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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047673 ID=TCONS_00047673|Name=TCONS_00047673|organism=Clytia hemisphaerica|type=transcript|length=3140bp
ATTACATTTTCTGTGTGTATAACGCTGTGATCATAGAGAAGAGATATAAC
GAGTATCATCTATATTTCTcctcaacatttttttttgaactttgaaaacG
ACTTTAGATACCAATCTCGGAAAGTTAGTGATTAgcgttgaaaaaaaaac
attaatagtagtttcaaagaaaaatagaaGAAGAAATTATCTCGAAGAAA
TATCGATACTAAAGAGGAATAGAGACAGTAGATAACTCTTGTGAAATAAA
GAAGAAATTATTTCTTTACTTACAAACGATAAATAACAACATCACATAAG
CACGTAGTAGTAGTAGGAAATACGTACGAATTAGCGCTCGAGGCGTTTTC
ATAGTAATTCACACAAGAAATCGGATAAAAGAGAGAAAAGCCAGCACAAG
ACCGGATACATCGGGACAACAAATCGTAGATTGTTGTATTATATACATTA
GACAGGTAACGGAAGAAGCGGATTTCAAGATACCAAAAAGGAAtacattg
aaattctttttttgaagaaaacatTAAAACTACAGAGGATTTCTGNTTGT
TAAGCTGTAAAGACGAAAAAGGAGACCAttaaaaagactttcaaaacatt
AGAAGAAGAAGTCGAAGACATTTCATTGTGGTTAATTATGCAGGAAAGGA
CATTTGTTGTGATCGTCCTGATTTTATTCATTATTGCATACTTGGTAATC
GGGGCATTGATATTCCAACTTCTTGAATCCGATAACGAAAAAGAACTCCG
AAAAAAGTATTACGAATTATTTCGGGATTTAAAAAGGAATTATAATTTGA
CGAAAACATTAATGAAGGAAATTATGCGAGTTCACAAAGAAGCTTGTAGT
ATTGGTCTAATGAATCAAGCATCTGATAAATGGTCCTTCGCTGGTTCGTT
CTATTTTGCTGGCACTGTTCTGACTACTATAGGGTACGGTCACACAGCAC
CTTCTACAACATACGGTCGTTTATCATTCATCATTTACGCATTGACCAGT
ATTCCACTCAATATGTTATTACTCAATACCGCCTTAGAAGTCAGTGTGAC
GTCACTGACAAAANCGCATTGACCAGTATTCCACTCAACATGTTATTACT
CAATACCGCCTTAGAAGTCAGTGTGACGTCACTCACAAAGGCATTTAAAA
ACATTGTCTCCCGAAGCAAATACAGTCGCCCCAAAGAGAATAGCAATACA
GTGGAAATCAATATCAGAGGCGTACTTTTACTCGTGTTCATTATGTTCAT
ATGCAGTGTTGCTGGTACGGCAGCCATGTTTAAATATATCGAAGATTGGT
CATATTTTGAAGGTGTTTATTTCACTATTGTGTCTTTTACGACAGTTGGA
CTTGGAGATTATGTGCCTTTTAAGACAGCCTCTAATTACAATCATCATGA
AGTTTATCGTCTTCTGAATTTATTTGTCATTATCATCGGTAGCATCTTca
catatatttttctgaaTCTTCTGGCAACCATTTATAAAAACATGATACAC
CAGTTAGCAAGACAATCCTCTCTTGTGGATAAGCCAGAAAAACGTGTGAG
AGAGACTCCAGCTCTTGTTCGAGCAATACCACGCCGCAAAATGGGTATAT
CTAGAGTTAGCAGTATTTCGTCATCCGCAACAGCTAATGAAGGTAACCCA
ATGGGATCTTTTGCAGCTATACAAAGAGCTATTGATCGAATAAGAATCAA
AGCCGTTGATGACACGACCACTACTCATGGCAACGAACTAAAAGCAATGA
ATACTATCGAAGCGATCTTACAAAATGAATATCGAAAAATACAAGCACGG
CAAGGAGATAACCCAAGATCCAGATGGCACCGTGCGGCCGCCAAAGCTAG
ATTATCTAACCGTAGAAAACAAAGCGATGTATACAAAAGTGTTGTGTTTG
