TCONS_00047243 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047243
Unique NameTCONS_00047243
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2642

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047243 ID=TCONS_00047243|Name=TCONS_00047243|organism=Clytia hemisphaerica|type=transcript|length=2642bp
GTTGACAAAACAGCTCATAAAAGACACACACAAACTCACCAGTGACCTCA
TACCTTATACGTACATCAGCATCTTTCAAGTAATTATGTCTGTAAGTGAC
CATGGTACTAAATACAGCTCGAATGGACAAAATCATTCCAATAATGGTGA
CACAGAACTATCAAACCTTGTTGATGATGTTGGACGCAATATACAGCAAA
TTATCCGAAAGACTGGTTTGATACAGAAACTAATTAATCAAAGAACGACA
CTTGAAAACGAAACTTTCGAAAGATTACAAAGcgagcaaaaaaatgcaaa
caaactGATCAAGGATACTTCTCTTCAATTTCAAATATTGGACAATCTTC
AAACTACAGACTTGGAAAACGCGAGACAGAAAAATATTCAACAGGAAAAA
TTAAAGCAGAACTTTTCTGACGTattgaagaattttcaaaaggTGCAAAA
ACTTGTTTCAGAGAAAGAAAAAACAGAAGTACAAAGAGCTCGAGCCTTAC
CAGTCGATGGAAATCACCACAAGGATGACAATTCTCGAATGTATGACAAC
CAACCACAATTACAAAGACAAACAGAAGCTGAACTTAGCCTGGATGAAAT
CAGGGAACGCGAAGCTGCTATCCGACAGTTAGAGTCTGATATTGTAGATG
TAAATgagattttcaaagatttgaCCATCATGGTTCACGAACAAGGAGAA
ACTCTTGACAGCATCGAAGCAAACGTTGAAACCGCTCTCACACATGTCCA
AGATGGAAATGATGGGCATCCCTGTCAACGTGGCTTGGACTCTGGAAAAA
TGTTTCTAGGAGCTAGATTCATTCAAAGAGAGGTTTTGAGGAAGATTTTA
AGGCGAAATGGTGGATATGTGTAAAACCAAAGTCCacgattttgagaaaa
aatatgtGCACGATGTTTACGATCGGTTATCCGTAGAAGAATCAAGTATC
GACAAAAACaagtgtaatttacagaccagacgtGGTAAATGCTGGAGAAG
AGTAATTCGTTTTTTGCAATCATTCCCGATGGATTCACTTATCGGTGATA
TTGGATTTGGAGATGGAAGATTTCTTGACGAATCACAAACCAGCATTTTC
GGAATCGAAAGGTGTATCCATTTATGTGAAGAAGCGAAAAAATCTAACGA
CAATATTGAAACAATAGGCAGTGACGTCACACAGTTACCATTTCGTTCGA
ATCTTTTTGACGGTTTGATATGCGTCGCTGTTTTGCACCACCTTGCTACT
AAGAGACGAAGAATAGACGCGTTCAAAGAATTGGGCCGTGTGATGAGGGT
CGGTGGACAGCTTTTGTTTACTGTATGTGCTATGGGTGACTACCAAGATC
AGTACGGTGGATGTGACGTTTTGATTCCTACTTCTCGAGTTCACCAAGAA
GAAGACTGCACCAAAGAAATACAAACTAACAAAAACAATACATCTCCGAA
CACAGATGCTATTCTCAAGAAAAACACACCAATAGGATCGCTAATCAGTG
AAACGAAAGAAAAACTTTGTTCCAACCTCTTCCCAGAaatacaatcatgg
ttgaaacataaaggaaaagataaaataacAAATAACTTGGGAATTAACCG
GAAAACTGACATTGAGGAAGAGCAGaaatattaccatatttttACTCAGA
ACGAAATAACGGATATTCTAGAATCAGTTGGAAATCTTGAAGTCACAGAG
ACACAGCATTATAAAGGTAGCTGGGTTTATATAGTGACTAAAACATCCTA
ACTCACATTGTTCAGAGTTTTTAAAAGCTCGGTTCATTATACAGTGTGTC
CGGAAAACAGAAGTTATAAATAGGGATTTCACCCGGGGGGCTGACCTTGA
CGGCAGACGGGGATGTGCCGcgggagtttgaaaagtggaccctgtcagat
atgaatgtttggtaaatttgggaccctgtcggaAGGAAAATCGAAACAAA
TTTCCCATTTTCatcctaaaaattttgatttccaccctgaaaattgtcaa
aaatgacCTAAAAGACGACCCTGTCAGgtacaaatgttaaaaattagtaa
atttgggaccctgtcagatatcttcagagcctaaaaaaagAAACCCTGAC
CAGTGACACGTCCCCGTTCCCAATATCGCCCGAGTGCCTCGACCAGGGAT
TTTCAATACCTAATCATccaaattgtttttcaaaaaataatttcattacG
TTTGAGAatagaaaatatatttatttttaaacataAGGAATTCCATTTTA
TTTCAATTGTTCTAAGCTCTGGCGATATTACGAGATTTTTAAACCACCCA
AAATCTATTTCCGTTTATTTTCTCGACACACTAAAATTCTCCGAACCATG
TCCATTGTAGATTTGATTTAAATCCGTATTTGCAATTTTGGAGATAGTAA
TCTTCATCCATAACGTTGAAACTACATTATCAGATCAGATTGGTTCTCCT
TCAGGtctttcttctttaaaattttgatttagtCATGGACCATTAGAAGG
TATTGCTAATTATGCTCACTACTAAATtgtattataattttttaacaaaa
caatttgtaaatcaattttaattttctaaCCAATTTATTgtaacaatgat
tttttttaattgtatttttgtaCATTAATCGGTAATCACtag
Run BLAST on NCBI

