TCONS_00047208 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047208
Unique NameTCONS_00047208
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4027

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047208 ID=TCONS_00047208|Name=TCONS_00047208|organism=Clytia hemisphaerica|type=transcript|length=4027bp
ttcagttgcaAGATTACAATatgaaagtattaatataaaagaaatataaa
tcaatatGGCGTCGGTGGGAAATGGAAGTGGGATGTTCAATAAAACACGT
CCAAAGATCCCTGAAATTGGCGTGGATTTGAACAAGCCAGAACAAACATT
CAAATTTGTTATGGCACTATGTGCAATCATATTTATCTTGGCTGTAGCAT
TCTTCACTTATGTCCGGACAAAATTTCGCCAAATCTATGCACCAAGATTA
TTGCTTATTGAGAATAAGATGTTTGGTATTGGAAATCTACCAAAGAAATC
ATGGTTTTCTTGGGTGACTTTGTCATTCAAAACCAAAGATGAAGATATTT
ATGTCTTTGCTGGATTTGATGCTTTAGTATTTATTCGATTCTTACGTCTC
ATGCTTAAATTTGCGCTATGCACTATGCCATATGGTTTAATTGTATTGCT
ACCGTTGAATGTTGTTGGAGGTAATAAACTAGATGATGGGCTCAATAAAT
TGAGCATGTCAAATATTGTGCATGAATCAAAACATTTATGGGCTCACTGG
GTCGCAGTCTGGTTTTATTCATTACTTGTGTGTTATTTTTGTTGGAGCGA
ATGGAAAGTGTATATTCAATATCGTCAACGGTATCTGAAGAAGGGTCTTC
ATCACCAGTTTGCTCTTCTTGTACAGGAAATTCCTGATGAGCTGAACGAA
GATCATTCACTTTATGAGTTTATGGACAAATTGTTCCCGAATAAGATTTC
AAGTGTGCATGTCGTAAGGGATTTGGATAATTGGAGAAGCTTAGTGAAAA
AGCACGATAAATTTCTTTTGAACTGGGAGAATGCTAAGTTTTACGAAGAG
AGTGGAAAAGCAAGAAGACGGATTCGTAAAAGTTGCTGTGGCGataaagt
tgatgcaatcacTTATTATGAGAAAGAACTCGAGCTTATTCAAGAAGATC
TGTTcactgaaaaatcaaaagacgGAAAGGAGGTTCTGAATTGCGCTTTT
ATTGTCTTCAAATCCATCAAAACTAAAGAACTTGCACTGAAAAGTGTTTG
GCGCAAAGAGTCAATGACTTTTTCAAAATACCCTGCACCACAGTCCTCAG
AAATAAAATGGAGAGCTTTGAAGTATCCTTATACTGTCAGAAAAATGTTG
GAGCTGGTAGGCTTTATTACAGTGTTTGCTTTGGTGCTATTTTGGGCTGT
CCCTATCACTTTCATATCAACCTTGACCAAATTGGAGTCTTTATCTAAAG
AATTCAAATGGCTTGACTCAAtACTGGCGGGATCATCCAAGATGTTCATC
AGTTTTTTACAAGGCGTATTACCAGTCATTCTCATCGCCGTCTTTTATCT
TATTCTTCCTTATATTTTGTTCTTCATCGCAACTATTCAAGGATTATTCT
CAAACAGCCGTTGTGCTGAAATGGTGTTCAAATGTTTATTTGTATTCCAG
ACGTTCAATACTTTCTTCATCTACATCTTATCCGGATCTGTTCTCCAAAA
CCTCTCGCAAATCGTTCAAGAACCTTTCAAAATACCTAGCTTGCTAGCTA
AATCGCTGCCCAGTCAATCAGGATTTTACGTCAACTACTTGGCTATAACC
TCGTTTGTTGGGTTAGCCATAGAACTCACACGTATATGGCCGTTGATTCG
CATTTCGGTCACCTTGAAATGGTTTGCAAAAACGTCACGCCAAAAGCTGG
AAGCCTGGAAACCGAAGCGTGCTGAATATGAAGTCATGGTATGCTGTACA
TCAATATTCACAAGCATTGTTGTTCTTCTTAATCGGGCTCTCCTTCTCGG
TGCTCTCACCCATCATCGTGCCCTTCGTCGTCTTGTATTTCGCCTTCGCA
TACGTCGTATGGATGTATCAACTGTTACACGTCTATATTCCTGACTATGA
TCACGGTGGCCGGTTCTGGACTTTCGTTTTTAATAGaatgatggtatgcg
TTTTGGTCTTTCAATTATTAATGGTGGGCGTGTTCTTGCTCAAGGAGGTT
TGGTTTGCCGCTGTCTTTTTAGCGCCGCTCATCATTGTTACGGTGGCATT
CTGGCTTTACATTAACGAAACATATCTCCCGTACAGTCGCTACTTGACCG
TCGAAGAAACAATCGGCTTGAAAGGGGCAGAACAACGATTTCTAGAGGAG
GTGAAGAATCGATACATCCTCGATCAAACCGTTCCCGAAGTATTCGAGTT
GAGTACAGACAAACAACCATCGAGTGAAGATTATATTCCAATCGATTCAA
TCAATAATCCGGATACTGACGAAGAAAATCCACAAGACATGAAAGAGAGC
ACGCGACTGCTTGGTATCTGACGATTAGGTCTGGATTTATTGGTTAATCA
TTTTTGGAAGATGTTTGAAATTGAATGGCTAGTCAAGTTAGTACTGGACT
TAAAAGATAACCGTACAGATTTCCGGGTAATTAATCTGATGTTCGTTACT
GGTGAATTTTCTGCGAGTTTAGTATGTAACTTTCGCGTCGAAATTTCTGG