ATACGGCAAACCCAAGTATCGAATCTATATTAACACCGGCTAATTTTCCA
GAGCGTCGCATCTTACAAAAGTCTTTGTCCACTTTATCTGGAAAGAGGTT
ACAAAACAAAAGTCTAAGCACATTATCATGTAAAAGTCTACAAGATGCAA
TATTGAGACATGATTTAGCAAGTTTACAGGAAGTAGCGACAGAACATCAA
CCGAGTGCGTTTAATATCCAAGGCTTCAAGGAGAGTAAAGCTAAGCTATC
TATAACGCACGAGGAAGACTTAGAAAATGCTATAGCTTTTCAGGACATCC
TTCAAAGTCGGTTACAAGAGGAAGCAACGGGTGTAACCAGACAACAAGAC
ACTAACCCGTTTAATACTCTAGATCATGGAGAACCACATTATCTAACACC
GATAGCTAGTCGAGAAAGCAGCCCTTACAGTAAACGTCGGCGAACAAGCT
CATTGAGACATTACAGGAACAGTTTGAATAATAACAATTTGAACGTAGAA
GGATTGGATGAACTGACTTATGAAGAGATACTAAAGGAAAGAATGGAGCG
TCgacgaaaatcaacaaaatcaactTATTTATCATCAAACTGTAAATCAC
ATCGTTCTTCTTTAGCTGAATCAGATGATCTCCATATGGCGATGATGTCC
TCGAAAGCAATAGATTGTGCAGATCTCCAGGAAAACAATCTAAATGATGA
GCCAAGAGATCCTGTCAACGCTGGAAACTATTTCCAACATCCACCACTTA
TCAATAATAGCCCAATAGATGGTAACCAAGAATTGAATTATTTTCAATGT
CCAATCGAAATTGAAATACCATATTACCAATCAGAACAACAGGATGGTTC
ACCCGATATGGAAGAGGAAAGTTACCAAGAGACTCCGGGTGTAGGACCAT
CATATAATCATAGATATCAAGTTTCAAATAATAATGtacaaatcaatttt
caaaataaccaaCCGGATGGAAGTAGCTCGCGAATCAGCTGTGAAGTATT
TCACAAGTATAATATAtaaatgtaatatataatattgttATATAATTTAA
ATATTGTATAACTACTACGCGAAATtggataaaaaatgaaatttgccTAG
AAATACCTTTTTTTCTCCAATTCcgaaattaaaacttttaagCATCAAAG
CTTTGAAAAGCCTTAATAAACAAGGTTGGCAGAAAACTgggacaaatttt
attttcatctgGTATGCAATACAAGAATACTTATTGTTTG Run BLAST on NCBI protein sequence of TCONS_00047673-protein >TCONS_00047673-protein ID=TCONS_00047673-protein|Name=TCONS_00047673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=679bp
MVLRWFVLFCWHCSDYYRVRSHSTFYNIRSFIIHHLRIDQYSTQYVITQY
RLRSQCDVTDKXALTSIPLNMLLLNTALEVSVTSLTKAFKNIVSRSKYSR
PKENSNTVEINIRGVLLLVFIMFICSVAGTAAMFKYIEDWSYFEGVYFTI
VSFTTVGLGDYVPFKTASNYNHHEVYRLLNLFVIIIGSIFTYIFLNLLAT
IYKNMIHQLARQSSLVDKPEKRVRETPALVRAIPRRKMGISRVSSISSSA
TANEGNPMGSFAAIQRAIDRIRIKAVDDTTTTHGNELKAMNTIEAILQNE
YRKIQARQGDNPRSRWHRAAAKARLSNRRKQSDVYKSVVFDTANPSIESI
LTPANFPERRILQKSLSTLSGKRLQNKSLSTLSCKSLQDAILRHDLASLQ
EVATEHQPSAFNIQGFKESKAKLSITHEEDLENAIAFQDILQSRLQEEAT
GVTRQQDTNPFNTLDHGEPHYLTPIASRESSPYSKRRRTSSLRHYRNSLN
NNNLNVEGLDELTYEEILKERMERRRKSTKSTYLSSNCKSHRSSLAESDD
LHMAMMSSKAIDCADLQENNLNDEPRDPVNAGNYFQHPPLINNSPIDGNQ
ELNYFQCPIEIEIPYYQSEQQDGSPDMEEESYQETPGVGPSYNHRYQVSN
