TCONS_00046805 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046805
Unique NameTCONS_00046805
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1957

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046805 ID=TCONS_00046805|Name=TCONS_00046805|organism=Clytia hemisphaerica|type=transcript|length=1957bp
ttagtatTGGGCCTTTTAAAAAGACTGAATATAACCCTGGTTGGTTGAAT
TTGgtttaattgattaaaatggCTGATGCGCAATTTTGGAAAGAAGGGTT
TTTACACAAAGCTGGTAAACACAGTTTTCAGggCTGGCGAAAAAgatggt
ttgttttgaattctgATGCTTTGAAGTATTACAATCCTGGTCATGAGTAT
AACGAATCAACTCTTCTTGGTGTCATCCAGTTAATTGATATTCAGTCGTT
TGTAGTGTTGAAATCACCAAAATATGCTTTTGAAATTGTCACAAAGTCAA
GAACATACAGCATGTCAGCAAAATCGGAAATGGAAAGAGATGATTGGATG
ATCACTTTAAGAAAAGCATCTGACGAGAAAAGagGGATGACAACACAAAG
ACAAAGTACTGTTAGTTCTGTTTCAACTGGCTCAACAAACTCAAAAGCTG
CAGAAGataacaATGTTTTCACGGAGAAGCCGAAAAAGAAATCgtccaaa
aagtcaaaatccaAAAGTTTGAAATCTACTTCACCGGAAGAAAATGTATA
CGCTTCGATACCGGAAGCGAATGATACTAACGGTAGCGAAAAACAACGGG
CAAGCACAATCGCAGAAGAAAGTTTATCTTCTTCCACAAAGGAAAAAGTG
GAACTTAAAAAACGGTCTAGCTCTGTTGCGGACACCCTGACACGGGCCAA
TTCCGCATTACGGAAAATGTCTACAGCAACGGAAGATGATACCGCGGTAG
AGAGTATTTATCAAGAACTCGATCAAGAGCTTGACAATGAAGTAGATAGT
GACGAAAGTGACATTGAGGGCGTTGATGGGGCGCCAACGCCATGCACCAC
ACCTGATCTCCCGCTACCAGTTGGCGGAAATCAAAAATACGCATTTACGG
AAATGAAAGAGTTATTTACTGACGAACAGATTAATGAAATGATGGACATT
GATTTGAAGaagctttcaaaacaaaataaattgagttttgatgagAAAGA
AGAATTCCCAGCTTTCGCGCTGCTGAAAAGTTACGCTGCTAGTTTGAATA
AATAATGCGAGAGGGAGGCTCTTcgttgtttttagttttcatctAGTAAA
TATCATAGCTCGCATCACCCTTCGCCCTGTATAAAAGGGGGCGGGGATAG
AAATGTGCTGAAAATCAGAGTTTTCCAGAAAAAGTGAAGTTTAAATAAAT
TAGTGAGGTTCattcaacaggggggggggcggTTTTCTGCTTGAAGAAAT
CCCACAAATGTTGACTTCCAAATGGAAAGGTTCCAGGATCAACAGGAATA
CCTCGATGCTGCCACGGTGGTAACGCGCCCACAAAGAATTGAACCTaatc
tttctaattttctaatTGTGAAGTTTTGACatcattttgaaattctaaaa
attttcttgcttAAGAAAGCGAGGCGTTGATCTTGAGGAAGTGACCTACA
TTTTAATTAAGAGTTGCATCCTAAACAATTATGTCATGTTATGGCGAATT
TCAGGGATAAATTTCAAATTGCCTAAACTTTGAGAAGGGCCCGTGGCGTT
TTAGAACGCCATGGAAGGGTCATATATTTTTGTACTTAgatttataatat
tttgtaaCACcagataatttatttttttgcactCATACTATACTtagcat
tttttttatttcagcaaAACTTGTTATAGAGAAACGTTGACTTGTTCCCG
GTTCTATAATTCGATGTTTAAATCTTTCTTGTCGGCTTGGGCGACCATCA
GCGCTTTCGGAGGGTGTATTTCGACCAAATTCAGGGACCCTCTTATGAAG
AAAAGCTTAATAGGTTTCCGGGCTAATCTGTATCAATATAATTTTTGGCG
CAGACAAAataggctgtaacttttgatagacttCTAATTAGATAGCGATT
TTGTgcttattgaaaagatattcgaGAGTGAACATTATAAAAGATATCCA
ATAAAAT
Run BLAST on NCBI

protein sequence of TCONS_00046805-protein

>TCONS_00046805-protein ID=TCONS_00046805-protein|Name=TCONS_00046805-protein|organism=Clytia hemisphaerica|type=polypeptide|length=328bp
MADAQFWKEGFLHKAGKHSFQGWRKRWFVLNSDALKYYNPGHEYNESTLL
GVIQLIDIQSFVVLKSPKYAFEIVTKSRTYSMSAKSEMERDDWMITLRKA