transcript from alignment at scaffold_123:460515..474806-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047243 ID=TCONS_00047243|Name=TCONS_00047243|organism=Clytia hemisphaerica|type=transcript|length=14292bp|location=Sequence derived from alignment at scaffold_123:460515..474806- (Clytia hemisphaerica)
GTTGACAAAACAGCTCATAAAAGACACACACAAACTCACCAGTGACCTCA
TACCTTATACGTACATCAGCATCTTTCAAGTAATTATGTCTGTAAGTGAC
CATGGTACTAAATACAGCTCGAATGGACAAAATCATTCCAATAATGGTAA
GTTTCAAGAGACAATATTTCACATTATATTTGTAGGGTTCGGTATTTAAA
TAATCGTGACATCTTTCATCAGTCATGGAACACAGTATTCTGCACCAGAG
TGTATCTCACGTTTATCGTTTTGTTTCTACGGCTATGAATTTTGAAATTA
GCCGTAGATATCGGGTCTGTGCACAGACTAGGAAGACACTAGGGTGTTCT
ATTCGAAGGTAATACGTATTTTAACTCATTTTAGAGTGCGGTTCAAGAAC
CACAATGGTCCCTCTACAATTAGCGATTGTTTCAATATTCTTGTCTACTA
TGCATACCTATGATATCTATTTCAAGGTGACACAGAACTATCAAACCTTG
TTGATGATGTTGGACGCAATATACAGCAAATTATCCGAAAGAGTAAGTAG
TTTTCTAAATAACGGGGATTTCAAATTTTCTTTATCAATCTTGTGAATGA
TAATACAACCTTTACTCAAATCAAGACAAAGGCATTGACCAGCTGTTAAA
GGGTTTTCAAAGGTTTATTTAGCGACCATAGTGCAGTGGTAGAGCATTCG
GCTACGTCGCGCAAGATTTCGGGTTCAGCCCCCCAGATGGGTCATACCAA
AGATCCTTGATGTCCCTCGCTTGATTCTCAGCAATTAAGAGAAGGATCAA
GGGTAGGTGGAGCAATCCTGGTGCCCTCCCCTACCTTGGGGTACGAGATA
ACTATCGAATAGGGAGCCTTTGGGTAGCTTCTGATTACAGTCGCAAACGC
GCAAACTTACTTATTTATCAACCGTTAGACGGGATAAATCTATTATTCTT
TTCTTTAGCTGGTTTGATACAGAAACTAATTAATCAAAGAACGACACTTG
AAAACGAAACTTTCGAAAGATTGTAAGTTCTAATTCGAAAAAGGGTATCT
CAACTTCTATAGGTAAACCTTCCAACTACCTTTGTGGCTGGATAGCTCAG
TCGGTAGAACATTCGCCTTTCAATCCAAGAATTCATGATATTCATGACGT
AATGTTTTCTTTTCTTTCCCCGGTTTTTGCCAGTAGTGGCAAATTTTATA
CAAGTTTTGTCTAGTTTAAATTTCCCACTACTGGCAAAAACCGGTGTATT
CCTGTAGAAAACATTACGTCATGAATATAATGAATTGTGGGTTCGATCCC
CGGTCACTGCCAACTCTTTGAATGAATAGCTTCGATTGGGTAATCTGATC
TAAGCGGTAAGTTACTGGGAGCTGTTAGAAGGTGTGGCGCCTCACCTCGG
CATTCTGTCCAGGTCTAGCGCAAATAGAAAGGGATATACCTTATTGGCCC
TTTTTACGCCGGCCCTTATTGGCGTTATTTTTGGGCACGTGGCGTAATAA
GGGTCGGCGTAAAAAGGGCCAAGATTTTGCAATTTTTACCTAAAAGTGGC
GTTAATTTTCGATCATTATTTCTCAATTTAAAGGATTTTATTAGGTATGA
TTCGAAGACAAAAATTATCCATTGTTTTACTCAATATCTAAGACCTCACG
AAATTCAGTGATTTTGAATGGAATTTTTAACAATTTACTACCGAAACATG
ACATTTTAATGTAAATTTTAAACATTATTTACTAATTTGAAGCATAAGTA
ACAATTTTTACAAATTTGGCATTATTAACGGCCCTAATTGACATAAGCCC
TAAATTAGACTGTGGTTGTAATAAGGGCCGGTGTAAAAGAAGCCGGTGTT
AAATTAGGGCCAGCGTTAAATTAGGGCTGGCGTAAAAAGGGCCGATAAGG
TAGTCTCTCTTACTCCCGGCCCTGCCGCCTAACGATCACTCCCGACTATC
GGCAATGGACTACAACATTTATATCTTTGAATTTCTAGACAAAGCGAGCA
AAAAAATGCAAACAAACTGATCAAGGATACTTCTCTTCAATTTCAAATAT
TGGACAATCTTCAAACTACAGACTTGGAAAACGCGGTAAGTTTATTTTGA
TGGAACTGACTGAGTGAGCTCAATCGGAACTGTTCTTTTTATTAGAGGGT
ATATTTGATAATGATATTTTGACGTACCTTATTACACGAATATAAGTATG
GAAGTATTCAACGGCCTTGAAATTAACACGCCAAAAATTAACACGAATTT
TATTGCTTTTTCAAGGAAACAATGGCTGGTTTTAATTAAGGGGGTTTTTA
TTAACATGAAATTTTTCAATTCGTGTTAATAAAATGACTAGTAATATTCG
TGTAATAAGGTTGCAAAGCAAGTTGTATATAACCTACATTTCCTACGATA
GAAACACATTGACTTCTTTTCATGTTCTTTTCTTTAGAGACAGAAAAATA
TTCAACAGGAAAAATTAAAGCAGAACTTTTCTGACGTATTGAAGAATTTT
CAAAAGGTGCAAAAAGTAAGATGCATTACTGCTTGATTGTGACAGCTTTA
TGCGAGAAAAAAATCGTTAATACCCATCGTTGTCATAAGGAGTCAAGCTG
GGGGTTTGGTTGTATCAGTGCTCGCCTGTGTTTTTGCCATAATTTTGTGA
ATTTTGTGAAAATCTCTGTCTTTGTGCTCGAGTAGGGTCCAATCCACAGC
