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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046764 ID=TCONS_00046764|Name=TCONS_00046764|organism=Clytia hemisphaerica|type=transcript|length=1149bp
CCAAAATTTCTTCAGATCACATCAAAACTCACCATATCTTTGACTTGATG
AAATAGTTACAaaacaaaacaaCACTGTAAAACAATGACTATGGCAAGTG
AAAAGAAAGGGAAGAAAAGAAGCTTCAAAAATGAGGGGCACAAATCGTCA
AAGAAGCCTTTCCTAGAGGAGGAggttgaaaataagattttagcTGATGT
TGACCAAGATGAGATTGACGAAGTACTTGCGGCACAAGAATTTCCAATGC
AAAAAgtatcaaagaaaaagaagaaagaatctGTAACTGAAGTAGAATCA
GAACCAATGGATGGTTCTAATGAGACACCACCAGCTATTGATTATCTGTT
GGGTTGGAAATCTAAAGACAAAGATTGGAAATTTAGAAAGTTGCGACAAA
CATGGCTCTTGCAGAATATGTATGATAAAGAAAAGGTTTCCAAAGCGAAC
TTTAAGATTTTGTTGGAATACCTGGAAGATTTGAAAGGTGCAGCTAGAGA
ACAAACTTTAAAAGAAGCAAAAGAATTTGTTGAAGCTAACGAGGACAATG
aagAATGCACTGAGAAGAGAAAATTGAAGCGATCGTTAAACGTCCTCAAA
GTATTGACCTGATTCAAAAGCTGAATATACAGTACAAAACGGTGCTGGTG
AAATGACGCCATCATGATTGAGCAACCCCTGCATTTGGCttccggaaaaa
gaatttaCATCAAATGGTTTAGAGACCAATTTTGGAGGTTAAAATCCCTC
TGAATCTCTTTCAAGGAAATAAAAGGAAAGGGGGAATCGTGTTCATTCCT
CTCTCAACAATTACAAAATGCAAAGAGTTGTAATGTAATGGTCACACAGT
TGACACTCAATGAACATCGATTCAATGTTCATAAATGCTTTACAAacgtt
gtttttcattttcgtgaTCAATGGACATATATTTTATcacaaagaaatat
attttattacaaaatatGATCAAAAGTAGTGTTTATCAATGAAGGTATAG
CTGTAGACTTAAAAAAGACCTGTTAGAATAATGTTAGATTTATACAGGTT
AATTccttaaaggccggtctccacttgcgcacgctgcgatcgcacttttt
ggcttcaatcctttttgcttggaaaaaagattacgtcatgaaaatGTAG Run BLAST on NCBI protein sequence of TCONS_00046764-protein >TCONS_00046764-protein ID=TCONS_00046764-protein|Name=TCONS_00046764-protein|organism=Clytia hemisphaerica|type=polypeptide|length=175bp
MTMASEKKGKKRSFKNEGHKSSKKPFLEEEVENKILADVDQDEIDEVLAA
QEFPMQKVSKKKKKESVTEVESEPMDGSNETPPAIDYLLGWKSKDKDWKF
RKLRQTWLLQNMYDKEKVSKANFKILLEYLEDLKGAAREQTLKEAKEFVE
ANEDNEECTEKRKLKRSLNVLKVLT Run BLAST on NCBI transcript from alignment at scaffold_117:65511..77216+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046764 ID=TCONS_00046764|Name=TCONS_00046764|organism=Clytia hemisphaerica|type=transcript|length=11706bp|location=Sequence derived from alignment at scaffold_117:65511..77216+ (Clytia hemisphaerica)
CCAAAATTTCTTCAGATCACATCAAAACTCACCATATCTTTGACTTGATG
AAATAGTTACAGTAAGTTTAGTTTAAAGATTACATACTCTCAGACTTCAT
CTTCGAATTGACCCAATTATCTTGCTAAATAAACATAGTCTTTGACTTTC
