TCONS_00047482 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047482
Unique NameTCONS_00047482
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3986

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047482 ID=TCONS_00047482|Name=TCONS_00047482|organism=Clytia hemisphaerica|type=transcript|length=3986bp
gttttagaaaacaaatgaaaaatcaatAAGATATAACAATATCTAACATA
GTTTACAATGACATAAAATCAAGTTCTTCTAGTTTTGATGCGTTATTGTT
GTGTGTATTTAAACTTCTATTGATGAGTGTCACATCATTATTAACAACGG
CTGCGACAACCTCCAAAAACAGCTCTGTGGCAAAAATTGCTACACATGAA
AGCAATGGAGTGGATGATGGTAAAAATTCTCCCCTGATCAAGAAACTACA
TAATCCTTCACAGCTTCAACAAAAACTTGCAAAGCAACTTCAGAAGTCAA
GGCAAACCAAAGCATACTCTTCCAAAGATCTGTACACTGGGAAGAAGAAC
TTTTCAACTGAAGAGCAAACTCCTTTAGTTTCAATAGAAAACAGCGATGA
AGATGAATTCGATTACATCAGTTTGAAGACAGAAGCAGAAACGGACGATG
AAGTCGTTCTCTTCAAACAACCCAGATCTGCTGCTACTAAATACAGGttt
tcaacaTCTGACGATTGCAAGGAACACCTTCTAAGAGATGGCTTTAGACT
GGACGAATTATCTGATGACGAAGATCTAGACTTGATTCCACCGAAAGCTG
ATAATGCAACATGGTGGTCTTGTGaaggaatgacgtcatcatgttCCATT
CAATAACAATGGGTATCGTCAATGCTTTTTTTCTTatacaaatacttttt
tatacGATGCAAGAAATATCCATGTAGTCGTTAATGTCGGAGCCTTGTAT
GTTTTAAATCAAGGTTTTCATCAAAGGGGAAatggaaaatattaaaaaga
gTTTCCAAATTTGTTAACCTTCGATAATGTTTACAAGAGATTTTACTGCA
GTAGGGGGGACTTTCGTAAGGTCAATCATAAggtgttttgttttaaatag
gTTTATTCTCGGCTACTTTATAGACACTCTGTTTGAGTTTCAAAGGTTAG
ATTTGCAGATATTAAGCTTTCCtgtaaaaatatctttcaaaaagcatGAC
ACTGTAAGGTTAACGGCTTTGGGAACTCTTTTTAAGCTTGTGTGACAATG
CATTCACAATCAAAAGAGTAGGTAGatttatataatatatttttaaaaag
agtaaTTGATACTTTTTTGTTACTAGAATAATGCAGTGTTAAGGCCGCTC
TCCACTTGCGCgtgctgcgatcgcactttttggctttaatccattttgct
tggaaaaaagattacgtcttaaaaatgtagcgcgcgctttaaactttttt
caaacgttacgtcagatcgcgccaatggagttgcttcatttttctttgac
CAATAGCATGGAAGCTtcgctcgaaaaagtgcgattgaagcgcgcgcaag
tggcgACCGGCCTTTATACAACAACAAGGAAATATTTTAGCACTTTTTAG
ATAACAGATCCTACATTGCACTCGCATCATTTTAACTATCATATACTGTA
GTTCAGTGagcttttattttcttttgactCTCGAATTGAAggtaacaatt
ttaaaaagggcaaaaaaatatcagaagGCCCTACTAGCAATTGGCAACaa
ggaaaaaataattattttttattgaaaaacttttcccAATATCCATAATT
Tcttaatatttcttttgattgaattttaccaattttgtcaatttgattga
aaataaatttttttgtaaataatggACATTTTGTAGgcatttttgttatt
ttctctcttattattattataagtaAACTCCAACTTTTTGTTTTACAATT
CTTTTTTTACTAGTTACTGttgacaaaaaaataacatattCAATCCTTGA
GTTATAGGCCAGCGTCCGAGGTTcagaaagttaacaaaccataccatttt
tggatactactaattcagggctatccagccgtgggaatgattttttctga
aaatgctcctagGAAANCTAGACTTGATTCCACCGAAAGCTGATAATGCA