ATGGTCGATTCCCACTGGAGAGCGAAGACAGAAGTGTTTTTAAGGCTGTC
TTAACTAATTATTTGGTCTATATCTTTCACCATCCCGAATATGAAGAACC
TATTTATTTTCCCTTGTATACAGCTTGTTTCAGAGAAAGAAAAAACAGAA
GTACAAAGAGCTCGAGCCTTACCAGTCGATGGAAATCACCACAAGGTAAT
GTCTCACACAACTCAAATGCTAAATTTATCGCGATACTCTCACTTCACGC
CAACCCTCGATGAAAAGTGTCAAAAATGTCAAAAATTTTTCAATCAAGAT
GTGTAGCTGTTGTTTTAGAATTATATAAAAATGTGAATTTTAGAGAAAAC
TCTAATCTGAGGGTATTTTCCCAGCCTAGTAAACCATTATTTTTAAGTTC
GAATTACAGAAGGCGAGACAGAAGGTTTCGAGTTATAAAGCTTGACTTTT
ATTCTCAAGTCCCGTCAAGAAGAATCGGTCATAATCTAAACCTTTCTGAG
GCTTTGACAAATTCAGATTTCCCTCTTCGATTTCGAACCAGGGAATGTCA
TCTGTATATCTTTCTACCCTTCTTTTATTCAGGATGACAATTCTCGAATG
TATGACAACCAACCACAATTACAAAGACAAACAGAAGCTGAACTTAGCCT
GGATGAAATCAGGGAACGCGAAGCTGCTATCCGACAGTTAGAGGTGAGAG
ATCTTTTTATTGTGAGGAGAGCACAGATATCATATTCTATTACACACTAG
ATAAACTAACTGCTCACAGATTTCCCGTGGAAGTGCCCGTGTCCCCGGGG
GGGGGGGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTACCCCCCCCCCCGGGCCCGTGTCCACT
TTTGAAGTAGGCTAGTCCGCCATGTTGTTTTCCAATTTACCTTAGATTTT
CGAACGTTAGAATTTCAAAACATTCGAATCAGCTCTAAATCAGGAGGCGC
TTCTTAAATACGGGTAGCCCGATCCACTCGATTAGTTAGAGATCAGTGGA
GGAGAGGTGTAACGTAGCATATTTTAAATTTTAATTGGATTGTAATAATA
TGGTTCTATCTGATACTCAGAAAAGAAACCCCTTCACGCTTTTTCTGGGA
ATCAGGATGAAAAATTTCCAAGTCGAAGAGAATATGTACTTGGAGTTATA
TTGATTTAACTTCCAATGTTTTCCACTACCCTTGAAATAAAGAGAATGAC
TTGCCAATGTCATCGTTATTTTATCTTTCTCTTTTAGTCTGATATTGTAG
ATGTAAATGAGATTTTCAAAGATTTGACCATCATGGTTCACGAACAAGGA
GAAACTCTTGGTAAGGTTTTGTGTACCTTAAACCAAGAAACTTGCTTAAA
ACGCTCTGTGTATATTGAAAATATGAAGTGCATATATTTCCATTAGTAAG
GATATAATATATCCTAAACGGCTAGAAATTCTTGGTAGAAAAGCGAAGCC
GGGATGGTTTTTGAGCAGTGTACTTTTTCCATTTGATTTTTAATTTCCTA
ATTGAGCTGAAATTGTTGGGTATTTCCCCTACCAGGGGCGAAATTTTGGT
CAGATTTTCAAATTTGTGGATATCGCACCAGGTCTGTGACACGTGGTTGT
CTTTTACAAATATCTTTGCTCTTGACCTTTTTTATTCAATGATATAATGG
CAAATCCACTTTTCGGACGAAGCTCAACCAAATGTCAATCTATCGCTATT
TTTCTAGACAGCATCGAAGCAAACGTTGAAACCGCTCTCACACATGTCCA
AGATGGAAATGGTATTATAGCAAAAGCTGTTCGACATCAAAACAAAGCTC
GGAAAAGGAAACTTATTCTTGCTATAATTATTTTAATTGTGGTGATTGCA
TTAATCCTTATCATATACTTGACTGCTAAATGAGCCAGATTTGATGAAAA
GATTCGCGGTGGATATGCCAAACCATACCGCCAACTTGTTATGCATCAAG
ACTTGAAATAATATAGTTCAACTATCAACTGCTTTGCTGTGATTTTCTAG
ATGGGCATCCCTGTCAACGTGGCTTGGACTCTGGAAAAATGTTTCTAGGA
GCTAGGTTAGTTATATTACCGATTAAATAGCTGAAGAAGTGTGGAAGAAA
ACCAAAAGTAATATTCAAAGAATTCGACAATCACCACGATACTGTTGTCA
ATACATGATATTCATGACGTAATCTTTTATACGGAAGCAACCGAGATAAC
CCGGAACTAGTGGCAAAATAACAAAAGACTAGTGGCAAATTTTGCCACTA
GTTCCGGATTATTTTGTGTGCTTCCGTATGAAAGATTACATCATGAATAT
CATGAATACAGGGTGTCCCTAATTAAAGTATCGAGTTTGAACATGCGATT
GAGTAGAAAAGTTTGTGTGTGTTATCGCTAAAATATAAGAACGTTCTCCA
TCACACAGGCTTATTACAAAAAGTAGTTACAACGTATAAATTAATCGTAA
GGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAATTTTGTGAACACGCA
CATAAAACTTTCTACTCATAGTTGTCTTTCGACTCGATACTTTAATTAGG
GACACCCTGTACATCTTCACGTATATTTTTTTATGAATTGATTTATGAAA
CAGTGAAAGCGTCAACAAAAGTATTAATTGTAACCACAAAGCGGAAAGAA
GGTCATTTTGTGGCATAATTATCTCTTCATTACATCTCATTATGGATATC
TCTTCATTTTGCAATAGATTTCATACAAACTGATTAACACAAGTGATTGA
GAGTCGATGTTGAGGTGGTGGTTAACTTGTTGCGCACTGACAAAATATAA
TATGGACAAATTTAAGTGCTGATGTAATTACAGCGATAATATCTGAATCT
CAAACTCTAAGCATTTTACCTCATTGGTATACTGATATAAGTTATGAAAC
ATATACTACACAATGAAAAAAAACTTTTACAAGTTTGAAATGAATTTCGA