NNVQINFQNNQPDGSSSRISCEVFHKYNI Run BLAST on NCBI transcript from alignment at scaffold_133:362059..365622- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047673 ID=TCONS_00047673|Name=TCONS_00047673|organism=Clytia hemisphaerica|type=transcript|length=3564bp|location=Sequence derived from alignment at scaffold_133:362059..365622- (Clytia hemisphaerica)
ATTACATTTTCTGTGTGTATAACGCTGTGATCATAGAGAAGAGATATAAC
GAGTATCATCTATATTTCTCCTCAACATTTTTTTTTGAACTTTGAAAACG
ACTTTAGATACCAATCTCGGAAAGTTAGTGATTAGCGTTGAAAAAAAAAC
ATTAATAGTAGTTTCAAAGAAAAATAGAAGAAGAAATTATCTCGAAGAAA
TATCGATACTAAAGAGGAATAGAGACAGTAGATAACTCTTGTGAAATAAA
GAAGAAATTATTTCTTTACTTACAAACGATAAATAACAACATCACATAAG
CACGTAGTAGTAGTAGGAAATACGTACGAATTAGCGCTCGAGGCGTTTTC
ATAGTAATTCACACAAGAAATCGGATAAAAGAGAGAAAAGCCAGCACAAG
ACCGGATACATCGGGACAACAAATCGTAGATTGTTGTATTATATACATTA
GACAGGTAACGGAAGAAGCGGATTTCAAGATACCAAAAAGGAATACATTG
AAATTCTTTTTTTGAAGAAAACATTAAAACTACAGAGGATTTCTGNGTGG
ATTTTAAGGTACCAAAAAGGAATACATTGAAATTCTTTTTTTGAAGAAAA
CATTAAAACCTACAGAGGATTTCTAGTTGTTAAGCTGTAAAGACGAAAAA
GGAGACCATTAAAAAGACTTTCAAAACATTAGAAGAAGAAGTCGAAGACA
TTTCATTGTGGTTAATTATGCAGGAAAGGACATTTGTTGTGATCGTCCTG
ATTTTATTCATTATTGCATACTTGGTAATCGGGGCATTGATATTCCAACT
TCTTGAATCCGATAACGAAAAAGAACTCCGAAAAAAGTATTACGAATTAT
TTCGGGATTTAAAAAGGAATTATAATTTGACGAAAACATTAATGAAGGAA
ATTATGCGAGTTCACAAAGAAGCTTGTAGTATTGGTCTAATGAATCAAGC
ATCTGATAAATGGTCCTTCGCTGGTTCGTTCTATTTTGCTGGCACTGTTC
TGACTACTATAGGTAAGCTTTAACCTCCAGTAAAGATTCTAGAGTGTAAT
TTGGAAAAGTGTGGTAGAATTTAATCGTAAGTTTCGCCCAATTTTCTCGC
AGTTCGCTCACAAAATTATGTGCAACTAACGCCATCAGTGAATAACTCAG
GATTTGACTAAAACGGCCACATCTCTATCTCGCTATATCCGGGCTGTCGT
TTTCTCATTTTGATTTCAATTGTCTTTTCATATCTTATGTCCTTAGAGTC
TTCATGAGTTACTTTTATAAAGAGAGTCAACTTCTTATAAACTCCTCTGG
GAATCGAGCGTTACTTAGGTCTATTTACATTCCAAACTTCTCTATTTCCA
TTTTAGGGTACGGTCACACAGCACCTTCTACAACATACGGTCGTTTATCA
TTCATCATTTACGCATTGACCAGTATTCCACTCAATATGTTATTACTCAA
TACCGCCTTAGAAGTCAGTGTGACGTCACTGACAAAANCGCATTGACCAG
TATTCCACTCAACATGTTATTACTCAATACCGCCTTAGAAGTCAGTGTGA
CGTCACTCACAAAGGCATTTAAAAACATTGTCTCCCGAAGCAAATACAGT
CGCCCCAAAGAGAATAGCAATACAGTGGAAATCAATATCAGAGGCGTACT
TTTACTCGTGTTCATTATGTTCATATGCAGTGTTGCTGGTACGGCAGCCA
TGTTTAAATATATCGAAGATTGGTCATATTTTGAAGGTGTTTATTTCACT