tagcgcacaacaagattctgttgttgtttttccGCCGCGGGAGGACAGGA
GGACTATTTTCTTCAGACGGTTATTTTTCAAGCAGCTTTAGAGGTTTAAC
GTGTGcataagaaaattatgaccagctgttatcaggttagcttACAATGG
CATTAACAAATATTTCTCACCTGACTCTCCttgttgaaaattgaatagac
cttttttcaatcaaagaggcgggccaccctgttgaataattatgtagtcc
agcagaaaaacaatgatatatacacccatgcataattattacaatatgca
tgaaacagtaattatgcattgatgtatcattgtttgtatggctggactac
atacaccgtagagtcgtttaatatcgacatgcgtcttgttatttcgacat
agctgtaggctggtcttcgaaataaaaaatcaaacataaacaaatacata
ctgtgagtggtcctaaatccgacagccctgcctaattccgacaccccaaa
taaatattatgaaaaaaattctatgtttacaaacatttcacgaccctcga
catgacccgagaattctcgggccaaaacttttattggaattcacgtaaag
cccgagtatggcccgagctggcccgagaatttgggccgtgttcgggccac
acgcgggccatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcatataaatattaaatgtc
ttatttggtatgaaaacatagttataaatatacttagggtggaaatattt
gctagtaaactggtcctggttttaaactgaagcatgtccacgggaagctc
gtaaagttttttgagcgatataaacaaaacagacaaatctttttttgtac
tattttatttgactggacatgctgaatcaatttaacatttaacatggccc
gaacatggcccgaagaggcccgagaattctcgggccatgtcgagggtcgt
aacATTTCACTAACATTtccttctccaagttgaacaataaactattgcaa
ggactttataatgtcaagatgtcaattaatgtgatcaaaaaagtgcgagt
tgtaaaaatgATTACCTCTACTATTATTCTAAAtctgttgctcgtgttta
aaacattaacaattttgtaataaaaaattatgttttgtacaagaagcaat
tattgtaatTTGGTTCAAATCAacgtgtatcaaatctctcagtttagttg
acactttggtatctttattgcgtcacagcgaaaggtttatttttattcta
gtttgtatctttgaaagaccccattggatttaggcagggctgtcggattt
aggaccactcacggtaccaaagttcagttaggaacatttggcgagttcct
gtacgcggaataaaaaatggcgttcgtgtcttttcgcactttttttagcc
tagacgatgtagcaaacatactaagtataagcacactgtgcttttaactg
gctgacaatttcttttgcgtcggaaaaactttttcaaactttcgatgatt
gatcaaactgttacaatgaaaattatccagcgcattttttatcttcttac
cttcttcatctttaatgaagcactcgaagtttactgaaagtaagCACATA
AGGTATTATTATAATTAATGATATTCATTTAAACACGCTTCGttatgcgc
tgcggtggagtgcatgacgtaactcgcgcggcaactaactcgccttctgt
tggaagatcatattgggcgttttggcgttttgcgagcgcctttgtctttc
cgcaactctttccaccattttagatggccttaacaatagatccaaatggg
cgccataatcttggaagattaTTTGTTTTCgtctccagctttgggaagta
gcaatgtttttggttgtttccaatggaaaatggtaagaaacttaagttta
caagtgtcatttagtttttgctggcttatagaatggcaggatcctggatg
gtttccctaactgaagttatcaatcaatcactaaattgtactcaccctat
cacgtcacagattgttgaaacgtaagaaacgtgaagtggttttttttcga
aaagaaaactttaacgctGTAGTCACtactaaaaactaattagcatgctt
tcattcaACGGAACGAAGATATCGAAAtgaaaacaacattttgcacgcaa
gGAAtttttgaatagacctttttaccgtgaaccgaaaataataaaaagaa
