TCONS_00046943 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046943
Unique NameTCONS_00046943
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1814

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046943 ID=TCONS_00046943|Name=TCONS_00046943|organism=Clytia hemisphaerica|type=transcript|length=1814bp
TTCGATTGTTAAATaatcgaagtacttcgattatttaagcgaatttttcg
cttaaattcgattatttaagcgaatttatttttgagaagatcccttagtt
aaaaagaaaaagttttttttaaatgggtCGTCCTGGAGGTCACAATGGTG
TAATTAATGATTCATTTGCAAAGAAATATGCTCTTTGTTGTCTTTCTGCA
ACAGTCGCTGAATCAGTAACTTATCCCTTGGATATCACCAAAACAAGACT
TCAAGTGCAAGGCGAACATGCATCAATAAATACTCTAGGCAAAACAAAAT
ATCGTGGAATGGTTAAAACTGCAGCTGGAATAGTTAAGGAGGAAGGGCTC
TCAAAATTATGGCGAGGAATTCAACCAGCAGTGATGCGACATTTGGTGTA
CACTGGATGTCGAATGATGTTTTATGAATATGCAAGAGAAAATATCCTTG
GCAAAGATCCTGATGGTTACTTCCCTTTTTGGAAGTCGCTGATTGGAGGA
ATGACATCAGGAGCATTGGCACAGTTTCTTGCATCACCAACAGATCTGGT
TAAAGTTCAAATGCAAATGGAAGGCAGAAAAATGTTGGTGGAAGGAAGAC
CTTCAAGATATCGAGGTGTTTCGCATGCGTTCCTGCTACTGGCAAAAGAG
AATGGTGTTTTAGGATTGTGGAAAGGGTGGCTACCAAATGTTCAAAGGGC
TGCACTTGTCAATTTGGGAGACCTCGTGACCTATGATACGGTCAAACATT
TCTTGCTACGAAACACAAGTTTAGAAGATAACTATTTCACCCATACTCTT
TCAAGcatATGCTCTGGTCTCGTTGCAGCCACTGTCAGTACACCGGCAGA
CGTGGTCAAAACTAGAATCATGAATAATCCTGGTCAATATAGAGGATCAC
TAGATTGTGCTATGAGAACGattCAAAAAGAAGGATTCTTCTCACTTTAC
AAAGGATTCGTACCAACTTGGTCTCGATGTGCCCCTTGGTCACTGACGTT
TTGGTTGACCTACGAACAAATTCGAAAATTGTCTGGTACCGCaagctttt
gaaaaacaaaagtttaCTAAGTGAATAGAGTTCTGCTGAAACGACGATGT
ATTGTCGATACTTGTATCATCATAAAAGACCTTTTCAGAAAGGTTTGGAA
TGTTACCGCTCTTATGAAAAAGCGATTTACCGGACTTGATATCAAGCATT
GATAGGCAGCCTAATTATCATCGCATAACAGGCGTTTAACATCATAGTAC
ATAAAAAACTCGCAAAACCCCTTAAGAATGGAAAGGCACAATTTAAGGCA
TATTTACAGAAGGAAACTTAAGCCTTTTGATCTTGTGACGGTGAAAAACG
ATGATCCTGCGACCAGAAAAGTgcttttttgaccaaaaagaaCAATGATA
AATGCCGTCGTTAAAAAGAAGTGTGTTTCGAAAAAGGATAGAGTATGGAA
ATCTAGTCTTGTCAGTAACATAACTGGAATGTCTTCCCGACAAAAAATAC
TAATACAAGCACTATTTTGAAGGTTATATCAAAGAGTTTTAAATATGACC
CTTTGTAACTGCAaggaaaatttttaatattttttcagattgtttttatt
attgttGATTATAATTATTATGTACATGTATTTTGATAATGTAGGTCTAT
TTTTACAAttacaattttttattcaagCAATTTGCTTGCTGACTTCAAAG
TAAGAGCTGTCATTTGAAACCTATCatgtaaaaattaaaacttaTAACAA
GATTTAGCttagtgttttcaatgaactcatttaaatatattttttaattg
aaacaGAAACTCGC
Run BLAST on NCBI

protein sequence of TCONS_00046943-protein

>TCONS_00046943-protein ID=TCONS_00046943-protein|Name=TCONS_00046943-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
MGRPGGHNGVINDSFAKKYALCCLSATVAESVTYPLDITKTRLQVQGEHA
SINTLGKTKYRGMVKTAAGIVKEEGLSKLWRGIQPAVMRHLVYTGCRMMF
YEYARENILGKDPDGYFPFWKSLIGGMTSGALAQFLASPTDLVKVQMQME
GRKMLVEGRPSRYRGVSHAFLLLAKENGVLGLWKGWLPNVQRAALVNLGD
LVTYDTVKHFLLRNTSLEDNYFTHTLSSICSGLVAATVSTPADVVKTRIM
NNPGQYRGSLDCAMRTIQKEGFFSLYKGFVPTWSRCAPWSLTFWLTYEQI
RKLSGTASF
Run BLAST on NCBI

transcript from alignment at scaffold_118:410621..419614-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046943 ID=TCONS_00046943|Name=TCONS_00046943|organism=Clytia hemisphaerica|type=transcript|length=8994bp|location=Sequence derived from alignment at scaffold_118:410621..419614- (Clytia hemisphaerica)
TTCGATTGTTAAATAATCGAAGTACTTCGATTATTTAAGCGAATTTTTCG
CTTAAATTCGATTATTTAAGCGAATTTATTTTTGAGAAGATCCCTTAGTT
AAAAAGAAAAAGTTTTTTTTAAATGGGTCGTCCTGGAGGTCACAATGGTG
TAATTAATGATTCATTTGCAAAGAAATATGCTCTTTGTTGTCTTTCTGCA
ACAGTCGCTGAATCAGGTAAAGTTCTATTATCAATTATTATAATATATAT
TTTTTCTTGATATACATATAAACTTAGTAGGATTACGTCATTTAAGCTAT
TATAAACACCTTGACAGGCTGGAATATGACTTCTTTCTGTTACTAGCAAT
AGCCAAACAGGGGTCTTATTCCAACTTTTCAGTGATTCTGTTAGGGAAAT
ACACAAACGCATATCAGGTGTTTTATAATGCAGCATGATGAAAAGTAACC
CTGAAAAGAAACTGACTCTGATTGACAATTATCGTCTTGAATAGTCAGAG
TTACTTATTTTTTGTTTGTTTGTATTTTATACTACAGATAAAAGTTTGTA