ACATGGTGGTCTTGTGaaggaatgacgtcatcatgttCCATTCAATAACA
ATGGGTATTGTCAATACTTTTTTCTTATGCAAGTACTTTTTTATACGATG
CAAGAAATATCCATATAGTCGTTAATGTCGGAGCCTTGTATGTTTTAAAT
CAAGGTTTTCATAGGGAAATGAAAGATAttaaaaagaatttccaaaTTTG
TTAAcctttgataatgtttacaagaaacttTACTGCAGTAGATGGGACTT
TCATAAGGTCAATCGTAAGGTGTTTAGTTTTAAATAGGTTCATTCTCGGC
TACCTTAGAGGCACTCTGTTTGAGTGTTTGAGTTTCAAAGGTTAGACTTG
CAGCTGTCTCCtgtaaaaatatctttcaaaaagcatGATACTGTAAGGTC
AACAGCTTTGTGAACTTTTTTTAAGCTTGTGTGACAATACATACACAATG
GAAAGAGTAGGTAGatttatataatatattttttacaaagagTAATTGAT
AGTTTTTTGTTACTAGAATAATGCAgtgttaaggccggtctccacttgca
cgcgctgcgatcgcactttttggctttgattctttttgcttggaaaaaag
attacgtcataaaaatgtaacacatttcaactttttccaaacgtcatgat
tattacttctctcatttgaccgaaattcaatcccacaatccttttcgtct
taattcaaaagtcgtgaaagttattactttttctttgtaatcgagtgtaa
tttgcgtgcaagcgtaataaacgcaaaggttgatggaattgaatttcagt
caaacataaaaatcaatgtctatttttagattcgcgacggtatgctattg
aagcgcgcgcaagtaaAGACCGGTCTTTATACAACAACAAGGAAATATTT
TAGCACTTTTTAGATAACAGATCCTACATTGCACTCGCGTCATTTTAACT
ATCATATACTGTAGTTCAGTGagcttttattttcttttgactCTCGAATT
GCAGGTAACAAAtttaaaaagggcaaaaaaatatcagaagGCCCTACTAG
CAATTGGCAACAAGGGNTAACAAAtttaaaaagggcaaaaaaatatcaga
agGCCCTACTAGCAATTGGCAACAagggaaaaataattattttttattga
aaaacttttcccAATATCCATAATTTcttaatatttcttttgattgaatt
ttaccaattttgtcaatttgattgaaaataatttcttttgtaaataaTGG
ACATATTGTAGgcatttttgttattttctctcttattattattataagta
AACTCCAACTTTTTGTTTTACAATTCTTTTTTTACTAGTTACTgttgaca
aaaaaatcacataTTCAATCCTCGAGttaTCTTCTGTTAATTTATGATTA
Ttagttttgcatttttttttcattttgaatttttctacagttcatttctt
gaaattttgagcaGATTTTTTAGACCAATGCATTTTTTATTTGGCGATAT
ATAATTAGTAATAATTACTTTACACAACAATCATTAAAAGTGCTTGCCGA
ATAATTTTGATattaacctcgaacttttaaaATCTCGTGTAAAGGATTTT
AGTGCCTGCAAGATAACTTCATAGTGTATTTTTTTTCGTgtatagttttt
atttttcacttttttcttaaagAATTTTCCCAGAATTTCCCCTTTGtagt
ttaattttaaaaaacgattttaatttatttgttaTAGCACCTAAATTTGG
TAGTTGTTCTCAGATCTCTTCTGTCTTAACCTCCTTGATACTACTCGACT
AGCCTTTGGTACATTGTTCATATCACTGTCACAACCCTCACCTATTGCAT
TATCATGGCATTATGTAGACTGAAATCTGCCCCGTTAAATTCTTATTAGA
AGGAGTGATTGAAACTAAACTTCTATGACGAGCtccatcaaaacaaagtt
tcaaTACTTCAATACAAATGTTCTAAAAAATTGGCAATCTGCACGTTTGA
GACATTGCTTTTGAAGGGGAAAAGATATGATTAAAA
Run BLAST on NCBI

transcript from alignment at scaffold_13:120520..128796+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047482 ID=TCONS_00047482|Name=TCONS_00047482|organism=Clytia hemisphaerica|type=transcript|length=8277bp|location=Sequence derived from alignment at scaffold_13:120520..128796+ (Clytia hemisphaerica)