GTTTACTACTATATTTATCATCGACATTTTATATCATAATTTGTTACTGC
GTTCTTATTTTTATTTAGATAAAATATATAAATATTTATCATGGTTGGAT
TCAATGATCACTAAGTATCTTGTATTTATGTACCCAGGGAGAGAGCGAGT
AAGTGGAGCGAACGAATGAGCTAATAGCCCTAATATGGATTAATGGAGAA
CGAATGAATGATAGAATAAAGAACGAGAGTTGAGAAGTATCTTAAAATTT
TGAAAATCTGAGACTTGTGATTCTTATAAAAAGAATTATTCGAATAAGAA
AACTGTTCAGGAGAGATTCTTTGATCTTAGGAGGTCATGACTGTGAAGAA
ATTTCATTAAAATATTTATTCAATATAAAGTTATGATACAAAGTTAATAA
GTGATTGACCCCAAAAAACAGCAAAAAACTGCAGAANCTTTTCTTCTTTG
GTTAGATGACGGATGACTTAAGTAGCAAGGCATGCTTACTCATGGCCACA
CCTGATGCCAGACTTTGGTCTCCATCTATCCGCACTCCATTAACTTCTCA
ACTTTCTTTATATTTACTTACCGCTTTCTCTACGCTAAATTTATATTTTT
GTTGGTTGTCAATTTGTCTATTTGTCGTTTTGGTTTAGTTTTATAAAAAA
ATTTTCATTCTTCTTGAGTTTGTTTTGTTGCTGTGCTGATTTGTCGGTTT
TTGTCTTTGTCACGTTNTCAGTGACAACGTTCGATGATCAAGGACACTTC
AGTGAAAATGATAGTTATAGCACTTTTCTACAAGATCTTCATTTTTTTCT
TCTTCATTTTCATCTTCATTTTTAGAATTTTTTTAAAGATTTTTTTNTTT
GACTTTTAGCTTAACATGCGTTGTTTCTGAATTTTAATTAGCTTTTTCAG
ATATAATAAGAATCACAACGCTCAAATACGGATATAATTTTGGTGATTTT
TGGTGATTTGCTGAGCTTGAAAAAAAAATTCTTTTTCCAGTTCGAATTTT
TCTGGATTTCGTTTTTTACAGTTTAAAATCAGGCTTAACCGTTTTCGAGC
GTTCCAAGACAATGCTTAATTAATTTCAAAAAATCTCCTTGCTTTTTTAA
ATTAAGAATCATTAAAAATATGTATTCGATTTATGTAATTCTTATACAAA
TGTAATTCTATGAAAATGTGTATAAGACCATTTTAGGCCAATTTTTCCGG
GCGGGAGGAGATTCCATGAGATTTTTCATGGCCCCCGTCACCGGGAGGGG
GGCCAGGGGGCCATGCCCCCCCCCCCAATATTTTGCAAAGTAATATTTTT
TACTTTAAAAAATCTTATATATACCGTTTAGAGGGATGAAATAAGGGTGA
AAAGTCGAAAATTTTCTTTGTCACCCAACCATGGTAGGCGACATATTTTT
TTGGCCCCCTCAATTCGATTAGCACCATGTTTTTGATACGATGTTGTTTT
TTATATTATTAGGGGCCTTTAGCATCTAGGACGGCAGATTTGAAAAAGTA
CGACATGATTGAACAAAAAAAAGCCCTTACCATCCTTACTAGGGATTCAT
ATCTGGATCACAACTAGATTCTATTCTTTTCATATCAATTTTCTCATGAG
AATAGTGAATTCTAATAGGGTAATTTTAATGGACGTTTTTCAAATCTCAA
GATGACTGCATTTAAAATTTTTCCATGTGATATTAAATCTAGATAAAATC
GGATAAAATTTGCCATTTGATTTTAAGATTTACTTTACATTCTCATTCAA
GTCGCCGTCCTAGATGCCAAAGTTCCATATTATCTTTTCCTTCAATCCAG
GAATAACATATTTATGATTTATAAGATAATATTTTTCTTCTTTCTCGTTA
CATCTTCATCTTCTCTCTTAATCATCTTCTTTTTTCAATAATGTGCTGCC
ATTATCTCCTTTTATTGCTATGGTTACCAAAAATATTGTTTCAATTTTTT
TGTGTTTTCTAAATTTTCTTTTGTGTCTTAAAGTTTCTTTATTATTTTGT
GCTTTATCGGTTTTTCACAATCTCTCTTTGCGATATACTCTCCCTAGCTA
TGTTTCTTTTAGTTAAAAGATAATATACACAGACACAGAACAGTTATCAA
TTCTTATGATTCGAAGTTAGACTCAGCTGTACCCTGTAGTTTCCTTTCAT
CAGATAAATAATGTAAAAAGGGAAGTCTATTTGTATTATACGCTTCTGAT
GTGTACAGTTTTGATATAAACTCCTTCTTTTCTTCGTACTAACTAACCAG
TAGCACAAATAGTTTTTCAGGGGCGGACCAAAAACTTGTAAACTGAAAAA
GGAACCCTAAGGTTTTTAAGTTGTTATAATTATGTTGTTTTTTCTTCTTC
TATCAAAGCAAAATTTTTCTTTCAATCTCATAGATTCATTCAAAGAGAGG
TTTTGAGGAAGATTTTAAGGCGAAATGGTGGATATGTGTAAAACCAAAGT
CCACGATTTTGAGAAAAAATATGTGCACGATGTTTACGATCGGTTATCCG
TAGAAGAATCAAGTATCGACAAAAACAAGTGTAATTTACAGACCAGACGT
GGTAAATGCTGGAGAAGAGTAATTCGTTTTTTGCAATCATTCCCGATGGA
TTCACTTATCGGTGATATTGGTAAGAACAATCAATTTTTCAATGGATTTC
TTAGAAGAGTAACACGATATAAGGAGATCGCTAAAACACGGTTCTGTTTC
GGTGTCTCTTTTTTCACCATACATGCTTAGACTTTGGTAATATCATAACC
TGTGTCACAGACCCGGTTTAGGACCCCCTACCCACTGGAAGATTTTGCTA
AAATTCGTTCCCGGTGGGAAAAAATACTCTAGAATTTCAGCCCCACTGGG
AAATTGACTTCGATTCCATCCCCATTCGAAATTCTACTCCAAAACCATCC
CACTGGAGTTTTCAACCTTAGAACAATAAAGTTTTTATCCCAATTGGGAT
TTCAATAGAAATTTTTATCCACGCTGTGGGAAAAGTTTCGCATACGTGAG
