TCONS_00046942 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00046942
Unique Name	TCONS_00046942
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1835

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_118:410621..419587-

transcript sequence

>TCONS_00046942 ID=TCONS_00046942|Name=TCONS_00046942|organism=Clytia hemisphaerica|type=transcript|length=1835bp
cgattatttaagcgaatttttcgcttaaattcgattatttaagcgaattt
atttttgagaagatcccttagttaaaaagaaaaagttttttttaaatggg
tCGTCCTGGAGGTCACAATGGTGTAATTAATGATTCATTTGCAAAGAAAT
ATGCTCTTTGTTGTCTTTCTGCAACAGTCGCTGAATCAGTAACTTATCCC
TTGGATATCACCAAAACAAGACTTCAAGTGCAAGGCGAACATGCATCAAT
AAATACTCTAGGCAAAACAAAATATCGTGGAATGGTTAAAACTGCAGCTG
GAATAGTTAAGGAGGAAGGGCTCTCAAAATTATGGCGAGGAATTCAACCA
GCAGTGATGCGACATTTGGTGTACACTGGATGTCGAATGATGTTTTATGA
ATATGCAAGAGAAAATATCCTTGGCAAAGATCCTGATGGTTACTTCCCTT
TTTGGAAGTCGCTGATTGGAGGAATGACATCAGGAGCATTGGCACAGTTT
CTTGCATCACCAACAGATCTGGTTAAAGTTCAAATGCAAATGGAAGGCAG
AAAAATGTTGGTGGAAGGAAGACCTTCAAGATATCGAGGTGTTTCGCATG
CGTTCCTGCTACTGGCAAAAGAGAATGGTGTTTTAGGATTGTGGAAAGGG
TGGCTACCAAATGTTCAAAGGGCTGCACTTGTCAATTTGGGAGACCTCGT
GACCTATGATACGGTCAAACATTTCTTGCTACGAAACACAAGTTTAGAAG
ATAACTATTTCACCCATACTCTTTCAAGcatATGCTCTGGTCTCGTTGCA
GCCACTGTCAGTACACCGGCAGACGTGGTCAAAACTAGAATCATGAATAA
TCCTGGTCAATATAGAGGATCACTAGATTGTGCTATGAGAACGattCAAA
AAGAAGGATTCTTCTCACTTTACAAAGGATTCGTACCAACTTGGTCTCGA
TGTGCCCCTTGGTCACTGACGTTTTGGTTGACCTACGAACAAATTCGAAA
ATTGTCTGGTACCGCaagcttttgaaaaacaaaagtttaCTAAGTGAATA
ATGTCTTTTGGGTAATGGTAGTATTGTAGCACAACCTCAATTACATAGGA
GTTCTGCTGAAACGACGATGTATTGTCGATACTTGTATCATCATAAAAGA
CCTTTTCAGAAAGGTTTGGAATGTTACCGCTCTTATGAAAAAGCGATTTA
CCGGACTTGATATCAAGCATTGATAGGCAGCCTAATTATCATCGCATAAC
AGGCGTTTAACATCATAGTACATAAAAAACTCGCAAAACCCCTTAAGAAT
GGAAAGGCACAATTTAAGGCATATTTACAGAAGGAAACTTAAGCCTTTTG
ATCTTGTGACGGTGAAAAACGATGATCCTGCGACCAGAAAAGTgcttttt
tgaccaaaaagaaCAATGATAAATGCCGTCGTTAAAAAGAAGTGTGTTTC
GAAAAAGGATAGAGTATGGAAATCTAGTCTTGTCAGTAACATAACTGGAA
TGTCTTCCCGACAAAAAATACTAATACAAGCACTATTTTGAAGGTTATAT
CAAAGAGTTTTAAATATGACCCTTTGTAACTGCAaggaaaatttttaata
ttttttcagattgtttttattattgttGATTATAATTATTATGTACATGT
ATTTTGATAATGTAGGTCTATTTTTACAAttacaattttttattcaagCA
ATTTGCTTGCTGACTTCAAAGTAAGAGCTGTCATTTGAAACCTATCatgt
aaaaattaaaacttaTAACAAGATTTAGCttagtgttttcaatgaactca
tttaaatatattttttaattgaaacaGAAACTCGC