ATGTTAATTaatgttgttttgttacttCTCAACCCTGTTTAATGAGATTT
AATGTCTAATTTGACATTACCCATTTTCAACTGGCAAATTCGTGGAGAAT
TTGAAGGCGATGAACTTAAGTCCTAGTGTAGTCTCTTCACGTCctacaaa
attatttttgttagtattttccAAAGGCGTTCACCTTTGAATTCGTGTAG
CTCTATTGTGATCTTGTGGGGTAGCACGATTTTTCATATTATTCATATGT
TTTTTAAcggttttattttctttttttcaatattgtaCATAGTAATGAAG
AACATTATATATTGTaatttttcctgaattttctaGATGTATTATATTAT
GAAGCTTTCTAACAGCAAATTGAGAATAGGTTTGTCACAACAGAAGTTGT
CACTCAAAAAGATTGGAgctgaaaatgagtaaaattttcaaagattaatG
ATTTTATACATACATGACGATGATGTCATTATTAATTCAAAgagttttca
taatttttaaattcgAATAGTCAATATcatgtgtcaaaatttgaacatAA
TTAGATAATTAGTTCAccaataaattttgagttttaaacgatTTCAGCCC
CGGGTTTATGTTATGTTTCACAATAAACCCATCTGGACAACCTATATGAC
ACttctaataaaattttattaaaagccAAGAANctctagtttttccgacc
cttacagtgcatttgaggtgccttgaaaaagacacccttagtgcccgcac
atacccgtcggtccttttgcccagctgccccccccgggattaAAAGCCAA
GAAGTTTCAAATCGTTTTGGGCGTGGTGGTAGGCTCTACACCCTAGGCTA
GGGCAAAAAGAGTTTTGAATTTGTTCCTTGTCTTTTTAACATGAGATATT
CTATAATGCAAACTATATTTTTAACATGATATTTATCTTTCGTTCTGTAT
CTAAATAGTTTTTTAGAGGGTAAACATTCATTGTGTAATTCTGCAAACAT
TCGTGATGATGTGGAAACTTCTGACGGTCTTCCATAAAACAAATTGGGAA
AAACTTCGGGGGTTTTACTGACTTATTATAGAGCAAAACTTTGATCCGTt
gggaatagaccttttcataaattacgtcacgagcaacgcttacctcgctt
tcaaaatattgctattgtGATTGAATCCCAGAGGAGCTCATAACAAGTCT
TCTCTTTTTGAAAAGTAGCACTTTAAGCCCCAAGGAAcataatcaccttg
gtaataatttcaaaacgaggcagtggTTGCACTCGAAATAATTTATGAAA
GGTCTATAAGTAGTccgaaaacgaggcaagtgttgtttatgacgtaattt
tgtATAATATGGAAAGACCTCTTCATCACAGgacaaaaaattataataaa
ccACGTTCTTAGAGTGTCAATTTTAAACCATATCGTGTTTTGTAGGGACA
TTGttgtatttttctatttttttcctaAATAAGAATTTCAGATATCATTT
TCATCGGTAATAATTTCAATACAGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_123:348478..362054+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047208 ID=TCONS_00047208|Name=TCONS_00047208|organism=Clytia hemisphaerica|type=transcript|length=13577bp|location=Sequence derived from alignment at scaffold_123:348478..362054+ (Clytia hemisphaerica)
ttcagttgcaAGATTACAATatgaaagtattaatataaaagaaatataaa tcaatatGGCGTCGGTGGGAAATGGAAGTGGGATGTTCAATAAAACACGT CCAAAGATCCCTGAAATTGGCGTGGATTTGAACAAGCCAGAACAAACATT CAAATTTGTTATGGCACTATGTGCAATCATATTTATCTTGGCTGTAGCAT TCTTCACTTATGTCCGGACAAAATTTCGCCAAATCTATGCACCAAGATTA TTGCTTATTGAGAATAAGATGTTTGGTATTGGAAATCTACCAAAGAAATC ATGGTTTTCTTGGGTGACTTTGTCATTCAAAACCAAAGATGAAGATATTT ATGTCTTTGCTGGATTTGATGCTTTAGTATTTATTCGATTCTTACGTCTC ATGCTTAAATTTGCGCTATGCACTATGCCATATGGTTTAATTGTATTGCT ACCGTTGAATGTTGTTGGAGGTAATAAACTAGATGATGGGCTCAATAAAT TGAGCATGTCAAATATTGTGCATGAATCAAAACATTTATGGGCTCACTGG GTCGCAGTCTGGTTTTATTCATTACTTGTGTGTTATTTTTGTTGGAGCGA ATGGAAAGTGTATATTCAATATCGTCAACGGTATCTGAAGAAGGGTCTTC ATCACCAGTTTGCTCTTCTTGTACAGGAAATTCCTGATGAGGTTTGTATG ATTCTCTATGACTCTATTctagaaataaatatttttattaaaatttgagg CCGGGCAGGGAATTATTTAAAGCTTCAGGGCTCTTCTAGAAACACCTTAA AATCAAATTGCTTGGATCTTTAtgtaaaggttttatttttacataagtgt ttccgtttcatatcagacacatatttcatatcaggacagtgttttgctat tgttatgttatgctgatataagcaagaaatgtttttcttttcttctttcg gACCATTCTTTCTCCACATTCGTGTcgatccaatgtgaaaaagcttgtga