gttttagaaaacaaatgaaaaatcaatAAGATATAACAATATCTAACATA
GTTTACAATGACATAAAATCAAGTTCTTCTAGTTTTGATGCGTTATTGTT
GTGTGTATTTAAACTTCTATTGATGAGTGTCACATCATTATTAACAACGG
CTGCGACAACCTCCAAAAACAGCTCTGTGGCAAAAATTGCTACACATGAA
AGCAATGGAGTGGTAAGTTCTTCATCTGTTAATTCATTTTTTCTCCCAAA
TTTTCAGCCCATTAAAGACATTTCTGTAATTCTTGCAAATTCTGTAAAAC
AATCTGAAAAGGTAATTCACAACAGTtcgcaattaaaaaaaaattcttat
aagcAGAGTGTCGTTTAGATGAAAATACATTAACTCTTACTTTATCAATA
TACAATTATAttagaaagaaaatgtttaaaaatttaaGGTGTGGTTGTGT
TTAtgctaaaaagaaattttatctcTTTCAAAGGATGATGGTAAAAATTC
TCCCCTGATCAAGAAACTACATAATCCTTCACAGCTTCAACAAAAACTTG
GTAAGCAGTTTTCTTTCAATCAATGTTCGAACTTCTTCCAATTCAGATGG
ATTTCCGCCTCTGAGACTTGTATGTTTTTTCTAACTTAAAATTGTAACCT
TGGCCCTTCCTTGTAGTGGAAAAGGATCCTATCTAGAAAAGGAAAGGGCC
AATCTCTAAATTTTAAGATATAGCAAAGTAAAGAAAGATTAGTTTTCTCA
GACACTTAATTTGAGATTGTGAATGAAGAACTAATGGGTTAAATTTATCG
TTTAAGTTGTTGATTTTAAATTACTTTTCTCACATTTATTCAGCAAAGCA
ACTTCAGAAGTCAAGGCAAACCAAAGCATACTCTTCCAAAGATCTGTAAG
TAAATTTGCTTTCTTCATGCCTTTGGTCTGACAAATGTCGTAAAAGTTTG
TACTGATTTTCTCTCATCTTTCTACATTGATTTTTCTCAATATTGAAGCA
AACATTTTGAGAAGAGCGTTGATAAAAGTATAAGAAATAGAGTATGAAAA
TTCTGAATTCAAATCTTAATTTGATGCTAAAAACACAAGAGAATGGCTCA
TGACTTACCTTGTAAGTCTTGATGCCCttcagtgtgtcccaaaaaaggga
acaaatttttgtataaagtaAGATCCTCATGATTTATGGGGACTTGTATA
CTTAATATTTCGATCTCATAGACCTATTCAATTATCTTGTGAATTGAAAT
TCTATCGAACTGAAAAGAGAATTTTAATCTCATTTAAATCATTCTAAGCC
AAATTAAGATATgagttttactttttataaaaatttgtctGATTTTTTCG
GAACACACTGTACATAGCTTGAACGTTGAGAACAGAAATAATTGTTTCTG
TATTTCAGGTACACTGGGAAGAAGAACTTTTCAACTGAAGAGCAAACTCC
TTTAGTTTCAATAGAAAACAGGTTTATCTTTaaatatattcttaattttt
cgttcTCCAAAGAAAAGTTAGAACCTTCTATAGGATACAAAATTAGTTCA
CCTTTAGCTTTTACACAGTGTTCACGGTTTCAATCTAAGACGGATTTCTC
ccaaaatataaataaagaCTTTTCCACATTTGAAGTTTAGAAAAATCTAg
tattaaaatattgaaaatctgtGCAAATTTGTCGTTTGTCAAGTTCAGTC
TATTTTCCATTTGATATGAAAAAACTTTGCTTTAACACTGTTTACAGGGA
TTGGATATTAACCTTCCTTAAGGAAACTGATTTTTGGGAagtagaaaaaa
ttgtaaaaaaaaattgccaagaatttattttggcgtgTAACgtaactttt
gaattttggcTATAACTAATTTTGAGGAATGGTAGGGTAaatcaaaattc
gaaaattacaaaaaaagttaactacattttattttaatttataaatATTT
ATAAATTCGGAATGTCTTCCTTCGCCCCAATTAAGAAAATGTTTGCCACc
ctcgattttttattttctttatttgggATCGAGATGCAAACAAGCCTGCA
TGACTTGCAGTAATCCTAGGTCCAGTGACCGTAGcataaaggtagagcat
ccagctacggtgcgcaaggttgtgggttcgatccccagctgggtcatacc
aaagattcccaaaatggtacttgatgcctctctgcttgatgctcagcaac