AATCTTTTTAAACATTCAATTCCAATTCTTTGTCAAAACCAATTAAGCAT
TCGAACCTTTCAGCTTCCCTTTCCTTTCAGAATTATTTGATCAAGGAAGA
TTTTTCGTACATTGATCAAAATTCTTTCATACACCACCCCTTTAACTCAT
TTCTTTTATCTTTAGCTCGCATAATTTATGTTTATAATATTTTATTGATA
AACCTGCCTTCTACCTTTGAAAATTTACTTTTATTACAATATACAAACTA
TTTTTATATGTAGGTGGATTGATTCCTTTTCAATGAAAAGTTAAGTTTTT
TGTGAAAATACTATTTCTTTATCATATTCATCGTAGTAACTTATCCCTTG
GATATCACCAAAACAAGACTTCAAGTGCAAGGCGAACATGCATCAATAAA
TACTCTAGGCAAAACAAAATATCGTGGAATGGTTAAAACTGCAGCTGGAA
TAGGTAAATTAACTGTTCATTTTTCGTCATCCTTTTACTTTACTTAAAAA
GTGCCATCCCTCATTCTTGTGATTATATCCGTAGGCTTAATAATGGGCTA
ACAGTGCTCTAACCTAGATTGTTTTGATGTCCGCCAGGGAATTCCCTCAA
TTGCTGTATACTTTAATCGTGGTAAGTTTTCATTTGTGGTTAGCCTACAA
AGGCTTATAACAGGTACATATAGTGCTGGTCGACAAAGATAAACATTTGC
TTATTCAAGTATAAACATGTTTTTTTTCTAGTTAAGGAGGAAGGGCTCTC
AAAATTATGGCGAGGAATTCAACCAGCAGTGATGCGACATTTGGGTAAGA
GAAAATATATTTGGAAGTTTTTTTCTATGTAATTTTATCTTACTAGCAAC
ATTTGTACCAAATTTTACCACCATACACCCACTAAATCAGGTTTTATTAG
TCTTTTGTTGAGGCATCTCATGTCATGTCAAGGCCTAGCTAAAACCCTGT
AAAATCTCATGGCATAACCCTTGATGTAGTTATCCAACTAACTTCAAATT
GGCAGGTTTTATGTATCAATAATATGTTTCAGAAAATTCTAAAAAAGCTC
CGAAAATTAATGACGTCATCAATGTTAAGTCATTACTTTTTGAAAATGCT
TACTCCACCAGCATGAATTTTAAAATTCAATCTCATTGTTATATTAGAAA
TTGACAAATATGTTATAGATATTCTTTTTGGCTTTTAGAAAATCAAAACA
GAATTAAAGAATTTTTATTTGTTAAACTTTAAAGGAACATAACAGTACTT
GCGAAATTTGTAAACAAACTCTATGCAGCGGATACAAAATCAAAACAAAT
GTCACATGTCAAAATCAAAAATCAAACCAAATATGGCTAATTTTGATTGT
TCAATTGTTTTACAAGTTTGTTTTGGACACGTGATTTTAATTGTTCTCTT
TAATGACACGTGGTTCGCGCAATGTTTACATTTTACTACTTTAATGTTCC
TTTAATTGCGATTTTAGTAGAGAATACTTTTTTACTGGTTAGCGGTAAAT
AGGAATCTTTGAGACGACGTTGCTACCTTTATGATGACGTCATCAACCCA
AACTTTGTTCTTTGAATTCATTTCATGCTAGAAAACATTTCTGCTAAGTT
TCAATTCCTTATACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTGAAAGT
AATTTTTCTCGAAATCTAAAAATTTTAAAAGAACCATTTCTGTTTCGTTG
GAAAGAAGAAAGATAAACTTAAATTTTGATGGGTCCTTTATTAAATTCGA
TTCGTTAGATTAAAAGTTATGCTCAATTAAATAAAAAAGTTACTTTCAGA
AAGTGCTCGAAAACGTTAAAAATCGACCTATCAAATTTTTATTTTAAATT
TGGCAATCGCAATAGCCTTTACATGATTAAAAGCATTTTTCAGTAACTAA
ACACATAAATTTTTAAAATGAAGGGTCGAAAGGGTTTAAAATCTTCATCA
AAATCAATTTAATTTACTTTTACCGAAATTTTCCTCTGGTTTTTGGTGCT
AGACTGGATAAAGTCTATGTAAGACTGGATCTACCTCGAAACCCATATTT
GATGTATTTTAATGAATTTTATCAGATTTTTTGGCCTTTTTCGACGATTT
TTCTTCTTTTCATTGAAATTTCAATCTTCCTTTATATAACAAAAGGTCAT
TTAGACAGCTAATTATCATTTTTAATGACTGAAACAAAAATACTGATGTA
TCATGTAATTATGCTTCTGTTTAATTTGATAGGTCGATTTTTAACGTTTT
TGAGCACTTTCTGAAAGTAACTTTTTTATTTAATTGAGTATAACTTTTGA
TCTAATGAATCGAATTTGATAAATGACCCATCAAAATTTAAGTTTATCTT
TCTTCTTTCCAATGAAAGAGGAATGGTTCTTTTAAAATTCTTAGCTTTCA
GAAAAATTAGTTTCAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTAGCA
CTTCTGGATCAAAAGTTATGCAAGGATGGTAGAAAACACCCCCGCTTAAT
AATAGGAACCCCAGAAAAGCTTGATTAATAGGGTTAATGGTTTAACAGGG
AAATACATTTTCTTTTCTCATTCTTTTCTTTCTTAGTGTACACTGGATGT
CGAATGATGTTTTATGAATATGCAAGAGAAAATATCCTTGGCAAAGATCC
TGATGGTTACTTCCCTTTTTGGTAAACATATTTTACTTAATATCAGCAAA
AAAATTATAATTTACAGAAACTGTTTTCAAAACAGCTGCAATGACAGATT
CAATATATTCCTCGTTGAACATTATGATAAACCTACACAATATTCAATTA
GCCCCCGTCTCAGAAAAGGACTGGGCCCGAATTTGCGGACGTTTTCACAG
TTTCACTTTCGTTTTCGGCTATGCGACAGCGTTTTCAGGCAGAAAGCAGA
GGAAATCTGTGAAATTATGGTAGGGAATGCTATCCTATTTTCCCAGTGTT
TCTCAAAATTGGAGCGAGATTATTGTTCTAGAAAGTTTATAAAGGCCTAA
TAGTTCCAGATTAGTATGATTTCATCAGAAAAAACATTTACACCAAAGCT
CCCTTATTGATATGTGAAGGCTACCAAAGATGGCAATTTCCTCCATCAGA
ACAACTTTAACATAGGAACCAAGGACAGTCAAGAAGTCTACTTTGTTGAA
AATTTGCACAAAATACTTAGAGAAAATGGTACTATGGAAGCCCATTCTAT
CCTCCTAAATGATAGTTGAAAGATCAGCAGTTAAGAGGGTTGATTAAAAT
AGAAATCAAAGCACACAATAAAGTATACATATATATTTGTCCAGAAAGAA
CTGGCATGTTGTTTGCTTTGTTTTGGTTTTTAAAAATATGTACTTATCAG
CCCTAAAAAAATACAAATTTGAATATAATGAGGGCAATGAGTCTGGTTAA
ATGTTACTATATTAACAAGAAAAGGATTACTGAAAAAATACTACTTTAGA
