TCONS_00047179 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047179
Unique NameTCONS_00047179
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1641

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047179 ID=TCONS_00047179|Name=TCONS_00047179|organism=Clytia hemisphaerica|type=transcript|length=1641bp
TGATGGTTGCGGAAGTGGAATATTGTAAATTGAAATACGCAAATGCAAAA
CATTGTTATGCTTTCGAAGAATCCAAcaagaattatgtttttgattccAT
CACCTTCAATAAAGCTATCATGAATTGTGGAGCGAAATTAGTGTCGGATG
AGTTCAGAGGGTTCAAAGGACGTGTTCTTACTTTGAACGATAAAGATGAT
AAATGTTCAGCAAACCAATTTCCTTCCGTTGATTTGGGACCTTTCAAAGG
TGAATGCAGTGCAGATCCAACACTTTGCACAAATGGAATCACCATTTCTT
TTTGGttgaaaatggaagaaaatgtaATCGCAAAAATGAAAAGCAAAGGA
TTCAACGAGTTTTACGTTTGGGCCAGTGGTGGTCTTCAAATCAAAAACAG
AGGTTATGCACTGGTTTACCGAAACGGTGGCTTTGAGTTACATTTACAAC
ACAGTGAAGGTGGTCACGTgattaaaatgacgtcatttgtttaTTCAAAA
TGGTTCCACATCTCTTTCACTTGGTCAGCATCAGAAGGCCTCCGTTACTA
CCAAGATGGTGTTTTAAGTGGATCATCAACCTCCTACAGTAAAAAATTTG
CTGCTTCTTCGCAAACATCGATGACTATTGGGAGACTCAATAACGGtgta
aaaaatgcaaaacaaaATTCATTTGCTGACTTCAGAATGGACGACTTGGT
GATTTATGAACGTATTTTGGCTCTCAAGGAGATCGAGTATATGGCTGGGA
AGCAATACGCATTGACTTCGAATATTTATTATTACGCACGATGGTTTTGG
GCATGGAAACGATTATGGCACCACCACGAGGGTAATGGAGAAATCATGTA
CTCGCCAATGTACTTCCAACAAGATTCCATCAATAATGCCGGAATATTAA
AGAACAAACCACGACTAGAGTTTTCATCTAAGAGAGGGTACCATTTACGG
ATCAGAGAAGCAACTTATGCATACATGGGCGATTACAAAGGAACTTGTAT
CAGTGATCCAGACCTTTGTTTACAAGCTTCTGATGGAATGCAAAATTTAC
CGAGTACAATGCAAAAGAAAACTCTTCAAGCCGGTCTGACCGTCTCCTTT
TGGCTGTCCAGCTACCAAGGGTCAAATGGAAAAGGCGGtgcaattaaaaa
atattattacatTTCTAGCGGTGGCAAAATGAGCAAAGGTTTCTCGTTAT
ATTATGATGGGAATGCACAGAAATGGTATCTTTTGCTTCGAACGAAGTCT
CACTATTACGAAATAGCCTTCACTGGAATTACATTCGCTACGTCAAAAGA
AGAACAATGGGTTTTCTTCGCTTTCACTTGGTCACTTGAAGGTGGCGTAA
AGGTGTATGTTAATGGAGAAAACATCCAATCAATGACCCCGAAAGAAGCC
AAAGCAGAACCCACCTCAAAGGACCAATTCACCAAACTTTACATTGGCAC
TAGAAATGATGAACCGCAATTcctgaaaaatgttttctcaaTGAACTTAT
TGGCTATTTATTACTATGAACTACCCAAAGAACTTATCGTCAAACTTTAC
AATGATGAAGATGATAAGGAAGCTGAAAAACCGGAAGTGGTTGCCCCTCA
ACCTCAAAAGCCTGTGCCAGCTCCTGGAACCCCAACGAAAG
Run BLAST on NCBI

transcript from alignment at scaffold_123:102270..113884+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047179 ID=TCONS_00047179|Name=TCONS_00047179|organism=Clytia hemisphaerica|type=transcript|length=11615bp|location=Sequence derived from alignment at scaffold_123:102270..113884+ (Clytia hemisphaerica)
TGATGGTTGCGGAAGTGGAATATTGTAAATTGAAATACGCAAATGCAAAA
CATTGTTATGCTTTCGAAGAATCCAAcaagaattatgtttttgattccAT
CACCTTCAATAAAGCTATCATGAATTGTGTAAGTAAAAGTTCATTGTGTA
