TCONS_00047474 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047474
Unique NameTCONS_00047474
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1565

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047474 ID=TCONS_00047474|Name=TCONS_00047474|organism=Clytia hemisphaerica|type=transcript|length=1565bp
GGGAATTGCAAGAGCGCATGCACGTTCGAATACGACCCACGTTGCGCTTC
CAACGGTCGAACATACGATAACAACTGTCTTCTATCCATTGCACATTGTC
ATGATTCAAACGTCAAATTCAAACATTGGGGACGTTGCGGTACTTGTTCT
GAAAAGTGTCCAAGAAATATTGATTACGTTTGTGGTTCAGACGGGAAGAC
TTATGCCAACGAATGTGAATTGAATAAACAAAGATGTTACCATGATCGAA
ACCTTCGCAAACAATCTCCTGGTCGATGTGTCGTTGAGATGGAATTCATC
GTCAAAGGTCAACTGGCTTTACCATATCAATTCAGAGGGAATCTTCCTGA
AGAAAGTTGCATGAAAGTGTTTGTAACCAAGGAAGTGTGTGGCTCCACTA
CTTCTTGCTTGGCATCAGTCAAAGGAGTCTTGACAACCAAACAACCAAAT
ATAAGATACAACCAGATTGATTATCAACTGACGGTCAACGAACAACCTGG
AATGTATTATCTTAATGCACGCTTGTATCGAGGGTGGTGTCCGTCTTCGA
GAAACTATCAATTACGTGATGGAGATTTGTATAATCGAGACAAGGAGATT
GTTTACTTTCACCATAACGACAAGACGAAGAAAGTTCCGGTTATTAAAAT
GACTTATTTCGGAAATCCTGATCAAAACCAATGTGTAAAGCACTGTCGAT
TAGTGGAGGATTTTGTTTGTGGTACGGACAAAGTAACCTACACAAATCCT
TGTCTGTTGGCCATCAAAACATGTACATCCAATGGAGTGGTCAAGAAAGC
TCATAACGGAAAGTGTGGAAAGAAGCCTAAAGGAGATTGTGAACGCACCA
GTTATCCATACTCATGTTTACGCAGAGGATTTTATTGGTATTTTGATTAC
TACCTCAACCGCTGTATGCGCCGCTACGGCTGTCCTGGCTCCGCCAACAA
TTTCGTGAATGAAGAAACATGCCAAGCTACCTGTGCGAAGAATAAATGTG
ACATCCAGTGCAATGATTCACTCAATTACCCAGTCTGTGGAACAAATAAT
CTCACTTATTCAAACCGTTGTCAGTTGAAGAAAGCGGAATGCGAAATGAA
TGGGCGAGTCAAATTGGCTTACAATGGAAAGTGTAATGGACACCAAATCA
ATCGCCATGGTTAATCACACGACCGAAATATGACGTGATCGAatgatgat
gacgtcacttCGAGCTGTTCCAACATTCTAAGTATTTTaagggttatgat
ttttttatgattccAATTTTCTATGCGACCTTTTTAACCGTTATCGCCGG
CGATATATACTCAGTGAGATATAGAAGATGGCTACAGTTCTATGTAGGAT
TTGAAGTCAACTTTTTTCCTGCCTAGGTTTGCCGGGCCGCGTGGTTTTCA
TAAATCCAAAAACTGAGTAAAAAAGCTGCTAGTCTATATCTCATTGTGTA
CGCTTGCCATCGAGTAACTGTTCcgacttttttataaaaaattatacgAT
TACAATCTTTTAGAGATGAGgaacattattatttttttaaacattttata
cCCATATTATTTTAT
Run BLAST on NCBI

protein sequence of TCONS_00047474-protein

>TCONS_00047474-protein ID=TCONS_00047474-protein|Name=TCONS_00047474-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
GNCKSACTFEYDPRCASNGRTYDNNCLLSIAHCHDSNVKFKHWGRCGTCS
EKCPRNIDYVCGSDGKTYANECELNKQRCYHDRNLRKQSPGRCVVEMEFI
VKGQLALPYQFRGNLPEESCMKVFVTKEVCGSTTSCLASVKGVLTTKQPN
IRYNQIDYQLTVNEQPGMYYLNARLYRGWCPSSRNYQLRDGDLYNRDKEI
VYFHHNDKTKKVPVIKMTYFGNPDQNQCVKHCRLVEDFVCGTDKVTYTNP
CLLAIKTCTSNGVVKKAHNGKCGKKPKGDCERTSYPYSCLRRGFYWYFDY
YLNRCMRRYGCPGSANNFVNEETCQATCAKNKCDIQCNDSLNYPVCGTNN
LTYSNRCQLKKAECEMNGRVKLAYNGKCNGHQINRHG
Run BLAST on NCBI

transcript from alignment at scaffold_13:39845..46607+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047474 ID=TCONS_00047474|Name=TCONS_00047474|organism=Clytia hemisphaerica|type=transcript|length=6763bp|location=Sequence derived from alignment at scaffold_13:39845..46607+ (Clytia hemisphaerica)
GGGAATTGCAAGAGCGCATGCACGTTCGAATACGACCCACGTTGCGCTTC
CAACGGTCGAACATACGATAACAACTGTCTTCTATCCATTGCACATTGTC
ATGATTCAAACGTCAAATTCAAACATTGGGGACGTTGCGGTAAGTAGTGT