attaaaattgatgagttagcaaacgatatcactcttatttcaaaacaaaa cctttgattcaagattttaaaattcaagATATTTTGTGTTTAGCTGAACG AAGATCATTCACTTTATGAGTTTATGGACAAATTGTTCCCGAATAAGGTA ATAACAATTCTCACTTTATTTATTGTCCTGTTAAAAGTGAAACAGTAATG AGACAAGACCTCTAGCCTTTATTCCTTTtctgagagagagagagtggtCC ATCCTATCAGAGGAACTGGcctaaaaaaaatatgttaaatataaatttta agaaatcaCTACGCTAGGgacaaataagaaaaaaacaaaaaaacactatt atcaaagatgtaaaagctATAAGAAAATCTAGCATTTCAACATTAAACAT TTATCAACTTTTTCCATACACCACGATCAAAAACCAGATTATACCAAGAT GCTCTATTAATATCGAACCATTTAAGAGATTTATACACCCCTCTTCCATA TGTAAACTCAGGGGAGCCTTTCAAACGACGATTGTGCACCCAACNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAATTTTG TACTTTTGACCTTAAAAATCGCGCAGAATGCCTCGCAATAGGttagattt tcacaaaaaactaAAAGCACAACATCTTGAATGACCCAAAATGACTGTTG ACCTCCTATGCTAAGAGCACTCAAGAAATTCACAAAGAAactaatttgtt ttaaaaagctatactttagaGACTCTCATGAATGCAAGTTTGTGAAAAAT TTATGCCTCAGAGACAATAGATGCAAAAGTAGGCGAggatacaaaacaaa acaaattttggtttaCTAATTTTGGATCATTTTCCACTAAATTTCTGTCA CTAAATTGCACAGCAATAGATTCTTTGGCTAATGTTGGTTGTTATGTTTT CATATAGTGATGAAGATAACTGAGATAGGTTTATGGATATGATTGTCTAA ATGTTGGTTCTTTTCATATAGAAGAACATATAATTATAGTTTTGAGCTTT CGTAAAACCTCTTATTTAATTGAGGCCTTGCTAAATGTCAGTTCTAGAAT GTCAAATAATGCAACAGAAGAGAGAAAATTGTTCATACAAATATCTAAAA GATTAACAAAAGATGATGTTGATGCCATCAAGTTCCTGTATGCAGGAGCC ATTGGAGAAGGTGTACTGGAAGAAGCAAAAACTAGTTTGCAGTTAATCGC AATCTTGaaacaaaatggtaaaatagaaaacataaaacaattttgtgaaG AAGTTCTAGATGATATAGATAGGAAAGATATTTCAAATGACATTCTGGGA AGACCGACTCCTAATAATGAAGCAggtcaaaataaacaaacaaagaaagt tgagaaattacCCAATGAATTGTTAGAATATGTTGCAGATCAAATTGCTG GTGACTGGAAACGATTTGGTAGGAAATTAGCACTTGGTGAGAATGTTTTG GAACAGATTGAGATTGACAATAGGACAACTTACGAAAgatcttatcaaat tctgttgAGAtggaaaaaagactttaaaaatcaTGATTGGAAATCATTGG AGAAAGTCTTATCTGATCTCCCGAGATATGACATTGTCAGAGGAGTAAAA TCCAAATTCGGGCATATTGTATTTCCAAATAGCAACCCTGGTCCAACTAT GCATCAAGAGTCAGCTGGTGATGATTCTATCAATAAAGATGAGTTTGCTT TGATTGGTCCCGGCAATACCAATAGTTCTAGCAACAATATTGAGCAAGGA GTAGCAGAAATCAAACTTGCTAAGGCTGAACCTAAGGAAAATTGAatgga attttttctttttagaatttttctatttattatttttgtggCCTTACTTA GCCCTGCTATCCTTGGTTTATCAGTAACAGTAAATGAATCAAGATAATTC TATTTTGTTTTGGAATTCTGAAGGTGTATCAATAATTAAGCTATCTTcca tatgaaaaatataaatcatttcaaaaatatcttttgattatGGTAAATGT GTTCAAATTGATGTCATacatttttgtacttttaatGTTGTAAGGAATAT ATTTTTCCTCTCACAACATCACAATTTGTATTACAATGTAAATGATAGGT CTTATTTTGTAAGTTAATTTTTTGTATCTAGAATTTAGGCTTTGTATAAT TACAATATTTTCCAGTTCAGTTTCTCTCATTTAAAACATTTCTgataaaa ttgaatttgaaatgtttcatgacttttgttttcttataaatcaaaatatt atgagtCATGCAATAGTAATGATTTTTACACCTGCTTTTTCACTTAAATG TGTGAACAtaatattttgtacattttatgaaaatgtttgattATATTTGG TTTCAAAgatctttttttataaagatgtactgtttttttgaaatcttgaa caTTCAAAACATTTGGTAAATCACCAAGGCAAAAACTCTtcacatttatt tttttttcagttgcaAGATTACAATatgaaagtattaatataaaagaaat ataaatcaatatGGCGTCGGTGGGAAATGGAAGTGGGATGTTCAATAAAA CACGTCCAAAGATCCCTGAAATTGGCGTGGATTTGAACAAGCCAGAACAA ACATTCAAATTTGTTATGGCACTATGTGCAATCATATTTATCTTGGCTGT AGCATTCTTCACTTATGTCCGGACAAAATTTCGCCAAATCTATGCACCAA GATTATTGCTTATTGAGAATAAGATGTTTGGTATTGGAAATCTACCAAAG AAATCATGGTTTTCTTGGGTGACTTTGTCATTCAAAACCAAAGATGAAGA