SDEKRGMTTQRQSTVSSVSTGSTNSKAAEDNNVFTEKPKKKSSKKSKSKS
LKSTSPEENVYASIPEANDTNGSEKQRASTIAEESLSSSTKEKVELKKRS
SSVADTLTRANSALRKMSTATEDDTAVESIYQELDQELDNEVDSDESDIE
GVDGAPTPCTTPDLPLPVGGNQKYAFTEMKELFTDEQINEMMDIDLKKLS
KQNKLSFDEKEEFPAFALLKSYAASLNK
Run BLAST on NCBI

transcript from alignment at scaffold_117:388527..395069-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046805 ID=TCONS_00046805|Name=TCONS_00046805|organism=Clytia hemisphaerica|type=transcript|length=6543bp|location=Sequence derived from alignment at scaffold_117:388527..395069- (Clytia hemisphaerica)
TTAGTATTGGGCCTTTTAAAAAGACTGAATATAACCCTGGTTGGTTGAAT
TTGGTTTAATTGATTAAAATGGCTGATGCGCAATTTTGGAAAGAAGGGTT
TTTACACAAAGCTGGTAAACACAGTTTTCAGGTAAGCTCAACTCAACTGA
TTTTTCATAATTATCCTGATTTTAATTAGGGGTTTTATAAAACTAATTAC
TATTTAAAAAACTCTTTAGGACAACAAACCTTTGACTCCTACGACAGAGG
ACGAAAAGATTTGTAAAGGCAGGCTATTTAATGCAGTACAGTCTATTAAC
TGGAACCTCTATACCTCTAATATCTTCTTAAAACTCGAAACAAGTTTTCT
AGTCCCTTCCTTAAAGGTAACAATGCCATAAAAACCTTATATTTTTTTTA
TTGTTCAATTTATTTAATCTTGGTCTTGCATAGTAATAATAAAACTCGAC
TTAGTACTCTGTAACTCGAGTTCCCCATGCGTGTTCGAGCTACGGAGAAC
TTCACTGTACTAACAATAATAACAAACTTTTCTTGGAGGATAAGCAATTG
TGAATTTTATTTATTACAGTAGATAAAGAGGATATTTTTGAAAACTTTAA
AAAACTTTTTTATAAAAAACCTTGAATGAGGCTTACAGTGCTGAAAAGTT
CTAGAAGTACCTGCCTGTGATGGCCCCCAGCAGTTTGCGTGAATGCGTGA
ATGGGCTTTTTGGGGTTCCTCTGTGATTCTTTCAAAGTTTAGTATTTATT
ATTGGATTATTCAAGCATTTTTAAGAAACATAACATAAATAAGCCTCCTT
GTCCTTAAAATGACATAAAAATATTTTTTTTATAGGGCTGGCGAAAAAGA
TGGTTTGTTTTGAATTCTGATGCTTTGAAGTATTACAATCCTGGTCATGA
GTATAACGTAGGTCACGTGATAAAAATCATATTTTTAGTTCTGTAACATA
TCATTTATAAGGCCTTTTTTCAAAAAATTTAAATTTTGTCCTATCCCCAC
CAATAGATGTGACCACCTTAATCAACACAACTTTCCACATTTTTTAGCCT
GGATTTTTTTTATTCCTGACTTAGAGATTTTTCATGTTTTGTTAATTTAC
GTAATTTCCACTATGGAAGCAAACGTTCGATTTGCGCAAGAATCGCCATA
TCCACAGATTCGAACGTTTGCTTTCATAATGGCAGAAATTAGGTAAATTA
ACAAAAACATGAAAAACCTAACCTGATTTATTTGTCAATTACAGGAATCA
ACTCTTCTTGGTGTCATCCAGTTAATTGATGTGAGTATTATAATCAATCT
TCTCAACTGTTTAACTATTCATTCATCTATTGTAAAATTAGACGTTTTAC
TAGAACTTTTTGTCCGATAGAATCAGGTTTTTACCTTGAGAAAATTTAAA
TATATGTTTTAAATTTGGTTAAGAGTTTCTTATGGCTCCTAGTACCACCA
AAAAAAAACCTAAAATAGATACAATGACTAGATCTAGACCTACCGATACA
GGACCGGTTTAATAATCCAAGAAAAATATGAATCTTATTTATTGACTTTT
GTTTCAGATTCAGTCGTTTGTAGTGTTGAAATCACCAAAATATGCTTTTG
AAATTGTCACAAAGTCAAGAACATACAGCATGGTAAGATTTTTAATTTCC
GAATGAAGATTTTAATTCATTTTGCTGGTTTTTCAAACTTTTTGCTGTTT
GGTATAAGACTATGTATAAAGGTCTGGAGGCACTTGAAACATTTTCATCA
AATAGAAACATTTAAAAACTGAAACACGCCCCACCTATAAAAATCCGTTT
CCGAAACAAAAAATGTTTCAAACAACCATCAACAGTTTCTGTCTAGACCC
CCCCCAGGTGCTCTATACAATCCTCTATTTGCATGAACCTAGGCTTGGTT
TTCACAAACAAACGATCCTGGTAGTTCTGTATGGTAACAAATTAAGACAA
TATTTCATATAGCTCTGTGTGTTTATTTATTTTTGAAATCAAATAGGACA