taaagagacggatcaagtgtaagtggagaaatccagggaaaggagtggcg
ccctcccctaccttcgggtagacaactatacgaaaagggagccttcgggt
cgccctcgactgcagTCGCAAACGTACTACGTACGAATCCTAGGTCCAGT
CCTATGATCGTATTTAGCTTTCACGCTTCAAACACATACTGCTAAAAATA
ATgattgattttttataaaacttttcaGCGACGAAGATGAAATAatgatt
gatttttgaaaacttttcagTGATGAAGatgaaataataattgatttttg
aaaacttttcagCGATGAAGATGAATTCGATTACATCAGTTTGAAGACAG
AAGCAGAAACGGACGATGAAGTCGTTCTCTTCAAACAACCCAGATCTGCT
GCTACTAAATACAGGGTATATACAAAATACTAATAGGGTCTGTAGATACA
GGGTAAACAGTCTCGACTGTggtcgagcaatgatgatgaCAGGTTATTCT
ATATTCTATTTTACATGAATTTGATATAATGAAACTATGAATGACCAACT
TTGTAAATCTTTAGTATTTAACAAAGTCTTTCTTAGATTGCTCTACTCTT
TACTTTGTACAACACTTGATATTTATCAGCCAAATTTAAATTGAACCTTT
TCAGTTGAGCTGGATGTAAGCAAAGAAAACCATGTAAACAAAGTCTGTtt
cctttttttagttttcaacaTCTGACGATTGCAAGGAACACCTTCTAAGA
GATGGCTTTAGGTTGGTATCATGATGATTTGTATTCAAGCTTCAActaaa
taaaatttataataaAGTCTCTACTTTCGGACACTTTCAGGTATGACGGA
AAGGGATGAGTAGTTAGTTTGAGATTTTCTTTCTGTAGATAcctgataca
cgttttttataagaacatccaaatttttcaagcctttggatgttcttaac
tttttgagtttcaagccttaaattgttcttaacatgttcttgtttttccc
atttttttatgtaccgggtgacccacgaaaaagtataagagtttggaggg
taactgtgtctgaaaaaaattgaattttaactaaattattttttcatggt
aaagaggaaaggcaatcctaaattttgatgtatcattttttaattttgga
aaagtagttatcaagatatggaggtataaagtcaaaagtcattataaaaa
acagtcaaaaaacgtCATAAAAGACAGcatcaaattaattaattaacaaa
taaaaagaGACATCGAGTGAGAAacatattttgatttcttttaccgGAAG
GATTCAGAAAAGAATAACAAAGGTTGacaattcttttttaatcatattta
ttcatttggaaaagtactctcgggtacctaatagccgtccccccgctaat
taatttttcgaaaattttccacccagaacattcttattccaacccccccc
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagtt
aaaattcaatttttttcggacacatttaccctccaaactcttatactttt
tcgtgggtcacccggtattctTGTCTATTTgcctaagaaattggctgttt
tcgagtccgcaaagccttaaaatgttcttaacttactcttaacatttttg
ccatcgaagacttctgttcttacatagtttgttcttataaaaataggTGT
ATAGTCCTGAATAAAACCTTTGAATCTTATAACCTGTTACAAAGTTGAGT
TATCTCAATTTTAATTTCTCGCTATTTTCTTTCTAAAAGGGTTTAACTTA
TAGCTTGAATTTCTTAGCTTAGAAAAAATGTTaagcaaaaagattttatc
aagGACCATTAATACGTTCACTGCCgagccttttttagaaattggaAATT
TGACCTTATTTAAAGCTTGACTTTAGTGATGGCTTCAATGATCTCATTTT
TGCTTCAAATACCTTCAGATTGTAAACCAAACAACGCAAAACTTTGTTTA
TCCTGAATATgcaaaaataagtttttctATATAAGAAATTGAGGAAGGCC
CTTTGAAGTACTGTAGGTATTTTGACCCGTATactacgagtatactcgta
gtCAGCAGTGAACGTGTTAAAGGGATTTACAGGTTGAACATCCATCAAAC
CATCTGACTACCTCTTTAAATTTAGGATATCAAGTCTCTCTTGTTTAATC
ACCTTTACGACTCTTCATATCTTTTTTTTCGATTATATACCAAAACGCAT
TTGTGttaacaaaatatttatttttcttatttgattAGACTGGACGAATT