TATTTATGTCTTTGCTGGATTTGATGCTTTAGTATTTATTCGATTCTTAC GTCTCATGCTTAAATTTGCGCTATGCACTATGCCATATGGTTTAATTGTA TTGCTACCGTTGAATGTTGTTGGAGGTAATAAACTAGATGATGGGCTCAA TAAATTGAGCATGTCAAATATTGTGCATGAATCAAAACATTTATGGGCTC ACTGGGTCGCAGTCTGGTTTTATTCATTACTTGTGTGTTATTTTTGTTGG AGCGAATGGAAAGTGTATATTCAATATCGTCAACGGTATCTGAAGAAGGG TCTTCATCACCAGTTTGCTCTTCTTGTACAGGAAATTCCTGATGAGGTTT GTATGATTCTCTATGACTCTATTctagaaataaatatttttattaaaatt tgaggCCGGGCAGGGAATTATTTAAAGCTTCAGGGCTCTTCTAGAAACAC CTTAAAATCAAATTGCTTGGATCTTTAtgtaaaggttttatttttacata agtgtttccgtttcatatctgacacatatttcatatcaggacagtgtttt GCTATTGTTAggttatgctgatataagcaagaaatgtttttcttttcttc tttcggACCAATCTTTCTCCACATTCGTGTcgatccaatgtgaaaaagct tgtgaattaaaattgatgagttagcaaacgatatcactcttatttcaaaa caaaacctttgattcaagattttaaaattcaagATATTTTGTGTTTAGCT GAACGAAGATCATTCACTTTATGAGTTTATGGACAAATTGTTCCCGAATA AGGTAATAACAATTCTCACTTTATTCATTGTCCTGTTAAAAGTGAAACAG TAATGAGACAAGACCTCTAGCCTTTATTCCTTTTCTAACTGCGATTTAAT AcaattaaatttgatattttgctaATATTTTAAATAGTAAGATTTTGAAC AACATCCTTATATAAATAACAGGTTAAACTAATTTTCAATCTGTCTTTTA GATTTCAAGTGTGCATGTCGTAAGGGATTTGGATAATTGGAGAAGCTTAG TGAAAAAGCACGATAAATTTCTTTTGAACTGGGAGAATGCTAAGGTATGT TCTCACACATTATATTATGCCATAAAATATACTATACTTTTAGATAGGGA AATCTGTACTGTCATAAAGACCACGCTATGAGATATAGAAATTTTGCTAA ATTCACAAACCATACAAAATCTATGTTAGATTTTTCATTGTACAAACATT CAGATTTATATTGCAATTTGTTTTCATTATAGTTTTACGAAGAGAGTGGA AAAGCAAGAAGACGGATTCGTAAAAGTTGCTGTGGCGataaagttgatgc aatcacTTATTATGAGAAAGAACTCGAGGTATTTTGATAACAACTCAATA TTTTTACTACTCAACTTTCTTCTGATTACAGCTCACAGAGAATAcccttt ttgataaaaatccatacaaattttctttcatattcaTGTCTGCCTTGGTT CACAAGACTCTGTTTTTCCCTGAAACTTTGCTTTGCCAAGGATGAGCTTA TTGGATATTTTATACAGTTTCTTACTGTTTCCCTGTTCAATTTAACTTCA TTAAACACTGTAAAatatttgtttgaatttttatttaataaagCTTATTC AAGAAGATCTGTTcactgaaaaatcaaaagacgGAAAGGAGGTTCTGAAT TGCGCTTTTATTGTCTTCAAATCCATCAAAACTAAAGAACTTGCACTGAA AAGTGTTTGGCGCAAAGAGTCAATGACTTTTTCAAAATACCCTGCACCAC AGTCCTCAGAAATAAAATGGAGAGCTTTGAAGTATCCTTATACTGTCAGG TACGTGTTTTGAGTAGTAGAGCTCTCATTTATAGTGGGGTGATAGCCAAA TTTTTACTCCATAAATAACAGTCTCAAGCCAAAAAGTCGTCTGTCCATAA GCTTTCAACGAAAAATCCTAAAATGTCTAGAGACCATTTTCGAAGAACCT TTTTCATGGCATTTGGTTTTAACAACAACATGAAAATGTATTTTCATTGA AAGTGCTTCATCTGTCGTACAGTAATGGTTACTGGCTTGTTTTGAAAGGC TTTAAACGGAGGCTTTTAATACCAATATTGACTGTTAAACGTAATTTTTC CATATCACATTCATTACAGAAAAATGTTGGAGCTGGTAGGCTTTATTACA GTGTTTGCTTTGGTGCTATTTTGGGCTGTCCCTATCACTTTCATATCAAC CTTGACCAAATTGGAGTCTTTATCTAAAGAATTCAAATGGCTTGACTCAA GTAAGTGTCATACTTGTTCCGTTCAATAGAAAATCAATGATCTGTAATGG TTGATATTCTGTTTATCAAAACTATACCACACTGTCCCAAAAATAGCAAT ACAAACAATTCTGAAGAATACTTGTATTTACCATTTAAATAATCCTTGCT ATCCATTCAGCCTATCATATGTATAAAAATGTACTAAagtaatttcattg ttttcttgttttttagtACTGGCGGGATCATCCAAGATGTTCATCAGTTT TTTACAAGGCGTATTACCAGTCATTCTCATCGCCGTCTTTTATCTTATTC TTCCTTATGTATGTATCAgaaaacaaacctttttgaTTTACGATTGAATG TATTACGGTCAGGCACATCCCCGCTGCCATAATATACTTGTAGGTTACTA TATGCCGGACTATATACAAAGTTTACCTAACGTTGCTTGGTGAAGTGGCA TACCAACAACTGAAAATTAGAATATGCCTTGATCTCGGGACTGATGTTTA