cccggtttccttttgaatttaatttgaccgccatactggccatcccggcc
tagagcgtgtgtttttgataaataaggaaggggaaaccaggctaagcgcg
aaaattatttttatcacgtgacttgaagcgtaataaagttgtaaaatttt
aatgatggtcacaagaaagttacgaggaagtttgcatgcgtttcgtgtgc
tgtgtaaaactgcttataatttggctgttttttttttaattgaaaggatt
gaaaTGTTTATCGagcttctagtttgatggatgaacttgtttgataagaa
tgataccaagaatttcattcaaggtttgttttgataattttacagatccg
gtgtcgactttaaaagacgcatgtcgatattagacaaTTCTACggtaatt
attcaacagggttgcctctttgaaaaaaggtgtattataaaGTTTTAGGT
AAAAGTATGTTTAAGTTTTCTGTGTTTGTATAGACAGTCAGGTCGCTGTT
CTCAAATTTAACGATACAGCTCTCTTTTCTTGAAATGCTATGGAGATAAT
AACACATTCCCGCAAATCTATAGAAAAGGGTTggatatagaccttttttt
aaaggttaacagaaaaaaccactgcttcctttgttagagataaattgaag
caATTCTACAAGATTTAGACCGATTACCTCGCGAGGGGTCAGGGAATTAC
CAGTTATTATATCCGGATAGCATtttacaaaaacattattttcaacCTCT
CGATACTAACTCTAAGGGTATAACAAATGGAACAAACAATATATCAGTAA
CAGTTAATTGTTAAAAGTAAGTTTGTTAgttaaattttaaataatttggg
tggcaataaataaatataaataataaataaataatagttTTATAAATTCT
CGCGGCAGGCacagaatgaaaaaaatatcttcATAATTTCCGCATTAAAA
TGACATAATGTATTGGAGTTGATTTGAAATACAATGTAAGCTCTCTCCTT
TCCACTCTGATGAACTCCTCATTCCCGCATTAAGTTCTGCATGCGAGAAT
CGAGACGGAGCTGCGCAATCAAATTCGTCATTTTCTGTTTCTCAGATTTT
CTCATCCCCTCATTTTTTAATTCTCTTATTTCTTCTGCatctaaacaaaa
agaaaagttaGAATTAATAgcgcaaaaatcttcatttttctagTTCCTAG
TCCCGTGCAAAATGCAAGGGTTGTTTTCAGTAAAACCTTacgtcactttc
attttcaacacCCTGTGCATTTGCAAGAAATCGCAGGCGCCGAAACCCCG
TGCAAATGATTGCAAGGATTTGTACTAGAGACTGGTTAAGAATCAAGGTA
ATAAGGAGGTCCGTAAGAGATGTCTCAGATGACTTTTAAAGTGAATTAGA
GGACtgagatattgaaaataaagttttcgaaaaatacCGCCTGGATAACC
ATCCGGGTGTTTATAAATGTCGCTCCAAACATTTCGACATTTAGGGAAGA
AACATAAATGTGGATTGGTTTTCAAACGCGTTCTTTCTCGAAGTAACGGT
AAAAACACTTTCCACATACACTGCATACACGTAAGTACACTTGACAAGCT
ATttacaaacattgaaaattatCCTATTTCTTACACATTTATTAAATACA
AGAACAATAGACGGCACAGAACTCTCACGGGACTAACAAAACATTAATTA
TGCACAAATGACGTAAAGTTCCTAAGACAATCAATACACTAGAGACATCC
AAAATATAATAACAAACCAATAAACCTATACAAAATGCAAATGCTATAGT
ACAATGGAAACGTAAAAATAATCTAACCAAAACTACTGCCTAGCGGCAGT
AACACTCCCCACCGTCAAGATATTGGCATCTTGACCAAACTGGTACCCAG
TACTCATAACTGTAAGCAAATATAAAACCACATTCGGGATTAACCCATTG
ATTAGTCCAGATAACGAAACGTAAGTCCAACGGGGATAGCCAATAACAAC
CTTTTGAAAATCTGACAAAAGGAAGAACGTCCAAAAACTTCTCAAAAACA
GCTTGCAATAAAAGTTATTTACCAAAAAACGTTTCAACTGAAGTTTGCAT
TTCCTTTTTGGTTTGTAGTTTCGGGCATTTAGGCAAACTGCAAGGTTAGG
GGAACTGACGATAGGATGCACTTTTGATCTTTTGGAAATGAGAGGAGTTT
CATTATCGAAAGTTCGtttatctttaaaatttctACTCACATTTAACATT
