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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047551 ID=TCONS_00047551|Name=TCONS_00047551|organism=Clytia hemisphaerica|type=transcript|length=593bp
cttttagtCAAGTGGTGcacttcagaaaaaaactacTTTTGTAATCAAAC
ACTATAAAAGAAGGCaagagaaacatttttcattcACTTAATAGTAAACA
CACCAACGAGCAACACATACCTCGAAAAATTCTCATTACAGAAACAAAAA
TATGGCATCATCAACGAAATTTCTATTCCAGGCTGCTCTGCTTTTCGTAT
TTATTGCCGTGGTTCACAGTGGACAAGATCTCTTTACCGgTCCACGGCCA
ACTTTCACCACAGCAACATCAACCGTCACACCGAAAAACAAATGTGCTCA
TGCCTGCAGAGACTTATCGATACCGATTGGCATCATGCGTTGCGCTAATT
GTACAAGAGTCAATTTCACTTTAAAGGACCTTGGAAAACCAACTTTTACC
CCCACGTTCACATGGGGTATTAAAATCACCAGACCTAACCAAAAAGTCAT
TACAAAACCAACAATAACAACAACCTTATCAAAGAGCTACGAAAGATTGT
GCAAGGAGTGCTTACAATACTCTATGAAACCAAAATTATGTCATCAAGTC
TGCCAAGCATGGTTAAACGCCCAAACCACACCAACCTTGGCAC Run BLAST on NCBI transcript from alignment at scaffold_131:189582..190432- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047551 ID=TCONS_00047551|Name=TCONS_00047551|organism=Clytia hemisphaerica|type=transcript|length=851bp|location=Sequence derived from alignment at scaffold_131:189582..190432- (Clytia hemisphaerica)
CTTTTAGTCAAGTGGTGCACTTCAGAAAAAAACTACTTTTGTAATCAAAC
ACTATAAAAGAAGGCAAGAGAAACATTTTTCATTCACTTAATAGTAAACA
CACCAACGAGCAACACATACCTCGAAAAATTCTCATTACAGAAACAAAAA
TATGGCATCATCAACGAAATTTCTATTCCAGGCTGCTCTGCTTTTCGTAT
TTATTGCCGTGGTTCACAGTGGACAAGATCTCTTTACCGGTAAGTTCAAT
TTTCCTTCACCTCATACATTTCTATCTATTTTTAATTCTACCCTCTTTAC
GCTGCTAGTGATATTTTCACACATCAGCCCCTATAACCCTACTGCCTAAC
GAATTTCCTGCCAGTATTGGCCGTAAATGATGCTGAATGAACACAGCAAT
AAAACTTAAAAGCATGAATCAAAACATCAATTGCTGTATTTAACACATTT
GAAAATTGCATTGAGTTCTTATCTTTAAATATTTTCCTTATTTTCAGGTC
CACGGCCAACTTTCACCACAGCAACATCAACCGTCACACCGAAAAACAAA
TGTGCTCATGCCTGCAGAGACTTATCGATACCGATTGGCATCATGCGTTG
CGCTAATTGTACAAGAGTCAATTTCACTTTAAAGGACCTTGGAAAACCAA
CTTTTACCCCCACGTTCACATGGGGTATTAAAATCACCAGACCTAACCAA
AAAGTCATTACAAAACCAACAATAACAACAACCTTATCAAAGAGCTACGA
AAGATTGTGCAAGGAGTGCTTACAATACTCTATGAAACCAAAATTATGTC
ATCAAGTCTGCCAAGCATGGTTAAACGCCCAAACCACACCAACCTTGGCA
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047551-exon-scaffold_131-1575043694:190194..190432 | TCONS_00047551-exon-scaffold_131-1575043694:190194..190432 | Clytia hemisphaerica | exon |
| TCONS_00047551-exon-scaffold_131-1575043694:189582..189935 | TCONS_00047551-exon-scaffold_131-1575043694:189582..189935 | Clytia hemisphaerica | exon |
| TCONS_00047551-exon-scaffold_131-1510915933:190194..190432 | TCONS_00047551-exon-scaffold_131-1510915933:190194..190432 | Clytia hemisphaerica | exon |
| TCONS_00047551-exon-scaffold_131-1510915933:189582..189935 | TCONS_00047551-exon-scaffold_131-1510915933:189582..189935 | Clytia hemisphaerica | exon |
| TCONS_00047551-exon-scaffold_131-1491911889:190194..190432 | TCONS_00047551-exon-scaffold_131-1491911889:190194..190432 | Clytia hemisphaerica | exon |
| TCONS_00047551-exon-scaffold_131-1491911889:189582..189935 | TCONS_00047551-exon-scaffold_131-1491911889:189582..189935 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_131 | supercontig | scaffold_131:189582..190432 - |
Blast
The following BLAST results are available for this feature:
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