ACAGGGGTGTGAGAATGCTAAATAAATTACAGTCCTGTTTCGGTGACTCT
TTTTACCATACATACTTAGACTTTAGAAATGTCATAAGAGATCGTCACGT
GAGATTATCCATTCGGCGCACACGGCGAATGTAACGATCTGAGCTGGTTT
TTCAGCCAAAACAATCAAAACTGCGTAGTTTTATATTTGAAATGAGAGCA
AAATCAACTGCTTGTAATGTTTGTGAACGTAATTGACGTTTGATTTTGTT
CCGAAATTCCGTAAAAAAATACTTGCAATTCCGATACCAATTTTTTTGGG
TATTTTTCCTCATTTTGACTAATTTTTTTTAGATTTTTCATGTGTGAATT
CCGAAAAAAGGGGATAAAAACTTTATAATACCGAAATTTCGAAGCAAAAA
TTCATGGATTTCCGATTCCGAAACAATTTCAGAATTTCGAAATACCGAAG
TAATTTTGCCTGATTTCCGAAATTTCGAAGAAAAAAGGGTCGATTTCCGC
AATTCCGAAAAACCGTACGCCCCCCACTTTAGAGTGCATATGTGCCATAG
GTGGATATCAAGATCTTGGCTACTTTTCTGGTATTGAGAAAATTTGAATG
GTTTGCACCAAGACGTCGCACTTTGAGTTGGAAAACGTGGCGTATTGGGC
TAAAGTCTGAGTGAGTCTTTTTAGCCAGGTTAGGTAATGTGTAAGAGCTA
AATATCTATTTCAATTTGGTTGAAGTAAATTTCCTTACTAGGGGTTTCGA
AATCTATTTTGATAGCGATTTAGTCCAAATTTTATTTTCTTCCAAATGAG
GATGAGAGTTCTGTGTGCTATTGAAAATATTGCAGAGCTGACTTTTGACA
CGTTGTTTCAGTGGGAAAGAATTCGACTGGTCTACGAAGAAATGCTACCT
TCAGAATTAACTTACCAAAAATATACTTTTTTGTGTAATAAGGCATTTTA
TCATTTAGCATTTTAACATTTAGATATGTGTATGGTTGGTTCTTTTAAAA
TGCTTGATTATAAAAATAGAACTAAGCTATCAGTGGTCTACACTGTGTAA
ACTCAATGTCGCAAAATATTTTCGCAGTTCATTGACACAGTAGACCCACT
GTTCCAATAAAAACTCAAGTGAAGCAAATAAAAGCTATTTCATGGTAAAC
GTTTTGATTTTCTTCTCTAATTCTTTTCGCAGTGTAGGACTACACTCTTT
TTCTTTTCTAAGAACAATGAGGCTTAAAATCGCCAAAAAATAAGCTCCAT
TTGAAAGAAAAATGTTGACCCTGAAGTAGCGCAATTTCAAGTCATTCAAG
GATTAAAGTAGTAGAAATTGGGTAAAAAGCCTAAAATTCCTCAATTTCAC
CCTATGAATAAAAATAGGATACAAAAAATAAGAACGGTCGAGCCTCAGCA
AAATTTTACTGGTTCTTATAAACAGAAAAGAGTGATTTTTTTGGTATCTT
CAAAATCACGGTTTATAGCAATACAAATTAAGCAGTTTAAAAAAGTTTAA
CCTTTCGATAATGTTTGGTCAAGTTTTGAAGAATCTTCTCGATCTTTGTG
AGGCTACAGAACTGTTTACTAGGTCACGTTTCTCTCCTGATTCAATCTCC
CCAAGATAAAGAAAAAGCACTGTAAAAGGTGATAAAATCTTATCTGCTAA
CTTGCAATAAAATTTCCTCCCTAAAACCTCGTTTTCATTTTATACTTCTT
CCACTTTATTCAGTTTAAAAACTTAAAAGATAGCTTGTTTCGAAATCGCT
GCAAATGTTTATTATCAATTTCGTTCTGCTTCTCTATATCTATTGCATTC
GTCAGAATTTATTGGATTCTTAAGCTTATTATAAGGTGTTTTTATTGCAT
TTTCAGAAGCAGCCAACGAGCCCATTTCCCCAAAATATCTGTTTCCTTTT
TCCAGGAGAGATCTTTTTTTGAAAAATGGGGAAACAGATCCAATTTTCTA
GGAAAGACCTTTTCCGTAAAATCTGTTTCCCCGCTCAAGCTGATGACGCC
ATCAGGGAGAAGCAGATCAATATTTCTAGGAGATGACATAATAAACTGGG
AAACAGATATCTATTTCCAAAAAGATGAAATTGCATTTGAAATAAATTGA
ACTTTCTGGGGGAAAACAGATATCAATCACAAAAAGCAAGGGAAACAGAT
GAAAATTTCCTGGGGAGGGAAACAGATATCCTATTCCTTATAAGCTTGGG
AGAACAGATCAAAATTTCAATTCTGAAAATTGTGGAAACGGACAACAGGG
AAAATACTTTGAGATTAAAAATTTAGGTTTTAAGGAGAAACAGATAAAAT
TTTTGAAACTTTTCGCCAACAGATCAAATTTTCCAGGAAGGCTATGTCTG
GGAAACAGATGTTTAAAAGAAGGTCCTCACTGGATGCTTTCGCATTTTGC
AGTATCTTAGTATTTTCAATTTGACCTTGATTGAGAATTGATTAAACCCT
AAGATTCATCAAAAATCAAATTTCATCACCAAAACCGAGGTTGGTATCCT
TGGTATTTCGATCCACTTTAGTCCAATTTGTCGATTTGCCAATTAAATGA
GCTCCTCTTGGGGTTGGCAGGGTAAAATCATCACTAGCAAAAAATACAAA
TTTGCTATCTCTATATAAGTTGATAAATTATAATTTGTTTGATACCCGAG
CAAATTCTAGTTACTACGCGCTGACAGGTATGCACTCTATCGGCCTTGAC
TCCACCGTAAGAGAATCTGACCAGGCTGAGGTTCGCACACCGCTTCGATC
TTTTTCATCAAGATTTGGGATAAATTGATTGAGCTATTAAGTGTGCTGAT
TGGCTAAAGCAAAACAATCGCACCAACATCAAGCACCAATCATAAGACAT
TTATGAACATTTTAAACATCGACCGTCGTAGGGGTCTCTTGTAGCCACTT
TGGGCTTTAATTGATTTTAAATGTGTATTCAAATTCAAATTCAAATTCTA