Run BLAST on NCBI

transcript from alignment at scaffold_118:410621..419587-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00046942 ID=TCONS_00046942|Name=TCONS_00046942|organism=Clytia hemisphaerica|type=transcript|length=8967bp|location=Sequence derived from alignment at scaffold_118:410621..419587- (Clytia hemisphaerica)
CGATTATTTAAGCGAATTTTTCGCTTAAATTCGATTATTTAAGCGAATTT
ATTTTTGAGAAGATCCCTTAGTTAAAAAGAAAAAGTTTTTTTTAAATGGG
TCGTCCTGGAGGTCACAATGGTGTAATTAATGATTCATTTGCAAAGAAAT
ATGCTCTTTGTTGTCTTTCTGCAACAGTCGCTGAATCAGGTAAAGTTCTA
TTATCAATTATTATAATATATATTTTTTCTTGATATACATATAAACTTAG
TAGGATTACGTCATTTAAGCTATTATAAACACCTTGACAGGCTGGAATAT
GACTTCTTTCTGTTACTAGCAATAGCCAAACAGGGGTCTTATTCCAACTT
TTCAGTGATTCTGTTAGGGAAATACACAAACGCATATCAGGTGTTTTATA
ATGCAGCATGATGAAAAGTAACCCTGAAAAGAAACTGACTCTGATTGACA
ATTATCGTCTTGAATAGTCAGAGTTACTTATTTTTTGTTTGTTTGTATTT
TATACTACAGATAAAAGTTTGTAAATCTTTTTAAACATTCAATTCCAATT
CTTTGTCAAAACCAATTAAGCATTCGAACCTTTCAGCTTCCCTTTCCTTT
CAGAATTATTTGATCAAGGAAGATTTTTCGTACATTGATCAAAATTCTTT
CATACACCACCCCTTTAACTCATTTCTTTTATCTTTAGCTCGCATAATTT
ATGTTTATAATATTTTATTGATAAACCTGCCTTCTACCTTTGAAAATTTA
CTTTTATTACAATATACAAACTATTTTTATATGTAGGTGGATTGATTCCT
TTTCAATGAAAAGTTAAGTTTTTTGTGAAAATACTATTTCTTTATCATAT
TCATCGTAGTAACTTATCCCTTGGATATCACCAAAACAAGACTTCAAGTG
CAAGGCGAACATGCATCAATAAATACTCTAGGCAAAACAAAATATCGTGG
AATGGTTAAAACTGCAGCTGGAATAGGTAAATTAACTGTTCATTTTTCGT
CATCCTTTTACTTTACTTAAAAAGTGCCATCCCTCATTCTTGTGATTATA
TCCGTAGGCTTAATAATGGGCTAACAGTGCTCTAACCTAGATTGTTTTGA
TGTCCGCCAGGGAATTCCCTCAATTGCTGTATACTTTAATCGTGGTAAGT
TTTCATTTGTGGTTAGCCTACAAAGGCTTATAACAGGTACATATAGTGCT
GGTCGACAAAGATAAACATTTGCTTATTCAAGTATAAACATGTTTTTTTT
CTAGTTAAGGAGGAAGGGCTCTCAAAATTATGGCGAGGAATTCAACCAGC
AGTGATGCGACATTTGGGTAAGAGAAAATATATTTGGAAGTTTTTTTCTA
TGTAATTTTATCTTACTAGCAACATTTGTACCAAATTTTACCACCATACA
CCCACTAAATCAGGTTTTATTAGTCTTTTGTTGAGGCATCTCATGTCATG
TCAAGGCCTAGCTAAAACCCTGTAAAATCTCATGGCATAACCCTTGATGT
AGTTATCCAACTAACTTCAAATTGGCAGGTTTTATGTATCAATAATATGT
TTCAGAAAATTCTAAAAAAGCTCCGAAAATTAATGACGTCATCAATGTTA