TGAACTAAACTCAAAAACTAAAACTCTACCATAAATTTACATTACGACAA
TTTAAAAATCTATCTTTAATAGCAACAAAGAAAATAATATGGCTCAAAGT
TTTAAAAACAGAGCTAGTCAGAGCTTCAATTCAGTAGGTAGAGAGCTCTC
AAAATTTGAAAACAGACACTGCATTGGTTAGAGAGAAAGATGTCAACCAT
CCACACATTTTTTTCGATTCGTGAAAAAAATAAAGTATAAAGGTTCTCTT
TTTTTTGGTAATCAATTCCAACAAACAACAATCAATATAACAGTTTTTTT
GAAAACCGTCCCACAGTGTTAACATTATCAACCAACAAAACCCACATCGC
CAAAATTGTAAAAATAAGTCAATATAGTTTCTATCAGCAATTCCTCGTAA
AATGTTTTTTTTCCAACATTCTGATAACAATCATGGCTGGAGGCATCATG
TGTAGAGTGACTGTGTGGCATTTCATTGCTTTTAATGGTCATGATACCAA
ACATCAACCAAACAAAACTATGACGCCAAGCCAAATCTGTCGATTAAAAA
TTTCCATGAGAATTATAATCAAAAGCTATCTCGTGAAATGCTTTTTTTAA
CATTCTGGATGTGTTCAATACATGAAAAGTCATTTGCTATCCCATTTGCC
ATGAGATATACGAGTCAACAAAACAACAAATCATGACAATTGTCAGTCGG
GTCTGCTACTAACATGTAATAGTTTTATTATAGCCGAGCTTGAGAATCCG
TATGCAGAACTTGTAACTTGTATTATGTGTATAATTATGTCAGTCGACTT
GAATCATGATACATTACTGACATTTCACTGGATGCATTTTCGCTGTGAAA
TTATCCGCAAAATTCGCTGACCGCGTTCCGAGACGGAGGCTACTTGATGA
ATACAGTATTAAAGGAAACTTATTTTAGCGGATTTGGCGAATTTAGACGA
AATTCGCCAAAATTAGTTCCCGCCAAAATTAAATATTTTGCTCACTCGCC
AAAATAAGTTCCCGGCAATATTAATTTTTTTGTTTCCTTGCTTATTAAAA
TAACCTCTGAAATTCATCAAAATTGCTCAAAATAAGGCAAAAAAGAACAG
ATTTACGCTGTCATTCGCCAAAATTAGTTCCCGCCAAAATTAGAAAAATT
CACTATTCGCCAAAATAAGTTCCAGCCAAATTTAAATTTTTTTTGGATAT
TTGCTGCCCGCTAAAATTAGTTCCCGCCAAAAAAAGTTCCCTTAAGGTAA
TCAATCTTTATTTGCAACAGGAAGTCGCTGATTGGAGGAATGACATCAGG
AGCATTGGCACAGTTTCTTGCATCACCAACAGATCTGGTTAAAGTTCAAA
TGCAAATGGAAGGCAGAAAAATGTTGGTGGAAGGAAGACCTTCAAGGTTT
TTACATTTAATATTATGTTCATTTACATGTTTTTTCTTTTATAAGCGAAA
CGTCTTATATAGCGGCAGACACAATTGCTTATAAAAAACATGTATCGAAG
AAGACAATTCAGTTTCGAAAATCTTTCAAGCAAAATATTATCATTTGAAA
AAACTTTTCTTTTGTGCTCATGTTTTTCATTGGGCTTCTTGAAATTATCA
TTCTATTTAAATGTCTGAATCCCTCACAAACCTCAAGCGTGTCCCTTGCT
TATCAAACATTCCAAATTAAGAGGTTAAAATTAGCATCATAAATCTTGTC
TTATCTCTGCAGATATCGAGGTGTTTCGCATGCGTTCCTGCTACTGGCAA
AAGAGAATGGTGTTTTAGGATTGTGGAAAGGGTGGCTACCAAATGTTCAA
AGGGCTGCACTTGTCAATTTGGGAGGTAGGATTTATTACTGTTTTGATAA
TGTTATTATTACTATATCAAGATGTTCCGCTTAAGTTTAAAAATATGTTT
TTCCCTCTAAAATTCAGGCCAAATTTGTTGCTAACCCCCTTCAAAGCCAA
AAAGATTTCAAAATTAGCCAATATACCAAGTCCCAGACTTAAGGCTATAA
CTCCTGACCACTTGATTTAAAAGAGCTTAAACAGAATGCTTTTAGAAAAA
GTGTAGAAATATCTTTCTAATGGTACCAAAATAATTGTCTCTCAAGCTTT
TATGCTAGTTTGAAGTTTTGAATTTAAAAAATAAAATGAAAATTTTCATA
TTATCAAAAAATGTTGCGCGCTGTAAAGGTTAAAAGCCCGTTAAGAGTCC
ATATTTCCTCAGAGATGAGAAGCGTTGCTTGAAAAGTGTTGTTTTTGTAT
ATTGTCAATTTATCATCAAATATTAAGTGCCATTACACGAAATTATATTT
TGTGCCTTGCCCTGGTGGAAGATTATGTATTGGTAGTTTCTTTTTTACTT
ATTTTCAGACCTCGTGACCTATGATACGGTCAAACATTTCTTGCTACGAA
ACACAAGTTTAGAAGATAACTATTTCACCCATACTCTTTCAAGGTAAGTT
TTTCAGACCCCTCCTTATCTTTATCATGTTCTATAATTTGGAAGAATGTG
GATTAAATGTTTTAGAAATTAAATGTTTAAATGATTAAATGTTTCCAAAT
CAGGAGCAATTCGATGCTAAGTTTCTTGTCGTTTTAATTTTGAAAAGATC
TTTATTGAAACAAAAGAATGTCAATATTATGCCGATACAATGATATCGTG
ACACAAAACAATTTATGCTCCTTTAAATAGTTCCATTTAAAGTAGTAAGT
GAGTAAGTTTGTGCCCGCAGTCGGAGGCGACCCGTAGGCTCCTCTTTCGA
TAGCTATCTACCCGAAGGTAGGTGAGGGCGCCACTCTTTCTCCCTGGATT
GCTCCTCTAACCCTTGATCCGTCTCTCAATTGCTGAACATCAAGCATAGA
GGCATCAAGTACCATTTTCAGAATGTTTGGTATGACCCGCCTAGGGGTAG
ACCCGACAACCTTGCGTACCGTAGCCGGATACTCTACCACTACGCTACGG
TCCATTTAAATTATTGGCTATTTTTTTTGAAAGGTCGCTTTTTCTCATTT
TCAGCATATGCTCTGGTCTCGTTGCAGCCACTGTCAGTACACCGGCAGAC
GTGGTCAAAACTAGAATCATGAATAATCCTGGTCAATATAGAGGATCACT
AGATTGTGCTATGAGAACGGTATCATATTTTTTCGTTGAAAATTTACTTT
GTAATACTATGAAAAAGGGTTTACAGAAGTTATTTTTTAGAATGATTTAT
TCCTGTCAAATGAATTGCCATCTTGATTATTATATTAGTATTCTCGTTTC
TGTGTCCTGTGCTCAAAATGATGAACATTATTATTAGGTTATACTTTTAT
TATGTGGGCTAATGCATATTATTCAGACAAAACTTGTCAGGCAAAAATTA
AATAAAATCTTTTATTTATTATTTTAGATTCAAAAAGAAGGATTCTTCTC
ACTTTACAAAGGATTCGTACCAACTTGGTCTCGATGTGTAAGACTAATTG
TCTTTCCTAACTTTCGAATCTAAGAAGTAACCCATGAACTTATTCGGCTG