ATATTTCATACCAATATCCTTGTTACTTTTTTTAACAGTCAGCAAAATCG
GAAATGGAAAGAGATGATTGGATGATCACTTTAAGAAAAGCATCTGACGA
GAAAAGGTACATCCAGTGAAGGATGACTTTTATCTAACTACGATACGAGT
TTTCTTAAGTTAGAACAAACAGATATTTTTTTTTGCAATCCATGAAATCT
TCTATTTTCATCGTTTTTTAGTTATTTGTCAAAGTGAAAGCACGCAACAC
TCTATTCTGAAGTAGATGACGTTTTTTATTCGATTTGAAAGAAAGTTTTG
TTCATTTTCCTGGAAAATTCAATTTCAAGGTTATGGCCCTTTTCAAAAAT
TTCCATCTCTTTCCCGATCTGTGAAGTTAAAACCCCCGCAAAAGATAAAG
AAACCTCATCCGCGAAATCGAATTCCCGCTAAAATTTATCCAACTAATGT
ATATTATGAGAACATAAGGCTACGATGGCCAAAATATCAAGAACAAGTTA
AAAGTGTTTTTTTCCGATACCTGTCTCCAAATAGACGATATCGGCTTAAC
ATGAAAACTCAAATTTGACCCCCCCCCCGAGAATTCCCCACAATGCTTTG
CGCGTAAAAAATGTCACCGTGAACTTTTTTCCGTGCAAAGCATTGTGGGC
AATTCTCGGGGGTCAAATCTGAGTTTTCATGTTAAGCCGATATCGTCTAT
TGGTACGGACTGGAATTTGAATCTTTCCAATATTAATATACTCATGATAT
TCATGACGTAATGTTTTATACGGATGAAGTAACCAAAAACGACCGGATGT
TTGCCACAAAACAATAAAACTATTGGCGTACGCACGGGAGATTTTGGGTG
CTTCCGCATAAAACATAATAACCGTTATAAATATCATCAATTAAAAATAA
ACTCTAGAACCTTTTTTTTATTTTTCTAGAGGGATGACAACACAAAGACA
AAGTACTGTTAGTTCTGTTTCAACTGGCTCAACAAACTCAAAAGCTGCAG
AAGGTACTATACGTAAAAGATGTTATATTGATTTAAAAGCTTTTTAGTGT
TACTTCGACCTAGATACCAATGATTTTTCTTTGTTTTACCAATAAGTGGC
TTCTGTCTTTTTTCCTACAAAAAAAATCACCTGGGGGTCATGCAGTAACT
ATGTGCACACTATGACACTTATTACGTGGTGGTGTGACAACTGAAAATCT
TAAAAGCAGTTAATAGTCCACTGTTGTAGCACTCTCAGTATACTCTCAGG
AAGATTTCGATTTCAGACAAATTGTTTTCAACCGCATAGAACATGTTATT
GACAGGTTTTACATAGATGCAGAATTCTGCTCTTTTTCTGAAACAAAGAT
AATCAAAGATTTAGAACAAAACGACATTGCGTTCAAAAATAATATCACGA
ACTTGAGCCAAACCCAATCAAAATATAATACATAAGTGGAAAAATTACTC
AGGAACAAGTGACGACATTTTTCGGCAACGCAAGTGACGGAGTTTTCCCC
GGCTAGAGACTTTTCTAGTGAACTCCAAAAGAGAGATGTGTGTAAAAGAC
CAAAAAAAGCATAGCAATATTCCAGAATTTTTTTCCAGAATTTTCTCAGT
TCAATACACATCTATGGTTCAACGTATTTAAAAGGGTAGACTAGAGTTTA
CTCTTGGTTTAACTTTGCTTTTTGATAATTTTTGACGGTGATGAAGTTTT
CCAGTGATGAAAACTAGATGAAATCTTAGAATTTTTCACTTTCGTCAATC
AAAGATATACAAACAACAAAACAATAAAATATATTCTCAACCCCAACAAA
GTTTATGAAATTATAATAAAAACATAACAAATAACTCAAAAATATGTCAA
TTGGTCATGTTTTTCTGTTTTTTTTTCTCCAANTCAAAGATATACAAACA
ACAGAACAATAAAATATATTCTCAACCCCAACAAAGTTTATGAAATTATA
ATAAAAACATAACAAATAACTCAAAAATATGTCAATTGGTCATGTTTTTC
TGTTTTTTTTTCTCCAAAAAGGGGCTGAATCTAATGGATTTGATGTGTGC
TCAAGCAATACCAAAAAATAAAGTCAACCATATTACACCTGGCAACTTTT
ATCAGCGCACTTCAATCTATCAAAAAACAATACTTGACCCTCGGGCTGAT
AAAAAACTGACTCGATCAATAACACTGATCCACTTCGTTCTAAACAATAT
AATTTGAAACAAAAACTAAAGAATGATCTGAAAATGATAAATATAATACC
TTTTCGTTTCAATTTCTTTACAAAATACATTACGATCCAACAAATTTAAA
CCCTCTATTATATTTAGTTATACTGCTTCTAATGTGACACAAATAAGCAT
CATATATGAAATTAGACACTACTTTCATTTTTGTTCTGAACTGCGTCTAC
ATGTGCATACCAACAAACATTTCATGAAATTTCATGCAAGTTAAATAAAA
GAAAAAAATGTTAATCTTTGTAGCTTGATTTTTGTGAGGTTTTATAATAA
TTTGAATGTCAATCTATAGGAGTGTAATGTAATGTTTATGGTATACTCAC