AGTCATTACTTTTTGAAAATGCTTACTCCACCAGCATGAATTTTAAAATT
CAATCTCATTGTTATATTAGAAATTGACAAATATGTTATAGATATTCTTT
TTGGCTTTTAGAAAATCAAAACAGAATTAAAGAATTTTTATTTGTTAAAC
TTTAAAGGAACATAACAGTACTTGCGAAATTTGTAAACAAACTCTATGCA
GCGGATACAAAATCAAAACAAATGTCACATGTCAAAATCAAAAATCAAAC
CAAATATGGCTAATTTTGATTGTTCAATTGTTTTACAAGTTTGTTTTGGA
CACGTGATTTTAATTGTTCTCTTTAATGACACGTGGTTCGCGCAATGTTT
ACATTTTACTACTTTAATGTTCCTTTAATTGCGATTTTAGTAGAGAATAC
TTTTTTACTGGTTAGCGGTAAATAGGAATCTTTGAGACGACGTTGCTACC
TTTATGATGACGTCATCAACCCAAACTTTGTTCTTTGAATTCATTTCATG
CTAGAAAACATTTCTGCTAAGTTTCAATTCCTTATACCGGGTGCGCCACA
AAAAAGTTTCTCTCTTTGAAAGTAATTTTTCTCGAAATCTAAAAATTTTA
AAAGAACCATTTCTGTTTCGTTGGAAAGAAGAAAGATAAACTTAAATTTT
GATGGGTCCTTTATTAAATTCGATTCGTTAGATTAAAAGTTATGCTCAAT
TAAATAAAAAAGTTACTTTCAGAAAGTGCTCGAAAACGTTAAAAATCGAC
CTATCAAATTTTTATTTTAAATTTGGCAATCGCAATAGCCTTTACATGAT
TAAAAGCATTTTTCAGTAACTAAACACATAAATTTTTAAAATGAAGGGTC
GAAAGGGTTTAAAATCTTCATCAAAATCAATTTAATTTACTTTTACCGAA
ATTTTCCTCTGGTTTTTGGTGCTAGACTGGATAAAGTCTATGTAAGACTG
GATCTACCTCGAAACCCATATTTGATGTATTTTAATGAATTTTATCAGAT
TTTTTGGCCTTTTTCGACGATTTTTCTTCTTTTCATTGAAATTTCAATCT
TCCTTTATATAACAAAAGGTCATTTAGACAGCTAATTATCATTTTTAATG
ACTGAAACAAAAATACTGATGTATCATGTAATTATGCTTCTGTTTAATTT
GATAGGTCGATTTTTAACGTTTTTGAGCACTTTCTGAAAGTAACTTTTTT
ATTTAATTGAGTATAACTTTTGATCTAATGAATCGAATTTGATAAATGAC
CCATCAAAATTTAAGTTTATCTTTCTTCTTTCCAATGAAAGAGGAATGGT
TCTTTTAAAATTCTTAGCTTTCAGAAAAATTAGTTTCAAAGAGAGAAACT
TTTTTGTGGCGCACCCGGTAGCACTTCTGGATCAAAAGTTATGCAAGGAT
GGTAGAAAACACCCCCGCTTAATAATAGGAACCCCAGAAAAGCTTGATTA
ATAGGGTTAATGGTTTAACAGGGAAATACATTTTCTTTTCTCATTCTTTT
CTTTCTTAGTGTACACTGGATGTCGAATGATGTTTTATGAATATGCAAGA
GAAAATATCCTTGGCAAAGATCCTGATGGTTACTTCCCTTTTTGGTAAAC
ATATTTTACTTAATATCAGCAAAAAAATTATAATTTACAGAAACTGTTTT
CAAAACAGCTGCAATGACAGATTCAATATATTCCTCGTTGAACATTATGA
TAAACCTACACAATATTCAATTAGCCCCCGTCTCAGAAAAGGACTGGGCC
CGAATTTGCGGACGTTTTCACAGTTTCACTTTCGTTTTCGGCTATGCGAC
AGCGTTTTCAGGCAGAAAGCAGAGGAAATCTGTGAAATTATGGTAGGGAA
TGCTATCCTATTTTCCCAGTGTTTCTCAAAATTGGAGCGAGATTATTGTT
CTAGAAAGTTTATAAAGGCCTAATAGTTCCAGATTAGTATGATTTCATCA
