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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047489 ID=TCONS_00047489|Name=TCONS_00047489|organism=Clytia hemisphaerica|type=transcript|length=1438bp
caaaatggcggctGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCA
TCAAGGTTTTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATG
ATCCTTGCAGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGA
GAATTTTACTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGG
acttaaaatcttcaaaaggacagaatgtttttaaaagattggCATCTTCA
TCTGATGTTATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGG
ACTTGGACCAAATACATTACTGGAATCAAATGAGAGGCTTATCTATACAC
GTTTAAATGGGTATGGTACAAAACCAACACCTCTTTCACAGAAAGCTGGA
CACGATATCAACTATTTAGCAATGACAGGTGTCTTGTCCATGTTGGGTca
gaaagGTAACAAACCTGAGCCACCGATCAATTTGCTTGGTGATTTTGCTG
GAGGAAGTATGATGGCTGTTATGGGAATAATGATGGCTTTGTTTGAAAGA
AGTGTTTCAGGAAAAGGCCAGGTTGTCGATGCGTCAATTACAGCGGGCGC
GTCTTACGTATCATCTTTTCTACACCGATCACGTGACATTGGTATTTGGT
TGGGTGAGCGAGGCACGAACGTCTTGGACGGAGGGGCTCCTTTTTATCAA
GTGTACCAAACGAAAGATGGAAAATATATGACAGTTGGGGCGATCGAACC
ACAATTTTATCAAGAACTTTTAAAAGGTCTTGATGCAGAGGATGATGAAA
CGTTATCTGTTCAAATGAACGTATTAGAGTGGCCTAAAATGAAAACCAAA
ATGGAAGACATTTTTGCTTCGAAGACGCAAGAAGAATGGTGCCAAGTCTT
TGAAGACAAAGATGCTTGCGTCACACCGGTGCTAGATTTTCTTGACGCTC
ACGAACACGCCCACAACAAGGCAGCTGGTTCGTTTATGTATAATCAAGAG
CACGGGCGTTATGAACCAACGCCCGCCCCTGAACTTTCTCGAACGCCCGC
GCGTGAGGAAATTTTGCCGGAACCGAATATAGGAGAACATACTGTCGAAT
ATTtgagaaatgagaattttacgAAAGCCGAGATTAACAAGTTATTAGAT
GAGGGTATTATCGAACAGTTTACACCAAAGGCATCTTTGTAATGGTCTCA
ACGAACGCTTTTCAAGAATTGTTGCTGAGACTTCATCACTAAGTATGCTG
GAGCAATTTGGGATACAATATTATGTTTTTAGCATTCTCTTTCgattgtt
atttttgattttgatttaattGTGCCGTCTCTAGAAGACTGGTGACttct
taaccctttccggacgcatgatttcacggctatatgacgcaaacaaaaat
tcgatttttgactGACTTTAcgaaaattgcaatagaaa Run BLAST on NCBI transcript from alignment at scaffold_13:106065..116782- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047489 ID=TCONS_00047489|Name=TCONS_00047489|organism=Clytia hemisphaerica|type=transcript|length=10718bp|location=Sequence derived from alignment at scaffold_13:106065..116782- (Clytia hemisphaerica)
CAAAATGGCGGCTGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCA
TCAAGGTTTTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATG
ATCCTTGCAGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGA
GAATTTTACTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGG
ACTTAAAATCTTCAAAAGGACAGAATGTTTTTAAAAGATTGGCATCTTCA
TCTGATGTTATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGG
ACTTGGACCAAATACATTACTGGAATCAAATGAGAGGCTTATCTATACAC