ATCTGATGACGAAGATCTAGACTTGATTCCACCGAAAGCTGATAATGCAA
CATGGTGGTCTTGTGaaggaatgacgtcatcatgttCCATTCAATAACAA
TGGGTATCGTCAATGCTTTTTTTCTTatacaaatacttttttatacGATG
CAAGAAATATCCATGTAGTCGTTAATGTCGGAGCCTTGTATGTTTTAAAT
CAAGGTTTTCATCAAAGGGGAAatggaaaatattaaaaagagTTTCCAAA
TTTGTTAACCTTCGATAATGTTTACAAGAGATTTTACTGCAGTAGGGGGG
ACTTTCGTAAGGTCAATCATAAggtgttttgttttaaataggTTTATTCT
CGGCTACTTTATAGACACTCTGTTTGAGTTTCAAAGGTTAGATTTGCAGA
TATTAAGCTTTCCtgtaaaaatatctttcaaaaagcatGACACTGTAAGG
TTAACGGCTTTGGGAACTCTTTTTAAGCTTGTGTGACAATGCATTCACAA
TCAAAAGAGTAGGTAGatttatataatatatttttaaaaagagtaaTTGA
TACTTTTTTGTTACTAGAATAATGCAGTGTTAAGGCCGCTCTCCACTTGC
GCgtgctgcgatcgcactttttggctttaatccattttgcttggaaaaaa
gattacgtcttaaaaatgtagcgcgcgctttaaacttttttcaaacgtta
cgtcagatcgcgccaatggagttgcttcatttttctttgacCAATAGCAT
GGAAGCTtcgctcgaaaaagtgcgattgaagcgcgcgcaagtggcgACCG
GCCTTTATACAACAACAAGGAAATATTTTAGCACTTTTTAGATAACAGAT
CCTACATTGCACTCGCATCATTTTAACTATCATATACTGTAGTTCAGTGa
gcttttattttcttttgactCTCGAATTGAAggtaacaattttaaaaagg
gcaaaaaaatatcagaagGCCCTACTAGCAATTGGCAACaaggaaaaaat
aattattttttattgaaaaacttttcccAATATCCATAATTTcttaatat
ttcttttgattgaattttaccaattttgtcaatttgattgaaaataaatt
tttttgtaaataatggACATTTTGTAGgcatttttgttattttctctctt
attattattataagtaAACTCCAACTTTTTGTTTTACAATTCTTTTTTTA
CTAGTTACTGttgacaaaaaaataacatattCAATCCTTGAGTTATAGGC
CAGCGTCCGAGGTTcagaaagttaacaaaccataccatttttggatacta
ctaattcagggctatccagccgtgggaatgattttttctgaaaatgctcc
tagGAAANCTAGACTTGATTCCACCGAAAGCTGATAATGCAACATGGTGG
TCTTGTGaaggaatgacgtcatcatgttCCATTCAATAACAATGGGTATT
GTCAATACTTTTTTCTTATGCAAGTACTTTTTTATACGATGCAAGAAATA
TCCATATAGTCGTTAATGTCGGAGCCTTGTATGTTTTAAATCAAGGTTTT
CATAGGGAAATGAAAGATAttaaaaagaatttccaaaTTTGTTAAccttt
gataatgtttacaagaaacttTACTGCAGTAGATGGGACTTTCATAAGGT
CAATCGTAAGGTGTTTAGTTTTAAATAGGTTCATTCTCGGCTACCTTAGA
GGCACTCTGTTTGAGTGTTTGAGTTTCAAAGGTTAGACTTGCAGCTGTCT
CCtgtaaaaatatctttcaaaaagcatGATACTGTAAGGTCAACAGCTTT
GTGAACTTTTTTTAAGCTTGTGTGACAATACATACACAATGGAAAGAGTA
GGTAGatttatataatatattttttacaaagagTAATTGATAGTTTTTTG
TTACTAGAATAATGCAgtgttaaggccggtctccacttgcacgcgctgcg
atcgcactttttggctttgattctttttgcttggaaaaaagattacgtca
taaaaatgtaacacatttcaactttttccaaacgtcatgattattacttc
tctcatttgaccgaaattcaatcccacaatccttttcgtcttaattcaaa
agtcgtgaaagttattactttttctttgtaatcgagtgtaatttgcgtgc
aagcgtaataaacgcaaaggttgatggaattgaatttcagtcaaacataa
aaatcaatgtctatttttagattcgcgacggtatgctattgaagcgcgcg