ATTGTGTCTTTTACGACAGTTGGACTTGGAGATTATGTGCCTTTTAAGAC
AGCCTCTAATTACAATCATCATGAAGTTTATCGTCTTCTGAATTTATTTG
TCATTATCATCGGTAGCATCTTCACATATATTTTTCTGAATCTTCTGGCA
ACCATTTATAAAAACATGATACACCAGTTAGCAAGACAATCCTCTCTTGT
GGATAAGCCAGAAAAACGTGTGAGAGAGACTCCAGCTCTTGTTCGAGCAA
TACCACGCCGCAAAATGGGTATATCTAGAGTTAGCAGTATTTCGTCATCC
GCAACAGCTAATGAAGGTAACCCAATGGGATCTTTTGCAGCTATACAAAG
AGCTATTGATCGAATAAGAATCAAAGCCGTTGATGACACGACCACTACTC
ATGGCAACGAACTAAAAGCAATGAATACTATCGAAGCGATCTTACAAAAT
GAATATCGAAAAATACAAGCACGGCAAGGAGATAACCCAAGATCCAGATG
GCACCGTGCGGCCGCCAAAGCTAGATTATCTAACCGTAGAAAACAAAGCG
ATGTATACAAAAGTGTTGTGTTTGATACGGCAAACCCAAGTATCGAATCT
ATATTAACACCGGCTAATTTTCCAGAGCGTCGCATCTTACAAAAGTCTTT
GTCCACTTTATCTGGAAAGAGGTTACAAAACAAAAGTCTAAGCACATTAT
CATGTAAAAGTCTACAAGATGCAATATTGAGACATGATTTAGCAAGTTTA
CAGGAAGTAGCGACAGAACATCAACCGAGTGCGTTTAATATCCAAGGCTT
CAAGGAGAGTAAAGCTAAGCTATCTATAACGCACGAGGAAGACTTAGAAA
ATGCTATAGCTTTTCAGGACATCCTTCAAAGTCGGTTACAAGAGGAAGCA
ACGGGTGTAACCAGACAACAAGACACTAACCCGTTTAATACTCTAGATCA
TGGAGAACCACATTATCTAACACCGATAGCTAGTCGAGAAAGCAGCCCTT
ACAGTAAACGTCGGCGAACAAGCTCATTGAGACATTACAGGAACAGTTTG
AATAATAACAATTTGAACGTAGAAGGATTGGATGAACTGACTTATGAAGA
GATACTAAAGGAAAGAATGGAGCGTCGACGAAAATCAACAAAATCAACTT
ATTTATCATCAAACTGTAAATCACATCGTTCTTCTTTAGCTGAATCAGAT
GATCTCCATATGGCGATGATGTCCTCGAAAGCAATAGATTGTGCAGATCT
CCAGGAAAACAATCTAAATGATGAGCCAAGAGATCCTGTCAACGCTGGAA
ACTATTTCCAACATCCACCACTTATCAATAATAGCCCAATAGATGGTAAC
CAAGAATTGAATTATTTTCAATGTCCAATCGAAATTGAAATACCATATTA
CCAATCAGAACAACAGGATGGTTCACCCGATATGGAAGAGGAAAGTTACC
AAGAGACTCCGGGTGTAGGACCATCATATAATCATAGATATCAAGTTTCA
AATAATAATGTACAAATCAATTTTCAAAATAACCAACCGGATGGAAGTAG
CTCGCGAATCAGCTGTGAAGTATTTCACAAGTATAATATATAAATGTAAT
ATATAATATTGTTATATAATTTAAATATTGTATAACTACTACGCGAAATT
GGATAAAAAATGAAATTTGCCTAGAAATACCTTTTTTTCTCCAATTCCGA
AATTAAAACTTTTAAGCATCAAAGCTTTGAAAAGCCTTAATAAACAAGGT
TGGCAGAAAACTGGGACAAATTTTATTTTCATCTGGTATGCAATACAAGA
ATACTTATTGTTTG Coding sequence (CDS) from alignment at scaffold_133:362059..365622- >TCONS_00047673 ID=TCONS_00047673|Name=TCONS_00047673|organism=Clytia hemisphaerica|type=CDS|length=4080bp|location=Sequence derived from alignment at scaffold_133:362059..365622- (Clytia hemisphaerica)