GTATTGCTTAAATATAATAGAAGGTTTAAATTTGTTGGATCGGGATGTCT
TTTCTTAAGAAATTGAAACGAAAAGGTATTAAATTTATATTTAAACATAT
GTCACTGCTGAGCCCTTTTCAGAAGATTTGACCTCTTGGAAAGTTAGTCT
TAAAGAAGCTCCTGTGGCCCCAGTTTCGCTTCAAATACCTTCAAATTGTA
CACCAATCGACGCAAAAGTTTCTGTGTCAAAAGTTATAACTCTTTGAAGT
ACTGCCGGTATTACGAGTATACTCATAGTCGGCAGTGAATGTGTTAAGAA
AGCTCTTTTCATAATTTATATCAGTGAGACATGGATAGTGAGACATCTGA
TGAAAACTAAATACTTTAATGCTTTGATTCATTCGGGTATTAAAATCAAC
ACAACATTCTTTTTGCCCGGAGCGAAGATTTTTCAGACTTCCCAAACTAG
AATCATTTGACCAAGTGCATACGTTTTTGATTTTTTTTTCAGATAACAAT
GTTTTCACGGAGAAGCCGAAAAAGAAATCGTCCAAAAAGTCAAAATCCAA
AAGTTTGAAATCTACTTCACCGGAAGAAAATGTATACGCTTCGATACCGG
AAGCGAATGATACTAACGGTAGCGAAAAACAACGGGCAAGCACAATCGCA
GAAGAAAGTTTATCTTCTTCCACAAAGGAAAAAGTGGAACTTAAAAAACG
GTCTAGCTCTGTTGCGGACACCCTGACACGGGCCAATTCCGCATTACGGA
AAATGTCTACAGCAACGGAAGATGATACCGCGGTAGAGAGTATTTATCAA
GAACTCGATCAAGAGCTTGACAATGAAGTAGATAGTGACGAAAGTGACAT
TGAGGGCGTTGATGGGGCGCCAACGCCATGCACCACACCTGATCTCCCGC
TACCAGTTGGCGGAAATCAAAAATACGCATTTACGGAAATGAAAGAGTTA
TTTACTGACGAACAGATTAATGAAATGATGGACATTGATTTGAAGAAGCT
TTCAAAACAAAATAAATTGAGTTTTGATGAGAAAGAAGAATTCCCAGCTT
TCGCGCTGCTGAAAAGTTACGCTGCTAGTTTGAATAAATAATGCGAGAGG
GAGGCTCTTCGTTGTTTTTAGTTTTCATCTAGTAAATATCATAGCTCGCA
TCACCCTTCGCCCTGTATAAAAGGGGGCGGGGATAGAAATGTGCTGAAAA
TCAGAGTTTTCCAGAAAAAGTGAAGTTTAAATAAATTAGTGAGGTTCATT
CAACAGGGGGGGGGGCGGTTTTCTGCTTGAAGAAATCCCACAAATGTTGA
CTTCCAAATGGAAAGGTTCCAGGATCAACAGGAATACCTCGATGCTGCCA
CGGTGGTAACGCGCCCACAAAGAATTGAACCTAATCTTTCTAATTTTCTA
ATTGTGAAGTTTTGACATCATTTTGAAATTCTAAAAATTTTCTTGCTTAA
GAAAGCGAGGCGTTGATCTTGAGGAAGTGACCTACATTTTAATTAAGAGT
TGCATCCTAAACAATTATGTCATGTTATGGCGAATTTCAGGGATAAATTT
CAAATTGCCTAAACTTTGAGAAGGGCCCGTGGCGTTTTAGAACGCCATGG
AAGGGTCATATATTTTTGTACTTAGATTTATAATATTTTGTAACACCAGA
TAATTTATTTTTTTGCACTCATACTATACTTAGCATTTTTTTTATTTCAG
CAAAACTTGTTATAGAGAAACGTTGACTTGTTCCCGGTTCTATAATTCGA
TGTTTAAATCTTTCTTGTCGGCTTGGGCGACCATCAGCGCTTTCGGAGGG
TGTATTTCGACCAAATTCAGGGACCCTCTTATGAAGAAAAGCTTAATAGG
TTTCCGGGCTAATCTGTATCAATATAATTTTTGGCGCAGACAAAATAGGC
TGTAACTTTTGATAGACTTCTAATTAGATAGCGATTTTGTGCTTATTGAA
AAGATATTCGAGAGTGAACATTATAAAAGATATCCAATAAAAT

Coding sequence (CDS) from alignment at scaffold_117:388527..395069-

>TCONS_00046805 ID=TCONS_00046805|Name=TCONS_00046805|organism=Clytia hemisphaerica|type=CDS|length=6909bp|location=Sequence derived from alignment at scaffold_117:388527..395069- (Clytia hemisphaerica)
ATAACAATGTTTTCACGGAGAAGCCGAAAAAGAAATCGTCCAAAAAGTCA
AAATCCAAAAGTTTGAAATCTACTTCACCGGAAGAAAATGTATACGCTTC
GATACCGGAAGCGAATGATACTAACGGTAGCGAAAAACAACGGGCAAGCA
CAATCGCAGAAGAAAGTTTATCTTCTTCCACAAAGGAAAAAGTGGAACTT
AAAAAACGGTCTAGCTCTGTTGCGGACACCCTGACACGGGCCAATTCCGC