TTTCTTTTTCTATTTGTTTTTCTTTTACTCAATCGGTGACTTTGATGAAT
GTCGGTAGTGAAAATGTAAGCGTTTTCCCATCGCACTGTTTGAAATCATC
ATCTCCATACACTTTTTTTATTTTTATGTATAGGCCCCTTGGTCACTGAC
GTTTTGGTTGACCTACGAACAAATTCGAAAATTGTCTGGTACCGCAAGCT
TTTGAAAAACAAAAGTTTACTAAGTGAATAGTAAGTCATTTCTTCATTGT
TGACTCGAAATCTTACGATTTTGAAGAGTAGGACGGGTTTTTCTGGACAA
AATTGTTGAATTGTCGATAATTGACTGTATGATAATTCACGTTGAGAAAC
TGGGGAGTCTACCAAGTGCGAAGCTTATGTTGAATACCAAATAGCTTGCT
CAAAATGGGAAATTATAGTTAGCTTTTGTGAAAGTATATATCGCTTCCGA
ATCATATAGTTTGAGGTTCTCAAAACTCAGATAATAGAGCAATGTGACTG
GTATCCTTCCAGCCTGCAAAAGAACTTAAATAAAGATAAATTTTTGCAGT
ACTTTTGTGTCTCAATGAGGAAGAAATGCGCGTCTATTATGTAATACGCT
GATTAACCAGCCCAACTCTTCAGGTTAACAGTTGTCTCTTGAAATAATTA
TTGTAAATATTTGTACCAAAATTATTCTTCGTTGTTATCACCAGCGTTTG
AATGTTTAGATGTCTTTTGGGTAATGGTAGTATTGTAGCACAACCTCAAT
TACATAGGAGTTCTGCTGAAACGACGATGTATTGTCGATACTTGTATCAT
CATAAAAGACCTTTTCAGAAAGGTTTGGAATGTTACCGCTCTTATGAAAA
AGCGATTTACCGGACTTGATATCAAGCATTGATAGGCAGCCTAATTATCA
TCGCATAACAGGCGTTTAACATCATAGTACATAAAAAACTCGCAAAACCC
CTTAAGAATGGAAAGGCACAATTTAAGGCATATTTACAGAAGGAAACTTA
AGCCTTTTGATCTTGTGACGGTGAAAAACGATGATCCTGCGACCAGAAAA
GTGCTTTTTTGACCAAAAAGAACAATGATAAATGCCGTCGTTAAAAAGAA
GTGTGTTTCGAAAAAGGATAGAGTATGGAAATCTAGTCTTGTCAGTAACA
TAACTGGAATGTCTTCCCGACAAAAAATACTAATACAAGCACTATTTTGA
AGGTTATATCAAAGAGTTTTAAATATGACCCTTTGTAACTGCAAGGAAAA
TTTTTAATATTTTTTCAGATTGTTTTTATTATTGTTGATTATAATTATTA
TGTACATGTATTTTGATAATGTAGGTCTATTTTTACAATTACAATTTTTT
ATTCAAGCAATTTGCTTGCTGACTTCAAAGTAAGAGCTGTCATTTGAAAC
CTATCATGTAAAAATTAAAACTTATAACAAGATTTAGCTTAGTGTTTTCA
ATGAACTCATTTAAATATATTTTTTAATTGAAACAGAAACTCGC

Coding sequence (CDS) from alignment at scaffold_118:410621..419614-

>TCONS_00046943 ID=TCONS_00046943|Name=TCONS_00046943|organism=Clytia hemisphaerica|type=CDS|length=9300bp|location=Sequence derived from alignment at scaffold_118:410621..419614- (Clytia hemisphaerica)
GCCCCTTGGTCACTGACGTTTTGGTTGACCTACGAACAAATTCGAAAATT
GTCTGGTACCGCAAGCTTTTGAATTCAAAAAGAAGGATTCTTCTCACTTT
ACAAAGGATTCGTACCAACTTGGTCTCGATGTCATATGCTCTGGTCTCGT
TGCAGCCACTGTCAGTACACCGGCAGACGTGGTCAAAACTAGAATCATGA
ATAATCCTGGTCAATATAGAGGATCACTAGATTGTGCTATGAGAACGACC
TCGTGACCTATGATACGGTCAAACATTTCTTGCTACGAAACACAAGTTTA
GAAGATAACTATTTCACCCATACTCTTTCAAGATATCGAGGTGTTTCGCA
TGCGTTCCTGCTACTGGCAAAAGAGAATGGTGTTTTAGGATTGTGGAAAG
GGTGGCTACCAAATGTTCAAAGGGCTGCACTTGTCAATTTGGGAGGAAGT
CGCTGATTGGAGGAATGACATCAGGAGCATTGGCACAGTTTCTTGCATCA
CCAACAGATCTGGTTAAAGTTCAAATGCAAATGGAAGGCAGAAAAATGTT
GGTGGAAGGAAGACCTTCAAGTGTACACTGGATGTCGAATGATGTTTTAT
GAATATGCAAGAGAAAATATCCTTGGCAAAGATCCTGATGGTTACTTCCC
TTTTTGTTAAGGAGGAAGGGCTCTCAAAATTATGGCGAGGAATTCAACCA
GCAGTGATGCGACATTTGGTAACTTATCCCTTGGATATCACCAAAACAAG
ACTTCAAGTGCAAGGCGAACATGCATCAATAAATACTCTAGGCAAAACAA
AATATCGTGGAATGGTTAAAACTGCAGCTGGAATAGATGGGTCGTCCTGG
AGGTCACAATGGTGTAATTAATGATTCATTTGCAAAGAAATATGCTCTTT
GTTGTCTTTCTGCAACAGTCGCTGAATCAGGCCCCTTGGTCACTGACGTT
TTGGTTGACCTACGAACAAATTCGAAAATTGTCTGGTACCGCAAGCTTTT
GAATTCAAAAAGAAGGATTCTTCTCACTTTACAAAGGATTCGTACCAACT
TGGTCTCGATGTCATATGCTCTGGTCTCGTTGCAGCCACTGTCAGTACAC
CGGCAGACGTGGTCAAAACTAGAATCATGAATAATCCTGGTCAATATAGA
GGATCACTAGATTGTGCTATGAGAACGACCTCGTGACCTATGATACGGTC
AAACATTTCTTGCTACGAAACACAAGTTTAGAAGATAACTATTTCACCCA
TACTCTTTCAAGATATCGAGGTGTTTCGCATGCGTTCCTGCTACTGGCAA
AAGAGAATGGTGTTTTAGGATTGTGGAAAGGGTGGCTACCAAATGTTCAA
AGGGCTGCACTTGTCAATTTGGGAGGAAGTCGCTGATTGGAGGAATGACA
TCAGGAGCATTGGCACAGTTTCTTGCATCACCAACAGATCTGGTTAAAGT
TCAAATGCAAATGGAAGGCAGAAAAATGTTGGTGGAAGGAAGACCTTCAA
GTGTACACTGGATGTCGAATGATGTTTTATGAATATGCAAGAGAAAATAT
CCTTGGCAAAGATCCTGATGGTTACTTCCCTTTTTGTTAAGGAGGAAGGG
CTCTCAAAATTATGGCGAGGAATTCAACCAGCAGTGATGCGACATTTGGT
AACTTATCCCTTGGATATCACCAAAACAAGACTTCAAGTGCAAGGCGAAC
ATGCATCAATAAATACTCTAGGCAAAACAAAATATCGTGGAATGGTTAAA
