTCCATCGTGCAAAAGAGTTAGGGGCAAGCCC
TCGCAATATTGGAttatttggatcaatttatGGAACACTCCAGTTTTTTT
CAAGTCCTGTCATGgGGCAAATAAGTGATCACCTTGGACGAAGAAACGTG
TTGATAGTTGCATTACTTGGGACAAGTTTGAGTTACTTCTTGTTGGGAAC
AGTTGGAAGTATTTTGTTTCTTAGTTTAGCAAGGATTCCCTCAGGGATCT
TTAAATTCAGTTCCGCCATGAACAAAGCATTCCTTGTGGATATGAACCCG
CCAGAATCGAGAGCTGGTGTTTTGGGTAAATTCAATGCAGCATCAAGTAT
AGGGTTTGTTATTGGCCCAACTATTGCTGGATGGATGATGCAAACAAGTG
GTGGATTTCAATTAGTTGCATATATTTCAGGAACTATTTTTATTATCAAT
GCATTATTTAATCACTTTGTCGTGTCAAAATATTTAGATACGCTTATTGA
TGTCCAACAAAACAATCAGAGAGACAATGATAAAAAGCCAATATCATTAT
TTGCTGCATTTAATGTTTTTCGGGATGCACAGAATGTACCATGGCATGCA
GTATGGGAACCGTTTTTGAATAGATTTTTAATGAGTTTTAGTTTGATTAT
ATACAGAGCTAATTTCACCAGTATTTTAGCATTCAAGTTTGGTACTGATA
CATTGATGAATGGTTATATTCAATCTTTTAATGGTGCAACAAGTATGGCA
ACTGGATGGATGTTAGGAATTATCAGTAACTTCTTCCCTAGCAATACATT
AATGCATAATACATTTTCAATCATATTGGtcatttctttgtttattttga
gtGTAACACCATCATTATATATTTACGTATTATGTATAATTCCTCTATGC
GTATCATCTTCAGTCTTAAGAGTTACAAATGGAACTGCTATTGCTAATAG
AGCTGGAGAGGAAGCAAGGGGACTTGTAATGGGTCTTGCAGACACTCTTA
CTGCACTTGCCAGAGCATTTGGTCCCGCTATTGCTGGATTTGCATTGGAA
GTAAGTTATGAAGCACCTGGTCTTTGTGCTGCTACCTTTGCTTTGATTGG
TACGTTGATTGGGTTGTATGCGAAATCAGAGGCTACACGTATGTTACATG
TGGAATag

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_030405	XLOC_030405	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00047751-exon-scaffold_136-1491911889:72930..73261	TCONS_00047751-exon-scaffold_136-1491911889:72930..73261	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1510915933:72930..73261	TCONS_00047751-exon-scaffold_136-1510915933:72930..73261	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1575043694:72930..73261	TCONS_00047751-exon-scaffold_136-1575043694:72930..73261	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1491911889:86109..86240	TCONS_00047751-exon-scaffold_136-1491911889:86109..86240	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1510915933:86109..86240	TCONS_00047751-exon-scaffold_136-1510915933:86109..86240	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1575043694:86109..86240	TCONS_00047751-exon-scaffold_136-1575043694:86109..86240	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1491911889:86710..86839	TCONS_00047751-exon-scaffold_136-1491911889:86710..86839	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1510915933:86710..86839	TCONS_00047751-exon-scaffold_136-1510915933:86710..86839	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1575043694:86710..86839	TCONS_00047751-exon-scaffold_136-1575043694:86710..86839	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1491911889:87124..89024	TCONS_00047751-exon-scaffold_136-1491911889:87124..89024	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1510915933:87124..89024	TCONS_00047751-exon-scaffold_136-1510915933:87124..89024	Clytia hemisphaerica	exon
TCONS_00047751-exon-scaffold_136-1575043694:87124..89024	TCONS_00047751-exon-scaffold_136-1575043694:87124..89024	Clytia hemisphaerica	exon

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00047751-protein	TCONS_00047751-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_136	supercontig	scaffold_136:72930..89024 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.75371	1.86149	0.720454	0.618894	4.37416	2.92729	4.72883	5.58521	3.57031	4.17941	4.32394	3.61758	4.47957	4.09468	4.02732	3.96256	5.13786	5.13479	2.90359	3.02113	4.12643	4.58902	4.18169	4.52976	3.64913	4.78848	3.55383	2.49821	4.13412	3.80837

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001958	Tet-R_TetA/multi-R_MdtG
IPR011701	MFS
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005215	transporter activity

Blast

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BLAST of TCONS_00047751 vs. Swiss-Prot (Human)
Match: MFSD9 (Major facilitator superfamily domain-containing protein 9 OS=Homo sapiens GN=MFSD9 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 6.083e-52
Identity = 132/412 (32.04%), Postives = 215/412 (52.18%), Query Frame = 3

Query:  309 LVCI--SGFLDLFGVAMVYPQLVHRAKELGASPRNIGLFGSIYGTLQFFSSPVMGQISDHLGRRNVLIVALLGTSLSYFLLGTVGSILFLSLARIPSGIFKFSSAMNKAFLVDMNPPESRAGVLGKFNAASSIGFVIGPTIAGWMMQTSGGFQLVAYISGTIFIINALF----------------------NHFVVSKYLDTLIDVQQNNQRDNDKKPISLFAAFNV-FRDAQNVPWHAVWEPFLNRFLMSFSLIIYRANFTSILAFKFGTDTLMNGYIQSFNGATSMATGWMLGIISNFFPSNT---LMHNTXXXXXXXXXXXXXXTPSLYIYVLCIIPLCVSSSVLRVTNGTAIANRAGEEARGLVMGLADTLTALARAFGPAIAGFALEVSYEAPGLCAATFALIGTLI 1460
            L+C+   GFLDLFGV+MV P L    K LGASP   G+ GS YG LQ FSS ++G  SD +GRR+ L+  +L ++L Y LLG   ++    LAR+P+GIFK + ++++A L D+ P + R  V+G FN AS +GF++GP + G++ +   GF L A+I   +FI+NA                         H ++ +  DT+ +   + +    KK    +    +  R+ +N+ +  +W+ FL R LM+ ++++Y +NF   L  +FG    + GY+ S++       G  LG I   +  N+   L+H++  I+    L + S+ P++   VL    L  S+++ R           G +A G ++G+  ++TA+ R   P ++G A EVS   P    A  AL+   I
Sbjct:   46 LLCLYLVGFLDLFGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGRRSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSISRALLSDVVPEKERPLVIGHFNTASGVGFILGPVVGGYLTELEDGFYLTAFICFLVFILNAGLVWFFPWREAKPGSTEKGLPLRKTHVLLGRSHDTVQEAATSRRARASKKTAQPWVEVVLALRNMKNLLFSEMWDIFLVRLLMAMAVMLYYSNFVLALEERFGVRPKVTGYLISYSSMLGAVAGLALGPILRLYKHNSQALLLHSS--ILTCTLLLLYSLAPTMGAVVLSSTLLSFSTAIGRTCITDLQLTVGGAQASGTLIGVGQSVTAVGRIIAPLLSGVAQEVSPCGPPSLGAVLALVAIFI 455

The following BLAST results are available for this feature:

BLAST of TCONS_00047751 vs. Swiss-Prot (Human)

BLAST of TCONS_00047751 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFSD9	6.083e-52	32.04	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00047751 (transcript) - C. hemisphaerica