GAAACATTCAGCTTCTCTGCAATACGTGCAACACGACGAGGTTGAACTTC
TTTGACAACCATGTGATGAGACAAAATTTCTGGTTGAACTTTTCGGACGA
TCTCGTGACAAACATTTTCGGACACTTCAGTAACGACGACAACATTGGGA
TACGACTCGACACTCTCGACCACGCGAGAcaaaatttcttgttttggCTT
TCCAATAGTCACACGAACATTTTTGACTACTTCAGAAACAACACTGACTT
TAGGGTAAGGTAGGAAGGACACTTTCGACCATGTGCGACTCAATTTTGGG
CTTACAACTTTTAGTAACCACGCGACAAACAGCTCTATCAACAACTGGAG
AAACTACCAAAATTTGCGGATAAGGATAACTTACGGCCATGCTACATTCA
ACACGATCCAACTTTGGAACTACTTTCACCTTCTTGAAACTAAGGGGTGC
TGAATCTATAACATCTCGAGCCGCACCAATGAACATATCTCGAACTGCAA
ATTCCTTTTGGGTTTCCTTTTCTCCGTACACCGAGAGCATCAGTGAGTAA
TTTCTGTCATAAAGTAATTTAAAATCATTTGCCAAACCTGTAAGTCGTTT
CGATTCATGTTGATGAATAATTGGGTCAAGTTCCGGATCAGGATTGACAC
CACTGTACACACGTTTTAAAAATCTTGTCGACTCGATCAATAATTCGACC
AACTTGAAACGTTCATTATTAAATCCATGAATTGGGTGATTGGCCATCTT
TATTTCAGTTCCGATTCTTTTGATCTCGAAGCAAACTGATCAACTTCTAG
CATCCAATATACAATCATACGAAGCTGTCAACATACACAGTGCACGTCAG
TGTTTTTACTATAAATGTCGCTCCAAACATTTCGACATTTAGGGAAGAAA
CATAAATGTGAATAGGAGACAGAAATGCAGATGAAACAGAAATACAGATA
CTAATTTAATTTACTTGTGAGTGGAGAGAACGAagatattttgaataatt
tgactgGTCGAAATATCTCAGCCTTAATGGACAAAAAGGAACCTAACCTA
AGGAAACCAAACAGAAAATGGAGAAcagaaaatgtaaaatgcaAACACCA
ATTCTTGAACTTAAACCAACTTAAAATGtaacaaaaccaaaaagaacCGA
AATAAAACGACAGTAAATTAAATTTTAGTAAAACGCACCTCTCACACACA
AGACACTCACTCACGTCTCTCAGTGTTGAACTAATTCCTATCTACCAAAT
TTACAGTTAATAAACATATCCTAATTTCCCTAGAGGAATTACAAATGATA
TATAAAACGTATAAAACGCAATTTGGGGATACAAAAGACACTTAAAACAA
AAGGGACACTAAACAAAAGAGGACTCAAGAGACACATGAAAACTGAAAGA
ATCTACAGGGAATACTAATTAAAACACAGAAACATTAACAACACGGCCAA
TCAAATGTTCATAACGATGGAGCACTCTCTCTCCATCAAcagtgtttttg
ataaatagaTCTTAGCGCCCGGAACACCCGGATTACGCCCGGAATATTCC
GGGCGGTGTCCGGGCGTGTTCGAgggtcctgttgaataattatgtactcc
agcataaaaacaatgatacagccacgcataattactgtatcatgcatatt
ttaaaaaccatgcatggctgtatcattgtttttatgctggagtacataat
tatttaacatggctgcctctttaaaaaaaggtctattatcacccttttat
tttgaaattgaattctTCAGTAAAACAATGAAACGTGCAATTGAAGTAAA
GATTACGGGTGAAGCGAAGAATGGAATTGGATAAAATTACGACTTCCTGA
CTCAAAATAAGTCTGGAAAACAAGGCATATATGCCAGATATATCCAGCGT
AGACATTCAATCTCAAAGACCTGGTTCAAGGCTACGGTAAAAACTATCTG
GTGGCATATTCAGTGCTCGAATTAACGTATTGCGTTTCACGATTCGCATT
GCGTTTTTGgaaatgtacgaagcaaaaattaaaaaaactcagCAAAATTG
CGATACAACATATCTAAAATTTTACAGCTActaaatcagttttattgaaa
aacatttATAAGAAGCTTCTTGTTGAGCCTCCAAGCAAATAGAACTGTTA
TTTGGCTTATAAATTAGTCTATAGAATGGAAAATGCATTGTATATATTCA