ACTGCAGCTGGAATAGATGGGTCGTCCTGGAGGTCACAATGGTGTAATTA
ATGATTCATTTGCAAAGAAATATGCTCTTTGTTGTCTTTCTGCAACAGTC
GCTGAATCAGGCCCCTTGGTCACTGACGTTTTGGTTGACCTACGAACAAA
TTCGAAAATTGTCTGGTACCGCAAGCTTTTGAATTCAAAAAGAAGGATTC
TTCTCACTTTACAAAGGATTCGTACCAACTTGGTCTCGATGTCATATGCT
CTGGTCTCGTTGCAGCCACTGTCAGTACACCGGCAGACGTGGTCAAAACT
AGAATCATGAATAATCCTGGTCAATATAGAGGATCACTAGATTGTGCTAT
GAGAACGACCTCGTGACCTATGATACGGTCAAACATTTCTTGCTACGAAA
CACAAGTTTAGAAGATAACTATTTCACCCATACTCTTTCAAGATATCGAG
GTGTTTCGCATGCGTTCCTGCTACTGGCAAAAGAGAATGGTGTTTTAGGA
TTGTGGAAAGGGTGGCTACCAAATGTTCAAAGGGCTGCACTTGTCAATTT
GGGAGGAAGTCGCTGATTGGAGGAATGACATCAGGAGCATTGGCACAGTT
TCTTGCATCACCAACAGATCTGGTTAAAGTTCAAATGCAAATGGAAGGCA
GAAAAATGTTGGTGGAAGGAAGACCTTCAAGTGTACACTGGATGTCGAAT
GATGTTTTATGAATATGCAAGAGAAAATATCCTTGGCAAAGATCCTGATG
GTTACTTCCCTTTTTGTTAAGGAGGAAGGGCTCTCAAAATTATGGCGAGG
AATTCAACCAGCAGTGATGCGACATTTGGTAACTTATCCCTTGGATATCA
CCAAAACAAGACTTCAAGTGCAAGGCGAACATGCATCAATAAATACTCTA
GGCAAAACAAAATATCGTGGAATGGTTAAAACTGCAGCTGGAATAGATGG
GTCGTCCTGGAGGTCACAATGGTGTAATTAATGATTCATTTGCAAAGAAA
TATGCTCTTTGTTGTCTTTCTGCAACAGTCGCTGAATCAGGCCCCTTGGT
CACTGACGTTTTGGTTGACCTACGAACAAATTCGAAAATTGTCTGGTACC
GCAAGCTTTTGAATTCAAAAAGAAGGATTCTTCTCACTTTACAAAGGATT
CGTACCAACTTGGTCTCGATGTCATATGCTCTGGTCTCGTTGCAGCCACT
GTCAGTACACCGGCAGACGTGGTCAAAACTAGAATCATGAATAATCCTGG
TCAATATAGAGGATCACTAGATTGTGCTATGAGAACGACCTCGTGACCTA
TGATACGGTCAAACATTTCTTGCTACGAAACACAAGTTTAGAAGATAACT
ATTTCACCCATACTCTTTCAAGATATCGAGGTGTTTCGCATGCGTTCCTG
CTACTGGCAAAAGAGAATGGTGTTTTAGGATTGTGGAAAGGGTGGCTACC
AAATGTTCAAAGGGCTGCACTTGTCAATTTGGGAGGAAGTCGCTGATTGG
AGGAATGACATCAGGAGCATTGGCACAGTTTCTTGCATCACCAACAGATC
TGGTTAAAGTTCAAATGCAAATGGAAGGCAGAAAAATGTTGGTGGAAGGA
AGACCTTCAAGTGTACACTGGATGTCGAATGATGTTTTATGAATATGCAA
GAGAAAATATCCTTGGCAAAGATCCTGATGGTTACTTCCCTTTTTGTTAA
GGAGGAAGGGCTCTCAAAATTATGGCGAGGAATTCAACCAGCAGTGATGC
GACATTTGGTAACTTATCCCTTGGATATCACCAAAACAAGACTTCAAGTG
CAAGGCGAACATGCATCAATAAATACTCTAGGCAAAACAAAATATCGTGG
AATGGTTAAAACTGCAGCTGGAATAGATGGGTCGTCCTGGAGGTCACAAT
GGTGTAATTAATGATTCATTTGCAAAGAAATATGCTCTTTGTTGTCTTTC
TGCAACAGTCGCTGAATCAGGCCCCTTGGTCACTGACGTTTTGGTTGACC
TACGAACAAATTCGAAAATTGTCTGGTACCGCAAGCTTTTGAATTCAAAA
AGAAGGATTCTTCTCACTTTACAAAGGATTCGTACCAACTTGGTCTCGAT
GTCATATGCTCTGGTCTCGTTGCAGCCACTGTCAGTACACCGGCAGACGT
GGTCAAAACTAGAATCATGAATAATCCTGGTCAATATAGAGGATCACTAG
ATTGTGCTATGAGAACGACCTCGTGACCTATGATACGGTCAAACATTTCT
TGCTACGAAACACAAGTTTAGAAGATAACTATTTCACCCATACTCTTTCA
AGATATCGAGGTGTTTCGCATGCGTTCCTGCTACTGGCAAAAGAGAATGG
TGTTTTAGGATTGTGGAAAGGGTGGCTACCAAATGTTCAAAGGGCTGCAC
TTGTCAATTTGGGAGGAAGTCGCTGATTGGAGGAATGACATCAGGAGCAT
TGGCACAGTTTCTTGCATCACCAACAGATCTGGTTAAAGTTCAAATGCAA
ATGGAAGGCAGAAAAATGTTGGTGGAAGGAAGACCTTCAAGTGTACACTG
GATGTCGAATGATGTTTTATGAATATGCAAGAGAAAATATCCTTGGCAAA
GATCCTGATGGTTACTTCCCTTTTTGTTAAGGAGGAAGGGCTCTCAAAAT
TATGGCGAGGAATTCAACCAGCAGTGATGCGACATTTGGTAACTTATCCC
TTGGATATCACCAAAACAAGACTTCAAGTGCAAGGCGAACATGCATCAAT
AAATACTCTAGGCAAAACAAAATATCGTGGAATGGTTAAAACTGCAGCTG
GAATAGATGGGTCGTCCTGGAGGTCACAATGGTGTAATTAATGATTCATT
TGCAAAGAAATATGCTCTTTGTTGTCTTTCTGCAACAGTCGCTGAATCAG
GCCCCTTGGTCACTGACGTTTTGGTTGACCTACGAACAAATTCGAAAATT
GTCTGGTACCGCAAGCTTTTGAATTCAAAAAGAAGGATTCTTCTCACTTT
ACAAAGGATTCGTACCAACTTGGTCTCGATGTCATATGCTCTGGTCTCGT
TGCAGCCACTGTCAGTACACCGGCAGACGTGGTCAAAACTAGAATCATGA
ATAATCCTGGTCAATATAGAGGATCACTAGATTGTGCTATGAGAACGACC
TCGTGACCTATGATACGGTCAAACATTTCTTGCTACGAAACACAAGTTTA
GAAGATAACTATTTCACCCATACTCTTTCAAGATATCGAGGTGTTTCGCA
TGCGTTCCTGCTACTGGCAAAAGAGAATGGTGTTTTAGGATTGTGGAAAG
GGTGGCTACCAAATGTTCAAAGGGCTGCACTTGTCAATTTGGGAGGAAGT
CGCTGATTGGAGGAATGACATCAGGAGCATTGGCACAGTTTCTTGCATCA
CCAACAGATCTGGTTAAAGTTCAAATGCAAATGGAAGGCAGAAAAATGTT
GGTGGAAGGAAGACCTTCAAGTGTACACTGGATGTCGAATGATGTTTTAT