TTCTTTGTACGTTGTAATAATCGGTACCATGTGATAATTCTACAGGGTGG
CCAAAAAAATATGGTCAGCCAAAATTGTTCTACTTGTAGAGCAATTAGTG
CGATAGGAATTATATTTCTCTTTTGTTACATAGTTGCGTTGGAAACTTCA
TCATAAGCGCTCCCACTAGACACCTTTCTCGTGTCAGATACATAATGCAT
TCCACaataatttttcattgtttgaggCATTTCATTCAGATACTTCACTT
GCCTTAATAAGAGACCATTCCCTTATAAATAACATTTTGAACAATCTGGT
TACGTATAATGAATGTAGTCTGAAAATTGATAGAATGTCTTCTTCTACCC
CAGCctccaacctcgttccctgggcccggttgttcaaaaaatCGATTAGA
TTAAATCCCGATTAGCGCTAATCGCGATTTAATCTGGACTTATGCTAATC
GGCcgctaatccacttttgaacaaccgggccctaTGCATTATCTGCTTTT
GATGCTTACGCTGGCACTTGTTTTGAGAACtagcatcagccaacaccagg
gttttctctggcgtcaatcagtaacataaataaagcctgggatacacggg
gacgaggttgcccAGCCCATGTTAAGCTTAATATCATTTTACAATTCTTC
CGATTCTGTGAAATGACTTTCCATTAATTCATCTACTGTGATGCTCATGT
ATTAGCGAGATAATTACTTCGATAACGAAAACaaattttcggaaaacaag
CAGTACCCATCTATCTTCTTAGTAGAAAGAAAAATTCGctcccgggtggg
cttgaaccaccaacctttcggttaacagccgaacgcgctaaccaattgcg
ccacggaagCTTGAAGTCCTAGAAAAGGCATATAGAAATGTTTTTTAATC
ATTTGTATAAGTGTTTGTCAAAGAACATCAAtcaaaataatgacgtcata
ttgTCAAATCTTATTAAGCAATTGTTTTTGTGGTTTTTCATATCAAATTG
CATATCTCTCAATGAGATATAAATGTCCTCCTAGATGTAATTTCATAGGC
CTTTCACCATGTCCTGTTGTCGTCCTAATCTACTTTTAACTACATTTATA
TGTTTGTTTTACGACTTCGAGattgtatttcccaaggaaagtAGACTAAA
TCAATGTTTTTCAAAACCATTTCTTGTTCTTCTTGAAATTGTTGAAACCA
TTTGCCAAGGGTAATAGGCTGAGAAATTATTCCTTgtttttttcaaggaa
aattaacTAAGCTGGTCTACTTGTATACTTGTATTAGCCAAGGATATGAA
CTGaaacaatttttatttcaataaggAAAATTTACAGAAACTTCTATTTC
CAAGTGAAAACCCAAGGATAATAAACTAAACCAATTtcgtgtatttttca
aggaaaatgaaccAAACCAATTTCGTGTAATTTCCAAAGAAAACCAACTA
AGGCAATTTcgtgtatttcccaaggaaaatgaacTAAGCTACCAAGGAAA
ATCAACTATAAACCACTCGTGTATTTCCtaatagactggagtcgtttata
atgcatgtaatactaataataaacacaaataatgatacgggatttacttt
gtataaacgactggaagaatccggtgttccagccttatagataccgggcc
tagctacgcagaaacttgcgtagcgagaaaacaatttatcaagcaacaac
aNcagaaacttgcgtagcgagaaaacaatttattaagcaaaaacaaactc
tcaaaataaaatcagctcaaatgaaacatttttaacacacaaatccacac
aaattttattttcaagaattttttttgagctggaaaaaattttaattgcg
atattgacactttttttttgtttggagttagtgcacaaaggtttctagac
gactaaaatttactttttttgctttatttctaatatgtctgaattagtcg
tctagcttgctagactaattTCCTAAGGAAAGTGAACTAAACcatttttt
tgtatatttccGGAGGAAGATTATTTTTGCGAGTGACTTACTTTGTTGAG
ATAGTATCTTTTTGACGAGAACTTATTTCTGGCGAATTTTTGCCAAAGTT
AAGCGCTCGTGCAAGGTTATATATTATTGTATGTATTAATTTTATATTTG
CAGGGAGCGAAATTAGTGTCGGATGAGTTCAGAGGGTTCAAAGGACGTGT
TCTTACTTTGAACGATAAAGATGATAAATGTTCAGCAAACCAATTTCCTT
CCGTTGATTTGGGACCTTTCAAAGGTATGTATTTTTGACCTCTGAAATCT
CCCCTTCCGATATTGTTAGATGTTGgtaacttttttaaagaaaatatgta
CTCTAAAGGTTCTTATTTTCGTTGTTTTCGAACCTGCGTGATTAGCCTTA