GTTTAAATGGTAAGAACTTCAATAAGTTGTTTGGAGAACGCGACAGCCTA
TTGAATAAGTTTGAATAAGGGGTCACTCACATATCGATTCTTCCCACGAC
TAACGTCAAATTGACGCGAAGGGGTGGGTGGGTTAGAGTCTTTGACGCTA
AGAAATTTCCCCAGAAATATCGATTTTTAATACGTTTATTCCGTGACAAA
TGTTACTTTCCACATTTCTTTTCCTATTTTTACATACCTAAATATTCGTT
CGCTTGCTATTTTACAAAAATTTTAACCGAAACAAACGGCCCGATGTTTA
CGTCTCGAGTTTCTTTGTTCAGACGGTCTGCACGGCCCTTGAATTTCGCC
GACGGTCGGTCTATTTTTTGTGAAATGCGGCTTTTCTGTTGATTTTGATT
ATGGAGATAATTAATTCCGGCAACTTTCTGAAAAAAGTTTGGAAATTATC
TCCATTATTTTTTAAATGTAAACTGCGTGAGCAAGCCGTAGCGAATTTAA
AGATGGCTGACGAAACAACGATNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATAATGACAC
GTCTAATGTAAAACAGGCTTTAAGATAGATCTTCGTGTGAAGCAAGCCTT
CTAATTTTCGTGACTTCGTGATTCTTTTACACTGAACCATAACAAACAAA
ATGGCGGCTGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCATCAA
GGTTTTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATGATCC
TTGCAGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGAGAAT
TTTACTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGACTT
AAAATCTTCAAAAGGACAGAATGTTTTTAAAAGATTGGCATCTTCATCTG
ATGTTATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGACTT
GGACCAAATACATTACTGGAATCAAATGAGAGGCTTATCTATACACGTTT
AAATGGTAGGAACTAAGTTGTTTGGAGAACGCGACACAGCCTATTGAATA
AGTTTGAATAACAAAGAAATTACTCCAAATAAATTACTTTCCCTCAGCCA
ATATAAAAATGTGATAAATTATTTTGTCTCTAGGCAGTTAGTCACACTAC
TAGCATCCCGCCAAGATGTGTATCAAAGATTAATGCTGCGAAAGCACTTT
ATCGTTTACTTCACTAGCAACCAAACAAAAGTTGTTATATAATTCTGTAT
AATTGTTCGACCTGGAGAAAAGTCAGTTTAAAAAAAAAAGCTTTCGAACT
GCTTTTTCAAATTTAATGTACCATTAGTTGGTCTAATATCGACATCCCTC
GTCCAATTCTGACACCCTTCTTTAGAGACAGGAATAATATGAAAGCTTGA
ATCACTGATTGAAAAAGGATTAATCCTCTGTGACCACTAAGCAAAGACAA
ACAGTTTCAACTTTTCTATCAATTTCAGCTGTTAAAAAGGGTGCCGGAAT
TAAAGGAGGGATGTCAACATTAGACCAAGTTACGGCACGGTACGATAGCT
CAAAATTCAAGTTAGGCGGCGGTCGAAAAATTGTTCTGTTCGCGTCGCAA
CAGGTGTTAAAAATGCATGCGGGCGGACGGCTGGTCGGAAAAATTCCCGT
TTTTTTTTAAATTGCTTCTGTAAGTCAGGGGCAGGTGGTGACACAAACAG
AACAATTTTCTGATGGTGGCCAGAGCGATCAAGAAAAAAGCTATACGTCA
AAAGAACAATTTGCCAGAAAATCAGGGGAAAATATGATGCGGGCGGGTGA
TGCGAATAGAACAATTTTTCGATGGCCGCCTTAGATCATCCTCTATACGA
TTAATAAAGAATGAACAAAAAATTTAAATCTTGAAGCTCACAATATTTCG
ACAAACCTGTAAACTTTTTTTTGGATGCACTCGGTACCGTCAACTGCTCT
AACTTGGGTTGATTGGTCAAAACATGGGACTGGTTGATATCTGGTCTGTA
TTTTCACTAACTCTTAAATCTCTTTGACGACAAATTTGTTTTCGTTTGAC
CAATTTAAGATATATTACATATTTTTACCAAAAAGTTGTTATCCCCCTTT
TTTTTATTTAATACCCCCTAAAAACTCAAAAGAAAATCTCTTATCCCCCC
TATGAACCCTTTCTTGAGAAGTTGGATCCCCTTAAAGAAGGGGGGGTTCA
CACTTATGGCTAAATAAAAAACTAAATCCTGGAATATCGAAGTTCCAGCC
GCACTGTTCTGCTAGCTTTCTCAGCTCAATCCTCAACCCGCGCAAAACTT
AGCAGCAGCAGATCATTCCAATGGAAGTTGTTAGAATGTTAGTTAACACC
AGCAGAGTAAACGCATGTTTGGACTATGTACCCTATGCTGCACAAAGCAC