GAATATGCAAGAGAAAATATCCTTGGCAAAGATCCTGATGGTTACTTCCC
TTTTTGTTAAGGAGGAAGGGCTCTCAAAATTATGGCGAGGAATTCAACCA
GCAGTGATGCGACATTTGGTAACTTATCCCTTGGATATCACCAAAACAAG
ACTTCAAGTGCAAGGCGAACATGCATCAATAAATACTCTAGGCAAAACAA
AATATCGTGGAATGGTTAAAACTGCAGCTGGAATAGATGGGTCGTCCTGG
AGGTCACAATGGTGTAATTAATGATTCATTTGCAAAGAAATATGCTCTTT
GTTGTCTTTCTGCAACAGTCGCTGAATCAGGCCCCTTGGTCACTGACGTT
TTGGTTGACCTACGAACAAATTCGAAAATTGTCTGGTACCGCAAGCTTTT
GAATTCAAAAAGAAGGATTCTTCTCACTTTACAAAGGATTCGTACCAACT
TGGTCTCGATGTCATATGCTCTGGTCTCGTTGCAGCCACTGTCAGTACAC
CGGCAGACGTGGTCAAAACTAGAATCATGAATAATCCTGGTCAATATAGA
GGATCACTAGATTGTGCTATGAGAACGACCTCGTGACCTATGATACGGTC
AAACATTTCTTGCTACGAAACACAAGTTTAGAAGATAACTATTTCACCCA
TACTCTTTCAAGATATCGAGGTGTTTCGCATGCGTTCCTGCTACTGGCAA
AAGAGAATGGTGTTTTAGGATTGTGGAAAGGGTGGCTACCAAATGTTCAA
AGGGCTGCACTTGTCAATTTGGGAGGAAGTCGCTGATTGGAGGAATGACA
TCAGGAGCATTGGCACAGTTTCTTGCATCACCAACAGATCTGGTTAAAGT
TCAAATGCAAATGGAAGGCAGAAAAATGTTGGTGGAAGGAAGACCTTCAA
GTGTACACTGGATGTCGAATGATGTTTTATGAATATGCAAGAGAAAATAT
CCTTGGCAAAGATCCTGATGGTTACTTCCCTTTTTGTTAAGGAGGAAGGG
CTCTCAAAATTATGGCGAGGAATTCAACCAGCAGTGATGCGACATTTGGT
AACTTATCCCTTGGATATCACCAAAACAAGACTTCAAGTGCAAGGCGAAC
ATGCATCAATAAATACTCTAGGCAAAACAAAATATCGTGGAATGGTTAAA
ACTGCAGCTGGAATAGATGGGTCGTCCTGGAGGTCACAATGGTGTAATTA
ATGATTCATTTGCAAAGAAATATGCTCTTTGTTGTCTTTCTGCAACAGTC
GCTGAATCAGGCCCCTTGGTCACTGACGTTTTGGTTGACCTACGAACAAA
TTCGAAAATTGTCTGGTACCGCAAGCTTTTGAATTCAAAAAGAAGGATTC
TTCTCACTTTACAAAGGATTCGTACCAACTTGGTCTCGATGTCATATGCT
CTGGTCTCGTTGCAGCCACTGTCAGTACACCGGCAGACGTGGTCAAAACT
AGAATCATGAATAATCCTGGTCAATATAGAGGATCACTAGATTGTGCTAT
GAGAACGACCTCGTGACCTATGATACGGTCAAACATTTCTTGCTACGAAA
CACAAGTTTAGAAGATAACTATTTCACCCATACTCTTTCAAGATATCGAG
GTGTTTCGCATGCGTTCCTGCTACTGGCAAAAGAGAATGGTGTTTTAGGA
TTGTGGAAAGGGTGGCTACCAAATGTTCAAAGGGCTGCACTTGTCAATTT
GGGAGGAAGTCGCTGATTGGAGGAATGACATCAGGAGCATTGGCACAGTT
TCTTGCATCACCAACAGATCTGGTTAAAGTTCAAATGCAAATGGAAGGCA
GAAAAATGTTGGTGGAAGGAAGACCTTCAAGTGTACACTGGATGTCGAAT
GATGTTTTATGAATATGCAAGAGAAAATATCCTTGGCAAAGATCCTGATG
GTTACTTCCCTTTTTGTTAAGGAGGAAGGGCTCTCAAAATTATGGCGAGG
AATTCAACCAGCAGTGATGCGACATTTGGTAACTTATCCCTTGGATATCA
CCAAAACAAGACTTCAAGTGCAAGGCGAACATGCATCAATAAATACTCTA
GGCAAAACAAAATATCGTGGAATGGTTAAAACTGCAGCTGGAATAGATGG
GTCGTCCTGGAGGTCACAATGGTGTAATTAATGATTCATTTGCAAAGAAA
TATGCTCTTTGTTGTCTTTCTGCAACAGTCGCTGAATCAGGCCCCTTGGT
CACTGACGTTTTGGTTGACCTACGAACAAATTCGAAAATTGTCTGGTACC
GCAAGCTTTTGAATTCAAAAAGAAGGATTCTTCTCACTTTACAAAGGATT
CGTACCAACTTGGTCTCGATGTCATATGCTCTGGTCTCGTTGCAGCCACT
GTCAGTACACCGGCAGACGTGGTCAAAACTAGAATCATGAATAATCCTGG
TCAATATAGAGGATCACTAGATTGTGCTATGAGAACGACCTCGTGACCTA
TGATACGGTCAAACATTTCTTGCTACGAAACACAAGTTTAGAAGATAACT
ATTTCACCCATACTCTTTCAAGATATCGAGGTGTTTCGCATGCGTTCCTG
CTACTGGCAAAAGAGAATGGTGTTTTAGGATTGTGGAAAGGGTGGCTACC
AAATGTTCAAAGGGCTGCACTTGTCAATTTGGGAGGAAGTCGCTGATTGG
AGGAATGACATCAGGAGCATTGGCACAGTTTCTTGCATCACCAACAGATC
TGGTTAAAGTTCAAATGCAAATGGAAGGCAGAAAAATGTTGGTGGAAGGA
AGACCTTCAAGTGTACACTGGATGTCGAATGATGTTTTATGAATATGCAA
GAGAAAATATCCTTGGCAAAGATCCTGATGGTTACTTCCCTTTTTGTTAA
GGAGGAAGGGCTCTCAAAATTATGGCGAGGAATTCAACCAGCAGTGATGC
GACATTTGGTAACTTATCCCTTGGATATCACCAAAACAAGACTTCAAGTG
CAAGGCGAACATGCATCAATAAATACTCTAGGCAAAACAAAATATCGTGG
AATGGTTAAAACTGCAGCTGGAATAGATGGGTCGTCCTGGAGGTCACAAT
GGTGTAATTAATGATTCATTTGCAAAGAAATATGCTCTTTGTTGTCTTTC
TGCAACAGTCGCTGAATCAGGCCCCTTGGTCACTGACGTTTTGGTTGACC
TACGAACAAATTCGAAAATTGTCTGGTACCGCAAGCTTTTGAATTCAAAA
AGAAGGATTCTTCTCACTTTACAAAGGATTCGTACCAACTTGGTCTCGAT
GTCATATGCTCTGGTCTCGTTGCAGCCACTGTCAGTACACCGGCAGACGT
GGTCAAAACTAGAATCATGAATAATCCTGGTCAATATAGAGGATCACTAG
ATTGTGCTATGAGAACGACCTCGTGACCTATGATACGGTCAAACATTTCT
TGCTACGAAACACAAGTTTAGAAGATAACTATTTCACCCATACTCTTTCA
AGATATCGAGGTGTTTCGCATGCGTTCCTGCTACTGGCAAAAGAGAATGG