GATTTAGCTCACTCTGTTTGCTAAAAAATGCAATGCACTTTTAAATcgta
aatttttggtttttaggaAATATGAATACCTtccagtgaacataaaatat
tcttacgaaaaagtctgaaaatttgttaaaaaaagtatattggccaaaat
tgacattttcaatttttgcctgtCGAAGGTTGGAGCTTGGGGGGTACGCG
CAGCCCAGTacattacaggcaaaatttaaaaatataaattttggctaata
gacttcttaaaaaggattttgagactttttcgtaataatattttatgttc
actggaAGGAATTTAttccaaaaaccaaaaatttgtgaattttggcaatt
tttttttccgatgacgtcatcgttttatgacctcattttgccttatttcc
tttcctaatatctcctgatatattcattttcagatataggttgtgacctt
tttcttaatcagtttttcatgctctttcgaatggaacaaaactttttcaa
ttttgacggctttttattttggttgccttAGTAACTAATGACGTCAGTTT
TCATGGCAACGggtggtcacacccggccccaGCCACCtctatttgattta
ttttcatgaTTATTACCAGttttttttgttgcatttttttacaaattttc
tttctttcattgaaattcaacttttttttataaaacaaaaggATAGACTG
ATTTTGAACGTTTTTGAGTACTATTTGAAAGTAACTTTTCTTTTCAATCA
Atggagcataacttttgatctaatgaagcaagcttgataaatgacccatc
aaaatttaagtcgaTATAtcgttttttaatgaaagaagagtcattctttc
aaaaattttataactTCAGTAAATTCACttgaaagagagaaacttttttg
tgactCAAAGTTCTCTTTATACCTTCAGACCGAAGATAAAAGACAATCAT
GATCTGATTTCAGGTTACTTTTAGCATATTCTATTGAAACTgatcattta
gaaacaaaacaaCACTGTAAAACAATGACTATGGCAAGTGAAAAGAAAGG
GAAGAAAAGAAGCTTCAAAAATGAGGGGCACAAATCGTCAAAGAAGCCTT
TCCTAGAGGAGGAggttgaaaataagattttagcTGATGTTGACCAAGAT
GAGATTGACGAAGTACTTGCGGCACAAGAATTTCCAATGCAAAAAgtatc
aaagaaaaagaagaaagaatctGTAACTGAAGTAGAATCAGAACCAATGG
ATGGTTCTAATGAGACACCACCAGCTATTGATTATCTGTTGGGTTGGAAA
TCTAAAGACAAAGATTGGAAATTTAGAAAGTTGCGACAAACATGGCTCTT
GCAGAATATGTATGATAAAGAAAAGGTTGGGATATAGTTTTGCTGCTTTT
AATTCCTACTTTTAACTTTGTGCTTGAAGTTACAGAATACACAACTTTGT
CCCTTGAGTTGAACATTTTGTGACTcaataataattatttttctattcGT
TAAAATCGTTTTACCAATCTATAGTATTCAAAAGTTTTGCCTTAATCTAC
TGTATTTTTATTAAAGATAATATTTACAGATTTCCTTTACAGATTTACAG
AAACCCTTCGTGCTGTTAGAATCTTAATTATCAtctaagtttgaaattat
tactCTTGTTTAAGGTTTCCAAAGCGAACTTTAAGATTTTGTTGGAATAC
CTGGAAGATTTGAAAGGTGCAGCTAGAGAACAAACTTTAAAAGAAGCAAA
AGAATTTGTTGAAGCTAACGAGGACAATGaaggtacacatttttttttaa
tcttaaatGTTCttgaacatccaaaatttttgaagcattgggatgtcctt
aacttttttcgttttttagcctaaaaaagttcttaatatgttcttatttt
tgccattttttgagtaccttaagggaacttattatGCAgtaactaatttt
ggcggatttggcgaatttagacgaaattggcaaaaattagttaccgccaa
aattaaataatttgctcactcgccaaaataagttcccgtcaaagttaaat
tttttgtttccttgcctaaataactcCTGAAAtccatcaaaattgctcaa
aataaggcaaaatagaacagatttacgctgtcattcgccaaaataagttc
ccgccaaaattaaaaaattttaggatatttgctgcccgtcaaaattagtt