caagtaaAGACCGGTCTTTATACAACAACAAGGAAATATTTTAGCACTTT
TTAGATAACAGATCCTACATTGCACTCGCGTCATTTTAACTATCATATAC
TGTAGTTCAGTGagcttttattttcttttgactCTCGAATTGCAGGTAAC
AAAtttaaaaagggcaaaaaaatatcagaagGCCCTACTAGCAATTGGCA
ACAAGGGNTAACAAAtttaaaaagggcaaaaaaatatcagaagGCCCTAC
TAGCAATTGGCAACAagggaaaaataattattttttattgaaaaactttt
cccAATATCCATAATTTcttaatatttcttttgattgaattttaccaatt
ttgtcaatttgattgaaaataatttcttttgtaaataaTGGACATATTGT
AGgcatttttgttattttctctcttattattattataagtaAACTCCAAC
TTTTTGTTTTACAATTCTTTTTTTACTAGTTACTgttgacaaaaaaatca
cataTTCAATCCTCGAGttaTCTTCTGTTAATTTATGATTATtagttttg
catttttttttcattttgaatttttctacagttcatttcttgaaattttg
agcaGATTTTTTAGACCAATGCATTTTTTATTTGGCGATATATAATTAGT
AATAATTACTTTACACAACAATCATTAAAAGTGCTTGCCGAATAATTTTG
ATattaacctcgaacttttaaaATCTCGTGTAAAGGATTTTAGTGCCTGC
AAGATAACTTCATAGTGTATTTTTTTTCGTgtatagtttttatttttcac
ttttttcttaaagAATTTTCCCAGAATTTCCCCTTTGtagtttaatttta
aaaaacgattttaatttatttgttaTAGCACCTAAATTTGGTAGTTGTTC
TCAGATCTCTTCTGTCTTAACCTCCTTGATACTACTCGACTAGCCTTTGG
TACATTGTTCATATCACTGTCACAACCCTCACCTATTGCATTATCATGGC
ATTATGTAGACTGAAATCTGCCCCGTTAAATTCTTATTAGAAGGAGTGAT
TGAAACTAAACTTCTATGACGAGCtccatcaaaacaaagtttcaaTACTT
CAATACAAATGTTCTAAAAAATTGGCAATCTGCACGTTTGAGACATTGCT
TTTGAAGGGGAAAAGATATGATTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030244XLOC_030244Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047482-exon-scaffold_13-1491911889:120520..120731TCONS_00047482-exon-scaffold_13-1491911889:120520..120731Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1510915933:120520..120731TCONS_00047482-exon-scaffold_13-1510915933:120520..120731Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1575043694:120520..120731TCONS_00047482-exon-scaffold_13-1575043694:120520..120731Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1491911889:121003..121069TCONS_00047482-exon-scaffold_13-1491911889:121003..121069Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1510915933:121003..121069TCONS_00047482-exon-scaffold_13-1510915933:121003..121069Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1575043694:121003..121069TCONS_00047482-exon-scaffold_13-1575043694:121003..121069Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1491911889:121363..121414TCONS_00047482-exon-scaffold_13-1491911889:121363..121414Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1510915933:121363..121414TCONS_00047482-exon