GAAAAAACATTTACACCAAAGCTCCCTTATTGATATGTGAAGGCTACCAA
AGATGGCAATTTCCTCCATCAGAACAACTTTAACATAGGAACCAAGGACA
GTCAAGAAGTCTACTTTGTTGAAAATTTGCACAAAATACTTAGAGAAAAT
GGTACTATGGAAGCCCATTCTATCCTCCTAAATGATAGTTGAAAGATCAG
CAGTTAAGAGGGTTGATTAAAATAGAAATCAAAGCACACAATAAAGTATA
CATATATATTTGTCCAGAAAGAACTGGCATGTTGTTTGCTTTGTTTTGGT
TTTTAAAAATATGTACTTATCAGCCCTAAAAAAATACAAATTTGAATATA
ATGAGGGCAATGAGTCTGGTTAAATGTTACTATATTAACAAGAAAAGGAT
TACTGAAAAAATACTACTTTAGATGAACTAAACTCAAAAACTAAAACTCT
ACCATAAATTTACATTACGACAATTTAAAAATCTATCTTTAATAGCAACA
AAGAAAATAATATGGCTCAAAGTTTTAAAAACAGAGCTAGTCAGAGCTTC
AATTCAGTAGGTAGAGAGCTCTCAAAATTTGAAAACAGACACTGCATTGG
TTAGAGAGAAAGATGTCAACCATCCACACATTTTTTTCGATTCGTGAAAA
AAATAAAGTATAAAGGTTCTCTTTTTTTTGGTAATCAATTCCAACAAACA
ACAATCAATATAACAGTTTTTTTGAAAACCGTCCCACAGTGTTAACATTA
TCAACCAACAAAACCCACATCGCCAAAATTGTAAAAATAAGTCAATATAG
TTTCTATCAGCAATTCCTCGTAAAATGTTTTTTTTCCAACATTCTGATAA
CAATCATGGCTGGAGGCATCATGTGTAGAGTGACTGTGTGGCATTTCATT
GCTTTTAATGGTCATGATACCAAACATCAACCAAACAAAACTATGACGCC
AAGCCAAATCTGTCGATTAAAAATTTCCATGAGAATTATAATCAAAAGCT
ATCTCGTGAAATGCTTTTTTTAACATTCTGGATGTGTTCAATACATGAAA
AGTCATTTGCTATCCCATTTGCCATGAGATATACGAGTCAACAAAACAAC
AAATCATGACAATTGTCAGTCGGGTCTGCTACTAACATGTAATAGTTTTA
TTATAGCCGAGCTTGAGAATCCGTATGCAGAACTTGTAACTTGTATTATG
TGTATAATTATGTCAGTCGACTTGAATCATGATACATTACTGACATTTCA
CTGGATGCATTTTCGCTGTGAAATTATCCGCAAAATTCGCTGACCGCGTT
CCGAGACGGAGGCTACTTGATGAATACAGTATTAAAGGAAACTTATTTTA
GCGGATTTGGCGAATTTAGACGAAATTCGCCAAAATTAGTTCCCGCCAAA
ATTAAATATTTTGCTCACTCGCCAAAATAAGTTCCCGGCAATATTAATTT
TTTTGTTTCCTTGCTTATTAAAATAACCTCTGAAATTCATCAAAATTGCT
CAAAATAAGGCAAAAAAGAACAGATTTACGCTGTCATTCGCCAAAATTAG
TTCCCGCCAAAATTAGAAAAATTCACTATTCGCCAAAATAAGTTCCAGCC
AAATTTAAATTTTTTTTGGATATTTGCTGCCCGCTAAAATTAGTTCCCGC
CAAAAAAAGTTCCCTTAAGGTAATCAATCTTTATTTGCAACAGGAAGTCG
CTGATTGGAGGAATGACATCAGGAGCATTGGCACAGTTTCTTGCATCACC
AACAGATCTGGTTAAAGTTCAAATGCAAATGGAAGGCAGAAAAATGTTGG
TGGAAGGAAGACCTTCAAGGTTTTTACATTTAATATTATGTTCATTTACA
TGTTTTTTCTTTTATAAGCGAAACGTCTTATATAGCGGCAGACACAATTG
CTTATAAAAAACATGTATCGAAGAAGACAATTCAGTTTCGAAAATCTTTC