GGTACGGTCACACAGCACCTTCTACAACATACGGTCGTTTATCATTCATC
ATTTACGCATTGACCAGTATTCCACTCAATATGTTATTACTCAATACCGC
CTTAGAAGTCAGTGTGACGTCACTGACAAAANCGCATTGACCAGTATTCC
ACTCAACATGTTATTACTCAATACCGCCTTAGAAGTCAGTGTGACGTCAC
TCACAAAGGCATTTAAAAACATTGTCTCCCGAAGCAAATACAGTCGCCCC
AAAGAGAATAGCAATACAGTGGAAATCAATATCAGAGGCGTACTTTTACT
CGTGTTCATTATGTTCATATGCAGTGTTGCTGGTACGGCAGCCATGTTTA
AATATATCGAAGATTGGTCATATTTTGAAGGTGTTTATTTCACTATTGTG
TCTTTTACGACAGTTGGACTTGGAGATTATGTGCCTTTTAAGACAGCCTC
TAATTACAATCATCATGAAGTTTATCGTCTTCTGAATTTATTTGTCATTA
TCATCGGTAGCATCTTCACATATATTTTTCTGAATCTTCTGGCAACCATT
TATAAAAACATGATACACCAGTTAGCAAGACAATCCTCTCTTGTGGATAA
GCCAGAAAAACGTGTGAGAGAGACTCCAGCTCTTGTTCGAGCAATACCAC
GCCGCAAAATGGGTATATCTAGAGTTAGCAGTATTTCGTCATCCGCAACA
GCTAATGAAGGTAACCCAATGGGATCTTTTGCAGCTATACAAAGAGCTAT
TGATCGAATAAGAATCAAAGCCGTTGATGACACGACCACTACTCATGGCA
ACGAACTAAAAGCAATGAATACTATCGAAGCGATCTTACAAAATGAATAT
CGAAAAATACAAGCACGGCAAGGAGATAACCCAAGATCCAGATGGCACCG
TGCGGCCGCCAAAGCTAGATTATCTAACCGTAGAAAACAAAGCGATGTAT
ACAAAAGTGTTGTGTTTGATACGGCAAACCCAAGTATCGAATCTATATTA
ACACCGGCTAATTTTCCAGAGCGTCGCATCTTACAAAAGTCTTTGTCCAC
TTTATCTGGAAAGAGGTTACAAAACAAAAGTCTAAGCACATTATCATGTA
AAAGTCTACAAGATGCAATATTGAGACATGATTTAGCAAGTTTACAGGAA
GTAGCGACAGAACATCAACCGAGTGCGTTTAATATCCAAGGCTTCAAGGA
GAGTAAAGCTAAGCTATCTATAACGCACGAGGAAGACTTAGAAAATGCTA
TAGCTTTTCAGGACATCCTTCAAAGTCGGTTACAAGAGGAAGCAACGGGT
GTAACCAGACAACAAGACACTAACCCGTTTAATACTCTAGATCATGGAGA
ACCACATTATCTAACACCGATAGCTAGTCGAGAAAGCAGCCCTTACAGTA
AACGTCGGCGAACAAGCTCATTGAGACATTACAGGAACAGTTTGAATAAT
AACAATTTGAACGTAGAAGGATTGGATGAACTGACTTATGAAGAGATACT
AAAGGAAAGAATGGAGCGTCGACGAAAATCAACAAAATCAACTTATTTAT
CATCAAACTGTAAATCACATCGTTCTTCTTTAGCTGAATCAGATGATCTC
CATATGGCGATGATGTCCTCGAAAGCAATAGATTGTGCAGATCTCCAGGA
AAACAATCTAAATGATGAGCCAAGAGATCCTGTCAACGCTGGAAACTATT
TCCAACATCCACCACTTATCAATAATAGCCCAATAGATGGTAACCAAGAA
TTGAATTATTTTCAATGTCCAATCGAAATTGAAATACCATATTACCAATC
AGAACAACAGGATGGTTCACCCGATATGGAAGAGGAAAGTTACCAAGAGA
CTCCGGGTGTAGGACCATCATATAATCATAGATATCAAGTTTCAAATAAT
AATGTACAAATCAATTTTCAAAATAACCAACCGGATGGAAGTAGCTCGCG
AATCAGCTGTGAAGTATTTCACAAGTATAATATATAAATGGTCCTTCGCT
GGTTCGTTCTATTTTGCTGGCACTGTTCTGACTACTATAGGGTACGGTCA