CTGTAAACGTGCATGTGGATTATTTTATGGTTcaatggagtctctttaac
tcgaacctctataactcgaatgtcacattaactcaaattttctggtccct
tcagttacaATGCCTCATATAAAACTTACTCCAAAACTCGAATTTCctta
ttttgaacaaatttgtgctcCCCGTGTGTGCTCGATTTGTGTTCAGCCGT
TTCTGTATCTGAGAAGCTATATCGATAATATAAAGATTGCTATGGAAAGT
TTTGCTTGATTTGCATTGAAACCAACACATTCCAACATTGATTTTGAATA
TCCACGAGGCCTTCGGGTCAAAAGGTTGTTATACCCTCTAATGATTTGTC
TGTAATTGTTACAATCTTTCCAAAATACTTAGGTACTTGTTCTGAAAAGT
GTCCAAGAAATATTGATTACGTTTGTGGTTCAGACGGGAAGACTTATGCC
AACGAATGTGAATTGAATAAACAAAGATGTTACCATGATCGAAACCTTCG
CAAACAATCTCCTGGTCGATGTGGTAAGTTCCGTTGCAATGAAGATATTG
ACAGTGTTGACTTTTCCATCTCAAAATTCTGCACAATTCACCGAAATTTA
AGAATATGTataatttgctgtgtaaaatgcattttccgtctcagttgaaa
aaccttgctttgaccacaGTATTACACCCCCTTCCCTTAGCCTTTTTAGG
GAGATCAGTCTTTTGATTCAGCCACAGCTATGCATAAGATTTGAAGAAGC
GATGAGTTAAATCGGGAATCCCTGGTTTGCCGTGGATTAAGTGTTATAAA
CCAGTCGGCCAAAACCATCATCCCTTGATAATTTTTTGGATAAGCTAATA
TTACCGTCCATACTTAGATTTTTAATTTGTCcctgaaaaataatatttgc
agaCGCTACTTcgatttttgtttgcttttattctTTGTGAATAAAAATTC
GTTTAAATTCTTCCGAATACAGTGTCCCGAAAAAGAGggcaaatttgaat
ataaagtaaaatcctgaAAACTCATTATCAAGTGTCCGagtcatgaaatt
tggcataaatTATAAGGACTTTGCTTTATATAAAAGTTTGTccacttttt
tcgggacacactgtattttttatttaaccagcaTAACTATTGTATTTCAG
TCGTTGAGATGGAATTCATCGTCAAAGGTCAACTGGCTTTACCATATCAA
TTCAGAGGGAATCTTCCTGAAGAAAGTTGCATGAAAGTGTTTGTAACCAA
GGAAGTGTGTGGCTCCACTACTTCTTGCTTGGCATCAGTCAAAGGAGTCT
TGACAACCAAACAACCAAATATAAGATACAACCAGATTGATTATCAACTG
ACGGTCAACGAACAACCTGGAATGTATTATCTTAAGTgggtgttttttta
ttttggttataCTGTTTTATTTTTCGGGGATTTTTTATCTGGTCCAAACC
AGTCAGGACGATGACACGTTTTTAACACTAAACTATTACGACCACAACTC
AAAACCGGTAAAGAGGGTAGAGGTAAAACTCTagctagaaaaaaaattgc
agtGGTAGTGTCTCGAGGAAACAACCGCCAAACTTGATCGGCTGTGAACA
TGCTTCGTTAGAGAAACCAAATCACGATACACCAAATTTTCTTGAATATT
TGTTTATCTTAAACTATAGCATAGTGTTCTATATTTCTAAAACCTATTTT
AGTGCACGCTTGTATCGAGGGTGGTGTCCGTCTTCGAGAAACTATCAATT
ACGTGATGGAGATTTGTATAATCGAGACAAGGAGATTGTTTACTTTCACC
ATAACGACAAGACGAAGAAAGTTCCGGTTATTAAAATGACTTATTTCGGA
AATCCTGGTAAGATGGACAGAAAGTGTACCTGAACCTGAAAtttaaataa
atgtttttaacaAGTATCATTGCTCTCTACATCGCCGATCCTCGTCCCCA
TGTaacccaggctttatttactttAATGATGGACGGCAGAGAATCTAGTG
CTATCGATAACCATAAAAAAGCTGACAGTACGCAGGAAACGAGGTTGTAC
ATCGCCCCTTTTTTGTTACTTTAGCACAAAAATAAATCGAGTGCAACTTC
GATCAAAAATAGCGGAAAAAGTTTAGTTCAGGAGCTCTAAGtctcttttc
tttctttaatattttttatcagATCAAAACCAATGTGTAAAGCACTGTCG
ATTAGTGGAGGATTTTGTTTGTGGTACGGACAAAGTAACCTACACAAATC
CTTGTCTGTTGGCCATCAAAACATGTACATCCAATGGAGTGGTCAAGAAA
GCTCATAACGGAAAGTGTGGTATGTTAACAGTGTTTTAGAGTTCTTCTTT
TATAGATTACGGAAAAATAAGTCGTTTCAGGTCTGGAGTTGATATATATT
TTCAGCTACCTCATCAGGTAGGTTTGAAATTGTTTTAAGTTTTTAGCTAG
TCTGAATCGTAGACCGCTGGTAGTATAAGGAGCATGAATCTTTCCAAGCT
ACAAGGTTTTTGCCTTGTAGCAAATAAGACAATATGTATGATGTAACCGT
GCAAAGACCCATTTTTAGAAGAtttcgactttggaaaatagttaagATGT
GTAATTTacctctagtttagacggcggactttctgccctgcctattctaa
ttattagagtaggcagaaagtggGCGCCAAGTCgacagttaaaatctttg
cttagaaaagattaaaataagtcattgcattgacgccAAAAGAGAGCAat
acattgactttagacagcccactttatgtccactctaattcacaattaga
atatgcagggcgaaaagtgggccatCTAAACTAGAGTTTACCCTCTTTCA