AAGCAAAATATTATCATTTGAAAAAACTTTTCTTTTGTGCTCATGTTTTT
CATTGGGCTTCTTGAAATTATCATTCTATTTAAATGTCTGAATCCCTCAC
AAACCTCAAGCGTGTCCCTTGCTTATCAAACATTCCAAATTAAGAGGTTA
AAATTAGCATCATAAATCTTGTCTTATCTCTGCAGATATCGAGGTGTTTC
GCATGCGTTCCTGCTACTGGCAAAAGAGAATGGTGTTTTAGGATTGTGGA
AAGGGTGGCTACCAAATGTTCAAAGGGCTGCACTTGTCAATTTGGGAGGT
AGGATTTATTACTGTTTTGATAATGTTATTATTACTATATCAAGATGTTC
CGCTTAAGTTTAAAAATATGTTTTTCCCTCTAAAATTCAGGCCAAATTTG
TTGCTAACCCCCTTCAAAGCCAAAAAGATTTCAAAATTAGCCAATATACC
AAGTCCCAGACTTAAGGCTATAACTCCTGACCACTTGATTTAAAAGAGCT
TAAACAGAATGCTTTTAGAAAAAGTGTAGAAATATCTTTCTAATGGTACC
AAAATAATTGTCTCTCAAGCTTTTATGCTAGTTTGAAGTTTTGAATTTAA
AAAATAAAATGAAAATTTTCATATTATCAAAAAATGTTGCGCGCTGTAAA
GGTTAAAAGCCCGTTAAGAGTCCATATTTCCTCAGAGATGAGAAGCGTTG
CTTGAAAAGTGTTGTTTTTGTATATTGTCAATTTATCATCAAATATTAAG
TGCCATTACACGAAATTATATTTTGTGCCTTGCCCTGGTGGAAGATTATG
TATTGGTAGTTTCTTTTTTACTTATTTTCAGACCTCGTGACCTATGATAC
GGTCAAACATTTCTTGCTACGAAACACAAGTTTAGAAGATAACTATTTCA
CCCATACTCTTTCAAGGTAAGTTTTTCAGACCCCTCCTTATCTTTATCAT
GTTCTATAATTTGGAAGAATGTGGATTAAATGTTTTAGAAATTAAATGTT
TAAATGATTAAATGTTTCCAAATCAGGAGCAATTCGATGCTAAGTTTCTT
GTCGTTTTAATTTTGAAAAGATCTTTATTGAAACAAAAGAATGTCAATAT
TATGCCGATACAATGATATCGTGACACAAAACAATTTATGCTCCTTTAAA
TAGTTCCATTTAAAGTAGTAAGTGAGTAAGTTTGTGCCCGCAGTCGGAGG
CGACCCGTAGGCTCCTCTTTCGATAGCTATCTACCCGAAGGTAGGTGAGG
GCGCCACTCTTTCTCCCTGGATTGCTCCTCTAACCCTTGATCCGTCTCTC
AATTGCTGAACATCAAGCATAGAGGCATCAAGTACCATTTTCAGAATGTT
TGGTATGACCCGCCTAGGGGTAGACCCGACAACCTTGCGTACCGTAGCCG
GATACTCTACCACTACGCTACGGTCCATTTAAATTATTGGCTATTTTTTT
TGAAAGGTCGCTTTTTCTCATTTTCAGCATATGCTCTGGTCTCGTTGCAG
CCACTGTCAGTACACCGGCAGACGTGGTCAAAACTAGAATCATGAATAAT
CCTGGTCAATATAGAGGATCACTAGATTGTGCTATGAGAACGGTATCATA
TTTTTTCGTTGAAAATTTACTTTGTAATACTATGAAAAAGGGTTTACAGA
AGTTATTTTTTAGAATGATTTATTCCTGTCAAATGAATTGCCATCTTGAT
TATTATATTAGTATTCTCGTTTCTGTGTCCTGTGCTCAAAATGATGAACA
TTATTATTAGGTTATACTTTTATTATGTGGGCTAATGCATATTATTCAGA
CAAAACTTGTCAGGCAAAAATTAAATAAAATCTTTTATTTATTATTTTAG
ATTCAAAAAGAAGGATTCTTCTCACTTTACAAAGGATTCGTACCAACTTG
GTCTCGATGTGTAAGACTAATTGTCTTTCCTAACTTTCGAATCTAAGAAG