CACAGCACCTTCTACAACATACGGTCGTTTATCATTCATCATTTACGCAT
TGACCAGTATTCCACTCAATATGTTATTACTCAATACCGCCTTAGAAGTC
AGTGTGACGTCACTGACAAAANCGCATTGACCAGTATTCCACTCAACATG
TTATTACTCAATACCGCCTTAGAAGTCAGTGTGACGTCACTCACAAAGGC
ATTTAAAAACATTGTCTCCCGAAGCAAATACAGTCGCCCCAAAGAGAATA
GCAATACAGTGGAAATCAATATCAGAGGCGTACTTTTACTCGTGTTCATT
ATGTTCATATGCAGTGTTGCTGGTACGGCAGCCATGTTTAAATATATCGA
AGATTGGTCATATTTTGAAGGTGTTTATTTCACTATTGTGTCTTTTACGA
CAGTTGGACTTGGAGATTATGTGCCTTTTAAGACAGCCTCTAATTACAAT
CATCATGAAGTTTATCGTCTTCTGAATTTATTTGTCATTATCATCGGTAG
CATCTTCACATATATTTTTCTGAATCTTCTGGCAACCATTTATAAAAACA
TGATACACCAGTTAGCAAGACAATCCTCTCTTGTGGATAAGCCAGAAAAA
CGTGTGAGAGAGACTCCAGCTCTTGTTCGAGCAATACCACGCCGCAAAAT
GGGTATATCTAGAGTTAGCAGTATTTCGTCATCCGCAACAGCTAATGAAG
GTAACCCAATGGGATCTTTTGCAGCTATACAAAGAGCTATTGATCGAATA
AGAATCAAAGCCGTTGATGACACGACCACTACTCATGGCAACGAACTAAA
AGCAATGAATACTATCGAAGCGATCTTACAAAATGAATATCGAAAAATAC
AAGCACGGCAAGGAGATAACCCAAGATCCAGATGGCACCGTGCGGCCGCC
AAAGCTAGATTATCTAACCGTAGAAAACAAAGCGATGTATACAAAAGTGT
TGTGTTTGATACGGCAAACCCAAGTATCGAATCTATATTAACACCGGCTA
ATTTTCCAGAGCGTCGCATCTTACAAAAGTCTTTGTCCACTTTATCTGGA
AAGAGGTTACAAAACAAAAGTCTAAGCACATTATCATGTAAAAGTCTACA
AGATGCAATATTGAGACATGATTTAGCAAGTTTACAGGAAGTAGCGACAG
AACATCAACCGAGTGCGTTTAATATCCAAGGCTTCAAGGAGAGTAAAGCT
AAGCTATCTATAACGCACGAGGAAGACTTAGAAAATGCTATAGCTTTTCA
GGACATCCTTCAAAGTCGGTTACAAGAGGAAGCAACGGGTGTAACCAGAC
AACAAGACACTAACCCGTTTAATACTCTAGATCATGGAGAACCACATTAT
CTAACACCGATAGCTAGTCGAGAAAGCAGCCCTTACAGTAAACGTCGGCG
AACAAGCTCATTGAGACATTACAGGAACAGTTTGAATAATAACAATTTGA
ACGTAGAAGGATTGGATGAACTGACTTATGAAGAGATACTAAAGGAAAGA
ATGGAGCGTCGACGAAAATCAACAAAATCAACTTATTTATCATCAAACTG
TAAATCACATCGTTCTTCTTTAGCTGAATCAGATGATCTCCATATGGCGA
TGATGTCCTCGAAAGCAATAGATTGTGCAGATCTCCAGGAAAACAATCTA
AATGATGAGCCAAGAGATCCTGTCAACGCTGGAAACTATTTCCAACATCC
ACCACTTATCAATAATAGCCCAATAGATGGTAACCAAGAATTGAATTATT
TTCAATGTCCAATCGAAATTGAAATACCATATTACCAATCAGAACAACAG
GATGGTTCACCCGATATGGAAGAGGAAAGTTACCAAGAGACTCCGGGTGT
AGGACCATCATATAATCATAGATATCAAGTTTCAAATAATAATGTACAAA
TCAATTTTCAAAATAACCAACCGGATGGAAGTAGCTCGCGAATCAGCTGT
GAAGTATTTCACAAGTATAATATATAAATGGTCCTTCGCTGGTTCGTTCT
ATTTTGCTGGCACTGTTCTGACTACTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047673-exon-scaffold_133-1575043694:365077..365622 | TCONS_00047673-exon-scaffold_133-1575043694:365077..365622 | Clytia hemisphaerica | exon |