GTATGGGTCTGGTTTCTGAAAATCATCTTGTCTTATCATCTCATCTTGTT TTTTAGTAATTTACTAGTCTCAATTTCAAGactttcttttttcataaaaa gaaaaCAGTATTAATTGAAAAGGAGAAGGACTTTTCAAGCTTGGAATTAT AATCTAAGGTCCCGATTAGTAGGAGGAAGGGGGTCCCAGGGGGTCCGAAT AAAAGGGgaggttggaaattgtaccGGAAATATTTCGAAAGTTAATAAAT GAGACGTTTATTCAGTACCTTAAGAGTTGTTAATTCGTGGTCTAGCTCTA AAATAATAGTGTCCTATTaaagcttttttcttttcacaatTTCTAGATTT TGTTCTTCATCGCAACTATTCAAGGATTATTCTCAAACAGCCGTTGTGCT GAAATGGTGTTCAAATGTTTATTTGTATTCCAGGTATAGAGATATTATAT TTAATCACatgctttttttaaacaaattggATTTTACTTTGAGATTTCGT GAGCATACCTTAAGTGGATCATATACGCGAGGGTTATATTAAAATTATAG ATTATATAAAACCGTAGGTTATTTACCAAAacctctaggaaaatgaaaga aattagttaaaaaataaaatcacgcGAGAATTGAGTTATTTTTCAATCGC AAAAACATctactcgcgaaagtttatccacTAAAGATATTTGTAAAATTG AACAGTAGTATTGTCTCTTGCTTCGTCACTGTGTATGCTCTGTTTACCTC GAGCCGGTGACGAACCTTTAGTATTTGTACGATCTGTTTGTGGCCCCTAA GATGAGACCAaataaatttattgttctacgggcccgaccgaccctggtTC ACCCAAATTTGAAAAgctaataatattgaatttgcaaAGCTGGAGGATGG GCTTTTGATTTTTCGCAAATATGTTTAAATGAACTTAAAATAGCCCAATG GAAATGACACGAAAATCGCACGTTAAAAGTTTTCTGcttcaaaatgtcac aaattttttagacttttaccttccgaccctagattttaggaaatttattt ttataataccGACCtaccaatatttttctgaagctCTTTCCatggaacaa aaaaaaattgtttcgcCTAATAGATAAAAAATAACTTCTTATAATATCTC TTGtaaaatctattttaactttttaatgaATCTAATTTTCCGTTTTTAGA CGTTCAATACTTTCTTCATCTACATCTTATCCGGATCTGTTCTCCAAAAC CTCTCGCAAATCGTTCAAGAACCTTTCAAAATACCTAGCTTGCTAGCTAA ATCGCTGCCCAGTCAATCAGGATTTTACGTCAACTACTTGGCTATAACCT CGTTTGTTGGGTTAGCCATAGAACTCACACGTATATGGCCGTTGATTCGC ATTTCGGTCACCTTGAAATGGTAAGAAAGGGTATTTTAAAACTTACTTAA GCTTACCGGAAAGGTCTAGCCAATACAGATATAACACGGTTGTATCATGA AGGTAGAGTATCCAGCAACAGTACgcagggttgtgggttcgatccccagc tgAGTCATACCAAATATTCCCTAAATGGTACTTGCAAACCTACTACTAAC CAATGCAGAGCAACTTTAATGGATTGAAATATTATGCTTATTGAAAACTC AGCCGTTTGAAACTACAATAAACTTTCTTATTCGAgcttctattattcaa atctttctataattcgaacttattctcaGTTTCCATCAGTGAGAAACCTC TCTTACAATACTCTCTATAATTAaaatctctctataattcgaacaaatag gATTCCCCGTTTCAGTTCGACTCGCGTTTATtggaacttctattattcga atctttctataattcgaacttattctcaGTTTCCGTCAGGGAGAAACCCC TCTTACAATACTTTCTACAATTAaaatctctctataattcgaacaaatag gATTCCCCGTTCGCGCGAGTCCACTGTACCTTAACGAAAATCCTATCAGT AAACCCTCTTTctacaatttcatttcatatccATAGTACTTGGTGCATAT CACAAGAGATGGGAAAGCATTGTGTTAAATAGTTAcacaattttatgatt tttcttgTTCTGTTTAAGGTTTGCAAAAACGTCACGCCAAAAGCTGGAAG CCTGGAAACCGAAGCGTGCTGAATATGAAGTCATGGTATGCTGTACATCA AGTAGATTaaattattttctcaaattttgtttcttttcgcgaaatttaat ccacgcgaaaattttacATTCTCAATTCGCGAGAAAAAGTCTGCGCGAAA ATTACTCCTAAGATAGAAATGTTAAATTCTTAACATGGTTCTGcaaatta tataaaatattgatgcAATTTTCTGACAACTAAAGTCCCTAAATCGTCAT TTGAAATgtattattttctcttttatttacATTAAGTATTCACAAGCATT GTTGTTCTTCTTAATCGGGCTCTCCTTCTCGGTGCTCTCACCCATCATCG TGCCCTTCGTCGTCTTGTATTTCGCCTTCGCATACGTCGTATGGATGTAT CAACTGTTACACGTCTATATTCCTGACTATGATCACGGTGGCCGGTTCTG GACTTTCGTTTTTAATAGGTGAGTATACAATCGCTTTCTTATTGGACTAT CCTTTTTCTTGTGATTATTATCGGGGTTTGGTTTCATTTATTGTTGATCT GACTGTATATGTATCTTAATTTTGTAGTAGTTTAATGAGATGAAAGAGTA TTAAGATTTTCCCCATCGAAATTTATCCTGAAGTATTTTTTTCACCAAAA GAGATTTTCCTTCTTTACTtcatagaatgatggtatgcgTTTTGGTCTTT