ATTACGGAAAATGTCTACAGCAACGGAAGATGATACCGCGGTAGAGAGTA
TTTATCAAGAACTCGATCAAGAGCTTGACAATGAAGTAGATAGTGACGAA
AGTGACATTGAGGGCGTTGATGGGGCGCCAACGCCATGCACCACACCTGA
TCTCCCGCTACCAGTTGGCGGAAATCAAAAATACGCATTTACGGAAATGA
AAGAGTTATTTACTGACGAACAGATTAATGAAATGATGGACATTGATTTG
AAGAAGCTTTCAAAACAAAATAAATTGAGTTTTGATGAGAAAGAAGAATT
CCCAGCTTTCGCGCTGCTGAAAAGTTACGCTGCTAGTTTGAATAAATAAA
GGGATGACAACACAAAGACAAAGTACTGTTAGTTCTGTTTCAACTGGCTC
AACAAACTCAAAAGCTGCAGAAGTCAGCAAAATCGGAAATGGAAAGAGAT
GATTGGATGATCACTTTAAGAAAAGCATCTGACGAGAAAAGATTCAGTCG
TTTGTAGTGTTGAAATCACCAAAATATGCTTTTGAAATTGTCACAAAGTC
AAGAACATACAGCATGGAATCAACTCTTCTTGGTGTCATCCAGTTAATTG
ATGGCTGGCGAAAAAGATGGTTTGTTTTGAATTCTGATGCTTTGAAGTAT
TACAATCCTGGTCATGAGTATAACATGGCTGATGCGCAATTTTGGAAAGA
AGGGTTTTTACACAAAGCTGGTAAACACAGTTTTCAGATAACAATGTTTT
CACGGAGAAGCCGAAAAAGAAATCGTCCAAAAAGTCAAAATCCAAAAGTT
TGAAATCTACTTCACCGGAAGAAAATGTATACGCTTCGATACCGGAAGCG
AATGATACTAACGGTAGCGAAAAACAACGGGCAAGCACAATCGCAGAAGA
AAGTTTATCTTCTTCCACAAAGGAAAAAGTGGAACTTAAAAAACGGTCTA
GCTCTGTTGCGGACACCCTGACACGGGCCAATTCCGCATTACGGAAAATG
TCTACAGCAACGGAAGATGATACCGCGGTAGAGAGTATTTATCAAGAACT
CGATCAAGAGCTTGACAATGAAGTAGATAGTGACGAAAGTGACATTGAGG
GCGTTGATGGGGCGCCAACGCCATGCACCACACCTGATCTCCCGCTACCA
GTTGGCGGAAATCAAAAATACGCATTTACGGAAATGAAAGAGTTATTTAC
TGACGAACAGATTAATGAAATGATGGACATTGATTTGAAGAAGCTTTCAA
AACAAAATAAATTGAGTTTTGATGAGAAAGAAGAATTCCCAGCTTTCGCG
CTGCTGAAAAGTTACGCTGCTAGTTTGAATAAATAAAGGGATGACAACAC
AAAGACAAAGTACTGTTAGTTCTGTTTCAACTGGCTCAACAAACTCAAAA
GCTGCAGAAGTCAGCAAAATCGGAAATGGAAAGAGATGATTGGATGATCA
CTTTAAGAAAAGCATCTGACGAGAAAAGATTCAGTCGTTTGTAGTGTTGA
AATCACCAAAATATGCTTTTGAAATTGTCACAAAGTCAAGAACATACAGC
ATGGAATCAACTCTTCTTGGTGTCATCCAGTTAATTGATGGCTGGCGAAA
AAGATGGTTTGTTTTGAATTCTGATGCTTTGAAGTATTACAATCCTGGTC
ATGAGTATAACATGGCTGATGCGCAATTTTGGAAAGAAGGGTTTTTACAC
AAAGCTGGTAAACACAGTTTTCAGATAACAATGTTTTCACGGAGAAGCCG
AAAAAGAAATCGTCCAAAAAGTCAAAATCCAAAAGTTTGAAATCTACTTC
ACCGGAAGAAAATGTATACGCTTCGATACCGGAAGCGAATGATACTAACG
GTAGCGAAAAACAACGGGCAAGCACAATCGCAGAAGAAAGTTTATCTTCT
TCCACAAAGGAAAAAGTGGAACTTAAAAAACGGTCTAGCTCTGTTGCGGA
CACCCTGACACGGGCCAATTCCGCATTACGGAAAATGTCTACAGCAACGG
AAGATGATACCGCGGTAGAGAGTATTTATCAAGAACTCGATCAAGAGCTT
GACAATGAAGTAGATAGTGACGAAAGTGACATTGAGGGCGTTGATGGGGC
GCCAACGCCATGCACCACACCTGATCTCCCGCTACCAGTTGGCGGAAATC
AAAAATACGCATTTACGGAAATGAAAGAGTTATTTACTGACGAACAGATT
AATGAAATGATGGACATTGATTTGAAGAAGCTTTCAAAACAAAATAAATT
GAGTTTTGATGAGAAAGAAGAATTCCCAGCTTTCGCGCTGCTGAAAAGTT
ACGCTGCTAGTTTGAATAAATAAAGGGATGACAACACAAAGACAAAGTAC
TGTTAGTTCTGTTTCAACTGGCTCAACAAACTCAAAAGCTGCAGAAGTCA
GCAAAATCGGAAATGGAAAGAGATGATTGGATGATCACTTTAAGAAAAGC
ATCTGACGAGAAAAGATTCAGTCGTTTGTAGTGTTGAAATCACCAAAATA
TGCTTTTGAAATTGTCACAAAGTCAAGAACATACAGCATGGAATCAACTC