GGAAAGAAGCCTAAAGGAGATTGTGAACGCACCAGTTATCCATACTCATG
TTTACGCAGAGGATTTTATTGGTATTTTGATTACTACCTCAACCGCTGTA
TGCGCCGCTACGGCTGTCCTGGCTCCGCCAACAATTTCGTGAATGAAGAA
ACATGCCAAGCTACCTGTGGTAAGTGAAAATCGCTTTGGTTGATAACCCC
TATCAGATTCTATTTTTATGGTTAAAAAAAAGTGATAATGATtagtttat
tattcgttttattcTGGCCGAATATATGGTAAAATCTAATTCGACGTTCC
CACTCATTCATTTGAAAGGCGGTCTTTTAATACAGTTGTGGTTTGTACTT
GCGTGACGCGGTCCGAAAATACTTTTGACGGAAATCGAGCTTACAAGTTT
AGCTTGGAGAAAGATTTGAGgctatataaatattttttagtcgctcaatt
tcaaaatcttttggtCAATTGACCCGAAATTACTCGGAGAAGATAGACTT
TTTTTGTTGCTAAGtgctgaaaattttttattaaaaaaagattgGTAAGA
ACTACCCTTAATCGAGGGGCCAAAGTCCCATACATTCCTAAAGTCAATTC
GCTTTAAGTGTCACCCTTAAGCtttctattaaaaaatgaaatttagtgGA
GNCTAAAGTCAATTCGCTTTAAGTGTCACCCTTAagctttcttttaaaaa
atgaaaattagtgGAACACATACCATACAGGAGCAGTACAGGCTAAATAT
AATTTGTTGTGTTGTCATTTTCAGCGAAGAATAAATGTGACATCCAGTGC
AATGATTCACTCAATTACCCAGTCTGTGGAACAAATAATCTCACTTATTC
AAACCGTTGTCAGTTGAAGAAAGCGGAATGCGAAATGAATGGGCGAGTCA
AATTGGCTTACAATGGAAAGTGTAGtaagtatttttattttctttgagtG
TGTTTTTGTTTTGGTACAGTAAACCTGACATATTTGTTCGAGTTTGTGAA
Gggttgaaaatttaaaagaaacatttgatttttagaataataataatagt
atctaaaaaataagaaaataagattATGAAACTGAAGCGTGGTttccttt
gtttacatttgggtGCTGGTTACCATAGCGACTCAAAAAGGAGTGGTTAT
AAAGAGCTCTGTGACCAAGCTATCAAAATCGGCGTCGAATTGTTGAACCA
GAGTAAATCATGTATTGAAGTTGCTACAGCTGTCACCTCGCACCTTGAAA
ATAGTCCATTGACAAATGCGGGATTTGGTTCCAATTTAACTCAAGATGGT
AGCGTCGAGTGCGaggccgccattatggaatctAACGAAAATAAATTTGC
AGCTGTCGGGTGTGTAAAAGAAATTTGGAATCCAATTCAAGCTGCTGAAA
TCGTTTTAAGAGAGCAAAAGAGACATGATTTAGGGCTAGTTCCGCCCATG
GTATTAGTGGGCGACCACGTTGCTAAAAAAGCTAAGGAGATGAACTTGAA
GACGATAGAAAATAAAGTGCTCGTTTCAACAAAGGCTCAAAAggattttg
tgaaatttcaaaACCGTTTAAACGCGAGAAGTAGTGGAGGAAAAACTCTC
AAAAGAACAAGAGAAGGATCAAAAACAACCTTTGACGAATCTTCATcggt
caaacaatcaaaatttgacCCTTTGTCTAGTTATTCTGAATGCTCAACTA
TTAGAGCTGTTGATGTATTGGAATCACCGATTAACTCGAATGAAAGCCTA
CTCTCCAAAGAAGATGCCATTTCAAATGAGTTAAGTGAGACTTGTGAAGA
TTTGAGGAAGCACTCTGGATTGTTTGTGAATGACCAAAGTCGAAACTCCA
CCTTACAAACAGAGCTTAAACCACCAATAAGCTCTGCGCATTTTTCGGAC
ATTGATGTCTATTTTTCGGACACTGAAGACTTAATCAGTGACACTATCGG
AGTCATTTGTGTCGACCATGATTTCAATGTCGCTTCTGCAATCTCAAGCG
GTGGACTTGCAATGAAGCAACCTGGTCGTTTGGGGCCGTGCACGAGCTTC
GGAGCCGGATGTTGGTCCTTTACATATGATGAAAACACAACGATTTCCGC
ATGTTGTTCTGGTACGGGAGAGGCGATAATACGGACACACCTTGCTCAGA
ACGCGTGTGATTTCTTGTACCGTGATCCTGGGAATATACTGAAATTAGAT
TCCTTTATTAACGATTATTTCACTTCTTCAAGACTTGTACCTGATCACTT
GGAACCGAGGCTGTGTGGGTTGCTATTGGTAACGCTCAgtaaaaacaaag
atggtagaAAAGCTATGATTGACTTTCAATTGGTTCACACGGCTGATTCT
TTTTGTGTGAGCTGTATTTCTGCCGGTGAGAAGGAGGCAAATTTTATGAT
TTCTCGTTTGAAATCTGAAGAAAGGGTTGTAACAAAAgcctttcattttt
caatttgatCTTAAGATTGATCACCAATGTTTAAATTGATAGCCAAGCAA
GCTCAAAGATTCAGTAATACTTTTCTTCTTCCTAAATGTTTCTATAAAAA
GAGAGCTTGCTTGGCTACATGGTGAAAATTGTACATCTTTTTTTATAAcg
caaacattttttttgaaaaaattatgtggtattataattataattataat
CATCTTCCCCGTTTATTTAATGGAGTATTAAATATGATGGCTTTTAATAT
CTTCTAtgcccgggggtactaggtttgcgaggtaacgggtatgtccgagc
caaaaatcgaaaatcgaccctttagAGAGAGGACAAATTGGCGTTTTttg
gacccttagagagacttttctgaaaattcttatcgatttttgtccaaatt
ttggaaaatcacaaccttttgagagaggaaattttgaattttgtgatttt