cccgccaaaaaaagttcccttaaggtatttttgtccattttcctaagaaa
ctcAGTGTTTTAGAGTCAGTAAAGCCttaataaaatgttcttaacttgtt
cttaatattttggccatcgaagccttatgttcttatatagtttgttctta
tataaaaaaacgtgtaatctaaaaagtttattattttggtttgtacTTGA
TTAGAGGCCATCCATAttgtacgtacgcagtgaaggggggagggggaggg
ggagtAGCAAAAGCGTACGTCTAATTTGTTTAAATGGCGTcgtttctatt
gttctctgcgtacaaggggagAGGAGNCTCTCTCAATAACAATTACAAAA
TGCAAAGAGTTGTAATGTAATGGTCACACAGTTGACACTCAATGTACATC
GATTCAATGTTCATAGATGCTTTACAAacgttgtttttcattttcgtgaT
CAATGGACATATATTTTATcacaaagaaatatattttattacaaaatatG
ATCAAAAGTAGTGTTTATCAATGAAGGTATAGCTGTAGACTTAAAAAAGA
CCTGTTAGAATAATGTTAGATTTATACAGGTTAATTccttaaaggccggt
ctccacttgcgcacgctgcgatcgcactttttggcttcaatcctttttgc
ttggaaaaaagattacgtcatgaaaatGTAGCACGCGCTCGAatgtcaac
ttttttcaaccgttacgtcagatcgcgccaatggagttgcttcatttttc
ttttgacgaatagcgtggaagctttgctcgaaaaagtgcgatcaaagtgc
gcgcaagtggagactggCCTTAATAGGTTGTGTGACCCCCGTGGTTTTTA
AACTAAAACGCCAGATCAAAAGTGATAAATATCACCAGATTTCCAACTAG
ATGCTTCAATGTGAACACGCAACAATAAACATATAGATTTTATCCATCAT
TTGAAATACGATACATATCTAAAGGTACAACTTTAATTTGCCAAGGAAAC
ACCCTGTGTCNTAAGATTGCCATCTaagccaaaaaattaaaatctgagAC
TTGGATTAAGCTCTCAACTTATTTTTACATTTCAGGTAAATATCAGCCTC
GTgattttatgaaattgttctcgtacaagaacttttgattttttttctaa
tgtaCACAGAGATCTACTCGCTTTATCGACTCCAGTCTTCATTTTTAGAG
Ttcgataaaaatgtttttcaatctaactttttaactttttttaactaatt
cgtgttaataaaacgattagtaatattcgtgtaataagtgtaataaggta
tgtCACTTGTAACCAATCATAGCCCTTGGGTCTGtgaatgtcagaagaca
ttgcagtagTCATTAAGACCTCTTCCTAATCACGATGTCACGTTCAATAA
TTATAAGCTCCCACTGACTACACtgcagcatcaaaacaatgataagaaaa
tTTAGTGCACGCTAATTAAATGCATCAGTGTGTTATCAATTTGACATGTT
TCAATACTGGAGTTACGACGTGACATCGTGATTAGGAAATGGTCtattag
gcgaaaataaaaaatgtagtgtttccggaatgcgggtgaaggaaaaaagc
tctcatgcggccggccggaaaactttattttttgcttttttgataaCTTA
GCCCTGAATACTAAGGTATCGACTACTAGCGAACagaacttgatttacaa
gcgggaatatctaaccaaacgacgtttgataagttgaacggtcaacttga
ttttctttatgattaaccatatagatgaaccctTAGTTTGCGGCCGGGTC
ATAAATATTATTAAATTTAGCAGTCGATAATttattctttattatttttc
tgcTTTTAAGAATGCACTGAGAAGAGAAAATTGAAGCGATCGTTAAACGT
CCTCAAAGTATTGACCTGATTCAAAAGCTGAATATACAGTACAAAACGGT
GCTGGTGAAATGACGCCATCATGATTGAGCAACCCCTGCATTTGGCttcc
ggaaaaagaatttaCATCAAATGGTTTAGAGACCAATTTTGGAGGTTAAA
ATCCCTCTGAATCTCTTTCAAGGAAATAAAAGGAAAGGGGGAATCGTGTT
CATTCCTCTCTCAACAATTACAAAATGCAAAGAGTTGTAATGTAATGGTC
ACACAGTTGACACTCAATGAACATCGATTCAATGTTCATAAATGCTTTAC
AAacgttgtttttcattttcgtgaTCAATGGACATATATTTTATcacaaa