CTAGGATTTGGAGATGGAAGATTTCTTGACGAATCACAAACCAGCATTTT
CGGAATCGAAAGGTGTATCCATTTATGTGAAGAAGCGAAAAAATCTAACG
ACAATATTGAAACAATAGGCAGTGACGTCACACAGTTACCATTTCGTTCG
AATCTTTTTGACGGTTTGATATGCGTCGCTGTTTTGCACCACCTTGCTAC
TAAGAGACGAAGAATAGACGCGTTCAAAGAATTGGGCCGTGTGATGAGGG
TCGGTGGACAGCTTTTGTTTACTGTATGTGCTATGGGTGACTACCAAGAT
CAGGTATTTTTTAACAAACGAAGTTGTTTGATTGCTTGATATTATTTTTC
GTTTGCGTGAGAAAATTGATGATAAGTCCTCTGCTTTTACTCTCAATTTC
TAAAATAATCTAAAAGTAATCTAGATAAAGAGGTCTGTCCTGAAAAACCC
CTGGGTCACACTAGAAATTTTGGCCAAATTTTGTTGCCGGTGGGTAAAAA
AATACCCTTTAGAAGTTAAGTGTCCACATAATTTAGCAAGGTCATCCAGT
GTTATACTTTCTTATATTTTAGTACGGTGGATGTGACGTTTTGATTCCTA
CTTCTCGAGTTCACCAAGAAGAAGACTGCACCAAAGAAATACAAAGTAAG
TGAAGTCTAACCCGCTTTATTTTTCTTCAATTCACATCTTCTCCTATAAA
CTATTACAAAGATTCTTTAACATACTTCTTCCTGGGTTTATATCAGGTCT
TGAGAGTCGTTATGAAATGCACACCACTGTGTTACAGACCCGCTGGAACC
CCAGCCACACTAGAGAATTTGGTAAAAATTGCGTCCCTGGTGGGAAAATA
CCCTGAAATTTCGCCCTACTTGGGAAATAGGGATTTCTCTTCCAATTCGT
ATAATCTAAATTCTCTTTTTCACAGCTAACAAAAACAATACATCTCCGAA
CACAGATGCTATTCTCAAGAAAAACACACCAATAGGATCGCTAATCAGTG
AAACGAAAGAAAAACTTTGTTCCAACCTCTTCCCAGAAATACAATCATGG
TTGAAACATAAAGGAAAAGATAAAATAACAAATAACTTGGGAATTAACCG
GAAAACTGACATTGAGGAAGAGCAGAAATATTACCATATTTTTACTCAGA
ACGAAATAACGGATATTCTAGAATCAGTTGGAAATCTTGAAGTCACAGAG
ACACAGCATTATAAAGGTAGCTGGGTTTATATAGTGACTAAAACATCCTA
ACTCACATTGTTCAGAGTTTTTAAAAGCTCGGTTCATTATACAGTGTGTC
CGGAAAACAGAAGTTATAAATAGGGATTTCACCCGGGGGGCTGACCTTGA
CGGCAGACGGGGATGTGCCGCGGGAGTTTGAAAAGTGGACCCTGTCAGAT
ATGAATGTTTGGTAAATTTGGGACCCTGTCGGAAGGAAAATCGAAACAAA
TTTCCCATTTTCATCCTAAAAATTTTGATTTCCACCCTGAAAATTGTCAA
AAATGACCTAAAAGACGACCCTGTCAGGTACAAATGTTAAAAATTAGTAA
ATTTGGGACCCTGTCAGATATCTTCAGAGCCTAAAAAAAGAAACCCTGAC
CAGTGACACGTCCCCGTTCCCAATATCGCCCGAGTGCCTCGACCAGGGAT
TTTCAATACCTAATCATCCAAATTGTTTTTCAAAAAATAATTTCATTACG
TTTGAGAATAGAAAATATATTTATTTTTAAACATAAGGAATTCCATTTTA
TTTCAATTGTTCTAAGCTCTGGCGATATTACGAGATTTTTAAACCACCCA
AAATCTATTTCCGTTTATTTTCTCGACACACTAAAATTCTCCGAACCATG
TCCATTGTAGATTTGATTTAAATCCGTATTTGCAATTTTGGAGATAGTAA
TCTTCATCCATAACGTTGAAACTACATTATCAGATCAGATTGGTTCTCCT
TCAGGTCTTTCTTCTTTAAAATTTTGATTTAGTCATGGACCATTAGAAGG
TATTGCTAATTATGCTCACTACTAAATTGTATTATAATTTTTTAACAAAA
CAATTTGTAAATCAATTTTAATTTTCTAACCAATTTATTGTAACAATGAT
TTTTTTTAATTGTATTTTTGTACATTAATCGGTAATCACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030094XLOC_030094Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047243-exon-scaffold_123-1575043694:474661..474806TCONS_00047243-exon-scaffold_123-1575043694:474661..474806Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:474265..474330TCONS_00047243-exon-scaffold_123-1575043694:474265..474330Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:473785..473848TCONS_00047243-exon-scaffold_123-1575043694:473785..473848Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:472722..472818TCONS_00047243-exon-scaffold_123-1575043694:472722..472818Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:472292..472369TCONS_00047243-exon-scaffold_123-1575043694:472292..472369Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:471912..471983TCONS_00047243-exon-scaffold_123-1575043694:471912..471983Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