tggacccttacagagactcaatttcttttttcccattttgcctaagtacc
ccccccccctgggcttCTATGTTTGCACAAAGAGAGGCAATGAGCTGTTC
CATTAAGAATCAATACAGGTGTTGGTCATTTTCAggtcaaaaagaaattc
ttggAATTCAGGGATACCTCCTGGAGAACTCCTGGAGAAAGGCAAAATTC
TCAATAAAGCTcttggacccccccccccccctatatgGATACACAATTAA
taataatttgaatttaaaatttttaactaTTACATGTAGCCgatagaatt
ttgaaaaattgcaagtGCTTAAAAGAAAATCTGTTTGAACTGATTTGGTA
TAGGCGCTTGCAATTTGTAGCCGCCTGTAGCTTAAGTGTCTCGTCTATTC
TACAagttttttgtatatatttttccaTAACAGATGGACACCAAATCAAT
CGCCATGGTTAATCACACGACCGAAATATGACGTGATCGAatgatgatga
cgtcacttCGAGCTGTTCCAACATTCTAAGTATTTTaagggttatgattt
ttttatgattccAATTTTCTATGCGACCTTTTTAACCGTTATCGCCGGCG
ATATATACTCAGTGAGATATAGAAGATGGCTACAGTTCTATGTAGGATTT
GAAGTCAACTTTTTTCCTGCCTAGGTTTGCCGGGCCGCGTGGTTTTCATA
AATCCAAAAACTGAGTAAAAAAGCTGCTAGTCTATATCTCATTGTGTACG
CTTGCCATCGAGTAACTGTTCcgacttttttataaaaaattatacgATTA
CAATCTTTTAGAGATGAGgaacattattatttttttaaacattttatacC
CATATTATTTTAT

Coding sequence (CDS) from alignment at scaffold_13:39845..46607+

>TCONS_00047474 ID=TCONS_00047474|Name=TCONS_00047474|organism=Clytia hemisphaerica|type=CDS|length=9312bp|location=Sequence derived from alignment at scaffold_13:39845..46607+ (Clytia hemisphaerica)
GGGAATTGCAAGAGCGCATGCACGTTCGAATACGACCCACGTTGCGCTTC
CAACGGTCGAACATACGATAACAACTGTCTTCTATCCATTGCACATTGTC
ATGATTCAAACGTCAAATTCAAACATTGGGGACGTTGCGGTACTTGTTCT
GAAAAGTGTCCAAGAAATATTGATTACGTTTGTGGTTCAGACGGGAAGAC
TTATGCCAACGAATGTGAATTGAATAAACAAAGATGTTACCATGATCGAA
ACCTTCGCAAACAATCTCCTGGTCGATGTGTCGTTGAGATGGAATTCATC
GTCAAAGGTCAACTGGCTTTACCATATCAATTCAGAGGGAATCTTCCTGA
AGAAAGTTGCATGAAAGTGTTTGTAACCAAGGAAGTGTGTGGCTCCACTA
CTTCTTGCTTGGCATCAGTCAAAGGAGTCTTGACAACCAAACAACCAAAT
ATAAGATACAACCAGATTGATTATCAACTGACGGTCAACGAACAACCTGG
AATGTATTATCTTAATGCACGCTTGTATCGAGGGTGGTGTCCGTCTTCGA
GAAACTATCAATTACGTGATGGAGATTTGTATAATCGAGACAAGGAGATT
GTTTACTTTCACCATAACGACAAGACGAAGAAAGTTCCGGTTATTAAAAT
GACTTATTTCGGAAATCCTGATCAAAACCAATGTGTAAAGCACTGTCGAT
TAGTGGAGGATTTTGTTTGTGGTACGGACAAAGTAACCTACACAAATCCT
TGTCTGTTGGCCATCAAAACATGTACATCCAATGGAGTGGTCAAGAAAGC
TCATAACGGAAAGTGTGGAAAGAAGCCTAAAGGAGATTGTGAACGCACCA
GTTATCCATACTCATGTTTACGCAGAGGATTTTATTGGTATTTTGATTAC
TACCTCAACCGCTGTATGCGCCGCTACGGCTGTCCTGGCTCCGCCAACAA
TTTCGTGAATGAAGAAACATGCCAAGCTACCTGTGCGAAGAATAAATGTG
ACATCCAGTGCAATGATTCACTCAATTACCCAGTCTGTGGAACAAATAAT
CTCACTTATTCAAACCGTTGTCAGTTGAAGAAAGCGGAATGCGAAATGAA
TGGGCGAGTCAAATTGGCTTACAATGGAAAGTGTAATGGACACCAAATCA
ATCGCCATGGTTAAGGGAATTGCAAGAGCGCATGCACGTTCGAATACGAC
CCACGTTGCGCTTCCAACGGTCGAACATACGATAACAACTGTCTTCTATC
CATTGCACATTGTCATGATTCAAACGTCAAATTCAAACATTGGGGACGTT
GCGGTACTTGTTCTGAAAAGTGTCCAAGAAATATTGATTACGTTTGTGGT
TCAGACGGGAAGACTTATGCCAACGAATGTGAATTGAATAAACAAAGATG
TTACCATGATCGAAACCTTCGCAAACAATCTCCTGGTCGATGTGTCGTTG
AGATGGAATTCATCGTCAAAGGTCAACTGGCTTTACCATATCAATTCAGA
GGGAATCTTCCTGAAGAAAGTTGCATGAAAGTGTTTGTAACCAAGGAAGT
GTGTGGCTCCACTACTTCTTGCTTGGCATCAGTCAAAGGAGTCTTGACAA
CCAAACAACCAAATATAAGATACAACCAGATTGATTATCAACTGACGGTC
AACGAACAACCTGGAATGTATTATCTTAATGCACGCTTGTATCGAGGGTG
GTGTCCGTCTTCGAGAAACTATCAATTACGTGATGGAGATTTGTATAATC
GAGACAAGGAGATTGTTTACTTTCACCATAACGACAAGACGAAGAAAGTT