gaaatatattttattacaaaatatGATCAAAAGTAGTGTTTATCAATGAA
GGTATAGCTGTAGACTTAAAAAAGACCTGTTAGAATAATGTTAGATTTAT
ACAGGTTAATTccttaaaggccggtctccacttgcgcacgctgcgatcgc
actttttggcttcaatcctttttgcttggaaaaaagattacgtcatgaaa
atGTAG Coding sequence (CDS) from alignment at scaffold_117:65511..77216+ >TCONS_00046764 ID=TCONS_00046764|Name=TCONS_00046764|organism=Clytia hemisphaerica|type=CDS|length=1584bp|location=Sequence derived from alignment at scaffold_117:65511..77216+ (Clytia hemisphaerica)
ATGACTATGGCAAGTGAAAAGAAAGGGAAGAAAAGAAGCTTCAAAAATGA
GGGGCACAAATCGTCAAAGAAGCCTTTCCTAGAGGAGGAggttgaaaata
agattttagcTGATGTTGACCAAGATGAGATTGACGAAGTACTTGCGGCA
CAAGAATTTCCAATGCAAAAAgtatcaaagaaaaagaagaaagaatctGT
AACTGAAGTAGAATCAGAACCAATGGATGGTTCTAATGAGACACCACCAG
CTATTGATTATCTGTTGGGTTGGAAATCTAAAGACAAAGATTGGAAATTT
AGAAAGTTGCGACAAACATGGCTCTTGCAGAATATGTATGATAAAGAAAA
GGTTTCCAAAGCGAACTTTAAGATTTTGTTGGAATACCTGGAAGATTTGA
AAGGTGCAGCTAGAGAACAAACTTTAAAAGAAGCAAAAGAATTTGTTGAA
GCTAACGAGGACAATGaagAATGCACTGAGAAGAGAAAATTGAAGCGATC
GTTAAACGTCCTCAAAGTATTGACCTGAATGACTATGGCAAGTGAAAAGA
AAGGGAAGAAAAGAAGCTTCAAAAATGAGGGGCACAAATCGTCAAAGAAG
CCTTTCCTAGAGGAGGAggttgaaaataagattttagcTGATGTTGACCA
AGATGAGATTGACGAAGTACTTGCGGCACAAGAATTTCCAATGCAAAAAg
tatcaaagaaaaagaagaaagaatctGTAACTGAAGTAGAATCAGAACCA
ATGGATGGTTCTAATGAGACACCACCAGCTATTGATTATCTGTTGGGTTG
GAAATCTAAAGACAAAGATTGGAAATTTAGAAAGTTGCGACAAACATGGC
TCTTGCAGAATATGTATGATAAAGAAAAGGTTTCCAAAGCGAACTTTAAG
ATTTTGTTGGAATACCTGGAAGATTTGAAAGGTGCAGCTAGAGAACAAAC
TTTAAAAGAAGCAAAAGAATTTGTTGAAGCTAACGAGGACAATGaagAAT
GCACTGAGAAGAGAAAATTGAAGCGATCGTTAAACGTCCTCAAAGTATTG
ACCTGAATGACTATGGCAAGTGAAAAGAAAGGGAAGAAAAGAAGCTTCAA
AAATGAGGGGCACAAATCGTCAAAGAAGCCTTTCCTAGAGGAGGAggttg
aaaataagattttagcTGATGTTGACCAAGATGAGATTGACGAAGTACTT
GCGGCACAAGAATTTCCAATGCAAAAAgtatcaaagaaaaagaagaaaga
atctGTAACTGAAGTAGAATCAGAACCAATGGATGGTTCTAATGAGACAC
CACCAGCTATTGATTATCTGTTGGGTTGGAAATCTAAAGACAAAGATTGG
AAATTTAGAAAGTTGCGACAAACATGGCTCTTGCAGAATATGTATGATAA
AGAAAAGGTTTCCAAAGCGAACTTTAAGATTTTGTTGGAATACCTGGAAG
ATTTGAAAGGTGCAGCTAGAGAACAAACTTTAAAAGAAGCAAAAGAATTT
GTTGAAGCTAACGAGGACAATGaagAATGCACTGAGAAGAGAAAATTGAA