TAACCCATGAACTTATTCGGCTGTTTCTTTTTCTATTTGTTTTTCTTTTA
CTCAATCGGTGACTTTGATGAATGTCGGTAGTGAAAATGTAAGCGTTTTC
CCATCGCACTGTTTGAAATCATCATCTCCATACACTTTTTTTATTTTTAT
GTATAGGCCCCTTGGTCACTGACGTTTTGGTTGACCTACGAACAAATTCG
AAAATTGTCTGGTACCGCAAGCTTTTGAAAAACAAAAGTTTACTAAGTGA
ATAGTAAGTCATTTCTTCATTGTTGACTCGAAATCTTACGATTTTGAAGA
GTAGGACGGGTTTTTCTGGACAAAATTGTTGAATTGTCGATAATTGACTG
TATGATAATTCACGTTGAGAAACTGGGGAGTCTACCAAGTGCGAAGCTTA
TGTTGAATACCAAATAGCTTGCTCAAAATGGGAAATTATAGTTAGCTTTT
GTGAAAGTATATATCGCTTCCGAATCATATAGTTTGAGGTTCTCAAAACT
CAGATAATAGAGCAATGTGACTGGTATCCTTCCAGCCTGCAAAAGAACTT
AAATAAAGATAAATTTTTGCAGTACTTTTGTGTCTCAATGAGGAAGAAAT
GCGCGTCTATTATGTAATACGCTGATTAACCAGCCCAACTCTTCAGGTTA
ACAGTTGTCTCTTGAAATAATTATTGTAAATATTTGTACCAAAATTATTC
TTCGTTGTTATCACCAGCGTTTGAATGTTTAGATGTCTTTTGGGTAATGG
TAGTATTGTAGCACAACCTCAATTACATAGGAGTTCTGCTGAAACGACGA
TGTATTGTCGATACTTGTATCATCATAAAAGACCTTTTCAGAAAGGTTTG
GAATGTTACCGCTCTTATGAAAAAGCGATTTACCGGACTTGATATCAAGC
ATTGATAGGCAGCCTAATTATCATCGCATAACAGGCGTTTAACATCATAG
TACATAAAAAACTCGCAAAACCCCTTAAGAATGGAAAGGCACAATTTAAG
GCATATTTACAGAAGGAAACTTAAGCCTTTTGATCTTGTGACGGTGAAAA
ACGATGATCCTGCGACCAGAAAAGTGCTTTTTTGACCAAAAAGAACAATG
ATAAATGCCGTCGTTAAAAAGAAGTGTGTTTCGAAAAAGGATAGAGTATG
GAAATCTAGTCTTGTCAGTAACATAACTGGAATGTCTTCCCGACAAAAAA
TACTAATACAAGCACTATTTTGAAGGTTATATCAAAGAGTTTTAAATATG
ACCCTTTGTAACTGCAAGGAAAATTTTTAATATTTTTTCAGATTGTTTTT
ATTATTGTTGATTATAATTATTATGTACATGTATTTTGATAATGTAGGTC
TATTTTTACAATTACAATTTTTTATTCAAGCAATTTGCTTGCTGACTTCA
AAGTAAGAGCTGTCATTTGAAACCTATCATGTAAAAATTAAAACTTATAA
CAAGATTTAGCTTAGTGTTTTCAATGAACTCATTTAAATATATTTTTTAA
TTGAAACAGAAACTCGC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_029945	XLOC_029945	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_118	supercontig	scaffold_118:410621..419587 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.28587	1.35454	0.76405	1.82262	0	0	1.83012	1.75637	0	2.7149	5.8553e-05	7.7369e-09	0	0.0051891	0	0.000277661	9.86527e-09	0.124825	0.956615	4.95689e-06	4.69465	0.67075	0.0513461	1.49945e-07	0	1.57457e-06