CCGGTTATTAAAATGACTTATTTCGGAAATCCTGATCAAAACCAATGTGT
AAAGCACTGTCGATTAGTGGAGGATTTTGTTTGTGGTACGGACAAAGTAA
CCTACACAAATCCTTGTCTGTTGGCCATCAAAACATGTACATCCAATGGA
GTGGTCAAGAAAGCTCATAACGGAAAGTGTGGAAAGAAGCCTAAAGGAGA
TTGTGAACGCACCAGTTATCCATACTCATGTTTACGCAGAGGATTTTATT
GGTATTTTGATTACTACCTCAACCGCTGTATGCGCCGCTACGGCTGTCCT
GGCTCCGCCAACAATTTCGTGAATGAAGAAACATGCCAAGCTACCTGTGC
GAAGAATAAATGTGACATCCAGTGCAATGATTCACTCAATTACCCAGTCT
GTGGAACAAATAATCTCACTTATTCAAACCGTTGTCAGTTGAAGAAAGCG
GAATGCGAAATGAATGGGCGAGTCAAATTGGCTTACAATGGAAAGTGTAA
TGGACACCAAATCAATCGCCATGGTTAAGGGAATTGCAAGAGCGCATGCA
CGTTCGAATACGACCCACGTTGCGCTTCCAACGGTCGAACATACGATAAC
AACTGTCTTCTATCCATTGCACATTGTCATGATTCAAACGTCAAATTCAA
ACATTGGGGACGTTGCGGTACTTGTTCTGAAAAGTGTCCAAGAAATATTG
ATTACGTTTGTGGTTCAGACGGGAAGACTTATGCCAACGAATGTGAATTG
AATAAACAAAGATGTTACCATGATCGAAACCTTCGCAAACAATCTCCTGG
TCGATGTGTCGTTGAGATGGAATTCATCGTCAAAGGTCAACTGGCTTTAC
CATATCAATTCAGAGGGAATCTTCCTGAAGAAAGTTGCATGAAAGTGTTT
GTAACCAAGGAAGTGTGTGGCTCCACTACTTCTTGCTTGGCATCAGTCAA
AGGAGTCTTGACAACCAAACAACCAAATATAAGATACAACCAGATTGATT
ATCAACTGACGGTCAACGAACAACCTGGAATGTATTATCTTAATGCACGC
TTGTATCGAGGGTGGTGTCCGTCTTCGAGAAACTATCAATTACGTGATGG
AGATTTGTATAATCGAGACAAGGAGATTGTTTACTTTCACCATAACGACA
AGACGAAGAAAGTTCCGGTTATTAAAATGACTTATTTCGGAAATCCTGAT
CAAAACCAATGTGTAAAGCACTGTCGATTAGTGGAGGATTTTGTTTGTGG
TACGGACAAAGTAACCTACACAAATCCTTGTCTGTTGGCCATCAAAACAT
GTACATCCAATGGAGTGGTCAAGAAAGCTCATAACGGAAAGTGTGGAAAG
AAGCCTAAAGGAGATTGTGAACGCACCAGTTATCCATACTCATGTTTACG
CAGAGGATTTTATTGGTATTTTGATTACTACCTCAACCGCTGTATGCGCC
GCTACGGCTGTCCTGGCTCCGCCAACAATTTCGTGAATGAAGAAACATGC
CAAGCTACCTGTGCGAAGAATAAATGTGACATCCAGTGCAATGATTCACT
CAATTACCCAGTCTGTGGAACAAATAATCTCACTTATTCAAACCGTTGTC
AGTTGAAGAAAGCGGAATGCGAAATGAATGGGCGAGTCAAATTGGCTTAC
AATGGAAAGTGTAATGGACACCAAATCAATCGCCATGGTTAAGGGAATTG
CAAGAGCGCATGCACGTTCGAATACGACCCACGTTGCGCTTCCAACGGTC
GAACATACGATAACAACTGTCTTCTATCCATTGCACATTGTCATGATTCA
AACGTCAAATTCAAACATTGGGGACGTTGCGGTACTTGTTCTGAAAAGTG
TCCAAGAAATATTGATTACGTTTGTGGTTCAGACGGGAAGACTTATGCCA
ACGAATGTGAATTGAATAAACAAAGATGTTACCATGATCGAAACCTTCGC
AAACAATCTCCTGGTCGATGTGTCGTTGAGATGGAATTCATCGTCAAAGG
TCAACTGGCTTTACCATATCAATTCAGAGGGAATCTTCCTGAAGAAAGTT
GCATGAAAGTGTTTGTAACCAAGGAAGTGTGTGGCTCCACTACTTCTTGC
TTGGCATCAGTCAAAGGAGTCTTGACAACCAAACAACCAAATATAAGATA
CAACCAGATTGATTATCAACTGACGGTCAACGAACAACCTGGAATGTATT
ATCTTAATGCACGCTTGTATCGAGGGTGGTGTCCGTCTTCGAGAAACTAT
CAATTACGTGATGGAGATTTGTATAATCGAGACAAGGAGATTGTTTACTT
TCACCATAACGACAAGACGAAGAAAGTTCCGGTTATTAAAATGACTTATT
TCGGAAATCCTGATCAAAACCAATGTGTAAAGCACTGTCGATTAGTGGAG
GATTTTGTTTGTGGTACGGACAAAGTAACCTACACAAATCCTTGTCTGTT
GGCCATCAAAACATGTACATCCAATGGAGTGGTCAAGAAAGCTCATAACG
GAAAGTGTGGAAAGAAGCCTAAAGGAGATTGTGAACGCACCAGTTATCCA
TACTCATGTTTACGCAGAGGATTTTATTGGTATTTTGATTACTACCTCAA
CCGCTGTATGCGCCGCTACGGCTGTCCTGGCTCCGCCAACAATTTCGTGA
ATGAAGAAACATGCCAAGCTACCTGTGCGAAGAATAAATGTGACATCCAG
TGCAATGATTCACTCAATTACCCAGTCTGTGGAACAAATAATCTCACTTA
TTCAAACCGTTGTCAGTTGAAGAAAGCGGAATGCGAAATGAATGGGCGAG
TCAAATTGGCTTACAATGGAAAGTGTAATGGACACCAAATCAATCGCCAT
GGTTAAGGGAATTGCAAGAGCGCATGCACGTTCGAATACGACCCACGTTG