TTCTTGGTGTCATCCAGTTAATTGATGGCTGGCGAAAAAGATGGTTTGTT
TTGAATTCTGATGCTTTGAAGTATTACAATCCTGGTCATGAGTATAACAT
GGCTGATGCGCAATTTTGGAAAGAAGGGTTTTTACACAAAGCTGGTAAAC
ACAGTTTTCAGATAACAATGTTTTCACGGAGAAGCCGAAAAAGAAATCGT
CCAAAAAGTCAAAATCCAAAAGTTTGAAATCTACTTCACCGGAAGAAAAT
GTATACGCTTCGATACCGGAAGCGAATGATACTAACGGTAGCGAAAAACA
ACGGGCAAGCACAATCGCAGAAGAAAGTTTATCTTCTTCCACAAAGGAAA
AAGTGGAACTTAAAAAACGGTCTAGCTCTGTTGCGGACACCCTGACACGG
GCCAATTCCGCATTACGGAAAATGTCTACAGCAACGGAAGATGATACCGC
GGTAGAGAGTATTTATCAAGAACTCGATCAAGAGCTTGACAATGAAGTAG
ATAGTGACGAAAGTGACATTGAGGGCGTTGATGGGGCGCCAACGCCATGC
ACCACACCTGATCTCCCGCTACCAGTTGGCGGAAATCAAAAATACGCATT
TACGGAAATGAAAGAGTTATTTACTGACGAACAGATTAATGAAATGATGG
ACATTGATTTGAAGAAGCTTTCAAAACAAAATAAATTGAGTTTTGATGAG
AAAGAAGAATTCCCAGCTTTCGCGCTGCTGAAAAGTTACGCTGCTAGTTT
GAATAAATAAAGGGATGACAACACAAAGACAAAGTACTGTTAGTTCTGTT
TCAACTGGCTCAACAAACTCAAAAGCTGCAGAAGTCAGCAAAATCGGAAA
TGGAAAGAGATGATTGGATGATCACTTTAAGAAAAGCATCTGACGAGAAA
AGATTCAGTCGTTTGTAGTGTTGAAATCACCAAAATATGCTTTTGAAATT
GTCACAAAGTCAAGAACATACAGCATGGAATCAACTCTTCTTGGTGTCAT
CCAGTTAATTGATGGCTGGCGAAAAAGATGGTTTGTTTTGAATTCTGATG
CTTTGAAGTATTACAATCCTGGTCATGAGTATAACATGGCTGATGCGCAA
TTTTGGAAAGAAGGGTTTTTACACAAAGCTGGTAAACACAGTTTTCAGAT
AACAATGTTTTCACGGAGAAGCCGAAAAAGAAATCGTCCAAAAAGTCAAA
ATCCAAAAGTTTGAAATCTACTTCACCGGAAGAAAATGTATACGCTTCGA
TACCGGAAGCGAATGATACTAACGGTAGCGAAAAACAACGGGCAAGCACA
ATCGCAGAAGAAAGTTTATCTTCTTCCACAAAGGAAAAAGTGGAACTTAA
AAAACGGTCTAGCTCTGTTGCGGACACCCTGACACGGGCCAATTCCGCAT
TACGGAAAATGTCTACAGCAACGGAAGATGATACCGCGGTAGAGAGTATT
TATCAAGAACTCGATCAAGAGCTTGACAATGAAGTAGATAGTGACGAAAG
TGACATTGAGGGCGTTGATGGGGCGCCAACGCCATGCACCACACCTGATC
TCCCGCTACCAGTTGGCGGAAATCAAAAATACGCATTTACGGAAATGAAA
GAGTTATTTACTGACGAACAGATTAATGAAATGATGGACATTGATTTGAA
GAAGCTTTCAAAACAAAATAAATTGAGTTTTGATGAGAAAGAAGAATTCC
CAGCTTTCGCGCTGCTGAAAAGTTACGCTGCTAGTTTGAATAAATAAAGG
GATGACAACACAAAGACAAAGTACTGTTAGTTCTGTTTCAACTGGCTCAA
CAAACTCAAAAGCTGCAGAAGTCAGCAAAATCGGAAATGGAAAGAGATGA
TTGGATGATCACTTTAAGAAAAGCATCTGACGAGAAAAGATTCAGTCGTT
TGTAGTGTTGAAATCACCAAAATATGCTTTTGAAATTGTCACAAAGTCAA
GAACATACAGCATGGAATCAACTCTTCTTGGTGTCATCCAGTTAATTGAT
GGCTGGCGAAAAAGATGGTTTGTTTTGAATTCTGATGCTTTGAAGTATTA
CAATCCTGGTCATGAGTATAACATGGCTGATGCGCAATTTTGGAAAGAAG
GGTTTTTACACAAAGCTGGTAAACACAGTTTTCAGATAACAATGTTTTCA
CGGAGAAGCCGAAAAAGAAATCGTCCAAAAAGTCAAAATCCAAAAGTTTG
AAATCTACTTCACCGGAAGAAAATGTATACGCTTCGATACCGGAAGCGAA
TGATACTAACGGTAGCGAAAAACAACGGGCAAGCACAATCGCAGAAGAAA
GTTTATCTTCTTCCACAAAGGAAAAAGTGGAACTTAAAAAACGGTCTAGC
TCTGTTGCGGACACCCTGACACGGGCCAATTCCGCATTACGGAAAATGTC
TACAGCAACGGAAGATGATACCGCGGTAGAGAGTATTTATCAAGAACTCG
ATCAAGAGCTTGACAATGAAGTAGATAGTGACGAAAGTGACATTGAGGGC
GTTGATGGGGCGCCAACGCCATGCACCACACCTGATCTCCCGCTACCAGT