CAATTATTAATGGTGGGCGTGTTCTTGCTCAAGGAGGTTTGGTTTGCCGC TGTCTTTTTAGCGCCGCTCATCATTGTTACGGTGGCATTCTGGCTTTACA TTAACGAAACATATCTCCCGTACAGTCGCTACTTGACCGTCGAAGAAACA ATCGGCTTGAAAGGGGCAGAACAACGATTTCTAGAGGTAAGGATTCTCTG GATGGGATGtagggccgtccacatagtacgtacgcactaaaatgtcgaaa atcgagtaccccctcccccctgtacgcaagcgtacgcaaatggctatatc CCCTCTgttaagtacgtactttttcattcaccccccccccccccctgtac gcaagcgtacgcaaatggctatatcccctctggtaagtacgtagtttttc attcaccccccccccccccctgtacgcaagcgtgcgcaaatggctatacc ccctctGGTAAGGGCGTGTTTTttccttcccccccccccccctcggttga agaaaatttagaattcaaatcgtttggttcggacctttattccatacatg aaactcaatgtttatcaagaaactttttcttttccttaatGCGTATAAca agcgtaaaagtcgacaaaaaaacaaaaagggctatgaaaaaattttctct gcgcacgtacattttcctttgacccctccactccccctgtacgcaagcat acgcttttgagaagaccccccctcccccgttagtgcgtacgtactatgtg gacggccccataGGGTGAATTCGGCCAAGTAAGAACGGACTTTCATAATA CCACGATACAAAGTATTTGTAACCTTGTTAGCGATTAAAACTGAGACGAG GTTTAAGAAGCTGTTCTCGTCATGGAGAAACCtcgtaaaatactttctat aatacTGTGGTTAAGTCCCTTGAGCTTTTATGTGTTGCTTTTATGAAAAG AGTCAACTGCTTATGTGAACTCCTCTGAGttttagcaatattttgaaaac gatctaAGCGTTGCTCGTGACTTAATTTATGAAAACAGTCTATTAGAATC TAACATTTCTGTggttcgaacaaataagattccccgatGAATGAAAACAA ATTGTTCTGGGGACCGGGTAATTTCTTACTTCTTCTTACTCCTTAGACCG TCACGCAAagtcttttttttgatttttttaaactttcatcaTTATAGGAG GTGAAGAATCGATACATCCTCGATCAAACCGTTCCCGAAGTATTCGAGTT GAGTACAGACAAACAACCATCGAGTGAAGATTATATTCCAATCGATTCAA TCAATAATCCGGATACTGACGAAGAAAATCCACAAGACATGAAAGAGAGC ACGCGACTGCTTGGTATCTGACGATTAGGTCTGGATTTATTGGTTAATCA TTTTTGGAAGATGTTTGAAATTGAATGGCTAGTCAAGTTAGTACTGGACT TAAAAGATAACCGTACAGATTTCCGGGTAATTAATCTGATGTTCGTTACT GGTGAATTTTCTGCGAGTTTAGTATGTAACTTTCGCGTCGAAATTTCTGG ATGTTAATTaatgttgttttgttacttCTCAACCCTGTTTAATGAGATTT AATGTCTAATTTGACATTACCCATTTTCAACTGGCAAATTCGTGGAGAAT TTGAAGGCGATGAACTTAAGTCCTAGTGTAGTCTCTTCACGTCctacaaa attatttttgttagtattttccAAAGGCGTTCACCTTTGAATTCGTGTAG CTCTATTGTGATCTTGTGGGGTAGCACGATTTTTCATATTATTCATATGT TTTTTAAcggttttattttctttttttcaatattgtaCATAGTAATGAAG AACATTATATATTGTaatttttcctgaattttctaGATGTATTATATTAT GAAGCTTTCTAACAGCAAATTGAGAATAGGTTTGTCACAACAGAAGTTGT CACTCAAAAAGATTGGAgctgaaaatgagtaaaattttcaaagattaatG ATTTTATACATACATGACGATGATGTCATTATTAATTCAAAgagttttca taatttttaaattcgAATAGTCAATATcatgtgtcaaaatttgaacatAA TTAGATAATTAGTTCAccaataaattttgagttttaaacgatTTCAGCCC CGGGTTTATGTTATGTTTCACAATAAACCCATCTGGACAACCTATATGAC ACttctaataaaattttattaaaagccAAGAANctctagtttttccgacc cttacagtgcatttgaggtgccttgaaaaagacacccttagtgcccgcac atacccgtcggtccttttgcccagctgccccccccgggattaAAAGCCAA GAAGTTTCAAATCGTTTTGGGCGTGGTGGTAGGCTCTACACCCTAGGCTA GGGCAAAAAGAGTTTTGAATTTGTTCCTTGTCTTTTTAACATGAGATATT CTATAATGCAAACTATATTTTTAACATGATATTTATCTTTCGTTCTGTAT CTAAATAGTTTTTTAGAGGGTAAACATTCATTGTGTAATTCTGCAAACAT TCGTGATGATGTGGAAACTTCTGACGGTCTTCCATAAAACAAATTGGGAA AAACTTCGGGGGTTTTACTGACTTATTATAGAGCAAAACTTTGATCCGTt gggaatagaccttttcataaattacgtcacgagcaacgcttacctcgctt tcaaaatattgctattgtGATTGAATCCCAGAGGAGCTCATAACAAGTCT TCTCTTTTTGAAAAGTAGCACTTTAAGCCCCAAGGAAcataatcaccttg gtaataatttcaaaacgaggcagtggTTGCACTCGAAATAATTTATGAAA