:471414..471524TCONS_00047243-exon-scaffold_123-1575043694:471414..471524Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:470247..470319TCONS_00047243-exon-scaffold_123-1575043694:470247..470319Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:469796..469849TCONS_00047243-exon-scaffold_123-1575043694:469796..469849Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:469502..469556TCONS_00047243-exon-scaffold_123-1575043694:469502..469556Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:465987..466223TCONS_00047243-exon-scaffold_123-1575043694:465987..466223Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:462354..462652TCONS_00047243-exon-scaffold_123-1575043694:462354..462652Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:462012..462084TCONS_00047243-exon-scaffold_123-1575043694:462012..462084Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1575043694:460515..461731TCONS_00047243-exon-scaffold_123-1575043694:460515..461731Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:474661..474806TCONS_00047243-exon-scaffold_123-1510915933:474661..474806Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:474265..474330TCONS_00047243-exon-scaffold_123-1510915933:474265..474330Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:473785..473848TCONS_00047243-exon-scaffold_123-1510915933:473785..473848Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:472722..472818TCONS_00047243-exon-scaffold_123-1510915933:472722..472818Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:472292..472369TCONS_00047243-exon-scaffold_123-1510915933:472292..472369Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:471912..471983TCONS_00047243-exon-scaffold_123-1510915933:471912..471983Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:471414..471524TCONS_00047243-exon-scaffold_123-1510915933:471414..471524Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:470247..470319TCONS_00047243-exon-scaffold_123-1510915933:470247..470319Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:469796..469849TCONS_00047243-exon-scaffold_123-1510915933:469796..469849Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:469502..469556TCONS_00047243-exon-scaffold_123-1510915933:469502..469556Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:465987..466223TCONS_00047243-exon-scaffold_123-1510915933:465987..466223Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:462354..462652TCONS_00047243-exon-scaffold_123-1510915933:462354..462652Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:462012..462084TCONS_00047243-exon-scaffold_123-1510915933:462012..462084Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1510915933:460515..461731TCONS_00047243-exon-scaffold_123-1510915933:460515..461731Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:474661..474806TCONS_00047243-exon-scaffold_123-1491911889:474661..474806Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:474265..474330TCONS_00047243-exon-scaffold_123-1491911889:474265..474330Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