Blast

[Close]

BLAST of TCONS_00046942 vs. Swiss-Prot (Human)
Match: UCP4 (Mitochondrial uncoupling protein 4 OS=Homo sapiens GN=SLC25A27 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 9.351e-127
Identity = 179/306 (58.50%), Postives = 230/306 (75.16%), Query Frame = 3

Query:  141 AKKYALCCLSATVAESVTYPLDITKTRLQVQGEHASINTLGK-----TKYRGMVKTAAGIVKEEGLSKLWRGIQPAVMRHLVYTGCRMMFYEYARENILGKDPDGYFPFWKSLIGGMTSGALAQFLASPTDLVKVQMQMEGRKMLVEGRPSRYRGVSHAFLLLAKENGVLGLWKGWLPNVQRAALVNLGDLVTYDTVKHFLLRNTSLEDNYFTHTLSSICSGLVAATVSTPADVVKTRIMNNPGQ-------YRGSLDCAMRTIQKEGFFSLYKGFVPTWSRCAPWSLTFWLTYEQIRKLSGTASF 1022
            A K+ L   +ATVAE  T+PLD+TKTRLQ+QGE A++  LG        YRGMV+TA GI++EEG  KLW+G+ PA+ RH+VY+G RM+ YE+ RE + GK  D ++P WKS+IGGM +G + QFLA+PTDLVKVQMQMEG++ L EG+P R+RGV HAF  +  E G+ GLW GW+PN+QRAALVN+GDL TYDTVKH+L+ NT LEDN  TH LSS+CSGLVA+ + TPADV+K+RIMN P         Y+ S DC ++ +Q EGF SLYKGF+P+W R  PWS+ FWLTYE+IR++SG + F
Sbjct:   20 ASKFLLSGCAATVAELATFPLDLTKTRLQMQGE-AALARLGDGARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKSEDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRKL-EGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIREMSGVSPF 323

The following BLAST results are available for this feature:

BLAST of TCONS_00046942 vs. Swiss-Prot (Human)

BLAST of TCONS_00046942 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UCP4	9.351e-127	58.50	Mitochondrial uncoupling protein 4 OS=Homo sapiens...	[more]

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TCONS_00046942 (transcript) - C. hemisphaerica