CGCTTCCAACGGTCGAACATACGATAACAACTGTCTTCTATCCATTGCAC
ATTGTCATGATTCAAACGTCAAATTCAAACATTGGGGACGTTGCGGTACT
TGTTCTGAAAAGTGTCCAAGAAATATTGATTACGTTTGTGGTTCAGACGG
GAAGACTTATGCCAACGAATGTGAATTGAATAAACAAAGATGTTACCATG
ATCGAAACCTTCGCAAACAATCTCCTGGTCGATGTGTCGTTGAGATGGAA
TTCATCGTCAAAGGTCAACTGGCTTTACCATATCAATTCAGAGGGAATCT
TCCTGAAGAAAGTTGCATGAAAGTGTTTGTAACCAAGGAAGTGTGTGGCT
CCACTACTTCTTGCTTGGCATCAGTCAAAGGAGTCTTGACAACCAAACAA
CCAAATATAAGATACAACCAGATTGATTATCAACTGACGGTCAACGAACA
ACCTGGAATGTATTATCTTAATGCACGCTTGTATCGAGGGTGGTGTCCGT
CTTCGAGAAACTATCAATTACGTGATGGAGATTTGTATAATCGAGACAAG
GAGATTGTTTACTTTCACCATAACGACAAGACGAAGAAAGTTCCGGTTAT
TAAAATGACTTATTTCGGAAATCCTGATCAAAACCAATGTGTAAAGCACT
GTCGATTAGTGGAGGATTTTGTTTGTGGTACGGACAAAGTAACCTACACA
AATCCTTGTCTGTTGGCCATCAAAACATGTACATCCAATGGAGTGGTCAA
GAAAGCTCATAACGGAAAGTGTGGAAAGAAGCCTAAAGGAGATTGTGAAC
GCACCAGTTATCCATACTCATGTTTACGCAGAGGATTTTATTGGTATTTT
GATTACTACCTCAACCGCTGTATGCGCCGCTACGGCTGTCCTGGCTCCGC
CAACAATTTCGTGAATGAAGAAACATGCCAAGCTACCTGTGCGAAGAATA
AATGTGACATCCAGTGCAATGATTCACTCAATTACCCAGTCTGTGGAACA
AATAATCTCACTTATTCAAACCGTTGTCAGTTGAAGAAAGCGGAATGCGA
AATGAATGGGCGAGTCAAATTGGCTTACAATGGAAAGTGTAATGGACACC
AAATCAATCGCCATGGTTAAGGGAATTGCAAGAGCGCATGCACGTTCGAA
TACGACCCACGTTGCGCTTCCAACGGTCGAACATACGATAACAACTGTCT
TCTATCCATTGCACATTGTCATGATTCAAACGTCAAATTCAAACATTGGG
GACGTTGCGGTACTTGTTCTGAAAAGTGTCCAAGAAATATTGATTACGTT
TGTGGTTCAGACGGGAAGACTTATGCCAACGAATGTGAATTGAATAAACA
AAGATGTTACCATGATCGAAACCTTCGCAAACAATCTCCTGGTCGATGTG
TCGTTGAGATGGAATTCATCGTCAAAGGTCAACTGGCTTTACCATATCAA
TTCAGAGGGAATCTTCCTGAAGAAAGTTGCATGAAAGTGTTTGTAACCAA
GGAAGTGTGTGGCTCCACTACTTCTTGCTTGGCATCAGTCAAAGGAGTCT
TGACAACCAAACAACCAAATATAAGATACAACCAGATTGATTATCAACTG
ACGGTCAACGAACAACCTGGAATGTATTATCTTAATGCACGCTTGTATCG
AGGGTGGTGTCCGTCTTCGAGAAACTATCAATTACGTGATGGAGATTTGT
ATAATCGAGACAAGGAGATTGTTTACTTTCACCATAACGACAAGACGAAG
AAAGTTCCGGTTATTAAAATGACTTATTTCGGAAATCCTGATCAAAACCA
ATGTGTAAAGCACTGTCGATTAGTGGAGGATTTTGTTTGTGGTACGGACA
AAGTAACCTACACAAATCCTTGTCTGTTGGCCATCAAAACATGTACATCC
AATGGAGTGGTCAAGAAAGCTCATAACGGAAAGTGTGGAAAGAAGCCTAA
AGGAGATTGTGAACGCACCAGTTATCCATACTCATGTTTACGCAGAGGAT
TTTATTGGTATTTTGATTACTACCTCAACCGCTGTATGCGCCGCTACGGC
TGTCCTGGCTCCGCCAACAATTTCGTGAATGAAGAAACATGCCAAGCTAC
CTGTGCGAAGAATAAATGTGACATCCAGTGCAATGATTCACTCAATTACC
CAGTCTGTGGAACAAATAATCTCACTTATTCAAACCGTTGTCAGTTGAAG
AAAGCGGAATGCGAAATGAATGGGCGAGTCAAATTGGCTTACAATGGAAA
GTGTAATGGACACCAAATCAATCGCCATGGTTAAGGGAATTGCAAGAGCG
CATGCACGTTCGAATACGACCCACGTTGCGCTTCCAACGGTCGAACATAC
GATAACAACTGTCTTCTATCCATTGCACATTGTCATGATTCAAACGTCAA
ATTCAAACATTGGGGACGTTGCGGTACTTGTTCTGAAAAGTGTCCAAGAA
ATATTGATTACGTTTGTGGTTCAGACGGGAAGACTTATGCCAACGAATGT
GAATTGAATAAACAAAGATGTTACCATGATCGAAACCTTCGCAAACAATC
TCCTGGTCGATGTGTCGTTGAGATGGAATTCATCGTCAAAGGTCAACTGG
CTTTACCATATCAATTCAGAGGGAATCTTCCTGAAGAAAGTTGCATGAAA
GTGTTTGTAACCAAGGAAGTGTGTGGCTCCACTACTTCTTGCTTGGCATC
AGTCAAAGGAGTCTTGACAACCAAACAACCAAATATAAGATACAACCAGA
TTGATTATCAACTGACGGTCAACGAACAACCTGGAATGTATTATCTTAAT
GCACGCTTGTATCGAGGGTGGTGTCCGTCTTCGAGAAACTATCAATTACG