ATTTTAGACTCAATAATATTAATGAGttattagaaatagaaaaagcttaa
aatagtTATACTTGTCGCCAGGAACCATGGAAGgctgttatatttttcta
attttcaaattttgcatttaTTATTTGGTGGCATGTTACCGCTAGAATCA
TTTTATCACAGCTCTTGCTAAGGTTTCAGCGCCACAAGTCAGGTGTTCCT
GCCGCCTTCCTATATTTCCAGTCAATTCGCAGATTAGCGAGTAGGTAGGC
TCTGCCGTTAAAGCCATTAAAGGACTGTCTAAAAGATTCCTGTACTAACC
ACTTGAAAGGTCGATTCTATCTATATGTCTGTTTAGAGTCTATGTCAATT
GTCAGAGGgttgattatttttattttgaaactcaTTACCAGGTGAATGCA
GTGCAGATCCAACACTTTGCACAAATGGAATCACCATTTCTTTTTGGttg
aaaatggaagaaaatgtaATCGCAAAAATGAAAAGCAAAGGATTCAACGA
GTTTTACGTTTGGGCCAGTGGTGGTCTTCAAATCAAAAACAGGTACGGGT
ACGGTTGTCAGATTTCTTTATTCATTGTCGTTCCCAGTTCTTGGGGAATT
GCAAGGCCCGCGGAATCGGTCAATTGATATTAGACTTTGTCAACTTATCT
GTCTTAACAATCGTGGGAGGATTTCCTCAAATATAGATGGAAAATAACCT
GTTTTTTTTTAGGGCAGAAATTTGTCAATTACAGCTTTAAACCCTATAGA
TACTTTCATAACTCAAATGTCTTCTATTGGGGATAGGAGTCTTCTTTGAG
ATAAAGTTGTCTAGGAAACTTTTTAGGGCTCAATAGAAATAATTTACTGC
TTCACTTTTTAGAGGTTATGCACTGGTTTACCGAAACGGTGGCTTTGAGT
TACATTTACAACACAGTGAAGGTGGTCACGTgattaaaatgacgtcattt
gtttaTTCAAAATGGTTCCACATCTCTTTCACTTGGTCAGGTAAGAGATG
CATATTTTCTTTTGGTTAGGTTCTCACATAGAGATTTGTCATAGCAACGC
GTGTATGTTGGAATGACGCAATGGCGGGAGGGGGAGTTTAGGGGGTAGCA
ACTNTTCGCATAGAGATTTGTCATAGCAACGCATGTATGTTGGAATGACG
CAATGGCGGGAGGGGGAGTTTAGGGGGTAGCAACTCCGCGCGGCCATTCC
GTCAATTTTTCCGCAATTTTCTTCACActgttaaaatgaaaaatgaaatt
tcttttcAGTCGAAAATTCTgaagattttgactttttggttCCAATTCCG
AAATGTCGGAATTCCGATCGATTTTTTTCGCTTGAATTCTCCTGTATCCC
CAGTTTTCTATCTTTGATAGTGCAGCTAAAGTCAGcgattttgttcaaat
tttcggTGATTTTCGCACAAATACCCGTTCCTCCGCCAAACGCAAAACCT
CTCCAGCTATTAAAACTCAAACTTAAAAACTTGTCAAGTTTACCTAATAA
TTCCAGGCAACTGGTGTACTATCTACATTTCATATTAGTTtaagtatttt
ctttattttgattttcaattacCTCCATGATATTGAAAACTTTAAATATC
TTTTATACAGCATCAGAAGGCCTCCGTTACTACCAAGATGGTGTTTTAAG
TGGATCATCAACCTCCTACAGTAAAAAATTTGCTGCTTCTTCGCAAACAT
CGATGACTATTGGGAGACTCAATAACGGtgtaaaaaatgcaaaacaaaAT
TCATTTGCTGACTTCAGAATGGACGACTTGGTGATTTATGAACGTATTTT
GGCTCTCAAGGAGATCGAGTATATGGCTGGGAAGCGTAAGACAAAATTAA
ATCTTTGGGAGGAGAGTACTATTTTGGTGACAGCGGGGTATAACGTagga
tagatagatagatagatagatagatagatatgccctccgatgcatcggaa
tgggtcctacccacggtggagtaggaatcacagcgcaagcagacattgcN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNagagccatggtgtataccacgacactcgaacta
cacgggagaacggatgtcctcgcaggtgtagaacctcctgAGTGTCAcgg
cacaccacaatgtctgaaatatctacccatactcttgtatcagagttatg
gtacccaattcccctcaaatggcatgggttgacccgggcgaaggagcatt
cacttgccaagtgaatcgtagtgccacggtgggtatcgaaatcgagcctc
ctggacagaagtcaagcacgataaccactacaccactACGCCTACACGGG
GTATAACGTAATGACTTGATGAAGTCTAAATGAAGATTAAAATGCACCCT
TTTTAGCAATTATTCTATTACGCTGACACTGTGTCAACATTTAAAATAGA