GGTCTATAAGTAGTccgaaaacgaggcaagtgttgtttatgacgtaattt tgtATAATATGGAAAGACCTCTTCATCACAGgacaaaaaattataataaa ccACGTTCTTAGAGTGTCAATTTTAAACCATATCGTGTTTTGTAGGGACA TTGttgtatttttctatttttttcctaAATAAGAATTTCAGATATCATTT TCATCGGTAATAATTTCAATACAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030074XLOC_030074Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047208-exon-scaffold_123-1491911889:348478..349168TCONS_00047208-exon-scaffold_123-1491911889:348478..349168Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:348478..349168TCONS_00047208-exon-scaffold_123-1510915933:348478..349168Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:348478..349168TCONS_00047208-exon-scaffold_123-1575043694:348478..349168Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:354076..354129TCONS_00047208-exon-scaffold_123-1491911889:354076..354129Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:354076..354129TCONS_00047208-exon-scaffold_123-1510915933:354076..354129Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:354076..354129TCONS_00047208-exon-scaffold_123-1575043694:354076..354129Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:354329..354421TCONS_00047208-exon-scaffold_123-1491911889:354329..354421Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:354329..354421TCONS_00047208-exon-scaffold_123-1510915933:354329..354421Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:354329..354421TCONS_00047208-exon-scaffold_123-1575043694:354329..354421Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:354610..354705TCONS_00047208-exon-scaffold_123-1491911889:354610..354705Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:354610..354705TCONS_00047208-exon-scaffold_123-1510915933:354610..354705Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:354610..354705TCONS_00047208-exon-scaffold_123-1575043694:354610..354705Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:354971..355176TCONS_00047208-exon-scaffold_123-1491911889:354971..355176Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:354971..355176TCONS_00047208-exon-scaffold_123-1510915933:354971..355176Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:354971..355176TCONS_00047208-exon-scaffold_123-1575043694:354971..355176Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:355497..355627TCONS_00047208-exon-scaffold_123-1491911889:355497..355627Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:355497..355627TCONS_00047208-exon-scaffold_123-1510915933:355497..355627Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:355497..355627TCONS_00047208-exon-scaffold_123-1575043694:355497..355627Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:355844..355935TCONS_00047208-exon-scaffold_123-1491911889:355844..355935Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:355844..355935TCONS_00047208-exon-scaffold_123-1510915933:355844..355935Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:355844..355935TCONS_00047208-exon-scaffold_123-1575043694:355844..355935Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:356474..356560TCONS_00047208-exon-scaffold_123-1491911889:356474..356560Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:356474..356560TCONS_00047208-exon-scaffold_123-1510915933:356474..356560Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:356474..356560TCONS_00047208-exon-scaffold_123-1575043694:356474..356560Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:357327..357547TCONS_00047208-exon-scaffold_123-1491911889:357327..357547Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:357327..357547TCONS_00047208-exon-scaffold_123-1510915933:357327..357547Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:357327..357547TCONS_00047208-exon-scaffold_123-1575043694:357327..357547Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:358246..358328TCONS_00047208-exon-scaffold_123-1491911889:358246..358328Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:358246..358328TCONS_00047208-exon-scaffold_123-1510915933:358246..358328Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:358246..358328TCONS_00047208-exon-scaffold_123-1575043694:358246..358328Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:358564..358745TCONS_00047208-exon-scaffold_123-1491911889:358564..358745Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:358564..358745TCONS_00047208-exon-scaffold_123-1510915933:358564..358745Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:358564..358745TCONS_00047208-exon-scaffold_123-1575043694:358564..358745Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:358953..359163TCONS_00047208-exon-scaffold_123-1491911889:358953..359163Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:358953..359163TCONS_00047208-exon-scaffold_123-1510915933:358953..359163Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:358953..359163TCONS_00047208-exon-scaffold_123-1575043694:358953..359163Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:360175..362054TCONS_00047208-exon-scaffold_123-1491911889:360175..362054Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:360175..362054TCONS_00047208-exon-scaffold_123-1510915933:360175..362054Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:360175..362054TCONS_00047208-exon-scaffold_123-1575043694:360175..362054Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:348478..362054 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.16997e-08 0 8.26581e-10 1.11797e-09 2.90633e-10 0.619966 1.74549 0.425016 0.424272 0.336822 0 0.278136 0.387305 0.289089 0 0.0884901 0 0.112948 0 0 0 1.85347e-09 0 9.92623e-11 0.284951 1.65425 3.37397e-09 1.27383e-07 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047208 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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