TTAATCTAAAGTCCCCCAAAGCATGGCTTGGCAGCAGGTTTTAGGTGCCC
CCTAAGAATTCAGGTGACCCCTAAGATTTAGGTAACCCCTGGTTGCCAAA
TATTTTAGGTGCCCCCTAAGAATTCAGGTGACCCCTAAGATTTAGGTAAC
CCCTGGTTGCCAAATATTTTAGGTGACCCCTAAGTCAACACAGATTGCTT
GAAAATGCACTCAAAACATGCACTTATAAGACAATTATGACAAATTAAAA
AAGAAAAAACTTTGCATTTTGCAAAATAACCATTTTCGAAAAAATTATTG
GGGGCATAGCCCCCCTTGCCTCCCCCCCAGTTGCTACGGCACTGCAGATA
ATATATTAGATACCAAATTGTCAGTTTTTGAGCATTGCTTAGATTAAAAT
ATAAGATGAGAAAGTGCCAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTT
TTTGCAAAAGTTCTAGGAATGAAAATAAAGGGATAATGATAATTGAATAC
TATCCACTGATGATCCGCGGCACTATTGTAAAGCTAGAATCGCTTTGCGA
GCGTACTCATCGCTTGAGAAAATGATTGACAGATTAAATTTTTTCACCCC
CGCGGGTGTTCTGCGAGCGTTCTCAGCTCAATCCTTGGACCGCGCTAAAA
TGGTAGACTTTGACAGGTCATTTCGATGGAAGTTTTTTGAATGTTTACAA
GGCTCTTGACAGAAAATCCTTTGTTTTATTGTCAATGATGACAGTGCTGT
TATTAATTTTGTTAAATCTGACACATTGATGTTTGTAAGTGCACTTTGTA
GTTTTGATTGAAGAATCATATTCTGGTTTTCATGTTATTATTAGATGCTG
TTTTAGAGCTTTAGAGCTAGGCTGACCGGACGGTCGTAATCGATCGATTA
GTCAACGATGGGTATCGATGAGCAAGCGATTAATTTTGATTACCTTGTGG
TTCGACTATTATCAATTATTCATCGATTGTCTATCGATGAGTTATCGATT
GTTTGTTATCAATGAGCTATCGATCAATATCGATTACCTTAAAGCATCGA
TCTTATCGATCTTATCGATTTTACATTGATTATTATCGATTAGATTTTAA
AAAAGTAGACTTTTTCGATTCTTCCTTTTTGAACTTTTCTTGTTGATAGG
GACTTTTAATTTTATCGTATCGATGAATAGCAGAATGATGAATTAGAGAG
CATCAACTCAGTAACGTGGCCTGGCTCGACCTGCGTGGTTTTCACACAAA
CGCAATAATGAAAAATTTACCGCCAGATTTAGAAAAAATTATCACTCGAA
AAGAAAGAAATGGTGCACTAAGGCTTCACTTTTTCTTGCCGGAGCAAAAT
TGTCTATAATTAGCCCGCCATGCGATTTTTCTAACACTTTGCTGGTCTAT
TACTTCGTAATTGTATATTACGAAGTGACGTCAATCTTCCGACACGAAAT
CATGAGGGTAGGGATATAACGTTACTTACTCCAACAGGGCAAATTCAGGA
AAGTTAATGCTCGCGAAAATTTCTTAATCTTAAAAATCTATAAATCAATA
AATCAAATATATTTCAAGTTAAAAATTTTCCAAACATTAATAATAGTTTC
ATGCTGCTTACAGCAACAATCGTCAGATGTGAATGAAAATCAAAAACATA
CTCTTTCTTATCTACAGAAATTAAAAATTTAAAAAAATAGATTTAAGTGT
TAAAAAGTGATAAAATGATGCGTGCCTATTAAAAATAATTATCGAGTGTG
TTAAAAAAACAAAAGGAGTAAAATACTATTATTTGTCCGGTGGGACCTCT
TTAGAATCTGTAAAACTCCAAAATGGTAGTCGAAATCGCCAATCTCGGAG
TGTTAAAGAGTCTCTCTCTCTCAAAGGAAAACATCAGTTGGGAAAATTGC
ATGCATTTCAATATAAGAAACGCCGAATCTAAGATCATCGCAGCACCTTC
CGGGAATTGCGGTATGGACGAAATACTTTAGGCGTACAAATTTTCGCGAG
CAGAAACTTTCGCGAGGTCGAACAATTTCGTCATTGGGTTTGTTGCTTGA
GTCATTATGTAATGGTTTCCCTACTAATTTTTCGAGTCAAAATGGTACTG
ATCAGGAGAGGTAAATTGAAGATTTTATAAAAATCAGCTGTCATAAAAGT
ATTAAATAACGAGAATCTCATTTCTTTAAAGTATTGAAATAAAATTTTAA
AGAATTCGATAAAACCAATTTTTTTATGAAATGAAAACCGCCCCAAAAGT
ACTTTAACAAACAAAATTTTTCATTTCTTCATAATAGGGTATGGTACAAA
ACCAACACCTCTTTCACAGAAAGCTGGACACGATATCAACTATTTAGCAA
TGACAGGTGTCTTGTCCATGTTGGGTCAGAAAGGTTTGTTTTTGAAAAAT
TTTCACTTTTTTGATTTATATGCCCCAGTAAATCAGTCTTGAAACCTGAA
ATCTTTCTTATATTCCATCAACTATCTCTATCATTTAAGGCTTGGGGACA