TGGCGGAAATCAAAAATACGCATTTACGGAAATGAAAGAGTTATTTACTG
ACGAACAGATTAATGAAATGATGGACATTGATTTGAAGAAGCTTTCAAAA
CAAAATAAATTGAGTTTTGATGAGAAAGAAGAATTCCCAGCTTTCGCGCT
GCTGAAAAGTTACGCTGCTAGTTTGAATAAATAAAGGGATGACAACACAA
AGACAAAGTACTGTTAGTTCTGTTTCAACTGGCTCAACAAACTCAAAAGC
TGCAGAAGTCAGCAAAATCGGAAATGGAAAGAGATGATTGGATGATCACT
TTAAGAAAAGCATCTGACGAGAAAAGATTCAGTCGTTTGTAGTGTTGAAA
TCACCAAAATATGCTTTTGAAATTGTCACAAAGTCAAGAACATACAGCAT
GGAATCAACTCTTCTTGGTGTCATCCAGTTAATTGATGGCTGGCGAAAAA
GATGGTTTGTTTTGAATTCTGATGCTTTGAAGTATTACAATCCTGGTCAT
GAGTATAACATGGCTGATGCGCAATTTTGGAAAGAAGGGTTTTTACACAA
AGCTGGTAAACACAGTTTTCAGATAACAATGTTTTCACGGAGAAGCCGAA
AAAGAAATCGTCCAAAAAGTCAAAATCCAAAAGTTTGAAATCTACTTCAC
CGGAAGAAAATGTATACGCTTCGATACCGGAAGCGAATGATACTAACGGT
AGCGAAAAACAACGGGCAAGCACAATCGCAGAAGAAAGTTTATCTTCTTC
CACAAAGGAAAAAGTGGAACTTAAAAAACGGTCTAGCTCTGTTGCGGACA
CCCTGACACGGGCCAATTCCGCATTACGGAAAATGTCTACAGCAACGGAA
GATGATACCGCGGTAGAGAGTATTTATCAAGAACTCGATCAAGAGCTTGA
CAATGAAGTAGATAGTGACGAAAGTGACATTGAGGGCGTTGATGGGGCGC
CAACGCCATGCACCACACCTGATCTCCCGCTACCAGTTGGCGGAAATCAA
AAATACGCATTTACGGAAATGAAAGAGTTATTTACTGACGAACAGATTAA
TGAAATGATGGACATTGATTTGAAGAAGCTTTCAAAACAAAATAAATTGA
GTTTTGATGAGAAAGAAGAATTCCCAGCTTTCGCGCTGCTGAAAAGTTAC
GCTGCTAGTTTGAATAAATAAAGGGATGACAACACAAAGACAAAGTACTG
TTAGTTCTGTTTCAACTGGCTCAACAAACTCAAAAGCTGCAGAAGTCAGC
AAAATCGGAAATGGAAAGAGATGATTGGATGATCACTTTAAGAAAAGCAT
CTGACGAGAAAAGATTCAGTCGTTTGTAGTGTTGAAATCACCAAAATATG
CTTTTGAAATTGTCACAAAGTCAAGAACATACAGCATGGAATCAACTCTT
CTTGGTGTCATCCAGTTAATTGATGGCTGGCGAAAAAGATGGTTTGTTTT
GAATTCTGATGCTTTGAAGTATTACAATCCTGGTCATGAGTATAACATGG
CTGATGCGCAATTTTGGAAAGAAGGGTTTTTACACAAAGCTGGTAAACAC
AGTTTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029865XLOC_029865Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046805-proteinTCONS_00046805-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046805-exon-scaffold_117-1575043694:394939..395069TCONS_00046805-exon-scaffold_117-1575043694:394939..395069Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1575043694:394163..394234TCONS_00046805-exon-scaffold_117-1575043694:394163..394234Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1575043694:393790..393825TCONS_00046805-exon-scaffold_117-1575043694:393790..393825Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1575043694:393438..393512TCONS_00046805-exon-scaffold_117-1575043694:393438..393512Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1575043694:392964..393031TCONS_00046805-exon-scaffold_117-1575043694:392964..393031Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1575043694:392067..392140TCONS_00046805-exon-scaffold_117-1575043694:392067..392140Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