TGATGGAGATTTGTATAATCGAGACAAGGAGATTGTTTACTTTCACCATA
ACGACAAGACGAAGAAAGTTCCGGTTATTAAAATGACTTATTTCGGAAAT
CCTGATCAAAACCAATGTGTAAAGCACTGTCGATTAGTGGAGGATTTTGT
TTGTGGTACGGACAAAGTAACCTACACAAATCCTTGTCTGTTGGCCATCA
AAACATGTACATCCAATGGAGTGGTCAAGAAAGCTCATAACGGAAAGTGT
GGAAAGAAGCCTAAAGGAGATTGTGAACGCACCAGTTATCCATACTCATG
TTTACGCAGAGGATTTTATTGGTATTTTGATTACTACCTCAACCGCTGTA
TGCGCCGCTACGGCTGTCCTGGCTCCGCCAACAATTTCGTGAATGAAGAA
ACATGCCAAGCTACCTGTGCGAAGAATAAATGTGACATCCAGTGCAATGA
TTCACTCAATTACCCAGTCTGTGGAACAAATAATCTCACTTATTCAAACC
GTTGTCAGTTGAAGAAAGCGGAATGCGAAATGAATGGGCGAGTCAAATTG
GCTTACAATGGAAAGTGTAATGGACACCAAATCAATCGCCATGGTTAAGG
GAATTGCAAGAGCGCATGCACGTTCGAATACGACCCACGTTGCGCTTCCA
ACGGTCGAACATACGATAACAACTGTCTTCTATCCATTGCACATTGTCAT
GATTCAAACGTCAAATTCAAACATTGGGGACGTTGCGGTACTTGTTCTGA
AAAGTGTCCAAGAAATATTGATTACGTTTGTGGTTCAGACGGGAAGACTT
ATGCCAACGAATGTGAATTGAATAAACAAAGATGTTACCATGATCGAAAC
CTTCGCAAACAATCTCCTGGTCGATGTGTCGTTGAGATGGAATTCATCGT
CAAAGGTCAACTGGCTTTACCATATCAATTCAGAGGGAATCTTCCTGAAG
AAAGTTGCATGAAAGTGTTTGTAACCAAGGAAGTGTGTGGCTCCACTACT
TCTTGCTTGGCATCAGTCAAAGGAGTCTTGACAACCAAACAACCAAATAT
AAGATACAACCAGATTGATTATCAACTGACGGTCAACGAACAACCTGGAA
TGTATTATCTTAATGCACGCTTGTATCGAGGGTGGTGTCCGTCTTCGAGA
AACTATCAATTACGTGATGGAGATTTGTATAATCGAGACAAGGAGATTGT
TTACTTTCACCATAACGACAAGACGAAGAAAGTTCCGGTTATTAAAATGA
CTTATTTCGGAAATCCTGATCAAAACCAATGTGTAAAGCACTGTCGATTA
GTGGAGGATTTTGTTTGTGGTACGGACAAAGTAACCTACACAAATCCTTG
TCTGTTGGCCATCAAAACATGTACATCCAATGGAGTGGTCAAGAAAGCTC
ATAACGGAAAGTGTGGAAAGAAGCCTAAAGGAGATTGTGAACGCACCAGT
TATCCATACTCATGTTTACGCAGAGGATTTTATTGGTATTTTGATTACTA
CCTCAACCGCTGTATGCGCCGCTACGGCTGTCCTGGCTCCGCCAACAATT
TCGTGAATGAAGAAACATGCCAAGCTACCTGTGCGAAGAATAAATGTGAC
ATCCAGTGCAATGATTCACTCAATTACCCAGTCTGTGGAACAAATAATCT
CACTTATTCAAACCGTTGTCAGTTGAAGAAAGCGGAATGCGAAATGAATG
GGCGAGTCAAATTGGCTTACAATGGAAAGTGTAATGGACACCAAATCAAT
CGCCATGGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030240XLOC_030240Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047474-exon-scaffold_13-1491911889:39845..39983TCONS_00047474-exon-scaffold_13-1491911889:39845..39983Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1510915933:39845..39983TCONS_00047474-exon-scaffold_13-1510915933:39845..39983Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1575043694:39845..39983TCONS_00047474-exon-scaffold_13-1575043694:39845..39983Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1491911889:40377..40517TCONS_00047474-exon-scaffold_13-1491911889:40377..40517Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1510915933:40377..40517TCONS_00047474-exon-scaffold_13-1510915933:40377..40517Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1575043694:40377..40517TCONS_00047474-exon-scaffold_13-1575043694:40377..40517Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1491911889:41145..41379TCONS_00047474-exon-scaffold_13-1491911889:41145..41379Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1510915933:41145..41379TCONS_00047474-exon-scaffold_13-1510915933:41145..41379Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