:473785..473848TCONS_00047243-exon-scaffold_123-1491911889:473785..473848Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:472722..472818TCONS_00047243-exon-scaffold_123-1491911889:472722..472818Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:472292..472369TCONS_00047243-exon-scaffold_123-1491911889:472292..472369Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:471912..471983TCONS_00047243-exon-scaffold_123-1491911889:471912..471983Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:471414..471524TCONS_00047243-exon-scaffold_123-1491911889:471414..471524Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:470247..470319TCONS_00047243-exon-scaffold_123-1491911889:470247..470319Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:469796..469849TCONS_00047243-exon-scaffold_123-1491911889:469796..469849Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:469502..469556TCONS_00047243-exon-scaffold_123-1491911889:469502..469556Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:465987..466223TCONS_00047243-exon-scaffold_123-1491911889:465987..466223Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:462354..462652TCONS_00047243-exon-scaffold_123-1491911889:462354..462652Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:462012..462084TCONS_00047243-exon-scaffold_123-1491911889:462012..462084Clytia hemisphaericaexon
TCONS_00047243-exon-scaffold_123-1491911889:460515..461731TCONS_00047243-exon-scaffold_123-1491911889:460515..461731Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:460515..474806 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24897	0.0868148	0.797	0.956742	2.54162	2.28184	19.4691	19.2773	5.3934	4.95657	5.51854	4.49462	4.33807	3.19258	5.30924	6.28172	5.16291	5.07991	3.1419	3.37418	4.18009	4.3371	3.51012	4.78547	7.91021	11.8457	2.24491	2.44101	2.45845	2.87098
Blast
[Close]
BLAST of TCONS_00047243 vs. Swiss-Prot (Human)
Match: STX7 (Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4)

HSP 1 Score: 132.109 bits (331), Expect = 1.370e-33
Identity = 90/212 (42.45%), Postives = 129/212 (60.85%), Query Frame = 2 
Query:  161 SNLVDDVGRNIQQIIRKTGLIQKLINQRTTLENETFERLQSEQKN--ANKLIKDTSLQFQILDNLQTTDLENARQKNIQQEKLKQNFSDVLKNFQKVQKLVSEKEKTEVQRARA-------LPVDGNHHKDDNSRMYDNQPQLQRQTEAELSLDEIR---EREAAIRQLESDIVDVNEIFKDLTIMVHEQGETLDSIEANVETALTHVQDGN 760
            + L   +  NIQ+I + +  IQ+ +NQ  T ++    R Q +QK    N+L K+T    +   +L TT  E  RQ+ IQ+++L   F+  L NFQKVQ+  +E+EK  V R RA        P D +  ++  S     QPQ+Q Q E E++ D++R   ERE++IRQLE+DI+D+NEIFKDL +M+HEQG+ +DSIEANVE A  HVQ  N
Sbjct:   12 AQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQ-RQRKIQKDRLVAEFTTSLTNFQKVQRQAAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWESQTQPQVQVQDE-EITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQAN 221
The following BLAST results are available for this feature:
BLAST of TCONS_00047243 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STX71.370e-3342.45Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4[more]
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