TGTTTTAGGATTGTGGAAAGGGTGGCTACCAAATGTTCAAAGGGCTGCAC
TTGTCAATTTGGGAGGAAGTCGCTGATTGGAGGAATGACATCAGGAGCAT
TGGCACAGTTTCTTGCATCACCAACAGATCTGGTTAAAGTTCAAATGCAA
ATGGAAGGCAGAAAAATGTTGGTGGAAGGAAGACCTTCAAGTGTACACTG
GATGTCGAATGATGTTTTATGAATATGCAAGAGAAAATATCCTTGGCAAA
GATCCTGATGGTTACTTCCCTTTTTGTTAAGGAGGAAGGGCTCTCAAAAT
TATGGCGAGGAATTCAACCAGCAGTGATGCGACATTTGGTAACTTATCCC
TTGGATATCACCAAAACAAGACTTCAAGTGCAAGGCGAACATGCATCAAT
AAATACTCTAGGCAAAACAAAATATCGTGGAATGGTTAAAACTGCAGCTG
GAATAGATGGGTCGTCCTGGAGGTCACAATGGTGTAATTAATGATTCATT
TGCAAAGAAATATGCTCTTTGTTGTCTTTCTGCAACAGTCGCTGAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029945XLOC_029945Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046943-proteinTCONS_00046943-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046943-exon-scaffold_118-1575043694:419399..419614TCONS_00046943-exon-scaffold_118-1575043694:419399..419614Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:418612..418728TCONS_00046943-exon-scaffold_118-1575043694:418612..418728Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:418271..418333TCONS_00046943-exon-scaffold_118-1575043694:418271..418333Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:416394..416478TCONS_00046943-exon-scaffold_118-1575043694:416394..416478Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:414219..414344TCONS_00046943-exon-scaffold_118-1575043694:414219..414344Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:413790..413902TCONS_00046943-exon-scaffold_118-1575043694:413790..413902Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:413172..413256TCONS_00046943-exon-scaffold_118-1575043694:413172..413256Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:412496..412610TCONS_00046943-exon-scaffold_118-1575043694:412496..412610Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:412178..412237TCONS_00046943-exon-scaffold_118-1575043694:412178..412237Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:411885..411981TCONS_00046943-exon-scaffold_118-1575043694:411885..411981Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1575043694:410621..411357TCONS_00046943-exon-scaffold_118-1575043694:410621..411357Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:419399..419614TCONS_00046943-exon-scaffold_118-1510915933:419399..419614Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:418612..418728TCONS_00046943-exon-scaffold_118-1510915933:418612..418728Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:418271..418333TCONS_00046943-exon-scaffold_118-1510915933:418271..418333Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:416394..416478TCONS_00046943-exon-scaffold_118-1510915933:416394..416478Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:414219..414344TCONS_00046943-exon-scaffold_118-1510915933:414219..414344Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:413790..413902TCONS_00046943-exon-scaffold_118-1510915933:413790..413902Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:413172..413256TCONS_00046943-exon-scaffold_118-1510915933:413172..413256Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:412496..412610TCONS_00046943-exon-scaffold_118-1510915933:412496..412610Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:412178..412237TCONS_00046943-exon-scaffold_118-1510915933:412178..412237Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:411885..411981TCONS_00046943-exon-scaffold_118-1510915933:411885..411981Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1510915933:410621..411357TCONS_00046943-exon-scaffold_118-1510915933:410621..411357Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