-scaffold_13-1510915933:121363..121414Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1575043694:121363..121414TCONS_00047482-exon-scaffold_13-1575043694:121363..121414Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1491911889:121928..121990TCONS_00047482-exon-scaffold_13-1491911889:121928..121990Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1510915933:121928..121990TCONS_00047482-exon-scaffold_13-1510915933:121928..121990Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1575043694:121928..121990TCONS_00047482-exon-scaffold_13-1575043694:121928..121990Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1491911889:123032..123134TCONS_00047482-exon-scaffold_13-1491911889:123032..123134Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1510915933:123032..123134TCONS_00047482-exon-scaffold_13-1510915933:123032..123134Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1575043694:123032..123134TCONS_00047482-exon-scaffold_13-1575043694:123032..123134Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1491911889:123431..123480TCONS_00047482-exon-scaffold_13-1491911889:123431..123480Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1510915933:123431..123480TCONS_00047482-exon-scaffold_13-1510915933:123431..123480Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1575043694:123431..123480TCONS_00047482-exon-scaffold_13-1575043694:123431..123480Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1491911889:125358..128796TCONS_00047482-exon-scaffold_13-1491911889:125358..128796Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1510915933:125358..128796TCONS_00047482-exon-scaffold_13-1510915933:125358..128796Clytia hemisphaericaexon
TCONS_00047482-exon-scaffold_13-1575043694:125358..128796TCONS_00047482-exon-scaffold_13-1575043694:125358..128796Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:120520..128796 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.99869	2.76673	10.1788	12.3921	8.23026	6.95403	8.32298	9.76207	5.19699	6.04219	3.63689	3.13858	3.50755	2.40882	3.07232	2.52854	4.93392	3.81674	2.89616	3.80996	4.60076	4.74887	3.78858	4.69295	3.7886	5.01936	6.04023	4.26282	4.37739	3.88802
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047482 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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