CGAGAAGTTTTTTTCGCGTTGGTGCAATGCAACATGCTCCATCTCACCAA
CCTGAAGCGCTTTCTCGTGTCTAGTCGACAAAACTTTTAATAACATTTAT
GTGTTTCTCACTTTTGTCCCATGGACAAAATCAGCGTGTCTTTTGGGTAT
TTCCCTCACTTTTTGTCCCATAAAACCATAAAAGAAACCATGAGACATGC
ACTGTTTTCTTGTGTTGGTGAGATGGAGCATGTTGCATTGCGCCAATGCG
AAAAAAACTTCTTGTGTGCCCAAGCCTTTACTCTCGCGGAACTTTCATTT
CAAAGTTGGAAGGTTTGTTACAGTTGTTCCTATGACACACCTGATAAAGA
TTTATCATGGTTGGTGATAAGGGACGGGCTATAAAATCAATTTGTTTCTT
GATCTGATGGTTAAAACAGACTTCTGTGTTCCTATTTGGATTCTTTTAAA
ATTTGTAGCGAAAACTACTGTGATCCGCACGGCTTTAATTAACCTTTTTC
ATGGTTCTATTAATTCCATGCAATTTCTGTATTGCCTAATAAATCAATAA
GCTTTTTGGATACTTATAGCCTTATCGGCGACGTTCTTAAATACAAATGC
TAGAAAAAGCCAATNATTTCTCACTTTTGTCCCATGGACAAAATCAGCGT
GTCTTTTGGGTATTTCCCTCACTTTTTGTCCAATAAAACCATAAAAGAAA
CCATGAGACATGCACTGTTTTCTTGTGTTGGTGAGATGGAGCATGTTGCA
TTGCACCAATGCGAAAAAAACTTCTTGTGTGCCCAAGCCTTTACTCTCGC
GGAACTTTCATTTCAAAGTTGGAAGGTTTGTTACAGTTGTTCCGATGACA
CACCTGATAAAGATTTATCATGGTTGGTGATAAGGGACGGGCTATAAAAT
CAATTTGTTTCTTGATCTGATGGTTAAAACAGACTTCTGTGTTCCTATTT
GGATTCTTTTAAAATTTGTAGCGAAAACTACTGTGATCCGCACGGCTTTA
ATTAACCTTTTTCATGGTTCTATTAATTCCATGCAATTTCTGTATTGCCT
AATAAATCAATAAGCTTTTTGGATACTTATAGCCTTATCGGCGACGTTCT
TAAATACAAATGCTAGAAAAAGCCAATTTTATATTTTATTTATATCATGA
TATTTTTAGGTAACAAACCTGAGCCACCGATCAATTTGCTTGGTGATTTT
GCTGGAGGAAGTATGATGGCTGTTATGGGAATAATGATGGCTTTGTTTGA
AAGAAGTGTTTCAGGAAAAGGCCAGGTTGTCGATGCGTCAATTGTAAGTA
CCTTGATTGATTTTTCGACCTACCTTGGAGGTCCTTTAAATTAACCTTTC
TTCGTTCGTTCGTTCGTTCATCCGTCCTTTTGTTCGTCTGATGTGAACTT
TTCTCAGGATTGGCTTATTAGCTTTTCTGTTTTTTTTCATCATGATGTAA
AATGGTAATGTCGAAAATGTGAAAGAGCCCGATTTTCGAAAAAAGATTCC
CCTCCGGGAAAACCGGTTTTTAAGCATTTTCTCGAGATTTTATCATTAGT
TTTTTCTGAGTTTTTTCACTTTTCAATGAAATCTTGGTAGCCGGAACTTT
CTAAGAACCGCAACAGTCGAGAATCGCCGGAAAAATGGTTTTTCTTTAAT
TTCTCGAGTTGTATTTGTTGAGTTGGCATTTTCTTACTTTTGCTCCCATT
TTTTCTATTTTTTTATTACATCAGCCTTCAGGTAGGTCCATTCAACATGA
AACTTGTTCTAATTGATCTTAAAATTTATTCATGATAAGTATGGACCCCT
CTTAACCTCTCTATAATAACATTTGTAGAAACAAATCTTTAGGAATTTAC
TCTAACCCAATTACTGTATTACTTCAAATAAACGCCCCTCCTAAAAATCA
AAAAAATTGATAAACACCCGAGCGTTTATTCGAATTAATACGGTACACTG
ACATGATTTCCATTTTAAAGCCTTAAGAGACCCTAAGTACAGTGGAGTCT
CTTCAACTTGAACGTCTATGACGTCTCGAATGTCCCCTTAACTCGAAGTT
TTATTGACGGCCCTATCAGACGGCCTTATAAACCTCACTCCAAACTCCAA
ACATCGAACAAATTTGTGTTCCCCTTGTGTGTTCGAGTTATGGAGACTCA
ACTCGGATTGATTCTCCCAGATGAATTTGTAAGATTTATTAGCGTATAGC
TTCCTTTATCTGGAGAGAATTTTATTTTTCCACTTTATTACTGTGCAATT
ATTGCGAACGTAGCCTTCGTGAAGAGCATTTTTATTTATCTCAATGAGAC
TGTTCATCTAACATTTCCAGACCATCTAAAAAGAACGACAAATAACTATA
AAAAAGCGACAAAAAGAACGACAAATATTTAAAGAAAGACAAATTTCATA
TTTCGCCGTCCACAACCCCGACCGAAATTGACTGTACCACAGATTCATTC
CTCTTTCTTTATCACGGGAATTAACTGCATGTGGTTTAAAAGAACGGCAA