GTACTTAGTGTGAACGGACCTTTTTTATGTTATTGTATTGAGGGTCAAGA
TTTTTATTATCAactaaaatctaaaaagttgaaatttgtgTCTCCAACTA
GAATTTAAATCTTTCAAATAAATCCATAATGAATTTTCGAATAAATCCTC
ATTTCAAACCGTTAAAATTTATTAATTAATATAATCTTATACGAACTTAA
AATTTGGGATCTGTTCAAGACTTCAAGGTTACAAACGAAGAAATCACTTC
TCATTTCAGAATACGCATTGACTTCGAATATTTATTATTACGCACGATGG
TTTTGGGCATGGAAACGATTATGGCACCACCACGAGGGTAATGGAGAAAT
CATGTACTCGCCAATGTACTTCCAACAAGATTCCATCAATAATGCCGGAA
TATTAAAGGTACACCTTTCATTTAATGTCTTAATGAGATAATATCAATGT
TAATactaaaacaaacttttttatcagtaaaattattattaaatcAGAAC
AATCCATCACCAACATTATGAAAGACTTTCTTATTTCCGAGGAAACATTT
TAGGTGCATTTTCGGGGAATTTTCCGCTTTTTCCTCCGGCGGCATATCgg
caaaagtttttttcctGCTTATACAATAGTGTAGAGAAAAAGCAACGACC
GAGCGAGAACGTTCCTCTTGTACATAACCAGAGTGTTGGCTATTTTTCCG
TTGTAAAgtggaaattggaaaatttgccTGAGAATGAGAAAGTTAAACAA
TTTCACcatctttattttgatattcCCGTGTGTTTTCCCTCTCTTCGTTA
TTATTTGACTATTTTACAGAACAAACCACGACTAGAGTTTTCATCTAAGA
GAGGGTACCATTTACGGATCAGAGAAGCAACTTATGCATACATGGGCGAT
TACAAAGGTActgaaaggttttatttttacaaagtgttcaaaatatgttt
catatcaggacggtgtctccctattgctgtattatgctgatataagcaaa
aaatgtttttcttctcctctttttgaccaatcttgctccacatccgtgtc
aattcaatgtgaaaaagcttgtaaattaaaattgatgagtaagcgaACGA
TATCActctattttaaaaacaaaacctctaaAGTTAGACGTTTATCATCC
TTGTATCCAAAAAAGACCATTTACCCACATACATAGAAAGTTATGATTTC
TAGAAAAAGATCAGGGTCTGGCCTTGAacttgaattgaatttttttttca
ttttagttctGATAACACAGAGCCAGGCAACGTAATTTCTTTTACCCAAA
TCCATATCCTAATAAAAATTTCTCATATAGGTCTTAGTACATATAATATT
TATTGGACAATTTCCCTCTTAAGCCTTTAGTCTGGTGGAGATACATCGAC
GATGTCTTTTTGCTTTGGGAACACGGGCAAGAGTCTTTAAACGAATTTCT
GACATATCTGAATGCCGAGCATCCTTCTATCAAATTTACGGCAGACTTTC
CCGACTCAGAAATCAATTTCTTGGATGTTAAGGTCAGTCGTAAAGGGGAT
AAGTTAGAGACCGACCTCTATGTAAAACCAACTGACACGCACCAATATCT
TGATGCAACATCTTGCCATCCGGATCATTGTAAGACGTCTATACCATATA
GTCAAACATTAAGGCTAAACCGTATCTGTTCGAAGCCCGAGTTGTTTGAC
AAAAGATGCGATGATTTGGAAAAGTGGCTACTCAAGCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAAttgctctagggagacc
aggctgtaaatcagaacataaaatatctaaaactagactgtgaaataatt
tacagcctggatatccaggctagtattatacctgatgaagttctgaaaat
agaacgaaatatcgtaaaaaacaaactgtgttgattttacttttttgttc
acttaaTAAGAAAGACTATGTACTATGCTTTGGCATTAAATTGCGTCAAG
AAATCAAGACTCTTCAACAATTCAATGTTTGATACCTTAAGttaaaaata
tatcttttttttcttgtatttcttTGAAGGAACTTGTATCAGTGATCCAG
ACCTTTGTTTACAAGCTTCTGATGGAATGCAAAATTTACCGAGTACAATG
CAAAAGAAAACTCTTCAAGCCGGTCTGACCGTCTCCTTTTGGCTGTCCAG
CTACCAAGGGTCAAATGGAAAAGGCGGtgcaattaaaaaatattattaca
tTTCTAGCGGTGGCAAAATGAGCAAAGGTGAACATTTTAGTAACCCAGTT
TTGGATGACCTAAACTCTTCATAAAGCCTTATATCTAAACTTAGTGCTTT
ttctttggaaaggttgaaTAACGAAAATGCACTATTTGACGTTNCTTATA
