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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047115 ID=TCONS_00047115|Name=TCONS_00047115|organism=Clytia hemisphaerica|type=transcript|length=1024bp
ctactttagagcacttacaaatcgatcgtggtttcaaaacttcctaggga
atttcccatttgtctcaaatatttcttgaaggattgtagatgacgtcatc
aagtggctgggcaaaaaaatatttttttggaaatattctAAATCTGATGT
TCCCAGCGAAAAGGTCTTaaaattctgatgaaaattgaggtacaaaacat
gccttcaaaatgtttaaatcaaaagttatgaatgttgaaagttctttgat
gatgtcatcataagccttttcaggcaaaacttaaaaagctCGTAATTTCA
GAACAAGTTGACCTTTTGATGTTTCATGTATGAtatcatatcaaaattca
atGCTTATTCTGATTTTGATgctaaaattgaattaaaagctttaaaccCT
ACAGAATAATAAAACTTAGATTTGGAGATTTCCAAGGCAAATCAACGCAA
TGTTCTCCCTACAGGAACGCAGTGCACAACcgattatttttttggaaatt
tcaagccTTCCTTTGTCGTTTAGACACAACCATCAGAGGGaacatctgaa
gtattcttacgtttttatgtgctaacagacctcactacaATTATATTTTG
TCAATTTGAGGAATTGAAATGTAAATGTAAACTGATGATTTTGCTCAGTT
TGAGGAGAAGTTTGGATTTTAAATGATTAGATGCTATATTTTTCGTCTTT
TATATTCACATTCGcaattttaatatattttttagttttaatttttacGC
CATTTAGCGATATCTTTATGtaaagatttatttttcatttttttaaataa
cttttcatAGAAATTACGTTACGAAATTATTGCTATGGTATTGTCATTGA
TTCCCAAAGGAGTTTATAGGAAGTTTACTCTATTTCCAAAAGTAACACTT
AAAGACTCTAAGGATTGAATAACCTTGGTAatagtttcaaaacgaggcag
tttTTGCACTTTGAATAATTTATAAAAGGCCTACAGTATGTGGCCACCAA
AACGTCGATCGAgactaaaatttc Run BLAST on NCBI transcript from alignment at scaffold_121:46020..47043 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047115 ID=TCONS_00047115|Name=TCONS_00047115|organism=Clytia hemisphaerica|type=transcript|length=1024bp|location=Sequence derived from alignment at scaffold_121:46020..47043 (Clytia hemisphaerica)
gaaattttagtcTCGATCGACGTTTTGGTGGCCACATACTGTAGGCCTTT
TATAAATTATTCAAAGTGCAAaaactgcctcgttttgaaactatTACCAA
GGTTATTCAATCCTTAGAGTCTTTAAGTGTTACTTTTGGAAATAGAGTAA
ACTTCCTATAAACTCCTTTGGGAATCAATGACAATACCATAGCAATAATT
TCGTAACGTAATTTCTatgaaaagttatttaaaaaaatgaaaaataaatc
tttaCATAAAGATATCGCTAAATGGCgtaaaaattaaaactaaaaaatat
attaaaattgCGAATGTGAATATAAAAGACGAAAAATATAGCATCTAATC
ATTTAAAATCCAAACTTCTCCTCAAACTGAGCAAAATCATCAGTTTACAT
TTACATTTCAATTCCTCAAATTGACAAAATATAATtgtagtgaggtctgt
tagcacataaaaacgtaagaatacttcagatgttCCCTCTGATGGTTGTG
TCTAAACGACAAAGGAAggcttgaaatttccaaaaaaataatcgGTTGTG
CACTGCGTTCCTGTAGGGAGAACATTGCGTTGATTTGCCTTGGAAATCTC
CAAATCTAAGTTTTATTATTCTGTAGggtttaaagcttttaattcaattt
tagcATCAAAATCAGAATAAGCattgaattttgatatgataTCATACATG
AAACATCAAAAGGTCAACTTGTTCTGAAATTACGagctttttaagttttg
cctgaaaaggcttatgatgacatcatcaaagaactttcaacattcataac
ttttgatttaaacattttgaaggcatgttttgtacctcaattttcatcag
aattttAAGACCTTTTCGCTGGGAACATCAGATTTagaatatttccaaaa
aaatatttttttgcccagccacttgatgacgtcatctacaatccttcaag
aaatatttgagacaaatgggaaattccctaggaagttttgaaaccacgat
cgatttgtaagtgctctaaagtag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047115-exon-scaffold_121-1491911889:46020..47043 | TCONS_00047115-exon-scaffold_121-1491911889:46020..47043 | Clytia hemisphaerica | exon |
| TCONS_00047115-exon-scaffold_121-1510915933:46020..47043 | TCONS_00047115-exon-scaffold_121-1510915933:46020..47043 | Clytia hemisphaerica | exon |
| TCONS_00047115-exon-scaffold_121-1575043694:46020..47043 | TCONS_00047115-exon-scaffold_121-1575043694:46020..47043 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_121 | supercontig | scaffold_121:46020..47043 . |
Blast
The following BLAST results are available for this feature:
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