| TCONS_00047673-exon-scaffold_133-1575043694:364611..364996 | TCONS_00047673-exon-scaffold_133-1575043694:364611..364996 | Clytia hemisphaerica | exon |
| TCONS_00047673-exon-scaffold_133-1575043694:362059..364266 | TCONS_00047673-exon-scaffold_133-1575043694:362059..364266 | Clytia hemisphaerica | exon |
| TCONS_00047673-exon-scaffold_133-1510915933:365077..365622 | TCONS_00047673-exon-scaffold_133-1510915933:365077..365622 | Clytia hemisphaerica | exon |
| TCONS_00047673-exon-scaffold_133-1510915933:364611..364996 | TCONS_00047673-exon-scaffold_133-1510915933:364611..364996 | Clytia hemisphaerica | exon |
| TCONS_00047673-exon-scaffold_133-1510915933:362059..364266 | TCONS_00047673-exon-scaffold_133-1510915933:362059..364266 | Clytia hemisphaerica | exon |
| TCONS_00047673-exon-scaffold_133-1491911889:365077..365622 | TCONS_00047673-exon-scaffold_133-1491911889:365077..365622 | Clytia hemisphaerica | exon |
| TCONS_00047673-exon-scaffold_133-1491911889:364611..364996 | TCONS_00047673-exon-scaffold_133-1491911889:364611..364996 | Clytia hemisphaerica | exon |
| TCONS_00047673-exon-scaffold_133-1491911889:362059..364266 | TCONS_00047673-exon-scaffold_133-1491911889:362059..364266 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_133 | supercontig | scaffold_133:362059..365622 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013099 | K_chnl_dom |
Blast
BLAST of TCONS_00047673 vs. Swiss-Prot (Human)
Match: KCNKG (Potassium channel subfamily K member 16 OS=Homo sapiens GN=KCNK16 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.908e-17 Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 2
Query: 701 GALIFQLLESDNEKELRKKY-YELFRDLKRNYNLTKTLMKEIMRVHKEACSIGLMNQASD----KWSFAGSFYFAGTVLTTIGYGHTAPSTTYGRLSFIIYALTSIPLNMLLLN 1027
GA IFQLLE E + R ++ E R L+ L + M++ ++V EA G+ + + W F SF+FAGTV+TTIGYG+ APST G++ + YAL IPLN++ LN
Sbjct: 28 GATIFQLLERQAEAQSRDQFQLEKLRFLENYTCLDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFLN 141
The following BLAST results are available for this feature:
|