1575043694:41145..41379TCONS_00047474-exon-scaffold_13-1575043694:41145..41379Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1491911889:41697..41851TCONS_00047474-exon-scaffold_13-1491911889:41697..41851Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1510915933:41697..41851TCONS_00047474-exon-scaffold_13-1510915933:41697..41851Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1575043694:41697..41851TCONS_00047474-exon-scaffold_13-1575043694:41697..41851Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1491911889:42167..42313TCONS_00047474-exon-scaffold_13-1491911889:42167..42313Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1510915933:42167..42313TCONS_00047474-exon-scaffold_13-1510915933:42167..42313Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1575043694:42167..42313TCONS_00047474-exon-scaffold_13-1575043694:42167..42313Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1491911889:42846..43013TCONS_00047474-exon-scaffold_13-1491911889:42846..43013Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1510915933:42846..43013TCONS_00047474-exon-scaffold_13-1510915933:42846..43013Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1575043694:42846..43013TCONS_00047474-exon-scaffold_13-1575043694:42846..43013Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1491911889:43619..43768TCONS_00047474-exon-scaffold_13-1491911889:43619..43768Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1510915933:43619..43768TCONS_00047474-exon-scaffold_13-1510915933:43619..43768Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1575043694:43619..43768TCONS_00047474-exon-scaffold_13-1575043694:43619..43768Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1491911889:46178..46607TCONS_00047474-exon-scaffold_13-1491911889:46178..46607Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1510915933:46178..46607TCONS_00047474-exon-scaffold_13-1510915933:46178..46607Clytia hemisphaericaexon
TCONS_00047474-exon-scaffold_13-1575043694:46178..46607TCONS_00047474-exon-scaffold_13-1575043694:46178..46607Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047474-proteinTCONS_00047474-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:39845..46607 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.59019	1.99006	0.859087	0.869465	6.73905	6.0502	5.71835	6.2037	3.15717	3.5563	4.34717	4.29521	41.6569	38.5989	5.83861	5.0062	5.10662	4.8315	19.8581	11.0303	3.25761	2.92427	6.98967	4.54713	5.11249	5.33995	2.29602	2.22066	5.28518	4.78638
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002350Kazal_dom
IPR002223Kunitz_BPTI
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004867serine-type endopeptidase inhibitor activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0004867 serine-type endopeptidase inhibitor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047474 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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