ATTACGCTTGCGTGTAGTTCTCTATTTGGGTGAACTGGAAACATTACATG
AACTAACTCCAATAACACCTTTTTGTAGACAGCGGGCGCGTCTTACGTAT
CATCTTTTCTACACCGATCACGTGACATTGGTATTTGGTTGGGTGAGCGA
GGCACGAACGTCTTGGACGGAGGGGCTCCTTTTTATCAAGTGTACCAAAC
GAAAGATGGAAAATATATGACAGTTGGGGCGATCGAACCACAATTTTATC
AAGAACTTTTAAAAGGTTTGTTAAATGTTTTTTGTATGTATGCGTGTTTT
TTATAAGCATTGCATTTATAAGCATATCAAGGCTCAAATAGGACAAAATT
TAAAACATATGCTTCATTACCCTTACCTTTATTTAGCTTGTCTTTTCAGG
ATTTTCGGAATTTCCCTAAAATTTAGCTTAGGATATAAACATCCTTCAGG
CATTTTTCAGCCTTTCCAACCTCTCGATCTAAGCATGCTTACGTGAGATT
ATAAAAAAAAATCATAATTATGATTTCTTTTTTTCAATTCTTAACTGCAC
TTTTCCTATAAAGTAAAAAAAATAAAAAAACATCTCTAGAAGGAAAAATA
TATATATATTAGAGCTATGTAGGAAGATAATCAAACTAAAATAAGGCACC
ACTAAACCGTTCAGAGTCAAGAATAAATTCAATGACAAGATTAAACATGA
CAAAAAGGAATCGATTTTATCCGTCAATATCTTTATTTTCTTATTACATT
TGGTAGGTCTTGATGCAGAGGATGATGAAACGTTATCTGTTCAAATGAAC
GTATTAGAGTGGCCTAAAATGAAAACCAAAATGGAAGACATTTTTGCTTC
GAAGACGCAAGAAGAATGGTGCCAAGTCTTTGAAGACAAAGATGCTTGCG
TCACACCGGTGCTAGATTTTCTTGACGCTCACGAACACGCCCACAACAAG
GCAGCTGGTTCGTTTATGTATAATCAAGAGCACGGGCGTTATGAACCAAC
GCCCGCCCCTGAACTTTCTCGAACGCCCGCGCGTGAGGAAATTTTGCCGG
AACCGAATATAGGAGAACATACTGTCGAATATTTGAGAAATGAGAATTTT
ACGAAAGCCGAGATTAACAAGTTATTAGATGAGGGTATTATCGAACAGTT
TACACCAAAGGCATCTTTGTAATGGTCTCAACGAACGCTTTTCAAGAATT
GTTGCTGAGACTTCATCACTAAGTATGCTGGAGCAATTTGGGATACAATA
TTATGTTTTTAGCATTCTCTTTCGATTGTTATTTTTGATTTTGATTTAAT
TGTGCCGTCTCTAGAAGACTGGTGACTTCTTAACCCTTTCCGGACGCATG
ATTTCACGGCTATATGACGCAAACAAAAATTCGATTTTTGACTGACTTTA
CGAAAATTGCAATAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047489-exon-scaffold_13-1575043694:116424..116782 | TCONS_00047489-exon-scaffold_13-1575043694:116424..116782 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1575043694:110100..110195 | TCONS_00047489-exon-scaffold_13-1575043694:110100..110195 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1575043694:108690..108823 | TCONS_00047489-exon-scaffold_13-1575043694:108690..108823 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1575043694:107218..107404 | TCONS_00047489-exon-scaffold_13-1575043694:107218..107404 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1575043694:106065..106726 | TCONS_00047489-exon-scaffold_13-1575043694:106065..106726 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1510915933:116424..116782 | TCONS_00047489-exon-scaffold_13-1510915933:116424..116782 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1510915933:110100..110195 | TCONS_00047489-exon-scaffold_13-1510915933:110100..110195 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1510915933:108690..108823 | TCONS_00047489-exon-scaffold_13-1510915933:108690..108823 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1510915933:107218..107404 | TCONS_00047489-exon-scaffold_13-1510915933:107218..107404 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1510915933:106065..106726 | TCONS_00047489-exon-scaffold_13-1510915933:106065..106726 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1491911889:116424..116782 | TCONS_00047489-exon-scaffold_13-1491911889:116424..116782 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1491911889:110100..110195 | TCONS_00047489-exon-scaffold_13-1491911889:110100..110195 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1491911889:108690..108823 | TCONS_00047489-exon-scaffold_13-1491911889:108690..108823 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1491911889:107218..107404 | TCONS_00047489-exon-scaffold_13-1491911889:107218..107404 | Clytia hemisphaerica | exon |
| TCONS_00047489-exon-scaffold_13-1491911889:106065..106726 | TCONS_00047489-exon-scaffold_13-1491911889:106065..106726 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_13 | supercontig | scaffold_13:106065..116782 - |
Blast
BLAST of TCONS_00047489 vs. Swiss-Prot (Human)
Match: AMACR (Alpha-methylacyl-CoA racemase OS=Homo sapiens GN=AMACR PE=1 SV=2) HSP 1 Score: 410.223 bits (1053), Expect = 1.771e-139 Identity = 201/385 (52.21%), Postives = 265/385 (68.83%), Query Frame = 2
Query: 35 LPLNGIKVLELAGLAPVPFTGMILADFGAKVCRVNRTNENFTLDSLSRGKQSICLDLKSSKGQNVFKRLASSSDVIIEPFRPGIMEKLGLGPNTLLESNERLIYTRLNGYGTKPTPLSQKAGHDINYLAMTGVLSMLGQKGNKPEPPINLLGDFAGGSMMAVMGIMMALFERSVSGKGQVVDASITAGASYVSSFLHRSRDIGIWLGERGTNVLDGGAPFYQVYQTKDGKYMTVGAIEPQFYQELLKGLDAEDDETLSVQMNVLEWPKMKTKMEDIFASKTQEEWCQVFEDKDACVTPVLDFLDAHEHAHNKAAGSFMYNQEHGRYEPTPAPELSRTPAREEILPEPNIGEHTVEYLRNENFTKAEINKLLDEGIIEQFTPKASL 1189
+ L GI V+EL+GLAP PF M+LADFGA+V RV+R + + L RGK+S+ LDLK +G V +RL SDV++EPFR G+MEKL LGP L N RLIY RL+G+G + + AGHDINYLA++GVLS +G+ G P P+NLL DFAGG +M +GI+MALF+R+ +GKGQV+DA++ G +Y+SSFL +++ + +W RG N+LDGGAPFY Y+T DG++M VGAIEPQFY+ L+KGL + DE L QM++ +WP+MK K D+FA KT+ EWCQ+F+ DACVTPVL F + H HNK GSF+ ++E P PAP L TPA +P IGEHT E L F++ EI +L + IIE KASL
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSRYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGS-FCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIKGLGLKSDE-LPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQD-VSPRPAPLLLNTPAIPSFKRDPFIGEHTEEILEEFGFSREEIYQLNSDKIIESNKVKASL 382
The following BLAST results are available for this feature:
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