:419399..419614TCONS_00046943-exon-scaffold_118-1491911889:419399..419614Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:418612..418728TCONS_00046943-exon-scaffold_118-1491911889:418612..418728Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:418271..418333TCONS_00046943-exon-scaffold_118-1491911889:418271..418333Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:416394..416478TCONS_00046943-exon-scaffold_118-1491911889:416394..416478Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:414219..414344TCONS_00046943-exon-scaffold_118-1491911889:414219..414344Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:413790..413902TCONS_00046943-exon-scaffold_118-1491911889:413790..413902Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:413172..413256TCONS_00046943-exon-scaffold_118-1491911889:413172..413256Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:412496..412610TCONS_00046943-exon-scaffold_118-1491911889:412496..412610Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:412178..412237TCONS_00046943-exon-scaffold_118-1491911889:412178..412237Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:411885..411981TCONS_00046943-exon-scaffold_118-1491911889:411885..411981Clytia hemisphaericaexon
TCONS_00046943-exon-scaffold_118-1491911889:410621..411357TCONS_00046943-exon-scaffold_118-1491911889:410621..411357Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:410621..419614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.67652	5.29613	1.66493	1.08775	4.47854	2.56499	4.63718	6.622	5.22521	4.77415	1.73735	1.45287	4.0914	2.05874	5.06903	8.02965	8.02464	8.18169	3.11695	0.00872517	3.22592	3.4259	6.29127	6.86508	1.1795	3.23922	1.40778	2.87497	5.34022	5.49924
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002030Mit_uncoupling_UCP-like
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0031966mitochondrial membrane
Vocabulary: Biological Process
TermDefinition
GO:0006839mitochondrial transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006839 mitochondrial transport
cellular_component GO:0031966 mitochondrial membrane
Blast
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BLAST of TCONS_00046943 vs. Swiss-Prot (Human)
Match: UCP4 (Mitochondrial uncoupling protein 4 OS=Homo sapiens GN=SLC25A27 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 7.580e-127
Identity = 179/306 (58.50%), Postives = 230/306 (75.16%), Query Frame = 3 
Query:  168 AKKYALCCLSATVAESVTYPLDITKTRLQVQGEHASINTLGK-----TKYRGMVKTAAGIVKEEGLSKLWRGIQPAVMRHLVYTGCRMMFYEYARENILGKDPDGYFPFWKSLIGGMTSGALAQFLASPTDLVKVQMQMEGRKMLVEGRPSRYRGVSHAFLLLAKENGVLGLWKGWLPNVQRAALVNLGDLVTYDTVKHFLLRNTSLEDNYFTHTLSSICSGLVAATVSTPADVVKTRIMNNPGQ-------YRGSLDCAMRTIQKEGFFSLYKGFVPTWSRCAPWSLTFWLTYEQIRKLSGTASF 1049
            A K+ L   +ATVAE  T+PLD+TKTRLQ+QGE A++  LG        YRGMV+TA GI++EEG  KLW+G+ PA+ RH+VY+G RM+ YE+ RE + GK  D ++P WKS+IGGM +G + QFLA+PTDLVKVQMQMEG++ L EG+P R+RGV HAF  +  E G+ GLW GW+PN+QRAALVN+GDL TYDTVKH+L+ NT LEDN  TH LSS+CSGLVA+ + TPADV+K+RIMN P         Y+ S DC ++ +Q EGF SLYKGF+P+W R  PWS+ FWLTYE+IR++SG + F
Sbjct:   20 ASKFLLSGCAATVAELATFPLDLTKTRLQMQGE-AALARLGDGARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKSEDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRKL-EGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIREMSGVSPF 323
The following BLAST results are available for this feature:
BLAST of TCONS_00046943 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UCP47.580e-12758.50Mitochondrial uncoupling protein 4 OS=Homo sapiens... [more]
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