GCGATCGTTAAACGTCCTCAAAGTATTGACCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046764-exon-scaffold_117-1491911889:65511..65571 | TCONS_00046764-exon-scaffold_117-1491911889:65511..65571 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1510915933:65511..65571 | TCONS_00046764-exon-scaffold_117-1510915933:65511..65571 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1575043694:65511..65571 | TCONS_00046764-exon-scaffold_117-1575043694:65511..65571 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1491911889:73562..73935 | TCONS_00046764-exon-scaffold_117-1491911889:73562..73935 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1510915933:73562..73935 | TCONS_00046764-exon-scaffold_117-1510915933:73562..73935 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1575043694:73562..73935 | TCONS_00046764-exon-scaffold_117-1575043694:73562..73935 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1491911889:74225..74342 | TCONS_00046764-exon-scaffold_117-1491911889:74225..74342 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1510915933:74225..74342 | TCONS_00046764-exon-scaffold_117-1510915933:74225..74342 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1575043694:74225..74342 | TCONS_00046764-exon-scaffold_117-1575043694:74225..74342 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1491911889:76621..77216 | TCONS_00046764-exon-scaffold_117-1491911889:76621..77216 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1510915933:76621..77216 | TCONS_00046764-exon-scaffold_117-1510915933:76621..77216 | Clytia hemisphaerica | exon |
| TCONS_00046764-exon-scaffold_117-1575043694:76621..77216 | TCONS_00046764-exon-scaffold_117-1575043694:76621..77216 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_117 | supercontig | scaffold_117:65511..77216 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019327 | DUF2373 |
Blast
BLAST of TCONS_00046764 vs. Swiss-Prot (Human)
Match: CG050 (Uncharacterized protein C7orf50 OS=Homo sapiens GN=C7orf50 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.251e-18 Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 334 AIDYLLGWKSKDKDWKFRKLRQTWLLQNMYDKEKVSKANFKILLEYLEDLKGAAREQTLKEAKEFV-EANEDNEECTEKRKLKRSLNVLKVLT 609
A+DYL W K K+W+F+K RQTWLL +MYD +KV +F LL YLE L+G ARE T+++A+ + E +E+ + + +R VL++L+
Sbjct: 102 ALDYLCRWAQKHKNWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLPGRAQRIRQVLQLLS 194
The following BLAST results are available for this feature:
|