1575043694:388527..390027TCONS_00046805-exon-scaffold_117-1575043694:388527..390027Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1510915933:394939..395069TCONS_00046805-exon-scaffold_117-1510915933:394939..395069Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1510915933:394163..394234TCONS_00046805-exon-scaffold_117-1510915933:394163..394234Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1510915933:393790..393825TCONS_00046805-exon-scaffold_117-1510915933:393790..393825Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1510915933:393438..393512TCONS_00046805-exon-scaffold_117-1510915933:393438..393512Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1510915933:392964..393031TCONS_00046805-exon-scaffold_117-1510915933:392964..393031Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1510915933:392067..392140TCONS_00046805-exon-scaffold_117-1510915933:392067..392140Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1510915933:388527..390027TCONS_00046805-exon-scaffold_117-1510915933:388527..390027Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1491911889:394939..395069TCONS_00046805-exon-scaffold_117-1491911889:394939..395069Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1491911889:394163..394234TCONS_00046805-exon-scaffold_117-1491911889:394163..394234Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1491911889:393790..393825TCONS_00046805-exon-scaffold_117-1491911889:393790..393825Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1491911889:393438..393512TCONS_00046805-exon-scaffold_117-1491911889:393438..393512Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1491911889:392964..393031TCONS_00046805-exon-scaffold_117-1491911889:392964..393031Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1491911889:392067..392140TCONS_00046805-exon-scaffold_117-1491911889:392067..392140Clytia hemisphaericaexon
TCONS_00046805-exon-scaffold_117-1491911889:388527..390027TCONS_00046805-exon-scaffold_117-1491911889:388527..390027Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:388527..395069 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.8207	10.1753	2.0758	0.800475	18.8583	14.7939	11.1682	12.8984	8.26085	8.62233	8.5077	4.69849	7.33236	7.64557	6.16476	6.99603	10.0243	7.68283	6.25896	9.51866	5.93373	5.71713	14.7186	15.044	6.75295	8.09858	10.2551	7.72236	13.3437	12.815
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH_dom-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046805 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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