TATCTAAACTTAGTGCTTTTTCTTTGGAAAAGTTGAATAACGAAAATGCA
CTATTTGAAGTTTGGGCTTTTGTAGGGACATCTTTAAAGTCCATAGAGTC
CTATAACTTTTCGTTCAAAGATATTTCTAGGTGAGCAAGTAGGAGTGGGC
TCATATGGAGCTTTTTTAGCCGCGATTGTCTTAAATTTATACCCAAATAC
TCATTTTCCTCTTCATTTCAATTCAAGGTTTCTCGTTATATTATGATGGG
AATGCACAGAAATGGTATCTTTTGCTTCGAACGAAGTCTCACTATTACGA
AATAGCCTTCACTGGAATTACATTCGCTACGTCAAAAGAAGAACAATGGG
TTTTCTTCGCTTTCACTTGGTCACTTGAAGGTATGGTCTTGTAACATTTT
AAAATCAGAGGCCTTTTACTAATAAAATCACTGTTTTAACTTCACACGAA
AAATCTAAACTTTTTAATTGACGATGGACGTGACTTTTCGAAATATATCT
TAATTTGTTTACACATTGCAGTTTaagtttttctgtaaaaaatcttaGTT
ACATCCTAAGGTATTTGGACTTAAAATCATGTTGCGTTTTTTTGGGTCAC
CCCGGTAAAATCTTTGCTGGAAAAAGGAcatttcccgggggggggggCAG
CCAAGAAAAAtgactgacgggtatgtgcagGCACTAAGGGTGTGTTTTCA
AGGCatccgaaatgcactgtaagggtgggttATTTGCcgcctgcactgta
agggtacgaattactaaattctaacaaaaatgaaattgtccagtCCAAAA
TCCGACTGCCTCCCCGGGGGACATTTATAAACGTCATGGATACAAACTGT
GAATTTGCTACGAATAAATAATATTTTCCTTccattaaatttgattttaa
ataacAATGAATTTTACGAATCCACATCGTTAAAAGCCATAAGAATAAAG
TTTTAAAGTCTTGACGCAGTATTATTGACATTTAACACTATCAAGTCTTT
AGCAACACGGCAAGAACTTAGTCTACTATTTCATTGAAATGAATAACGAG
GAGAAACTTTTCTTTAACATTGCAGGTGGCGTAAAGGTGTATGTTAATGG
AGAAAACATCCAATCAATGACCCCGAAAGAAGCCAAAGCAGAACCCACCT
CAAAGGACCAATTCACCAAACTTTACATTGGCACTAGAAATGATGAACCG
CAATTcctgaaaaatgttttctcaaTGAACTTATTGGCTATTTATTACTA
TGAACTACCCAAAGAACTTATCGTCAAACTTTACAATGATGGTATGTCAA
GTGCTTAGGATTATCTTATTTGCGTAATAAGGGCTGGCGTTAGGGATCGG
AATTAAATTGAGCCCGGACtaaaaatggaatgaaatgaGCTTTGGCGTAT
TAAGAATATTAAGGGCCGGCTTAAAAGGGATCGGCGCTAAATTATGGCCA
GCGTAAAAAAAGCCGATAAGTTAGTTATTTTCGTTAAACGATCGATTTTT
GTGGAAACGTGTTTAAGATTTCCAGTCAAGACAAACATTATCATGTCAAT
GAAACAACTGAATTCCACTTCTCATTAACCCAACtaatgttttaaatatt
tccaTGATTCTTTCTGTAGAAGATGATAAGGAAGCTGAAAAACCGGAAGT
GGTTGCCCCTCAACCTCAAAAGCCTGTGCCAGGTAAAGCATCTAAAATAT
TCAAGTACAGTCGACTCGCGTTTATtggaacttctattattcgaatcttt
ctataattcgaacttattctcaGTTTCCATCAGTGAGAAACCTCTCTTAC
AATACTTTCTAAAATTCGAAtttctctgttattcgaacaaataagattcc
ccgtttCAGTTCGAATTATAAGAGTCAACTGTGTATGAATTAGTTAAAAA
CATCTAAATGTCCCGTTTACACCTTCTAAACCATCAGAAAGTTTCTGGAA
AATAGGTAGtagtacagtggagtctctttaactctaGTTTGCTGGTCGAG
TAGAATTTTatatacaaaacaacggtaaTTGATTCGATATGACTTCTCTA
CAGTAAGTACTAAGTAATAGTCTTATGCCGTACTATATTCAGCACGAGAA
GGGGgtttataataatattttagtgaaaggaTTAATTTTGGATATGATTT
TTATGTAGCGAGAAAACGTCATAGAATCGATGTTCAGAAAGCTTCAACTA
AACTTCGAACAAATGTTCCATTTCCATTTCATCCTTTATTTTAGCTCCTG
GAACCCCAACGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030069XLOC_030069Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047179-exon-scaffold_123-1491911889:102270..102397TCONS_00047179-exon-scaffold_123-1491911889:102270..102397Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:102270..102397TCONS_00047179-exon-scaffold_123-1510915933:102270..102397Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:102270..102397TCONS_00047179-exon-scaffold_123-1575043694:102270..102397Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:104573..104693TCONS_00047179-exon-scaffold_123-1491911889:104573..104693Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:104573..104693TCONS_00047179-exon-scaffold_123-1510915933:104573..104693Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:104573..104693TCONS_00047179-exon-scaffold_123-1575043694:104573..104693Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:105211..105361TCONS_00047179-exon-scaffold_123-1491911889:105211..105361Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:105211..105361TCONS_00047179-exon-scaffold_123-1510915933:105211..105361Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:105211..105361TCONS_00047179-exon-scaffold_123-1575043694:105211..105361Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:105682..105809TCONS_00047179-exon-scaffold_123-1491911889:105682..105809Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:105682..105809TCONS_00047179-exon-scaffold_123-1510915933:105682..105809Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:105682..105809TCONS_00047179-exon-scaffold_123-1575043694:105682..105809Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:106430..106654TCONS_00047179-exon-scaffold_123-1491911889:106430..106654Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:106430..106654TCONS_00047179-exon-scaffold_123-1510915933:106430..106654Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:106430..106654TCONS_00047179-exon-scaffold_123-1575043694:106430..106654Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:107529..107677TCONS_00047179-exon-scaffold_123-1491911889:107529..107677Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:107529..107677TCONS_00047179-exon-scaffold_123-1510915933:107529..107677Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:107529..107677TCONS_00047179-exon-scaffold_123-1575043694:107529..107677Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:108089..108176TCONS_00047179-exon-scaffold_123-1491911889:108089..108176Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:108089..108176TCONS_00047179-exon-scaffold_123-1510915933:108089..108176Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:108089..108176TCONS_00047179-exon-scaffold_123-1575043694:108089..108176Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:111299..111496TCONS_00047179-exon-scaffold_123-1491911889:111299..111496Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:111299..111496TCONS_00047179-exon-scaffold_123-1510915933:111299..111496Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:111299..111496TCONS_00047179-exon-scaffold_123-1575043694:111299..111496Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:111847..111999TCONS_00047179-exon-scaffold_123-1491911889:111847..111999Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:111847..111999TCONS_00047179-exon-scaffold_123-1510915933:111847..111999Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:111847..111999TCONS_00047179-exon-scaffold_123-1575043694:111847..111999Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:112695..112910TCONS_00047179-exon-scaffold_123-1491911889:112695..112910Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:112695..112910TCONS_00047179-exon-scaffold_123-1510915933:112695..112910Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:112695..112910TCONS_00047179-exon-scaffold_123-1575043694:112695..112910Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:113239..113301TCONS_00047179-exon-scaffold_123-1491911889:113239..113301Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:113239..113301TCONS_00047179-exon-scaffold_123-1510915933:113239..113301Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:113239..113301TCONS_00047179-exon-scaffold_123-1575043694:113239..113301Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1491911889:113864..113884TCONS_00047179-exon-scaffold_123-1491911889:113864..113884Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1510915933:113864..113884TCONS_00047179-exon-scaffold_123-1510915933:113864..113884Clytia hemisphaericaexon
TCONS_00047179-exon-scaffold_123-1575043694:113864..113884TCONS_00047179-exon-scaffold_123-1575043694:113864..113884Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:102270..113884 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000809989	0	0.00871053	0.125632	0.17644	0	0	0	0	0.0147819	0	0	0	0	0.130878	0	0.274579	0	0.212917	0.135952	0	1.39794	0	0	0	0	0.40423	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047179 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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